RPSBLAST alignment for GI: 254780847 and conserved domain: TIGR01457
>gnl|CDD|130524 TIGR01457, HAD-SF-IIA-hyp2, HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. Length = 249
Score = 52.9 bits (127), Expect = 8e-08
Identities = 53/255 (20%), Positives = 109/255 (42%), Gaps = 29/255 (11%)
Query: 15 YDVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTN----SPRPSASVISQIQSL 70
Y L D+ G ++ G++ +P + E ++ + + TN +P A +++
Sbjct: 1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60
Query: 71 GSSSQFWDDIITSGDLTHHLLVEESHNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTG 130
+ + + + D + L +E++ ++ IG + +++ E+ ++ G
Sbjct: 61 ATLETVFTASMATADYMNDLKLEKT--VYVIGEEGLKEAIKEAGYVEDKEKPDYVVV--G 116
Query: 131 LYDDEKDKTEDYRMLLERFA------HRHIPLICANPDIVANRGNKIIPCAGALALIYQQ 184
L D+ DY E+FA + I N D+ ++P G+L + +
Sbjct: 117 L-----DRQIDY----EKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGNGSLITVLEV 167
Query: 185 LNGIVKM-IGKPHLPIYEMAFKKISSLCNSFNKKRILAIGDGMDTDIKGALQSGIDALYV 243
G+ + IGKP+ I E A + + + ++ L +GD TDI+ + +GID L V
Sbjct: 168 ATGVKPVYIGKPNAIIMEKAVEHLGT-----EREETLMVGDNYLTDIRAGIDAGIDTLLV 222
Query: 244 SDGIHRHEYLFNDNI 258
G+ + E + I
Sbjct: 223 HTGVTKAEEVAGLPI 237