HHsearch results for GI: 254780847 and protein with PDBid: 3pdw_A

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis}
Probab=100.00  E-value=1.2e-40  Score=285.52  Aligned_cols=245  Identities=21%  Similarity=0.342  Sum_probs=200.2

Q ss_pred             HHCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHH
Q ss_conf             8417999992744323188148627999999998798199985989-995899998751277700001356879999999
Q gi|254780847|r   12 LPYYDVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTNSP-RPSASVISQIQSLGSSSQFWDDIITSGDLTHHL   90 (282)
Q Consensus        12 ~~~yd~~lfD~DGvL~~g~~~ipgA~e~l~~L~~~g~~~~~lTN~s-~~~~~~~~~L~~lG~~~~~~d~I~ts~~~~~~~   90 (282)
                      +.+||+++||+|||||++.++||+|.++|++|+++|++++|+|||| ++++++.++|.++|++.. ..++++++..+..+
T Consensus         3 m~~ykavlfDlDGTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TNns~~~~~~~~~~L~~~gi~~~-~~~~~~~~~~~~~~   81 (266)
T 3pdw_A            3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT-EEQVFTTSMATAQH   81 (266)
T ss_dssp             CCCCSEEEEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC-GGGEEEHHHHHHHH
T ss_pred             CCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC-HHEEEECHHHHHHH
T ss_conf             77798999989984377995781199999999976998899948999999999999974698643-11256318999999


Q ss_pred             HHHHC--CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
Q ss_conf             98531--6545438725212431179731575567868998437710011799999999997305740312664322566
Q gi|254780847|r   91 LVEES--HNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTGLYDDEKDKTEDYRMLLERFAHRHIPLICANPDIVANRG  168 (282)
Q Consensus        91 l~~~~--~~v~viG~~~~~~~l~~~g~~~~~~~~~~~iv~~g~~~~~~~~~~~~~~l~~~~~~~~~~~i~~N~D~~~p~~  168 (282)
                      +....  +++++++.+.+...+...+..... +++.. ++.+....  .........+ ....+++++++++.+..++..
T Consensus        82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  156 (266)
T 3pdw_A           82 IAQQKKDASVYVIGEEGIRQAIEENGLTFGG-ENADF-VVVGIDRS--ITYEKFAVGC-LAIRNGARFISTNGDIAIPTE  156 (266)
T ss_dssp             HHHHCTTCEEEEESCHHHHHHHHHTTCEECC-TTCSE-EEECCCTT--CCHHHHHHHH-HHHHTTCEEEESCCCCEEEET
T ss_pred             HHHHCCCCCEEECCCHHHHHHHHHCCCCCCC-CCCCE-EEECCCCC--CCHHHHHHHH-HHHCCCCCEECCCCCCEEECC
T ss_conf             9975589842203757799999982982246-67767-99716543--6889999999-986079720303787144214


Q ss_pred             CCHHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             3001104899998875047-653234777025899999865431488900089973885788999997699699971867
Q gi|254780847|r  169 NKIIPCAGALALIYQQLNG-IVKMIGKPHLPIYEMAFKKISSLCNSFNKKRILAIGDGMDTDIKGALQSGIDALYVSDGI  247 (282)
Q Consensus       169 ~~~~~~~G~~~~~~~~~~g-~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~silV~tG~  247 (282)
                      ++..+++|.+...++.+.+ +...+|||+|.+|+.|++++     +++|++|+||||++++||.||+++||+|+||.||+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a~~~l-----gi~pe~~l~IGD~~~~DI~~a~~aG~~si~V~~G~  231 (266)
T 3pdw_A          157 RGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVL-----GTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGV  231 (266)
T ss_dssp             TEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHH-----TCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC-
T ss_pred             CCEECCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHH-----CCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCC
T ss_conf             7502147763148996068641231376347899989885-----14754369982581778999998799699989998


Q ss_pred             CCHHHHHHCCCCHHHHHHHHHHCCCCCCEECHHH
Q ss_conf             8777842048898899989986089884230421
Q gi|254780847|r  248 HRHEYLFNDNIDAQMLQNFFTKKNLYPHWWIQQL  281 (282)
Q Consensus       248 ~~~~~~~~~~~~~~~i~~~~~~~~~~P~~~~~~l  281 (282)
                      ++.+.....              ...|||++++|
T Consensus       232 ~~~~~~~~~--------------~~~pd~vi~sl  251 (266)
T 3pdw_A          232 TKREHMTDD--------------MEKPTHAIDSL  251 (266)
T ss_dssp             -----CCTT--------------SCCCSEEESSG
T ss_pred             CCHHHHHCC--------------CCCCCEEECCH
T ss_conf             996785433--------------78998998999