HHsearch results for GI: 254780847 and protein with PDBid: 3ed5_A
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.64 E-value=7.6e-18 Score=135.91 Aligned_cols=116 Identities=20% Similarity=0.334 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 99999999973057403126643225663001104899998875-04765323477702589999986543148890008
Q gi|254780847|r 141 DYRMLLERFAHRHIPLICANPDIVANRGNKIIPCAGALALIYQQ-LNGIVKMIGKPHLPIYEMAFKKISSLCNSFNKKRI 219 (282)
Q Consensus 141 ~~~~l~~~~~~~~~~~i~~N~D~~~p~~~~~~~~~G~~~~~~~~-~~g~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~ 219 (282)
+...+++.+.+++...++||.+...... ..-..| +...+.. ........+||+|.+|+.|++++. +++|++|
T Consensus 107 ~~~~~l~~l~~~~~~~~~tn~~~~~~~~--~l~~~~-l~~~fd~i~~s~~~~~~KP~~~~f~~~~~~l~----~~~p~~~ 179 (238)
T 3ed5_A 107 GAFDLISNLQQQFDLYIVTNGVSHTQYK--RLRDSG-LFPFFKDIFVSEDTGFQKPMKEYFNYVFERIP----QFSAEHT 179 (238)
T ss_dssp THHHHHHHHHTTSEEEEEECSCHHHHHH--HHHHTT-CGGGCSEEEEGGGTTSCTTCHHHHHHHHHTST----TCCGGGE
T ss_pred CHHHHHHHHHHCCCEEEECCCCHHHHHH--HHHHHH-HCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHC----CCCCCCE
T ss_conf 6999999998389876543888999999--998623-20001222110100367971999999999844----7898867
Q ss_pred EEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCEECHHH
Q ss_conf 99738857889999976996999718678777842048898899989986089884230421
Q gi|254780847|r 220 LAIGDGMDTDIKGALQSGIDALYVSDGIHRHEYLFNDNIDAQMLQNFFTKKNLYPHWWIQQL 281 (282)
Q Consensus 220 lmIGD~l~tDI~gA~~~G~~silV~tG~~~~~~~~~~~~~~~~i~~~~~~~~~~P~~~~~~l 281 (282)
+||||++.+||.+|+++||+||||.+|..... .+..|+|++.+|
T Consensus 180 l~vGD~~~~Di~~A~~~G~~ti~v~~~~~~~~------------------~~~~~~~~i~~l 223 (238)
T 3ed5_A 180 LIIGDSLTADIKGGQLAGLDTCWMNPDMKPNV------------------PEIIPTYEIRKL 223 (238)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEECTTCCCCT------------------TCCCCSEEESSG
T ss_pred EEEEECCHHHHHHHHHCCCEEEEECCCCCCCC------------------CCCCCCEEECCH
T ss_conf 99997968879999984997999899998873------------------126999898999