HHsearch results for GI: 254780847 and protein with PDBid: 3pdw_A
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-40 Score=285.52 Aligned_cols=245 Identities=21% Similarity=0.342 Sum_probs=200.2
Q ss_pred HHCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHH
Q ss_conf 8417999992744323188148627999999998798199985989-995899998751277700001356879999999
Q gi|254780847|r 12 LPYYDVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTNSP-RPSASVISQIQSLGSSSQFWDDIITSGDLTHHL 90 (282)
Q Consensus 12 ~~~yd~~lfD~DGvL~~g~~~ipgA~e~l~~L~~~g~~~~~lTN~s-~~~~~~~~~L~~lG~~~~~~d~I~ts~~~~~~~ 90 (282)
+.+||+++||+|||||++.++||+|.++|++|+++|++++|+|||| ++++++.++|.++|++.. ..++++++..+..+
T Consensus 3 m~~ykavlfDlDGTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TNns~~~~~~~~~~L~~~gi~~~-~~~~~~~~~~~~~~ 81 (266)
T 3pdw_A 3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT-EEQVFTTSMATAQH 81 (266)
T ss_dssp CCCCSEEEEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC-GGGEEEHHHHHHHH
T ss_pred CCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC-HHEEEECHHHHHHH
T ss_conf 77798999989984377995781199999999976998899948999999999999974698643-11256318999999
Q ss_pred HHHHC--CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
Q ss_conf 98531--6545438725212431179731575567868998437710011799999999997305740312664322566
Q gi|254780847|r 91 LVEES--HNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTGLYDDEKDKTEDYRMLLERFAHRHIPLICANPDIVANRG 168 (282)
Q Consensus 91 l~~~~--~~v~viG~~~~~~~l~~~g~~~~~~~~~~~iv~~g~~~~~~~~~~~~~~l~~~~~~~~~~~i~~N~D~~~p~~ 168 (282)
+.... +++++++.+.+...+...+..... +++.. ++.+.... .........+ ....+++++++++.+..++..
T Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 156 (266)
T 3pdw_A 82 IAQQKKDASVYVIGEEGIRQAIEENGLTFGG-ENADF-VVVGIDRS--ITYEKFAVGC-LAIRNGARFISTNGDIAIPTE 156 (266)
T ss_dssp HHHHCTTCEEEEESCHHHHHHHHHTTCEECC-TTCSE-EEECCCTT--CCHHHHHHHH-HHHHTTCEEEESCCCCEEEET
T ss_pred HHHHCCCCCEEECCCHHHHHHHHHCCCCCCC-CCCCE-EEECCCCC--CCHHHHHHHH-HHHCCCCCEECCCCCCEEECC
T ss_conf 9975589842203757799999982982246-67767-99716543--6889999999-986079720303787144214
Q ss_pred CCHHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 3001104899998875047-653234777025899999865431488900089973885788999997699699971867
Q gi|254780847|r 169 NKIIPCAGALALIYQQLNG-IVKMIGKPHLPIYEMAFKKISSLCNSFNKKRILAIGDGMDTDIKGALQSGIDALYVSDGI 247 (282)
Q Consensus 169 ~~~~~~~G~~~~~~~~~~g-~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~silV~tG~ 247 (282)
++..+++|.+...++.+.+ +...+|||+|.+|+.|++++ +++|++|+||||++++||.||+++||+|+||.||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a~~~l-----gi~pe~~l~IGD~~~~DI~~a~~aG~~si~V~~G~ 231 (266)
T 3pdw_A 157 RGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVL-----GTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGV 231 (266)
T ss_dssp TEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHH-----TCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC-
T ss_pred CCEECCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHH-----CCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCC
T ss_conf 7502147763148996068641231376347899989885-----14754369982581778999998799699989998
Q ss_pred CCHHHHHHCCCCHHHHHHHHHHCCCCCCEECHHH
Q ss_conf 8777842048898899989986089884230421
Q gi|254780847|r 248 HRHEYLFNDNIDAQMLQNFFTKKNLYPHWWIQQL 281 (282)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~~~~~~~~P~~~~~~l 281 (282)
++.+..... ...|||++++|
T Consensus 232 ~~~~~~~~~--------------~~~pd~vi~sl 251 (266)
T 3pdw_A 232 TKREHMTDD--------------MEKPTHAIDSL 251 (266)
T ss_dssp -----CCTT--------------SCCCSEEESSG
T ss_pred CCHHHHHCC--------------CCCCCEEECCH
T ss_conf 996785433--------------78998998999