HHsearch results for GI: 254780847 and protein with PDBid: 1qyi_A
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=99.58 E-value=1.2e-14 Score=114.92 Aligned_cols=130 Identities=17% Similarity=0.218 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHHCCCCE-EECCCCCCCCC----CCCH--------HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 11799999999997305740-31266432256----6300--------11048999988750476532347770258999
Q gi|254780847|r 137 DKTEDYRMLLERFAHRHIPL-ICANPDIVANR----GNKI--------IPCAGALALIYQQLNGIVKMIGKPHLPIYEMA 203 (282)
Q Consensus 137 ~~~~~~~~l~~~~~~~~~~~-i~~N~D~~~p~----~~~~--------~~~~G~~~~~~~~~~g~~~~~GKP~~~~~~~a 203 (282)
...+..+.+++.+.++|.++ ++||.....-. .-++ +.+.+-.....+ ......-.|||+|.+|..|
T Consensus 215 ~P~~gV~elL~~Lk~~GiklaIvTg~~~~~a~~~L~~lgL~~~Fd~~~ivt~ddv~~~~~-~~~~~~~~~KP~P~~~~~a 293 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAEN-MYPQARPLGKPNPFSYIAA 293 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHH-HSTTSCCCCTTSTHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHCCCCEEECCCCCCCCCC-CCCCCCCCCCCCHHHHHHH
T ss_conf 603759999999998799899988984899999999849854488532431433333423-4654568899896999999
Q ss_pred HHHHHH---------HHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf 998654---------31488900089973885788999997699699971867877784204889889998998608988
Q gi|254780847|r 204 FKKISS---------LCNSFNKKRILAIGDGMDTDIKGALQSGIDALYVSDGIHRHEYLFNDNIDAQMLQNFFTKKNLYP 274 (282)
Q Consensus 204 ~~~l~~---------~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~silV~tG~~~~~~~~~~~~~~~~i~~~~~~~~~~P 274 (282)
+..+.. ....++|++|+||||++. ||.+|+++|+.+|+|+||....+.... + ...-|
T Consensus 294 l~~l~~~~~~~~~~~~~~~v~~~evl~VGDs~~-Di~aAk~AG~~~IgVltG~~~~~~r~~-----------l--e~~gA 359 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLA-DLLSAQKIGATFIGTLTGLKGKDAAGE-----------L--EAHHA 359 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHH-HHHHHHHHTCEEEEESCBTTBGGGHHH-----------H--HHTTC
T ss_pred HHHCCCCHHHHHHHHHHCCCCCCEEEEECCCHH-HHHHHHHCCCEEEEEECCCCCCCCHHH-----------H--HHCCC
T ss_conf 998297057788887615899661899838999-999999859949999058888644779-----------9--87899
Q ss_pred CEECHHH
Q ss_conf 4230421
Q gi|254780847|r 275 HWWIQQL 281 (282)
Q Consensus 275 ~~~~~~l 281 (282)
+|+++++
T Consensus 360 D~Iidsi 366 (384)
T 1qyi_A 360 DYVINHL 366 (384)
T ss_dssp SEEESSG
T ss_pred CEEECCH
T ss_conf 9997999