HHsearch results for GI: 254780847 and protein with PDBid: 3kc2_A
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomics, protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=0 Score=363.20 Aligned_cols=256 Identities=21% Similarity=0.279 Sum_probs=204.0
Q ss_pred CCHHHHHHCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHH-HCCCCCHHCCCCCCH
Q ss_conf 7579998417999992744323188148627999999998798199985989-99589999875-127770000135687
Q gi|254780847|r 6 TSLRTILPYYDVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTNSP-RPSASVISQIQ-SLGSSSQFWDDIITS 83 (282)
Q Consensus 6 ~~~~~i~~~yd~~lfD~DGvL~~g~~~ipgA~e~l~~L~~~g~~~~~lTN~s-~~~~~~~~~L~-~lG~~~~~~d~I~ts 83 (282)
+++.+..++|.+|+||+|||||+|+++||||.|+|++|++.|++++|||||| +++++++++|. .||+++. +++|+||
T Consensus 4 ~~~~~~~~~~~aflfDidGVL~~g~~~ipgA~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~lG~~v~-~~~iits 82 (352)
T 3kc2_A 4 KRFFQTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVS-PLQIIQS 82 (352)
T ss_dssp --------CCEEEEECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCC-GGGEECT
T ss_pred HHHHHHCCCCCEEEEECCCEEEECCEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC-HHHHHHH
T ss_conf 033330140678999688700889982846999999999879908999489999999999999985599988-8996309
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCC----------------------------------CCCCCCCEEEE
Q ss_conf 99999999853165454387252124311797315----------------------------------75567868998
Q gi|254780847|r 84 GDLTHHLLVEESHNIFFIGPQRDYALLEKLNIKIV----------------------------------NEQHAETILCT 129 (282)
Q Consensus 84 ~~~~~~~l~~~~~~v~viG~~~~~~~l~~~g~~~~----------------------------------~~~~~~~iv~~ 129 (282)
+.+++.|++. .++++++|+.++.++++..|+..+ ..++.+.++ +
T Consensus 83 ~~~~~~~l~~-~~~v~v~G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v 160 (352)
T 3kc2_A 83 HTPYKSLVNK-YSRILAVGTPSVRGVAEGYGFQDVVHQTDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVL-V 160 (352)
T ss_dssp TGGGGGGTTT-CSEEEEESSTTHHHHHHHHTCSEEEEHHHHHHHCGGGCTTCCCCHHHHHHHCCCCTTTTTSCCCEEE-E
T ss_pred HHHHHHHHHH-CCCEEEECCHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEE-E
T ss_conf 9999999973-8968998958899999973972135726766506663663334667665530453213556888899-8
Q ss_pred ECCCCCCCCHHHHHHHHHHH---------------HHCCCCEEECCCCCCCCCCCCH-HHHHH----HHHHHHHHHCC--
Q ss_conf 43771001179999999999---------------7305740312664322566300-11048----99998875047--
Q gi|254780847|r 130 GLYDDEKDKTEDYRMLLERF---------------AHRHIPLICANPDIVANRGNKI-IPCAG----ALALIYQQLNG-- 187 (282)
Q Consensus 130 g~~~~~~~~~~~~~~l~~~~---------------~~~~~~~i~~N~D~~~p~~~~~-~~~~G----~~~~~~~~~~g-- 187 (282)
..+..+|..+.+..++.+ .++++|++++|||.++|.+.+. .+++| ++.++++.++|
T Consensus 161 --~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~n~D~~~p~~~~~~~~g~~~~~~~i~~~~~~~~g~~ 238 (352)
T 3kc2_A 161 --FNDPHDWAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELNGEP 238 (352)
T ss_dssp --CSCCSCHHHHHHHHHHHHTSBTTBTTCCCSCCCSSCSSCEEESCCCSEECCSSSSCEECHHHHHHHHHHHHHHHHSSC
T ss_pred --CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf --178753399999999998706752111233442068980899778826536898887751868999999999974998
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHHH----------------------HCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEC
Q ss_conf -65323477702589999986543----------------------1488900089973885788999997699699971
Q gi|254780847|r 188 -IVKMIGKPHLPIYEMAFKKISSL----------------------CNSFNKKRILAIGDGMDTDIKGALQSGIDALYVS 244 (282)
Q Consensus 188 -~~~~~GKP~~~~~~~a~~~l~~~----------------------~~~~~~~~~lmIGD~l~tDI~gA~~~G~~silV~ 244 (282)
++.++|||+|.+|++|++.+... ....++++++||||+++|||+||+++||+|+||+
T Consensus 239 ~~~~~~GKP~~~~~e~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~mIGD~l~TDI~gA~~~G~~SvLV~ 318 (352)
T 3kc2_A 239 LQDYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVK 318 (352)
T ss_dssp CCCEECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECS
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEC
T ss_conf 85499769998999999999855443210122222110010000123578855389978985899999998699899989
Q ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCEECHHH
Q ss_conf 8678777842048898899989986089884230421
Q gi|254780847|r 245 DGIHRHEYLFNDNIDAQMLQNFFTKKNLYPHWWIQQL 281 (282)
Q Consensus 245 tG~~~~~~~~~~~~~~~~i~~~~~~~~~~P~~~~~~l 281 (282)
||+|++++.. ....|||+++++
T Consensus 319 TGv~~~~d~~---------------~~~~Pd~v~d~~ 340 (352)
T 3kc2_A 319 TGVYNEGDDL---------------KECKPTLIVNDV 340 (352)
T ss_dssp SSSCCTTCCC---------------TTCCCSEECSSH
T ss_pred CCCCCCCCCC---------------CCCCCCEEECCH
T ss_conf 8898964457---------------678999984999