HHsearch alignment for GI: 254780847 and conserved domain: pfam08645

>pfam08645 PNK3P Polynucleotide kinase 3 phosphatase. Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin.

Probab=98.81  E-value=1e-07  Score=70.94  Aligned_cols=47  Identities=23%  Similarity=0.343  Sum_probs=38.1

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCEEEECC---C-------HHHHHHHHHHCCCCEE
Q ss_conf             7770258999998654314889000899738---8-------5788999997699699
Q gi|254780847|r  194 KPHLPIYEMAFKKISSLCNSFNKKRILAIGD---G-------MDTDIKGALQSGIDAL  241 (282)
Q Consensus       194 KP~~~~~~~a~~~l~~~~~~~~~~~~lmIGD---~-------l~tDI~gA~~~G~~si  241 (282)
T Consensus        96 KP~~GM~~~~~~~~~~~-~~iD~~~Sf~vGDaagr~~~~~D~s~sD~~FA~N~gikF~  152 (158)
T pfam08645        96 KPNTGMWDELLEDYNDG-ITIDLEKSFYVGDAAGRPARKKDFSDSDRKFALNVGIKFK  152 (158)
T ss_pred             CCCCHHHHHHHHHCCCC-CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEC
T ss_conf             99736999999972567-5446530189843668877777754037999998598165