Query gi|254780848|ref|YP_003065261.1| co-chaperonin GroES [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 111
No_of_seqs 103 out of 1601
Neff 6.2
Searched_HMMs 33803
Date Wed Jun 1 17:25:37 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780848.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1we3_O CPN10(groes); chaperon 100.0 4.3E-32 1.3E-36 198.5 8.9 100 2-105 1-100 (100)
2 >1pcq_O Groes protein; chapero 100.0 4.3E-31 1.3E-35 193.0 9.7 95 7-105 1-96 (97)
3 >1p3h_A 10 kDa chaperonin; bet 100.0 1.6E-30 4.8E-35 189.7 12.0 98 5-106 1-99 (99)
4 >1g31_A GP31; chaperone, CO-ch 95.5 0.017 5.1E-07 33.9 4.1 92 4-104 4-110 (111)
5 >1vj0_A Alcohol dehydrogenase, 90.1 0.31 9.2E-06 26.9 3.5 30 46-79 40-69 (192)
6 >3fbg_A Putative arginate lyas 89.8 0.83 2.4E-05 24.5 5.4 75 10-102 29-112 (189)
7 >3gaz_A Alcohol dehydrogenase 88.1 0.67 2E-05 25.0 4.0 48 45-103 71-119 (164)
8 >1h2b_A Alcohol dehydrogenase; 87.1 0.71 2.1E-05 24.9 3.7 48 46-103 82-151 (216)
9 >1zsy_A Mitochondrial 2-enoyl 86.8 1.3 3.8E-05 23.4 4.9 77 10-104 51-137 (202)
10 >1qor_A Quinone oxidoreductase 85.7 1.2 3.6E-05 23.5 4.3 79 8-102 23-108 (195)
11 >1gu7_A 2,4-dienoyl-COA reduct 84.4 2 5.8E-05 22.4 4.8 44 45-103 80-124 (183)
12 >3goh_A Alcohol dehydrogenase, 83.6 1.3 3.9E-05 23.4 3.7 78 10-103 26-112 (201)
13 >3gms_A Putative NADPH:quinone 82.8 2.6 7.6E-05 21.8 4.9 44 45-103 70-113 (191)
14 >1f8f_A Benzyl alcohol dehydro 82.6 0.98 2.9E-05 24.1 2.7 23 46-77 68-90 (220)
15 >1e3i_A Alcohol dehydrogenase, 80.7 1.5 4.5E-05 23.0 3.1 59 10-78 30-93 (223)
16 >2dph_A Formaldehyde dismutase 80.6 1.3 3.9E-05 23.4 2.8 24 46-78 69-92 (224)
17 >3fpc_A NADP-dependent alcohol 80.6 1.5 4.6E-05 23.0 3.1 87 9-108 20-140 (199)
18 >3jyn_A Quinone oxidoreductase 79.2 1.5 4.4E-05 23.1 2.7 77 10-102 25-108 (193)
19 >1jvb_A NAD(H)-dependent alcoh 79.1 1.4 4.2E-05 23.2 2.5 53 45-107 70-144 (198)
20 >1yqd_A Sinapyl alcohol dehydr 79.1 0.94 2.8E-05 24.2 1.6 49 46-105 79-130 (166)
21 >1o89_A YHDH, B3253, YHDH; str 78.9 1.9 5.7E-05 22.5 3.2 46 46-103 87-133 (173)
22 >2vn8_A Reticulon-4-interactin 78.1 3.1 9.3E-05 21.3 4.1 43 46-103 103-148 (203)
23 >1kol_A Formaldehyde dehydroge 78.1 1.4 4.3E-05 23.2 2.3 24 46-78 70-93 (223)
24 >1pl8_A Human sorbitol dehydro 77.6 1.7 4.9E-05 22.8 2.5 85 10-104 28-143 (184)
25 >3gqv_A Enoyl reductase; mediu 77.5 1.8 5.2E-05 22.7 2.6 81 10-102 33-120 (215)
26 >2h6e_A ADH-4, D-arabinose 1-d 77.2 2.9 8.5E-05 21.5 3.7 86 9-107 24-140 (176)
27 >1wly_A CAAR, 2-haloacrylate r 76.6 2 5.9E-05 22.4 2.7 78 10-103 25-112 (201)
28 >2c0c_A Zinc binding alcohol d 76.4 4.1 0.00012 20.7 4.2 76 10-103 50-134 (183)
29 >1cdo_A Alcohol dehydrogenase; 73.9 3.2 9.3E-05 21.3 3.1 23 46-77 71-93 (220)
30 >2dq4_A L-threonine 3-dehydrog 73.1 4.4 0.00013 20.5 3.7 87 9-106 21-138 (172)
31 >1p0f_A NADP-dependent alcohol 72.9 3.4 0.0001 21.1 3.1 23 46-77 71-93 (219)
32 >1piw_A Hypothetical zinc-type 71.3 3.4 9.9E-05 21.1 2.8 25 46-78 71-95 (197)
33 >2j8z_A Quinone oxidoreductase 71.3 7.5 0.00022 19.2 5.4 80 9-103 45-131 (223)
34 >3krt_A Crotonyl COA reductase 70.5 4.4 0.00013 20.5 3.3 50 46-104 126-196 (272)
35 >2fzw_A Alcohol dehydrogenase 68.8 4.8 0.00014 20.3 3.1 55 10-77 28-91 (218)
36 >1e3j_A NADP(H)-dependent keto 67.7 4.2 0.00013 20.6 2.7 86 9-104 24-140 (179)
37 >1llu_A Alcohol dehydrogenase; 67.2 4.4 0.00013 20.5 2.7 83 10-105 28-142 (179)
38 >2cf5_A Atccad5, CAD, cinnamyl 66.4 4.8 0.00014 20.2 2.8 25 46-79 40-64 (128)
39 >2cdc_A Glucose dehydrogenase 66.1 7.3 0.00022 19.3 3.6 46 46-103 69-138 (175)
40 >1xa0_A Putative NADPH depende 66.0 5.9 0.00017 19.8 3.1 46 46-103 69-115 (156)
41 >3ip1_A Alcohol dehydrogenase, 65.1 6.1 0.00018 19.7 3.1 54 46-103 100-175 (221)
42 >2jhf_A Alcohol dehydrogenase 64.7 5.3 0.00016 20.0 2.7 23 46-77 70-92 (219)
43 >1rjw_A ADH-HT, alcohol dehydr 62.0 5.4 0.00016 20.0 2.3 84 8-103 20-134 (177)
44 >2eih_A Alcohol dehydrogenase; 61.2 11 0.00032 18.3 3.7 82 9-103 23-135 (198)
45 >1uuf_A YAHK, zinc-type alcoho 60.0 7.3 0.00022 19.2 2.7 23 46-77 85-107 (226)
46 >1t9h_A YLOQ, probable GTPase 60.0 13 0.00038 17.9 5.2 39 44-82 10-65 (75)
47 >2d8a_A PH0655, probable L-thr 59.5 7.4 0.00022 19.2 2.7 86 10-105 26-141 (179)
48 >1rc6_A Hypothetical protein Y 57.4 13 0.00039 17.8 3.7 36 45-82 79-114 (139)
49 >2hcy_A Alcohol dehydrogenase 51.9 10 0.0003 18.5 2.3 82 9-103 26-139 (180)
50 >1yb5_A Quinone oxidoreductase 50.1 14 0.0004 17.8 2.8 42 46-102 96-138 (186)
51 >2b5w_A Glucose dehydrogenase; 44.6 17 0.00049 17.2 2.5 48 46-104 66-139 (172)
52 >1dfa_A PI-SCEI endonuclease; 41.3 9.6 0.00028 18.6 0.9 40 47-93 5-45 (67)
53 >2eyq_A TRCF, transcription-re 36.9 31 0.00091 15.8 3.6 34 66-99 19-59 (85)
54 >2dgy_A MGC11102 protein; EIF- 35.4 11 0.00033 18.2 0.5 22 65-86 51-73 (111)
55 >2vsm_A NIV-G, hemagglutinin-n 32.1 19 0.00057 16.9 1.2 16 68-83 81-96 (228)
56 >2oqk_A Putative translation i 28.8 17 0.00051 17.2 0.5 51 44-96 33-97 (117)
57 >1d7q_A Translation initiation 28.6 33 0.00098 15.6 1.9 29 66-96 68-96 (143)
58 >1u0l_A Probable GTPase ENGC; 27.9 44 0.0013 14.9 4.8 37 44-80 10-61 (73)
59 >2ot2_A Hydrogenase isoenzymes 26.3 33 0.00097 15.6 1.6 12 67-78 41-52 (75)
60 >1v3e_A Hemagglutinin-neuramin 26.0 28 0.00083 16.0 1.2 30 46-87 64-93 (225)
61 >2vv5_A MSCS, small-conductanc 24.4 51 0.0015 14.5 2.6 29 67-97 19-47 (71)
62 >2vz8_A Fatty acid synthase; t 23.1 17 0.00051 17.2 -0.3 15 67-81 87-102 (181)
63 >3d3r_A Hydrogenase assembly c 21.8 46 0.0014 14.8 1.6 31 47-77 28-69 (73)
64 >7odc_A Protein (ornithine dec 21.7 53 0.0016 14.4 1.9 51 49-99 134-194 (205)
65 >2z1c_A Hydrogenase expression 21.4 59 0.0017 14.2 3.5 32 47-78 7-46 (75)
66 >3l4y_A Maltase-glucoamylase, 21.0 54 0.0016 14.4 1.8 27 11-38 25-51 (83)
67 >1e8u_A HN, hemagglutinin-neur 20.1 43 0.0013 14.9 1.2 14 69-82 184-197 (454)
No 1
>>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} (O:)
Probab=99.97 E-value=4.3e-32 Score=198.48 Aligned_cols=100 Identities=43% Similarity=0.808 Sum_probs=93.1
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC
Q ss_conf 86523242517847999974754212255799457655465302479998238708678879022031378899705686
Q gi|254780848|r 2 VGEHKNYLRPTRGRVVVRRLQSEIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG 81 (111)
Q Consensus 2 ~~~~~~~ikPl~drVLVk~~~~e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g 81 (111)
++..+|+|+||+|||||++.+++++|+ |||+||+++++++ ++|+|+|||||+++.+|+.+|+++++||+|+|++|+|
T Consensus 1 a~~~~~~i~PL~DrVLV~~~e~e~~T~-gGI~Lp~~~~~k~--~~G~VvAvG~g~~~~~G~~~p~~vk~GD~Vlf~~~~g 77 (100)
T 1we3_O 1 AAEVKTVIKPLGDRVVVKRIEEEPKTK-GGIVLPDTAKEKP--QKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGG 77 (100)
T ss_dssp ----CCCEEECTTCEEEEECCCCSSCT-TCCCCCTTTSCCC--SEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCS
T ss_pred CHHHCCCCEECCCEEEEEECCCCCEEE-CCEEECCCCCCCE--EEEEEEEECCCEECCCCCEECCEEEECCEEEECCCCC
T ss_conf 922525751068999998754033011-5369765014440--6889998546178588989677887488999846787
Q ss_pred CEEEECCCCEEEEEEHHHEEEEEE
Q ss_conf 088976997799985301789984
Q gi|254780848|r 82 TEIKLNDGEEYLVMQESDIMGIVV 105 (111)
Q Consensus 82 ~~v~~~dg~~y~i~~e~dIlavi~ 105 (111)
+++++ ||++|+|++++||||+++
T Consensus 78 ~ev~~-~~~~y~ii~~~DIla~ie 100 (100)
T 1we3_O 78 TEIEI-DGEEYVILSERDLLAVLQ 100 (100)
T ss_dssp EEEEC-SSCEEEEECTTTEEEEEC
T ss_pred CEEEE-CCEEEEEEEHHHEEEEEC
T ss_conf 29999-999999999799799959
No 2
>>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} (O:)
Probab=99.97 E-value=4.3e-31 Score=192.95 Aligned_cols=95 Identities=38% Similarity=0.617 Sum_probs=88.8
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEE-
Q ss_conf 2425178479999747542122557994576554653024799982387086788790220313788997056860889-
Q gi|254780848|r 7 NYLRPTRGRVVVRRLQSEIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIK- 85 (111)
Q Consensus 7 ~~ikPl~drVLVk~~~~e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~- 85 (111)
|+|+||+|||||++.+++++|++ ||+||+++++++ +.|+|+|||||+++.+|+.+|++|++||+|+|++|+|+++.
T Consensus 1 m~i~Pl~DrVLV~~~~~e~~T~g-Gi~Lp~s~~ek~--~~G~ViAvG~G~~~~~g~~~p~~Vk~GD~Vl~~~~~G~ei~~ 77 (97)
T 1pcq_O 1 MNIRPLHDRVIVKRKEVETKSAG-GIVLTGSAAAKS--TRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEK 77 (97)
T ss_dssp CEEEECSSEEEEEECCTTCTTTT-SSCCCCCCSCCC--CEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEE
T ss_pred CCCEECCCEEEEEECCCCCEECC-EEEECCCCCCCC--EEEEEEEECCCEECCCCCCCCCCCCCCCEEEECCCCCCCEEE
T ss_conf 98328699899988641767644-599676324574--057999986847957998922616999999983655863797
Q ss_pred ECCCCEEEEEEHHHEEEEEE
Q ss_conf 76997799985301789984
Q gi|254780848|r 86 LNDGEEYLVMQESDIMGIVV 105 (111)
Q Consensus 86 ~~dg~~y~i~~e~dIlavi~ 105 (111)
+ ||++|+|++++||||+++
T Consensus 78 ~-~~~~y~ii~~~DIlavie 96 (97)
T 1pcq_O 78 I-DNEEVLIMSESDILAIVE 96 (97)
T ss_dssp E-TTEEEEEEEGGGEEEEEE
T ss_pred E-CCEEEEEEEHHHEEEEEE
T ss_conf 8-997999999788799995
No 3
>>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} (A:)
Probab=99.97 E-value=1.6e-30 Score=189.74 Aligned_cols=98 Identities=38% Similarity=0.714 Sum_probs=89.3
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCC-CCEECCEECCCCEEEEECCCCCE
Q ss_conf 23242517847999974754212255799457655465302479998238708678-87902203137889970568608
Q gi|254780848|r 5 HKNYLRPTRGRVVVRRLQSEIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQS-GKVIEPEVSKGDIVLFGKWSGTE 83 (111)
Q Consensus 5 ~~~~ikPl~drVLVk~~~~e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~-G~~~p~~vkvGD~Vl~~~~~g~~ 83 (111)
.+|+|+||||||||++.+.+++|+ ||||||+++++++ ++|+|+|||||+.+.+ +...|+++++||+|+|++|+|++
T Consensus 1 ~~~~i~Pl~DrVLV~~~~~~~~T~-gGI~Lp~~~~~k~--~~G~ViaVG~g~~~~~~~~~~~~~vkvGD~Vlf~~~~g~e 77 (99)
T 1p3h_A 1 AKVNIKPLEDKILVQANEAETTTA-SGLVIPDTAKEKP--QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTE 77 (99)
T ss_dssp CCCEEEECTTEEEEEECCCCCBCT-TSCBCCCSSCCSE--EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEE
T ss_pred CCCCCEECCCEEEEEECCCCCEEE-CEEEECHHHCCCC--EEEEEEEECCCEEECCCCEECCCEEECCCEEEECCCCCEE
T ss_conf 974347868999999853055331-2299880670570--5899999756178079989468776269899980448619
Q ss_pred EEECCCCEEEEEEHHHEEEEEEC
Q ss_conf 89769977999853017899845
Q gi|254780848|r 84 IKLNDGEEYLVMQESDIMGIVVE 106 (111)
Q Consensus 84 v~~~dg~~y~i~~e~dIlavi~~ 106 (111)
+++ ||++|+|++++||||++++
T Consensus 78 v~~-~~~~y~iv~~~DIlAviee 99 (99)
T 1p3h_A 78 IKY-NGEEYLILSARDVLAVVSK 99 (99)
T ss_dssp EEE-TTEEEEEEEGGGEEEEEEC
T ss_pred EEE-CCEEEEEEEHHHEEEEEEC
T ss_conf 999-9999999997878999959
No 4
>>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} (A:)
Probab=95.49 E-value=0.017 Score=33.87 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=58.7
Q ss_pred CCCCCCCCCCCEEEEEECCC----CCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 52324251784799997475----42122557994576554653024799982387086788790220313788997056
Q gi|254780848|r 4 EHKNYLRPTRGRVVVRRLQS----EIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 4 ~~~~~ikPl~drVLVk~~~~----e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-.-..++.+++.|++....+ |.++.+| |++--..|- .-...|+|++|||..... -+++|+.|+.+.-
T Consensus 4 ms~L~~kA~~eyVIi~~~a~~aG~Ei~S~~G-iiigkr~qG-EiPl~g~viSVG~dVpe~-------~~k~G~~v~LP~G 74 (111)
T 1g31_A 4 VQQLPIRAVGEYVILVSEPAQAGDEEVTESG-LIIGKRVQG-EVPELCVVHSVGPDVPEG-------FCEVGDLTSLPVG 74 (111)
T ss_dssp -CCCSCEECTTEEEEEECSSCGGGCTTSCTT-CCCCHHHHH-HSEEEEEEEEECTTSCTT-------SCCTTCEEEEEGG
T ss_pred HHHCCHHHHCEEEEEECCCCCCCCHHHHCCC-EEEEEEECC-CCCCEEEEEECCCCCCCC-------CEEECCCCCCCCH
T ss_conf 6647521001089996170204560210034-078422147-788537885038998745-------0130550234422
Q ss_pred CCCEEEE----------C-CCCEEEEEEHHHEEEEE
Q ss_conf 8608897----------6-99779998530178998
Q gi|254780848|r 80 SGTEIKL----------N-DGEEYLVMQESDIMGIV 104 (111)
Q Consensus 80 ~g~~v~~----------~-dg~~y~i~~e~dIlavi 104 (111)
.=.++.. . --..|..++...|-++.
T Consensus 75 ~m~NVPdP~~~~G~~~~~~~r~k~vt~HyK~I~~iY 110 (111)
T 1g31_A 75 QIRNVPHPFVALGLKQPKEIKQKFVTCHYKAIPCLY 110 (111)
T ss_dssp GCEEECCHHHHTTSSCGGGCCCCEEEEEGGGCCEEC
T ss_pred HHCCCCCCHHHHCCCCCHHHHHHEEEEECCCCCCCC
T ss_conf 221699726553158828876340363111111104
No 5
>>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} (A:41-178,A:327-380)
Probab=90.14 E-value=0.31 Score=26.86 Aligned_cols=30 Identities=20% Similarity=0.452 Sum_probs=23.9
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 4799982387086788790220313788997056
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
.|+|+++|++..+.++. .+++||+|+....
T Consensus 40 vG~VvavG~~V~~~~~~----~lkvGDrVvv~~~ 69 (192)
T 1vj0_A 40 AGRVVEVNGEKRDLNGE----LLKPGDLIVWNRG 69 (192)
T ss_dssp EEEEEEESSCCBCTTSC----BCCTTCEEEECSE
T ss_pred EEEEEEECCEEEECCCC----CCCCEEEEECCCC
T ss_conf 99999958805321013----6421012101244
No 6
>>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus JCSC1435} (A:1-119,A:277-346)
Probab=89.77 E-value=0.83 Score=24.51 Aligned_cols=75 Identities=21% Similarity=0.341 Sum_probs=42.9
Q ss_pred CCCCCEEEEEECCC-----CCCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 51784799997475-----42122557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQS-----EIKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~-----e~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|-.+-|||+.... ..+...|. . ...|. -..|.|+++|+... ..++||+|.|.-..
T Consensus 29 ~p~~~dvLVkV~AvsvNp~D~k~r~~~-~-----~~~P~IlG~D~aGvV~avG~~V~---------~fkvGDrV~~ag~~ 93 (189)
T 3fbg_A 29 EPKVHEILVKIQSISVNPVDTKQRLMD-V-----SKAPRVLGFDAIGVVESVGNEVT---------MFNQGDIVYYSGSP 93 (189)
T ss_dssp CCCTTEEEEEEEEEEECHHHHHHTTSC-C-----SSSCBCCCCCEEEEEEEECTTCC---------SCCTTCEEEECCCT
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCC-C-----CCCCCCCCEEEEEEEEEEECCCC---------EECCCCCCCCCCCC
T ss_conf 899998999999983099999886179-8-----88994574148999997100110---------00112222222122
Q ss_pred CCEEEECCCCEEEEEEHHHEEE
Q ss_conf 6088976997799985301789
Q gi|254780848|r 81 GTEIKLNDGEEYLVMQESDIMG 102 (111)
Q Consensus 81 g~~v~~~dg~~y~i~~e~dIla 102 (111)
... .-..+|.++.++.+.-
T Consensus 94 ~r~---Gs~AEy~~Vde~~v~~ 112 (189)
T 3fbg_A 94 DQN---GSNAEYQLINERLVAK 112 (189)
T ss_dssp TSC---CSSBSEEEEEGGGEEE
T ss_pred CCC---CCCCCCCCCCCCCCCC
T ss_conf 222---2221122111012345
No 7
>>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 1.96A {Novosphingobium aromaticivorans DSM12444} (A:1-123,A:303-343)
Probab=88.11 E-value=0.67 Score=25.00 Aligned_cols=48 Identities=17% Similarity=0.103 Sum_probs=32.5
Q ss_pred EEEEEEEECCCEECCCCCEECCEECCCCEEEEE-CCCCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 247999823870867887902203137889970-56860889769977999853017899
Q gi|254780848|r 45 SSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG-KWSGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 45 ~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~-~~~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
..|+|+++|++.. ..++||+|+.- .+.+... - --.+|.++.++.+..+
T Consensus 71 ~vGvVv~vG~~vs---------~fkvGDrV~~~~~~~~~~~-G-~~aeYvvvp~~~l~~i 119 (164)
T 3gaz_A 71 LAGTVVAVGPEVD---------SFRVGDAVFGLTGGVGGLQ-G-THAQFAAVDARLLASK 119 (164)
T ss_dssp EEEEEEEECTTCC---------SCCTTCEEEEECCSSTTCC-C-SSBSEEEEEGGGEEEC
T ss_pred EEEEEEECCCCCC---------CCCCCCCEECCCCCCCCCC-C-CCEEEEEEEHHHEECC
T ss_conf 7999997663221---------1233221000134543223-4-4336664311102127
No 8
>>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} (A:1-166,A:310-359)
Probab=87.10 E-value=0.71 Score=24.87 Aligned_cols=48 Identities=25% Similarity=0.329 Sum_probs=32.1
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECC----------------------CCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 4799982387086788790220313788997056----------------------860889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW----------------------SGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~----------------------~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+|+++|++.. .+++||+|+...+ .|...... =.+|.++.++.++-+
T Consensus 82 ~G~Vv~vG~~V~---------~~k~GDrV~v~~~~~cg~C~~C~~G~~~~C~~~~~~G~~~~Gg-~aeYv~v~~~~l~~i 151 (216)
T 1h2b_A 82 VGYIEEVAEGVE---------GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGG-FAEFMRTSHRSVIKL 151 (216)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCS-SBSEEEECGGGEEEC
T ss_pred EEEEEEECCEEE---------EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEEEEEECCCCCC
T ss_conf 999998677566---------5237863765111257863333467533346322357688960-436889762134334
No 9
>>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, fatty acid synthesis (type 2), structural genomics; 1.75A {Homo sapiens} PDB: 2vcy_A (A:1-149,A:305-357)
Probab=86.79 E-value=1.3 Score=23.44 Aligned_cols=77 Identities=22% Similarity=0.287 Sum_probs=42.2
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCC----CCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 5178479999747542-----12255799457655465----30247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKP----SASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~----~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|-.+.||||..-..- .+..| .+-. ..+-| .-..|+|+++|++.. .+++||+|+.....
T Consensus 51 ~p~~~eVlVkv~aa~in~~D~~~~~G-~~~~--~~~~P~v~G~E~vG~Vv~vG~~V~---------~lk~GD~V~~~~~~ 118 (202)
T 1zsy_A 51 AVRGSDVRVKMLAAPINPSDINMIQG-NYGL--LPELPAVGGNEGVAQVVAVGSNVT---------GLKPGDWVIPANAG 118 (202)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHT-CSSC--CCCSSEECCSCCEEEEEEECTTCC---------SCCTTCEEEESSSC
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCC-CCCC--CCCCCEECCEEEEEEEEEECCCCC---------CCCCCCCCCCCCCC
T ss_conf 98989899999999259999999678-9898--899987663431789965202222---------11112233432111
Q ss_pred -CCEEEECCCCEEEEEEHHHEEEEE
Q ss_conf -608897699779998530178998
Q gi|254780848|r 81 -GTEIKLNDGEEYLVMQESDIMGIV 104 (111)
Q Consensus 81 -g~~v~~~dg~~y~i~~e~dIlavi 104 (111)
|. + .+|.++.++.++-+=
T Consensus 119 ~G~---~---aey~vv~~~~l~~iP 137 (202)
T 1zsy_A 119 LGT---W---RTEAVFSEEALIQVP 137 (202)
T ss_dssp SCC---S---BSEEEEEGGGEEEEC
T ss_pred CCC---C---CCCCCCCCCCCCCCC
T ss_conf 234---3---222222222222246
No 10
>>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} (A:1-136,A:269-327)
Probab=85.68 E-value=1.2 Score=23.54 Aligned_cols=79 Identities=16% Similarity=0.286 Sum_probs=42.8
Q ss_pred CCCCCCCEEEEEECCC-----CCCCCCCEEEECCCCCCC-CCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC-
Q ss_conf 4251784799997475-----421225579945765546-530247999823870867887902203137889970568-
Q gi|254780848|r 8 YLRPTRGRVVVRRLQS-----EIKTATGNILIPDTVSEK-PSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS- 80 (111)
Q Consensus 8 ~ikPl~drVLVk~~~~-----e~~T~~GgI~lp~~~~ek-~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~- 80 (111)
.-.|--+-||||..-. +.....| .+-..+---- ..-..|+|+++|++.. .+++||+|++....
T Consensus 23 ~p~p~~~eVlVkv~a~gvN~~D~~~r~G-~~~~~~~P~v~G~E~aG~V~~vG~~V~---------~~~vGDrV~~~~~~~ 92 (195)
T 1qor_A 23 PADPAENEIQVENKAIGINFIDTYIRSG-LYPPPSLPSGLGTEAAGIVSKVGSGVK---------HIKAGDRVVYAQSAL 92 (195)
T ss_dssp CCCCCTTEEEEEEEEEECCHHHHHHHHT-SSCCSSSSBCCCSCEEEEEEEECTTCC---------SCCTTCEEEESCCSS
T ss_pred CCCCCCCEEEEEEEEEECCHHHHHHHCC-CCCCCCCCCCCCEEEEEEEEECCCCCC---------CCCCCCCCCCCCCCC
T ss_conf 8998989899999999629899999789-999987796585688988720488753---------344676222234553
Q ss_pred CCEEEECCCCEEEEEEHHHEEE
Q ss_conf 6088976997799985301789
Q gi|254780848|r 81 GTEIKLNDGEEYLVMQESDIMG 102 (111)
Q Consensus 81 g~~v~~~dg~~y~i~~e~dIla 102 (111)
|. + .+|.++..+.+.-
T Consensus 93 G~---~---ae~~~v~~~~~~~ 108 (195)
T 1qor_A 93 GA---Y---SSVHNIIADKAAI 108 (195)
T ss_dssp CC---S---BSEEEEEGGGEEE
T ss_pred CC---C---CCCCCCHHCCCCC
T ss_conf 22---2---2222100013457
No 11
>>1gu7_A 2,4-dienoyl-COA reductase; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} (A:1-148,A:330-364)
Probab=84.41 E-value=2 Score=22.41 Aligned_cols=44 Identities=23% Similarity=0.325 Sum_probs=29.4
Q ss_pred EEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC-CCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 247999823870867887902203137889970568-60889769977999853017899
Q gi|254780848|r 45 SSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS-GTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 45 ~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~-g~~v~~~dg~~y~i~~e~dIlav 103 (111)
..|+|+++|++.. .+++||+|++.... |. + .+|.++.++.++.+
T Consensus 80 ~~G~V~~vG~~v~---------~~~vGD~V~~~~~~~G~---~---aey~vv~~~~l~~i 124 (183)
T 1gu7_A 80 GLFEVIKVGSNVS---------SLEAGDWVIPSHVNFGT---W---RTHALGNDDDFIKL 124 (183)
T ss_dssp CEEEEEEECTTCC---------SCCTTCEEEESSSCCCC---S---BSEEEEEGGGEEEE
T ss_pred EEEEEEEECCCCC---------CCCCCCEEEECCCCCCC---C---CCCCCCCCCCEEEC
T ss_conf 8999999789855---------55678877405534664---3---33334333202203
No 12
>>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein; 1.55A {Shewanella oneidensis mr-1} (A:1-140,A:255-315)
Probab=83.58 E-value=1.3 Score=23.39 Aligned_cols=78 Identities=19% Similarity=0.192 Sum_probs=41.0
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 5178479999747542-----122557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|-.+.|||+..-.-- +..+|. +.+ ...|. -..|+|+++|++.. .+++||+|++....
T Consensus 26 ~p~~geVLVrV~aagIn~~D~~~~~g~-~~~---~~~p~IpG~E~aGvVv~vG~~Vs---------~~~vGDrV~~~~~~ 92 (201)
T 3goh_A 26 ALAADDILVQNQAIGINPVDWKFIKAN-PIN---WSNGHVPGVDGAGVIVKVGAKVD---------SKXLGRRVAYHTSL 92 (201)
T ss_dssp CCCTTEEEEEEEEEEECHHHHHHHHHC-TTC---CCTTCCCCSEEEEEEEEECTTSC---------GGGTTCEEEEECCT
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCC-CCC---CCCCCCCCEEEEEEEEECCCCCC---------CCCCCCCCCCCCCC
T ss_conf 889898999999995699999986579-988---88995653007889840101221---------12223333321111
Q ss_pred CCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 60889769977999853017899
Q gi|254780848|r 81 GTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 81 g~~v~~~dg~~y~i~~e~dIlav 103 (111)
+..=-+ .+|.++.++.+.-+
T Consensus 93 ~~~G~~---AEy~vvp~~~l~~i 112 (201)
T 3goh_A 93 KRHGSF---AEFTVLNTDRVXTL 112 (201)
T ss_dssp TSCCSS---BSEEEEETTSEEEC
T ss_pred CCCCCC---CCEEEEEECCCCCC
T ss_conf 234443---21034321122223
No 13
>>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} (A:1-126,A:276-340)
Probab=82.78 E-value=2.6 Score=21.76 Aligned_cols=44 Identities=30% Similarity=0.240 Sum_probs=29.2
Q ss_pred EEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 24799982387086788790220313788997056860889769977999853017899
Q gi|254780848|r 45 SSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 45 ~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
..|+|+++|++.. .+++||+|+.....|. + .+|..+..+.++.+
T Consensus 70 ~aGvVv~vG~~V~---------~~kvGDrV~~~~~~G~---~---aeyv~v~a~~lv~v 113 (191)
T 3gms_A 70 GVGIVENVGAFVS---------RELIGKRVLPLRGEGT---W---QEYVKTSADFVVPI 113 (191)
T ss_dssp CEEEEEEECTTSC---------GGGTTCEEEECSSSCS---S---BSEEEEEGGGEEEC
T ss_pred EEEEEECCCCEEE---------ECCCCCCCCCCCCCCC---C---CCEEEEHHHHCCCC
T ss_conf 8977510240233---------1011122222112223---3---31011024433446
No 14
>>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} (A:1-166,A:318-371)
Probab=82.62 E-value=0.98 Score=24.09 Aligned_cols=23 Identities=39% Similarity=0.556 Sum_probs=19.3
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|+++|++.. .+++||+|+++
T Consensus 68 aGvV~~vG~~V~---------~~~~GD~Vvl~ 90 (220)
T 1f8f_A 68 SGIIEAIGPNVT---------ELQVGDHVVLS 90 (220)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEC
T ss_conf 999999899998---------77678889965
No 15
>>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} (A:1-171,A:325-376)
Probab=80.71 E-value=1.5 Score=23.01 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=30.4
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 5178479999747542-----12255799457655465302479998238708678879022031378899705
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|-.+-||||..-.-- ....|..-.+.-.--- --..|.|++||++.. .+++||+|+..-
T Consensus 30 ~P~~gEVlVkv~a~GIC~SDl~~~~G~~~~~~P~VlG-HE~aGvV~~VG~~Vt---------~~k~GD~Vv~~~ 93 (223)
T 1e3i_A 30 PPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLG-HECAGIVESVGPGVT---------NFKPGDKVIPFF 93 (223)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHTTCTTSCCCSSBCCC-CEEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCEECC-EEEEEEEEEECCCCC---------CCCCCCEEEEEE
T ss_conf 9898989999999989889999866999899983531-599999999889986---------456798899940
No 16
>>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} (A:1-165,A:340-398)
Probab=80.60 E-value=1.3 Score=23.38 Aligned_cols=24 Identities=29% Similarity=0.382 Sum_probs=18.9
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|++.. .+|+||+|....
T Consensus 69 ~G~VvevG~~V~---------~~kvGDrV~v~~ 92 (224)
T 2dph_A 69 TGEVVEKGSDVE---------LMDIGDLVSVPF 92 (224)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEECCS
T ss_pred EEEEEEECCCCC---------CCCCCCEEEECC
T ss_conf 999999899997---------556776542101
No 17
>>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A (A:1-143,A:297-352)
Probab=80.57 E-value=1.5 Score=23.00 Aligned_cols=87 Identities=18% Similarity=0.216 Sum_probs=45.6
Q ss_pred CCCCCCEEEEEECCCCC-CC----CCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 25178479999747542-12----2557994576554653----024799982387086788790220313788997056
Q gi|254780848|r 9 LRPTRGRVVVRRLQSEI-KT----ATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 9 ikPl~drVLVk~~~~e~-~T----~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-.|-.+-||||....-- .| -.++.+. ...|. -..|+|+++|++.. .+++||+|+...+
T Consensus 20 P~~g~~evLVkv~a~~iC~sDvh~~~~g~~~----~~~P~ilGHE~vG~V~evG~~V~---------~~kvGDrV~v~~~ 86 (199)
T 3fpc_A 20 PAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG----ERHNMILGHEAVGEVVEVGSEVK---------DFKPGDRVVVPAI 86 (199)
T ss_dssp CCCCTTCEEEEEEEEECCHHHHHHHHSCTTC----CCSSEECCCEEEEEEEEECTTCC---------SCCTTCEEEECSB
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHCCCCCC----CCCCEECEEEEEEEEEEECCCCC---------CCCCCCEEEEEEC
T ss_conf 9899898999999998789999997389989----99998540769999999889860---------0467858887412
Q ss_pred CC---------------------C---EEEECCCCEEEEEEHHHE-EEEEECCC
Q ss_conf 86---------------------0---889769977999853017-89984533
Q gi|254780848|r 80 SG---------------------T---EIKLNDGEEYLVMQESDI-MGIVVEEK 108 (111)
Q Consensus 80 ~g---------------------~---~v~~~dg~~y~i~~e~dI-lavi~~~~ 108 (111)
.. . .....-=.+|..+++.|. ++.+.+.-
T Consensus 87 ~~c~~c~~c~~G~~~~c~~~~~g~~~~~~~dG~fAEy~~Vp~a~~nl~~iPd~l 140 (199)
T 3fpc_A 87 TPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEI 140 (199)
T ss_dssp CCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHEEECCCCC
T ss_conf 676432100466534678754662124567864046666404044125279888
No 18
>>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* (A:1-136,A:269-325)
Probab=79.20 E-value=1.5 Score=23.07 Aligned_cols=77 Identities=23% Similarity=0.318 Sum_probs=41.6
Q ss_pred CCCCCEEEEEECCC-----CCCCCCCEEEECCCCCCCC-CCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC-CCC
Q ss_conf 51784799997475-----4212255799457655465-3024799982387086788790220313788997056-860
Q gi|254780848|r 10 RPTRGRVVVRRLQS-----EIKTATGNILIPDTVSEKP-SASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW-SGT 82 (111)
Q Consensus 10 kPl~drVLVk~~~~-----e~~T~~GgI~lp~~~~ek~-~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~-~g~ 82 (111)
.|-.+-||||..-. +....+| .+.....---+ .-..|+|+++|++.. .+++||+|.+.-. .|.
T Consensus 25 ~p~~geVlVkv~aagvn~~D~~~~~G-~~~~~~~P~v~G~E~aG~V~~vG~~v~---------~~~vGdrV~~~~~~~G~ 94 (193)
T 3jyn_A 25 APGPQAVVVRNKAIGLNFIDTYYRSG-LYPAPFLPSGLGAEGAGVVEAVGDEVT---------RFKVGDRVAYGTGPLGA 94 (193)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHT-SSCCSSSSBCCCCCEEEEEEEECTTCC---------SCCTTCEEEESSSSSCC
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCC-CCCCCCCCCCCEEEEECCCCCCCCCCC---------CCCCCCEEEECCCCCCC
T ss_conf 98979899999999609899999789-999876783361551012333589988---------74788852053013576
Q ss_pred EEEECCCCEEEEEEHHHEEE
Q ss_conf 88976997799985301789
Q gi|254780848|r 83 EIKLNDGEEYLVMQESDIMG 102 (111)
Q Consensus 83 ~v~~~dg~~y~i~~e~dIla 102 (111)
+ -+|.++.++.+.-
T Consensus 95 ---~---ae~~~v~~~~l~~ 108 (193)
T 3jyn_A 95 ---Y---SEVHVLPEANLVK 108 (193)
T ss_dssp ---S---BSEEEEEGGGEEE
T ss_pred ---C---CCCEECCHHHCCC
T ss_conf ---3---3312232887526
No 19
>>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} (A:1-147,A:297-347)
Probab=79.12 E-value=1.4 Score=23.22 Aligned_cols=53 Identities=26% Similarity=0.377 Sum_probs=35.4
Q ss_pred EEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC----------------------CEEEECCCCEEEEEEHHHEEE
Q ss_conf 2479998238708678879022031378899705686----------------------088976997799985301789
Q gi|254780848|r 45 SSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG----------------------TEIKLNDGEEYLVMQESDIMG 102 (111)
Q Consensus 45 ~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g----------------------~~v~~~dg~~y~i~~e~dIla 102 (111)
..|+|+++|++.. .+|+||+|+...+.+ ...... =.+|..+.+..++-
T Consensus 70 ~vG~Vv~vG~~v~---------~~k~GDrV~v~~~~~cg~C~~C~~g~~~~c~~~~~~G~~~~Gg-fAEyv~vp~~~~~~ 139 (198)
T 1jvb_A 70 IAGKIEEVGDEVV---------GYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGA-YAEYVIVPHYKYXY 139 (198)
T ss_dssp EEEEEEEECTTCC---------SCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCS-SBSEEEESCGGGEE
T ss_pred EEEEEEECCCCCC---------CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEEEEEEECCCC
T ss_conf 7999983587444---------5656725752452244642213588610136764345688973-52278875402224
Q ss_pred EEECC
Q ss_conf 98453
Q gi|254780848|r 103 IVVEE 107 (111)
Q Consensus 103 vi~~~ 107 (111)
.+.+-
T Consensus 140 ~p~~l 144 (198)
T 1jvb_A 140 KLRRL 144 (198)
T ss_dssp ECSSS
T ss_pred CCCCC
T ss_conf 66788
No 20
>>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant defense, biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* (A:1-103,A:142-163,A:326-366)
Probab=79.07 E-value=0.94 Score=24.19 Aligned_cols=49 Identities=22% Similarity=0.030 Sum_probs=29.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECC-C--CCEEEECCCCEEEEEEHHHEEEEEE
Q ss_conf 4799982387086788790220313788997056-8--6088976997799985301789984
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW-S--GTEIKLNDGEEYLVMQESDIMGIVV 105 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~-~--g~~v~~~dg~~y~i~~e~dIlavi~ 105 (111)
.|+|+++|++.. .+++||+|..... + |+.-.. .+-.-|..+.+|.+.|+
T Consensus 79 vG~Vv~vG~~Vt---------~~kvGDrV~~~~~~s~~g~~~~~--~~~l~f~~~~~i~p~ve 130 (166)
T 1yqd_A 79 VGEVTEVGSKVK---------KVNVGDKVGVGCLYSNHMVANER--YIIRFPDNMPLDTADIE 130 (166)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECSESBSEEEEEGG--GCEECCTTSCTTCCCEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEECCCEEEEEEEEE--EEEECCCCCCHHCCCEE
T ss_conf 999999899876---------66336668872202003410000--79997899987757679
No 21
>>1o89_A YHDH, B3253, YHDH; structural genomics, unknown function, possible NADPH-dependent quinone oxidoreductase; 2.25A {Escherichia coli} (A:1-139,A:312-345)
Probab=78.92 E-value=1.9 Score=22.47 Aligned_cols=46 Identities=15% Similarity=0.168 Sum_probs=30.1
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCC-CCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 47999823870867887902203137889970568-60889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS-GTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~-g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+|+++|... +++||+|+..... +...... -.+|..+.++.++.+
T Consensus 87 ~GvVv~~g~~~-----------~kvGDrV~~~~~~~~~~~~G~-~aey~~v~~~~v~~i 133 (173)
T 1o89_A 87 AGTVRTSEDPR-----------FHAGQEVLLTGWGVGENHWGG-LAEQARVKGDWLVAM 133 (173)
T ss_dssp EEEEEEECSTT-----------CCTTCEEEEECTTBTTTBCCS-SBSEEEECGGGCEEC
T ss_pred EEEEEECCCCC-----------EECCCCCEEEEECCCCCCCCC-CCCEEEEEEEEEEEC
T ss_conf 88999526431-----------025887268531245787865-421589752008975
No 22
>>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, alternative splicing, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} (A:1-151,A:324-375)
Probab=78.14 E-value=3.1 Score=21.28 Aligned_cols=43 Identities=30% Similarity=0.369 Sum_probs=29.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECC---CCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 4799982387086788790220313788997056---860889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW---SGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~---~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|.|+++|++.. .+++||+|+..-. .|. + .+|.++.++.+..+
T Consensus 103 aG~V~~~G~~v~---------~~~~GDrV~~~~~~~~~G~---~---aeyv~v~~~~v~~i 148 (203)
T 2vn8_A 103 SGVVMECGLDVK---------YFKPGDEVWAAVPPWKQGT---L---SEFVVVSGNEVSHK 148 (203)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECCTTSCCS---S---BSEEEEEGGGEEEC
T ss_pred EEEEEECCCCCH---------HEECCCCCCCCCCCCCCCC---C---CCCCCCCCCCCCCC
T ss_conf 999985132220---------0000222322111224442---3---33231100012333
No 23
>>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} (A:1-165,A:341-398)
Probab=78.09 E-value=1.4 Score=23.15 Aligned_cols=24 Identities=29% Similarity=0.421 Sum_probs=18.9
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|++.. .+|+||+|....
T Consensus 70 ~G~VvevG~~V~---------~~kvGDrV~v~~ 93 (223)
T 1kol_A 70 TGEVIEKGRDVE---------NLQIGDLVSVPF 93 (223)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEECCS
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEE
T ss_conf 999999889998---------687798877752
No 24
>>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} (A:1-145,A:318-356)
Probab=77.63 E-value=1.7 Score=22.82 Aligned_cols=85 Identities=20% Similarity=0.210 Sum_probs=44.1
Q ss_pred CCCCCEEEEEECCCCCC-C----CCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 51784799997475421-2----2557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSEIK-T----ATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e~~-T----~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|-.+-||||..-.--- + -.|.- .+......|. -..|+|+++|++.. .+++||+|....+.
T Consensus 28 ~p~p~eVLVkV~a~gIc~sD~~~~~g~~-~~~~~~~~P~v~GhE~~G~VvevG~~V~---------~fkvGdrVv~~~~~ 97 (184)
T 1pl8_A 28 EPGPNEVLLRMHSVGICGSDVHYWEYGR-IGNFIVKKPMVLGHEASGTVEKVGSSVK---------HLKPGDRVAIEPGA 97 (184)
T ss_dssp CCCTTEEEEEEEEEEECHHHHHHHHHSE-ETTEECSSCEECCCEEEEEEEEECTTCC---------SCCTTCEEEECSEE
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCCC-CCCCCCCCCEEEEEEEEEEEEEECCCCC---------EECCCCEEEEECCC
T ss_conf 8898989999999998889999972786-7777889981503778999999889860---------50588767540134
Q ss_pred CC-----------------EE---EECCC--CEEEEEEHHHEEEEE
Q ss_conf 60-----------------88---97699--779998530178998
Q gi|254780848|r 81 GT-----------------EI---KLNDG--EEYLVMQESDIMGIV 104 (111)
Q Consensus 81 g~-----------------~v---~~~dg--~~y~i~~e~dIlavi 104 (111)
.. .+ ...+| .+|..+.++.+..+=
T Consensus 98 ~~~~~~~~~~g~~~l~~~~~~~g~~~~~G~faey~~vp~~~l~~iP 143 (184)
T 1pl8_A 98 PRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLP 143 (184)
T ss_dssp CSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHEEECC
T ss_conf 6554432235654657752101345789843689971458599989
No 25
>>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NADP-binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* (A:1-127,A:284-371)
Probab=77.47 E-value=1.8 Score=22.67 Aligned_cols=81 Identities=20% Similarity=0.195 Sum_probs=40.4
Q ss_pred CCCCCEEEEEECCCC-----CCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEE
Q ss_conf 517847999974754-----212255799457655465302479998238708678879022031378899705686088
Q gi|254780848|r 10 RPTRGRVVVRRLQSE-----IKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEI 84 (111)
Q Consensus 10 kPl~drVLVk~~~~e-----~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v 84 (111)
.|-.+-||||..-.- -+. .+....+... -..-..|+|+++|++.. .+++||+|+-.-.+....
T Consensus 33 ~p~~~eVLVkv~a~ainp~D~~~-~~~~~~~p~i--~G~d~aG~V~~vg~~v~---------~~~vGDrV~g~~~g~~~~ 100 (215)
T 3gqv_A 33 MLPRDQVYVRVEAVAINPSDTSM-RGQFATPWAF--LGTDYAGTVVAVGSDVT---------HIQVGDRVYGAQNEMCPR 100 (215)
T ss_dssp CCCTTSEEEEEEEEECCGGGGC------CCTTSC--CCSEEEEEEEEECTTCC---------SCCTTCEEEEECCTTCTT
T ss_pred CCCCCEEEEEEEEEEECHHHHHH-HCCCCCCCCC--CCEEEEEEEEEECCCCC---------CCCCCCCCCCCCCCCCCC
T ss_conf 89989899999999678999997-4689999872--63268999999658985---------010013553236753112
Q ss_pred EECCC--CEEEEEEHHHEEE
Q ss_conf 97699--7799985301789
Q gi|254780848|r 85 KLNDG--EEYLVMQESDIMG 102 (111)
Q Consensus 85 ~~~dg--~~y~i~~e~dIla 102 (111)
...+| .+|.++..+.+.-
T Consensus 101 ~~~~Gafaey~~v~~~~~~k 120 (215)
T 3gqv_A 101 TPDQGAFSQYTVTRGRVWAK 120 (215)
T ss_dssp CTTCCSSBSEEECCTTCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 22355432122222211212
No 26
>>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreductase; 1.80A {Sulfolobus solfataricus P2} (A:1-144,A:313-344)
Probab=77.24 E-value=2.9 Score=21.50 Aligned_cols=86 Identities=21% Similarity=0.198 Sum_probs=46.1
Q ss_pred CCCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 25178479999747542-----122557994576554653----024799982387086788790220313788997056
Q gi|254780848|r 9 LRPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 9 ikPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-.|-.+.||||..-.-- .+-.| .+-+ ..-..|. -..|+|+++|+... .|+||+|+....
T Consensus 24 P~p~~~eVLVkV~a~gIc~sDl~~~~G-~~~~-~~~~~P~V~GhE~~G~V~~vG~v~~----------~k~GDrV~~~~~ 91 (176)
T 2h6e_A 24 PEPQGEEVLIRIGGAGVCRTDLRVWKG-VEAK-QGFRLPIILGHENAGTIVEVGELAK----------VKKGDNVVVYAT 91 (176)
T ss_dssp CCCCTTCEEEEEEEEECCHHHHHHHTT-SCCC-TTCCSSEECCCCEEEEEEEECTTCC----------CCTTCEEEECSC
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHCC-CCCC-CCCCCCCCCCEEEEEEEEEEEEEEE----------ECCCCCCCCCCC
T ss_conf 999989899999999888999998679-9876-5688982375678988987514644----------114874222440
Q ss_pred CC----------------------CEEEECCCCEEEEEEHHHEEEEEECC
Q ss_conf 86----------------------08897699779998530178998453
Q gi|254780848|r 80 SG----------------------TEIKLNDGEEYLVMQESDIMGIVVEE 107 (111)
Q Consensus 80 ~g----------------------~~v~~~dg~~y~i~~e~dIlavi~~~ 107 (111)
.+ ...... -.+|.+++++.++.++++-
T Consensus 92 ~~~~~c~~c~~G~~~~c~~~~~~G~~~~Gg-faEyv~vp~~~~~~~p~~l 140 (176)
T 2h6e_A 92 WGDLTCRYCREGKFNICKNQIIPGQTTNGG-FSEYMLVKSSRWLVKLNSL 140 (176)
T ss_dssp BCCSCSTTGGGTCGGGCTTCBCBTTTBCCS-SBSEEEESCGGGEEEESSS
T ss_pred EECCCCCCCCCCCCCCCCCCCEECCCCCCC-CCCCCCCCCCCCCCCCCCC
T ss_conf 100112110000012246750304678987-5332334421111246764
No 27
>>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase; 1.30A {Burkholderia SP} (A:1-142,A:275-333)
Probab=76.56 E-value=2 Score=22.39 Aligned_cols=78 Identities=22% Similarity=0.308 Sum_probs=43.7
Q ss_pred CCCCCEEEEEECCC-----CCCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 51784799997475-----42122557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQS-----EIKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~-----e~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|-.+-|||+..-. +....+| .+-+.....-|. -..|+|+++|++.. ..++||+|.+.-..
T Consensus 25 ~p~~geVlVkv~a~gvn~~D~~~r~G-~~~~~~~~~~P~v~G~E~aG~V~~vG~~V~---------~~~vGdrV~~~~~~ 94 (201)
T 1wly_A 25 SPGPGQVRLRNTAIGVNFLDTYHRAG-IPHPLVVGEPPIVVGFEAAAVVEEVGPGVT---------DFTVGERVCTCLPP 94 (201)
T ss_dssp CCCTTEEEEEEEEEEECHHHHHHHC-----------CCEECCCEEEEEEEEECTTCC---------SCCTTCEEEECSSS
T ss_pred CCCCCEEEEEEEEEECCHHHHHHHCC-CCCCCCCCCCCCCCCEEEEECCCCCCCCCC---------CCCCCCCCCCCCCC
T ss_conf 99989899999999438889999779-987655678982576366641301056556---------76545433333025
Q ss_pred -CCEEEECCCCEEEEEEHHHEEEE
Q ss_conf -60889769977999853017899
Q gi|254780848|r 81 -GTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 81 -g~~v~~~dg~~y~i~~e~dIlav 103 (111)
|. + -+|..+..+.++-+
T Consensus 95 ~G~---~---Ae~~~vpa~~l~~l 112 (201)
T 1wly_A 95 LGA---Y---SQERLYPAEKLIKV 112 (201)
T ss_dssp CCC---S---BSEEEEEGGGCEEC
T ss_pred CCC---C---CCEEECCHHHHEEE
T ss_conf 786---4---20253225542420
No 28
>>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} (A:1-140,A:320-362)
Probab=76.40 E-value=4.1 Score=20.65 Aligned_cols=76 Identities=22% Similarity=0.292 Sum_probs=41.6
Q ss_pred CCCCCEEEEEECCCC-----CCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 517847999974754-----2122557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSE-----IKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e-----~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|-.+.||||....- -....| -+.+.. ..+. -..|.|+++|++... .+++||+|.+...+
T Consensus 50 ~p~~~eVLVkv~aagIn~~D~~~~~G-~~~~~~--~~p~v~G~e~aG~Vv~vG~~v~~--------~f~vGd~V~~~~~G 118 (183)
T 2c0c_A 50 LPGDGDLLVRNRFVGVNASDINYSAG-RYDPSV--KPPFDIGFEGIGEVVALGLSASA--------RYTVGQAVAYMAPG 118 (183)
T ss_dssp CCCTTEEEEEEEEEECCTTHHHHHTT-TTCTTC--CSCEECCSEEEEEEEEECTTGGG--------TCCTTCEEEEECSC
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCC-CCCCCC--CCCCCCCCEEEEEEEEEECCCCC--------CCCCCCCCCCCCCC
T ss_conf 88999899999999229999999678-989877--89804763158899998636321--------21112222222222
Q ss_pred CCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 60889769977999853017899
Q gi|254780848|r 81 GTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 81 g~~v~~~dg~~y~i~~e~dIlav 103 (111)
+. .+|.++.++.+..+
T Consensus 119 ~~-------aEyvvv~~~~vv~i 134 (183)
T 2c0c_A 119 SF-------AEYTVVPASIATPV 134 (183)
T ss_dssp CS-------BSEEEEEGGGCEEC
T ss_pred CC-------CCCCCCHHHHHCCC
T ss_conf 22-------22321024442147
No 29
>>1cdo_A Alcohol dehydrogenase; oxidoreductase; HET: NAD; 2.05A {Gadus callarias} (A:1-168,A:323-374)
Probab=73.86 E-value=3.2 Score=21.27 Aligned_cols=23 Identities=35% Similarity=0.450 Sum_probs=18.2
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|.|++||++.. .+++||+|+..
T Consensus 71 aGvV~~vG~~V~---------~~~~GD~Vv~~ 93 (220)
T 1cdo_A 71 AGIVESVGPGVT---------EFQPGEKVIPL 93 (220)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEE
T ss_conf 999999556333---------22578704765
No 30
>>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* (A:1-138,A:310-343)
Probab=73.13 E-value=4.4 Score=20.47 Aligned_cols=87 Identities=22% Similarity=0.199 Sum_probs=46.7
Q ss_pred CCCCCCEEEEEECCCCCCC-----CCCEEEECCCCCCCC----CCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 2517847999974754212-----255799457655465----3024799982387086788790220313788997056
Q gi|254780848|r 9 LRPTRGRVVVRRLQSEIKT-----ATGNILIPDTVSEKP----SASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 9 ikPl~drVLVk~~~~e~~T-----~~GgI~lp~~~~ek~----~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-.|-.+.||||.....--. -+|....+. ....+ .-..|+|+++|++.. .+++||+|+...+
T Consensus 21 P~p~~~eVLVkv~a~gin~sD~~~~~G~~~~~~-~~~~p~i~GhE~~G~V~evG~~v~---------~~k~GdrV~v~~~ 90 (172)
T 2dq4_A 21 PEPGPGEILVRVEAASICGTDLHIWKWDAWARG-RIRPPLVTGHEFSGVVEAVGPGVR---------RPQVGDHVSLESH 90 (172)
T ss_dssp CCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHH-HCCSSEECCCEEEEEEEEECTTCC---------SSCTTCEEEECCE
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCC-CCCCCEECCEEEEEEEEEECCCCC---------EECCCCEEEECCC
T ss_conf 989979899999999888899998668876677-779885152430036875326741---------0011333664143
Q ss_pred C----------------------CCEEEECCCCEEEEEEHHHEEEEEEC
Q ss_conf 8----------------------60889769977999853017899845
Q gi|254780848|r 80 S----------------------GTEIKLNDGEEYLVMQESDIMGIVVE 106 (111)
Q Consensus 80 ~----------------------g~~v~~~dg~~y~i~~e~dIlavi~~ 106 (111)
. |...... =.+|..++++.++.+=++
T Consensus 91 ~~~g~c~~c~~g~~~~c~~~~~~g~~~~Gg-fAEy~~vp~~~v~~iPe~ 138 (172)
T 2dq4_A 91 IVCHACPACRTGNYHVCLNTQILGVDRDGG-FAEYVVVPAENAWVNPKD 138 (172)
T ss_dssp ECCSCSHHHHTTCGGGCTTCEEBTTTBCCS-SBSEEEEEGGGEEEECTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEECCCCCC-CCCCCCCCCCCCCCCCCC
T ss_conf 122232100022322111232000245675-320121110223468865
No 31
>>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} (A:1-168,A:323-373)
Probab=72.86 E-value=3.4 Score=21.06 Aligned_cols=23 Identities=39% Similarity=0.434 Sum_probs=17.5
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|.|++||++..+ +++||+|+..
T Consensus 71 aG~V~~VG~~V~~---------~k~Gd~Vv~~ 93 (219)
T 1p0f_A 71 VGVVESIGAGVTC---------VKPGDKVIPL 93 (219)
T ss_dssp EEEEEEECTTCCS---------CCTTCEEEEC
T ss_pred EEEEEEECCCCEE---------ECCCCEEEEE
T ss_conf 9999998899605---------2578757777
No 32
>>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} (A:1-156,A:320-360)
Probab=71.33 E-value=3.4 Score=21.12 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=18.5
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|++... .+++||+|+...
T Consensus 71 vG~Vv~vG~~v~~--------~~k~GDrVvv~~ 95 (197)
T 1piw_A 71 VGKVVKLGPKSNS--------GLKVGQRVGVGA 95 (197)
T ss_dssp EEEEEEECTTCCS--------SCCTTCEEEECS
T ss_pred EEEEEEECCCCCC--------CCCCCCEEEEEE
T ss_conf 9999996786556--------885565765530
No 33
>>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, alternative splicing, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* (A:1-158,A:290-354)
Probab=71.31 E-value=7.5 Score=19.17 Aligned_cols=80 Identities=23% Similarity=0.300 Sum_probs=44.6
Q ss_pred CCCCCCEEEEEECCCC-----CCCCCCEEEECC-CCCCCCC-CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC
Q ss_conf 2517847999974754-----212255799457-6554653-02479998238708678879022031378899705686
Q gi|254780848|r 9 LRPTRGRVVVRRLQSE-----IKTATGNILIPD-TVSEKPS-ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG 81 (111)
Q Consensus 9 ikPl~drVLVk~~~~e-----~~T~~GgI~lp~-~~~ek~~-~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g 81 (111)
-.|-.+.||||..-.- -.+..| .+.+. ....-+. -..|+|+++|++... ..++||+|+---..|
T Consensus 45 P~p~~~eVLVkV~a~giN~~D~~~~~G-~~~~~~~~p~i~G~E~aG~Vv~vG~~v~~--------~~~~Gd~V~g~~~~G 115 (223)
T 2j8z_A 45 PSPGEGEVLLKVAASALNRADLMQRQG-QYDPPPGASNILGLEASGHVAELGPGCQG--------HWKIGDTAMALLPGG 115 (223)
T ss_dssp CCCCTTEEEEEEEEEECCHHHHHHHHT-SSCCCTTSCSSSCSEEEEEEEEECSCC----------CCCTTCEEEEECSSC
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHCC-CCCCCCCCCCCCEEEECCCCEEECCCEEC--------CCCCCCEEEEECCCC
T ss_conf 989989899999999788899998769-98998888932557110551675032001--------234785577611356
Q ss_pred CEEEECCCCEEEEEEHHHEEEE
Q ss_conf 0889769977999853017899
Q gi|254780848|r 82 TEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 82 ~~v~~~dg~~y~i~~e~dIlav 103 (111)
. + -+|.++.++.++.+
T Consensus 116 ~---~---aey~~v~~~~~~~~ 131 (223)
T 2j8z_A 116 G---Q---AQYVTVPEGLLMPI 131 (223)
T ss_dssp C---S---BSEEEEEGGGEEEC
T ss_pred C---C---CEEEEEEHHCEEEC
T ss_conf 6---4---04442204101447
No 34
>>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2, protein structure initiative; 2.19A {Streptomyces coelicolor} (A:1-204,A:389-456)
Probab=70.52 E-value=4.4 Score=20.46 Aligned_cols=50 Identities=24% Similarity=0.268 Sum_probs=31.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC--------------CEEEE-----CC--CCEEEEEEHHHEEEEE
Q ss_conf 479998238708678879022031378899705686--------------08897-----69--9779998530178998
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG--------------TEIKL-----ND--GEEYLVMQESDIMGIV 104 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g--------------~~v~~-----~d--g~~y~i~~e~dIlavi 104 (111)
.|.|+++|++.. ..++||+|...-... ..... .+ =-+|.++..+.++.+=
T Consensus 126 aGvVv~vG~~V~---------~~kvGDrVv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Gg~AEy~vv~a~~lv~iP 196 (272)
T 3krt_A 126 AGVVLRTGPGVN---------AWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKP 196 (272)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGGEEECC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHEEECC
T ss_conf 999999899997---------57779888985236678766555442346554423345888621669997314214168
No 35
>>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} (A:1-166,A:322-373)
Probab=68.75 E-value=4.8 Score=20.25 Aligned_cols=55 Identities=24% Similarity=0.258 Sum_probs=28.4
Q ss_pred CCCCCEEEEEECCCC-----CCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 517847999974754-----2122557994576554653----0247999823870867887902203137889970
Q gi|254780848|r 10 RPTRGRVVVRRLQSE-----IKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 10 kPl~drVLVk~~~~e-----~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|-.+-||||....- -.+-.|..-.| .-|. -..|+|++||++... +++||+|+..
T Consensus 28 ~P~pgEVlVkV~aaGiC~SDl~~~~G~~p~~----~~P~vlGHE~aGvV~~VG~~Vt~---------~~~Gd~Vv~~ 91 (218)
T 2fzw_A 28 PPKAHEVRIKIIATAVCHTDAYTLSGADPEG----CFPVILGHLGAGIVESVGEGVTK---------LKAGDTVIPL 91 (218)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHTCCTTC----CSSBCCCCEEEEEEEEECTTCCS---------CCTTCEEEEC
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCCCCCC----CCCCCCCEEEEEEEEEECCEECC---------CCCCCEEEEE
T ss_conf 9898989999999999899999966999988----99832624689999996874033---------6799877740
No 36
>>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} (A:1-142,A:316-352)
Probab=67.67 E-value=4.2 Score=20.55 Aligned_cols=86 Identities=21% Similarity=0.199 Sum_probs=42.9
Q ss_pred CCCCCCEEEEEECCCCCC-----CCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 251784799997475421-----22557994576554653----024799982387086788790220313788997056
Q gi|254780848|r 9 LRPTRGRVVVRRLQSEIK-----TATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 9 ikPl~drVLVk~~~~e~~-----T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-.|-.+-||||..-.--- +-.|+ +.++.....|. -..|+|+++|++.. ..++||+|.....
T Consensus 24 P~p~pgeVlVkv~a~gIc~sDl~~~~g~-~~~~~~~~~P~V~GhE~~G~Vv~vG~~V~---------~~k~GdrV~~~~~ 93 (179)
T 1e3j_A 24 PEPKEDEVLLQMAYVGICGSDVHYYEHG-RIADFIVKDPMVIGHEASGTVVKVGKNVK---------HLKKGDRVAVEPG 93 (179)
T ss_dssp CCCCTTEEEEEEEEEEECHHHHHHHHHS-BSSSCBCCSCEECCCEEEEEEEEECTTCC---------SCCTTCEEEECCE
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHCCC-CCCCCCCCCCEEEEEEEEEEEEEECCCCC---------CCCCCCEEEECCC
T ss_conf 9899898999999999889999997389-87777788997746889999999778755---------5799998998245
Q ss_pred C----------------------CCEEEECCCCEEEEEEHHHEEEEE
Q ss_conf 8----------------------608897699779998530178998
Q gi|254780848|r 80 S----------------------GTEIKLNDGEEYLVMQESDIMGIV 104 (111)
Q Consensus 80 ~----------------------g~~v~~~dg~~y~i~~e~dIlavi 104 (111)
. +..-...-=.+|.++.++-+..+=
T Consensus 94 ~~~~~~~~~~~g~~~~c~~~~~~~~~~~~G~faey~vv~~~~l~~iP 140 (179)
T 1e3j_A 94 VPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLP 140 (179)
T ss_dssp ECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHEEECC
T ss_conf 67777522358874546664111568875333225534066105068
No 37
>>1llu_A Alcohol dehydrogenase; enzyme-coenzyme-substrate complex, proton relay system, NADH, oxidoreductase; HET: NAD; 2.30A {Pseudomonas aeruginosa} (A:1-147,A:311-342)
Probab=67.18 E-value=4.4 Score=20.46 Aligned_cols=83 Identities=23% Similarity=0.260 Sum_probs=43.5
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 5178479999747542-----122557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|--+-||||..-.-- .+..|..-.+ ...|. -..|+|+++|++.. .+++||+|....+.
T Consensus 28 ~p~~~eVLIkV~a~gin~sD~~~~~g~~~~~---~~~P~v~GhE~~G~Vv~vG~~v~---------~~k~Gd~V~v~~~~ 95 (179)
T 1llu_A 28 LPGPGQVLVKIEASGVCHTDLHAAEGDWPVK---PPLPFIPGHEGVGYVAAVGSGVT---------RVKEGDRVGIPWLY 95 (179)
T ss_dssp CCCTTCEEEEEEEEECCHHHHHHHHTCSSSC---CCSSBCCCSCEEEEEEEECTTCC---------SCCTTCEEEECSEE
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCCCCCC---CCCCEECCEEEEEEEEECCCCCC---------CCCCCCEEEEECCC
T ss_conf 8998989999999945889999976998878---99883353255567876377467---------88999989871255
Q ss_pred C-----------------------CEEEECCCCEEEEEEHHHEEEEEE
Q ss_conf 6-----------------------088976997799985301789984
Q gi|254780848|r 81 G-----------------------TEIKLNDGEEYLVMQESDIMGIVV 105 (111)
Q Consensus 81 g-----------------------~~v~~~dg~~y~i~~e~dIlavi~ 105 (111)
. ...... -.+|..+.++.+..+=+
T Consensus 96 ~~~~~c~~~~~~~~~~~~~~~~~G~~~~G~-~aey~~vp~~~l~~iP~ 142 (179)
T 1llu_A 96 TACGCCEHCLTGWETLCESQQNTGYSVNGG-YAEYVLADPNYVGILPK 142 (179)
T ss_dssp ECCSSSHHHHTTCGGGCTTCEEBTTTBCCS-SBSEEEECTTTSEECCT
T ss_pred CCCCCCHHCCCCCCCCCCCCCCCCCCCCCC-CEEEEEECHHHCCCCCC
T ss_conf 667875100489845354335553356975-66699944787668889
No 38
>>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* (A:33-96,A:135-159,A:319-357)
Probab=66.44 E-value=4.8 Score=20.24 Aligned_cols=25 Identities=40% Similarity=0.553 Sum_probs=19.9
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 4799982387086788790220313788997056
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
.|+|+++|++.. .+++||+|.+.-.
T Consensus 40 vGvVveVG~~Vt---------~fkvGDrVgVgc~ 64 (128)
T 2cf5_A 40 VGEVVEVGSDVS---------KFTVGDIVGVGCL 64 (128)
T ss_dssp EEEEEEECSSCC---------SCCTTCEEEECSE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEEE
T ss_conf 999999899744---------5644447988750
No 39
>>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* (A:1-143,A:335-366)
Probab=66.13 E-value=7.3 Score=19.25 Aligned_cols=46 Identities=24% Similarity=0.243 Sum_probs=28.0
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC--------------------CEE--EECCC--CEEEEEEHHHEE
Q ss_conf 479998238708678879022031378899705686--------------------088--97699--779998530178
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG--------------------TEI--KLNDG--EEYLVMQESDIM 101 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g--------------------~~v--~~~dg--~~y~i~~e~dIl 101 (111)
.|+|+++|+ .+++||+|+...+.+ ... ...|| .+|..++.+.++
T Consensus 69 vG~V~e~G~------------~vk~GdrV~~~~~~~cg~C~~C~~G~~~~c~~~~~~~~~~~~~~G~~AEyv~vp~~~v~ 136 (175)
T 2cdc_A 69 IGVVEESYH------------GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLV 136 (175)
T ss_dssp EEEECSCCS------------SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEE
T ss_pred EEEEEEECC------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 999999556------------64333332110001233343224455343222211232221135640068997512334
Q ss_pred EE
Q ss_conf 99
Q gi|254780848|r 102 GI 103 (111)
Q Consensus 102 av 103 (111)
.+
T Consensus 137 ~i 138 (175)
T 2cdc_A 137 KI 138 (175)
T ss_dssp EE
T ss_pred CC
T ss_conf 67
No 40
>>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG, PSI; HET: DTY; 2.80A {Geobacillus stearothermophilus} (A:1-121,A:294-328)
Probab=66.02 E-value=5.9 Score=19.77 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=28.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC-CEEEECCCCEEEEEEHHHEEEE
Q ss_conf 479998238708678879022031378899705686-0889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG-TEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g-~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+||+.|... .++||+|+-..+.. ..- ..--.+|.++..+.+..+
T Consensus 69 ~GvVVg~gv~~-----------~kvGDrV~~~~~~~~~~~-~G~~aeyv~v~~~~~~~i 115 (156)
T 1xa0_A 69 AGVVVSSQHPR-----------FREGDEVIATGYEIGVTH-FGGYSEYARLHGEWLVPL 115 (156)
T ss_dssp EEEEEECCSSS-----------CCTTCEEEEESTTBTTTB-CCSSBSEEEECGGGCEEC
T ss_pred CCEEECCCCCC-----------CCCCCCCCCEECCCCCCC-CCCCCEEEEEEEHEEEEE
T ss_conf 20000112232-----------101365420001335534-775530799981208960
No 41
>>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} (A:1-180,A:364-404)
Probab=65.13 E-value=6.1 Score=19.68 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=33.2
Q ss_pred EEEEEEECCCEECC-CCCEECCEECCCCEEEEECCCC-----------------CEEEE--CCC--CEEEEEEHHHEEEE
Q ss_conf 47999823870867-8879022031378899705686-----------------08897--699--77999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQ-SGKVIEPEVSKGDIVLFGKWSG-----------------TEIKL--NDG--EEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~-~G~~~p~~vkvGD~Vl~~~~~g-----------------~~v~~--~dg--~~y~i~~e~dIlav 103 (111)
.|+|+++|++.... .|+ .+++||+|.-..+.+ ..+.. .|| .+|.++.++.+.-+
T Consensus 100 ~G~VveVG~~V~~~~~g~----~v~vGd~V~~~~~~~cg~C~~C~~G~~~~C~~~~~~G~~~~Gg~aEYv~vp~~~v~~i 175 (221)
T 3ip1_A 100 SGVVVEAGPEAINRRTNK----RFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSL 175 (221)
T ss_dssp EEEEEEECTTCEETTTTE----ECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEC
T ss_pred EEEEEEECCCCCCCCCCC----CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECC
T ss_conf 999999899854476664----1235735765122245555310133433345321112367765321342013206504
No 42
>>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} (A:1-167,A:323-374)
Probab=64.68 E-value=5.3 Score=20.00 Aligned_cols=23 Identities=35% Similarity=0.460 Sum_probs=17.7
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|.|++||++..+ +++||+|+..
T Consensus 70 aGvV~~vG~~v~~---------~~~GD~Vv~~ 92 (219)
T 2jhf_A 70 AGIVESIGEGVTT---------VRPGDKVIPL 92 (219)
T ss_dssp EEEEEEECTTCCS---------CCTTCEEEEC
T ss_pred EEEEEEECCCCCC---------CCCCCEEEEE
T ss_conf 9999995572111---------1368514664
No 43
>>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} (A:1-141,A:304-339)
Probab=62.01 E-value=5.4 Score=19.99 Aligned_cols=84 Identities=23% Similarity=0.225 Sum_probs=43.2
Q ss_pred CCCCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 425178479999747542-----122557994576554653----02479998238708678879022031378899705
Q gi|254780848|r 8 YLRPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 8 ~ikPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.-+|--+-||||.....- .+..|.--.+. .-|. -..|+|+++|++.. ..++||+|.+..
T Consensus 20 ~P~p~pgeVlVkv~a~gIn~sDi~~~~G~~~~~~---~~P~vlGhE~~G~Vv~vG~~v~---------~~k~GdrV~v~~ 87 (177)
T 1rjw_A 20 KPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP---KLPLIPGHEGVGIVEEVGPGVT---------HLKVGDRVGIPW 87 (177)
T ss_dssp CCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC---CSSBCCCSCEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred CCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCC---CCCEECCEEEEEEEEEECCCCC---------CCCCCCEEEECC
T ss_conf 9999989799999999468899999659988788---8984274478999976315777---------764377775134
Q ss_pred CCCC------------------EEE-E-CC--CCEEEEEEHHHEEEE
Q ss_conf 6860------------------889-7-69--977999853017899
Q gi|254780848|r 79 WSGT------------------EIK-L-ND--GEEYLVMQESDIMGI 103 (111)
Q Consensus 79 ~~g~------------------~v~-~-~d--g~~y~i~~e~dIlav 103 (111)
..+. ... + .| -.+|.++.++.++.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~Aeyv~vp~~~l~~v 134 (177)
T 1rjw_A 88 LYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKI 134 (177)
T ss_dssp EEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEEC
T ss_pred CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHEEEC
T ss_conf 34654343333378733245665355466986632554246988999
No 44
>>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA; 2.30A {Thermus thermophilus HB8} (A:1-148,A:294-343)
Probab=61.19 E-value=11 Score=18.32 Aligned_cols=82 Identities=26% Similarity=0.317 Sum_probs=44.6
Q ss_pred CCCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 25178479999747542-----122557994576554653----024799982387086788790220313788997056
Q gi|254780848|r 9 LRPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 9 ikPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-+|--+-||||..-..- .+..| .+.+.. ..|. -..|+|+++|++.. ..++||+|+....
T Consensus 23 P~p~~geVLVkV~a~gin~~D~~~~~G-~~~~~~--~~p~i~G~e~aG~Vv~vG~~v~---------~~~~Gd~V~~~~~ 90 (198)
T 2eih_A 23 PEPGPKEVRVRLKAAALNHLDVWVRKG-VASPKL--PLPHVLGADGSGVVDAVGPGVE---------GFAPGDEVVINPG 90 (198)
T ss_dssp CCCCTTEEEEEEEEEECCHHHHHHHHT-SSSTTC--CSSEECCSEEEEEEEEECSSCC---------SCCTTCEEEECCE
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHCC-CCCCCC--CCCEECCEEEEEEEEECCCCCC---------CCCCCCEEEECCC
T ss_conf 999979899999999658899999679-988779--9982771566865652256778---------7899999987763
Q ss_pred C----------------------CCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 8----------------------60889769977999853017899
Q gi|254780848|r 80 S----------------------GTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 80 ~----------------------g~~v~~~dg~~y~i~~e~dIlav 103 (111)
. |..... ---+|.++.++.+..+
T Consensus 91 ~~~~~~~~~~~g~~~~~~~~~~~g~~~~G-~~aey~~vp~~~l~~~ 135 (198)
T 2eih_A 91 LSCGRCERCLAGEDNLCPRYQILGEHRHG-TYAEYVVLPEANLAPK 135 (198)
T ss_dssp ECCSCSHHHHTTCGGGCTTCEETTTSSCC-SSBSEEEEEGGGEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEEEECHHHEEEC
T ss_conf 36688543344333446444345666774-4225999626995889
No 45
>>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} (A:1-171,A:315-369)
Probab=60.00 E-value=7.3 Score=19.25 Aligned_cols=23 Identities=35% Similarity=0.546 Sum_probs=17.4
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|++||++.. .+++||+|...
T Consensus 85 vG~V~~VG~~V~---------~~kvGDrVgvg 107 (226)
T 1uuf_A 85 VGRVVAVGDQVE---------KYAPGDLVGVG 107 (226)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCEEE---------EECCCCCCCCC
T ss_conf 999999887133---------53134311233
No 46
>>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} (A:1-75)
Probab=59.96 E-value=13 Score=17.90 Aligned_cols=39 Identities=26% Similarity=0.298 Sum_probs=21.8
Q ss_pred CEEEEEEEECCCEEC------CCCCEEC-----------CEECCCCEEEEECCCCC
Q ss_conf 024799982387086------7887902-----------20313788997056860
Q gi|254780848|r 44 ASSGEIMWVGAGVMD------QSGKVIE-----------PEVSKGDIVLFGKWSGT 82 (111)
Q Consensus 44 ~~~G~VvavG~g~~~------~~G~~~p-----------~~vkvGD~Vl~~~~~g~ 82 (111)
...|.|++.-.+.|. ++|..+. ..+-+||+|.|....+.
T Consensus 10 ~~~G~Vi~~~~~~y~V~~~~~~~g~~~~c~~RG~lr~~~~~~~VGD~V~~~~~~~~ 65 (75)
T 1t9h_A 10 MPEGKIIKALSGFYYVLDESEDSDKVIQCRGRGIFRKNKITPLVGDYVVYQAENDK 65 (75)
T ss_dssp CCEEEEEEEETTEEEEEECSSSSCEEEEEESCSSCCSCCCCCCBTCEEEEECCTTS
T ss_pred CCCEEEEEEECCEEEEEECCCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEECCCC
T ss_conf 78708999999999999636888759999975321057998843369999977998
No 47
>>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NAD; 2.05A {Pyrococcus horikoshii OT3} PDB: 2dfv_A* 3gfb_A* (A:1-145,A:315-348)
Probab=59.46 E-value=7.4 Score=19.20 Aligned_cols=86 Identities=24% Similarity=0.342 Sum_probs=43.9
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCC----CCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 5178479999747542-----12255799457655465----30247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKP----SASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~----~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|-.+-|||+..-..- .+-.|. ..+......+ .-..|+|+++|+... .+++||+|......
T Consensus 26 ~p~~~eVlVrV~a~gIc~sD~~~~~G~-~~~~~~~~~p~VlGhE~vG~Vv~vG~~v~---------~~k~GdrVvv~~~~ 95 (179)
T 2d8a_A 26 KPGPGEVLIKVLATSICGTDLHIYEWN-EWAQSRIKPPQIXGHEVAGEVVEIGPGVE---------GIEVGDYVSVETHI 95 (179)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHTC-TTHHHHCCSSEECCCEEEEEEEEECTTCC---------SCCTTCEEEECCEE
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCC-CCCCCCCCCCEECCEEEECCCCCCCCCCC---------CCCCCCEEEEEEEE
T ss_conf 899898999999997788999997588-76666789985365564054222245662---------01359889997430
Q ss_pred C----------C-----EEEE----CC--CCEEEEEEHHHEEEEEE
Q ss_conf 6----------0-----8897----69--97799985301789984
Q gi|254780848|r 81 G----------T-----EIKL----ND--GEEYLVMQESDIMGIVV 105 (111)
Q Consensus 81 g----------~-----~v~~----~d--g~~y~i~~e~dIlavi~ 105 (111)
+ . ...+ .+ =.+|.++.++.++.+=+
T Consensus 96 ~~g~c~~c~~g~~~~c~~~~~~g~~~~Gg~aey~~vp~~~v~~iPd 141 (179)
T 2d8a_A 96 VCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPK 141 (179)
T ss_dssp CCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCT
T ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECHHHCCCCCC
T ss_conf 4788630147760103565130246677651368962587045865
No 48
>>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, target T1521, PSI, protein structure initiative; 2.60A {Escherichia coli} (A:1-37,A:160-261)
Probab=57.40 E-value=13 Score=17.82 Aligned_cols=36 Identities=31% Similarity=0.540 Sum_probs=29.7
Q ss_pred EEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCC
Q ss_conf 24799982387086788790220313788997056860
Q gi|254780848|r 45 SSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGT 82 (111)
Q Consensus 45 ~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~ 82 (111)
++|..+--|.|.|+-+..++| ||.||.++...|+-+
T Consensus 79 ~hg~~~l~gqgiy~l~~~w~~--~~~~~~~~~~~~~~~ 114 (139)
T 1rc6_A 79 EHGAYILSGQGVYNLDNNWIP--VKKGDYIFMGAYSLQ 114 (139)
T ss_dssp CEEEEEEESEEEEESSSCEEE--EETTCEEEECSSEEE
T ss_pred EEEEEEECCEEEEEECCEEEE--ECCCCEEEECCCCCE
T ss_conf 079999687899998999999--579989998999989
No 49
>>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolecular disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} (A:1-146,A:314-347)
Probab=51.89 E-value=10 Score=18.48 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=44.0
Q ss_pred CCCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 25178479999747542-----122557994576554653----024799982387086788790220313788997056
Q gi|254780848|r 9 LRPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 9 ikPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-.|--+-||||..-.-- ....|..-.+. ..|. -..|+|+++|++.. .+++||+|.....
T Consensus 26 P~p~~geVLVkv~a~gin~sD~~~~~G~~~~~~---~~P~IlGhE~~G~Vv~vG~~V~---------~~~~GdrVvv~~~ 93 (180)
T 2hcy_A 26 PKPKANELLINVKYSGVCHTDLHAWHGDWPLPV---KLPLVGGHEGAGVVVGMGENVK---------GWKIGDYAGIKWL 93 (180)
T ss_dssp CCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC---CSSEECCCEEEEEEEEECTTCC---------SCCTTCEEEECSE
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCC---CCCEECCCCEEEEEEECCCEEC---------CCCCCCCEEEEEE
T ss_conf 988989799999999768999999668988888---8882043000489984471512---------6547873366540
Q ss_pred CC-----------------------CEEEECCCCEEEEEEHHHEEEE
Q ss_conf 86-----------------------0889769977999853017899
Q gi|254780848|r 80 SG-----------------------TEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 80 ~g-----------------------~~v~~~dg~~y~i~~e~dIlav 103 (111)
.+ ..... -=.+|.++++..+..+
T Consensus 94 ~~~~~~~~~~~~g~~~~c~~~~~~G~~~~G-~~aEy~~vp~~~v~~i 139 (180)
T 2hcy_A 94 NGSCMACEYCELGNESNCPHADLSGYTHDG-SFQQYATADAVQAAHI 139 (180)
T ss_dssp EECCSSSTTTTTTCGGGCTTCEEBTTTBCC-SSBSEEEEETTTSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
T ss_conf 356664342333344556642345645556-5432233222112355
No 50
>>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinone reduction, structural genomics, structural genomics consortium, SGC; HET: NAP; 1.85A {Homo sapiens} (A:1-153,A:319-351)
Probab=50.14 E-value=14 Score=17.76 Aligned_cols=42 Identities=29% Similarity=0.400 Sum_probs=26.4
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC-CCCCEEEECCCCEEEEEEHHHEEE
Q ss_conf 479998238708678879022031378899705-686088976997799985301789
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK-WSGTEIKLNDGEEYLVMQESDIMG 102 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~-~~g~~v~~~dg~~y~i~~e~dIla 102 (111)
.|.|+++|++.. ..++||+|+..- ..|. + .+|.+++++.+.-
T Consensus 96 aGvVv~vG~~V~---------~~~~GdrV~~~~~~~G~---~---aeyvvv~~~~l~~ 138 (186)
T 1yb5_A 96 AGVIEAVGDNAS---------AFKKGDRVFTSSTISGG---Y---AEYALAADHTVYK 138 (186)
T ss_dssp EEEEEEECTTCT---------TCCTTCEEEESCCSSCS---S---BSEEEEEGGGEEE
T ss_pred EEEEECCCCCCC---------CCCCCCCCCCCCCCCCC---C---CCCCCCCHHHCCC
T ss_conf 789951564101---------22357532123222223---3---2011352541667
No 51
>>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* (A:1-143,A:329-357)
Probab=44.55 E-value=17 Score=17.24 Aligned_cols=48 Identities=25% Similarity=0.257 Sum_probs=28.6
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC----CCCC----------------E-----EEE-CCCCEEEEEEHHH
Q ss_conf 479998238708678879022031378899705----6860----------------8-----897-6997799985301
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK----WSGT----------------E-----IKL-NDGEEYLVMQESD 99 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~----~~g~----------------~-----v~~-~dg~~y~i~~e~d 99 (111)
.|+||++|.. .+|+||+|+..- +.|. - ... .--.+|.++..+.
T Consensus 66 vG~VV~~gv~-----------~~k~GDrV~~~~~~~~~~g~c~~c~~g~~~~c~~~~~~~~~~~~~~G~fAEy~~vp~~~ 134 (172)
T 2b5w_A 66 VGVVVDPNDT-----------ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKY 134 (172)
T ss_dssp EEEEEECTTS-----------SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGG
T ss_pred EEEEEEECCC-----------CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHEEEEECCC
T ss_conf 9999984234-----------53001045211124532222111223333434444100002556423000000221013
Q ss_pred EEEEE
Q ss_conf 78998
Q gi|254780848|r 100 IMGIV 104 (111)
Q Consensus 100 Ilavi 104 (111)
++-+=
T Consensus 135 v~~iP 139 (172)
T 2b5w_A 135 LVRIP 139 (172)
T ss_dssp EEECC
T ss_pred CCCCC
T ss_conf 34578
No 52
>>1dfa_A PI-SCEI endonuclease; intein, homing endonuclease, hydrolase; 2.00A {Saccharomyces cerevisiae} (A:1-43,A:431-454)
Probab=41.30 E-value=9.6 Score=18.58 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=22.2
Q ss_pred EEEEEECCCEECCCCCEECC-EECCCCEEEEECCCCCEEEECCCCEEE
Q ss_conf 79998238708678879022-031378899705686088976997799
Q gi|254780848|r 47 GEIMWVGAGVMDQSGKVIEP-EVSKGDIVLFGKWSGTEIKLNDGEEYL 93 (111)
Q Consensus 47 G~VvavG~g~~~~~G~~~p~-~vkvGD~Vl~~~~~g~~v~~~dg~~y~ 93 (111)
|+-|.+. +|...|. ++++||+|+=......++..- +..|+
T Consensus 5 GT~Ilta------DG~~kpIEdL~vGD~VlT~Dg~~~~V~wI-grr~~ 45 (67)
T 1dfa_A 5 GTNVLMA------DGSIECIENIEVGNKVMGKDGRPREVIKL-PRGYY 45 (67)
T ss_dssp TCEEEBT------TSCEEEGGGCCTTCCBBCTTSCBCCBCCC-CCEEC
T ss_pred CCEEECC------CCCEEEEEEECCCCEEECCCCCEEEEEEE-CCCEE
T ss_conf 6999868------99887887704499998679986689971-47769
No 53
>>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} (A:460-544)
Probab=36.91 E-value=31 Score=15.78 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=20.7
Q ss_pred CEECCCCEEEEECCC-----CC-EEEEC-CCCEEEEEEHHH
Q ss_conf 203137889970568-----60-88976-997799985301
Q gi|254780848|r 66 PEVSKGDIVLFGKWS-----GT-EIKLN-DGEEYLVMQESD 99 (111)
Q Consensus 66 ~~vkvGD~Vl~~~~~-----g~-~v~~~-dg~~y~i~~e~d 99 (111)
.+.++||+|++..|+ |. ++++. ...+|+.+.-.+
T Consensus 19 ~~l~~GD~VVh~~hGig~~~gi~~~~~~g~~~ey~~l~y~~ 59 (85)
T 2eyq_A 19 AELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYAN 59 (85)
T ss_dssp TTCCTTCEEEETTTEEEEEEEEEEEESSSCEEEEEEEECGG
T ss_pred HHCCCCCEEEEECCCHHHHCCEEEEECCCCCCCCEEEEECC
T ss_conf 32467746866012301010305530267767630356427
No 54
>>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=35.41 E-value=11 Score=18.22 Aligned_cols=22 Identities=18% Similarity=0.420 Sum_probs=17.0
Q ss_pred CCEECCCCEEEEECC-CCCEEEE
Q ss_conf 220313788997056-8608897
Q gi|254780848|r 65 EPEVSKGDIVLFGKW-SGTEIKL 86 (111)
Q Consensus 65 p~~vkvGD~Vl~~~~-~g~~v~~ 86 (111)
-+|++.||+||...+ .+++++-
T Consensus 51 ~vWIk~GD~VlV~~~~~~~k~k~ 73 (111)
T 2dgy_A 51 NIWIKRGDFLIVDPIEEGEKVKA 73 (111)
T ss_dssp CCCCCSSCEEEEEECSSCSSCCE
T ss_pred CEEEECCCEEEEEEHHHCCCCEE
T ss_conf 25794599999987354687349
No 55
>>2vsm_A NIV-G, hemagglutinin-neuraminidase; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein; HET: NAG; 1.8A {Nipah virus} PDB: 3d11_A* 3d12_A* 2vwd_A* 2vsk_A (A:89-316)
Probab=32.07 E-value=19 Score=16.90 Aligned_cols=16 Identities=19% Similarity=0.243 Sum_probs=12.5
Q ss_pred ECCCCEEEEECCCCCE
Q ss_conf 3137889970568608
Q gi|254780848|r 68 VSKGDIVLFGKWSGTE 83 (111)
Q Consensus 68 vkvGD~Vl~~~~~g~~ 83 (111)
+..+|+|+|+-|+|..
T Consensus 81 i~~~~~l~Fp~yGGl~ 96 (228)
T 2vsm_A 81 IKQGDTLYFPAVGFLV 96 (228)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEECCEEEEEEECCCC
T ss_conf 8999999998857832
No 56
>>2oqk_A Putative translation initiation factor EIF-1A; malaria, eukaryotic initiation factor (EIF), SGC, structural genomics; 1.80A {Cryptosporidium parvum iowa II} (A:)
Probab=28.83 E-value=17 Score=17.17 Aligned_cols=51 Identities=22% Similarity=0.113 Sum_probs=30.9
Q ss_pred CEEEEEEEEC-CCEE---CCCCCEE----------CCEECCCCEEEEECCCCCEEEECCCCEEEEEE
Q ss_conf 0247999823-8708---6788790----------22031378899705686088976997799985
Q gi|254780848|r 44 ASSGEIMWVG-AGVM---DQSGKVI----------EPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQ 96 (111)
Q Consensus 44 ~~~G~VvavG-~g~~---~~~G~~~----------p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~ 96 (111)
...|.|+++- .+.+ ..+|..+ -.|++.||+|+...+.+...+- + ..|++.+
T Consensus 33 e~~g~V~~~~G~~~~~V~~~dg~~~l~~ipgK~Rk~iwI~~GD~VlVe~~~~d~~kg-~-Iv~r~~~ 97 (117)
T 2oqk_A 33 QEYGQVQRXLGNGRLDAYCFDGQKRLCHIRGKXRKKVWVNPGDIVLVSLRDFQDSKG-D-IILKYTP 97 (117)
T ss_dssp EEEEEEEEEEETTEEEEEETTSCEEEEECCHHHHHHSCCCTTCEEEEEECTTCTTEE-E-EEEECCH
T ss_pred EEEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEECCCCCCCEE-E-EEEECCH
T ss_conf 289999997399789999889999999974212011798089999994325789689-9-9998899
No 57
>>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein; NMR {Homo sapiens} (A:)
Probab=28.57 E-value=33 Score=15.60 Aligned_cols=29 Identities=21% Similarity=0.118 Sum_probs=20.0
Q ss_pred CEECCCCEEEEECCCCCEEEECCCCEEEEEE
Q ss_conf 2031378899705686088976997799985
Q gi|254780848|r 66 PEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQ 96 (111)
Q Consensus 66 ~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~ 96 (111)
+|++.||+|+...+.+...+. + .-|++.+
T Consensus 68 iwI~~GD~VlVe~~~~~~~kg-~-Iv~r~~~ 96 (143)
T 1d7q_A 68 VWINTSDIILVGLRDYQDNKA-D-VILKYNA 96 (143)
T ss_dssp CCCCTTCEEEEECSSSSSSCC-E-EEEEECT
T ss_pred EEEECCCEEEEECCCCCCCEE-E-EEEECCH
T ss_conf 798079999994156768578-9-9997798
No 58
>>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} (A:1-73)
Probab=27.94 E-value=44 Score=14.92 Aligned_cols=37 Identities=16% Similarity=0.208 Sum_probs=21.6
Q ss_pred CEEEEEEEECCCEEC---CC-CCEEC-----------CEECCCCEEEEECCC
Q ss_conf 024799982387086---78-87902-----------203137889970568
Q gi|254780848|r 44 ASSGEIMWVGAGVMD---QS-GKVIE-----------PEVSKGDIVLFGKWS 80 (111)
Q Consensus 44 ~~~G~VvavG~g~~~---~~-G~~~p-----------~~vkvGD~Vl~~~~~ 80 (111)
...|.|++.=.+.|. ++ ++.+. ..+-+||+|.|....
T Consensus 10 ~~~G~Vi~~~~~~y~V~~~d~~~~~~c~~RG~lr~~~~~~~VGD~V~~~~~~ 61 (73)
T 1u0l_A 10 RRRGIVVSFHSNMVTVEDEETGERILCKLRGKFRLQNLKIYVGDRVEYTPDE 61 (73)
T ss_dssp CEEEEEEEEETTEEEEEETTTCCEEEEEECGGGTTTTCCCCTTCEEEEECCC
T ss_pred CCEEEEEEEECCEEEEEECCCCEEEEEEECCEECCCCCCCEECEEEEEEECC
T ss_conf 4117999997989999978999199999443220589980002089998878
No 59
>>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} (A:1-75)
Probab=26.26 E-value=33 Score=15.62 Aligned_cols=12 Identities=25% Similarity=0.227 Sum_probs=9.2
Q ss_pred EECCCCEEEEEC
Q ss_conf 031378899705
Q gi|254780848|r 67 EVSKGDIVLFGK 78 (111)
Q Consensus 67 ~vkvGD~Vl~~~ 78 (111)
.+++||||+..-
T Consensus 41 ev~vGD~VLVH~ 52 (75)
T 2ot2_A 41 QPRVGQWVLVHV 52 (75)
T ss_dssp CBCTTCEEEEET
T ss_pred CCCCCCEEEEEH
T ss_conf 467688999963
No 60
>>1v3e_A Hemagglutinin-neuraminidase glycoprotein; PIV3 HN, native+zanamavir, hexagonal, hydrolase; HET: NAG ZMR; 1.89A {Human parainfluenza virus 3} (A:112-336)
Probab=26.00 E-value=28 Score=15.99 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=22.1
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEEC
Q ss_conf 479998238708678879022031378899705686088976
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLN 87 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~ 87 (111)
.+..=+||.|.+ .+|+++|+-|+|.+...+
T Consensus 64 ~alYP~VGsGi~------------~~~~l~Fp~YGGl~~~s~ 93 (225)
T 1v3e_A 64 AALYPSVGPGIY------------YKGKIIFLGYGGLEHPIN 93 (225)
T ss_dssp EEEEECBSCCEE------------ETTEEEEEEEEEESSCCC
T ss_pred EEECCCCCCCEE------------ECCEEEEEECCCEECCCC
T ss_conf 997677666579------------999999988441307877
No 61
>>2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane structure, membrane protein, membrane; 3.45A {Escherichia coli} (A:111-181)
Probab=24.39 E-value=51 Score=14.54 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=18.5
Q ss_pred EECCCCEEEEECCCCCEEEECCCCEEEEEEH
Q ss_conf 0313788997056860889769977999853
Q gi|254780848|r 67 EVSKGDIVLFGKWSGTEIKLNDGEEYLVMQE 97 (111)
Q Consensus 67 ~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e 97 (111)
.+++||+|.+..+.|.-.++. -.+..++.
T Consensus 19 ~~~vGD~I~i~~~~G~V~~i~--l~~t~l~~ 47 (71)
T 2vv5_A 19 PFRAGEYVDLGGVAGTVLSVQ--IFSTTMRT 47 (71)
T ss_dssp SSCTTCEEESSSCEEEEEEEC--SSEEEEEC
T ss_pred CCCCCCEEEEECCEEEEEEEE--EEEEEEEC
T ss_conf 645665899704427899910--23676335
No 62
>>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* (A:1520-1642,A:1824-1881)
Probab=23.14 E-value=17 Score=17.17 Aligned_cols=15 Identities=20% Similarity=0.067 Sum_probs=10.3
Q ss_pred EECCCCEEEE-ECCCC
Q ss_conf 0313788997-05686
Q gi|254780848|r 67 EVSKGDIVLF-GKWSG 81 (111)
Q Consensus 67 ~vkvGD~Vl~-~~~~g 81 (111)
.+++||+|+. ..+++
T Consensus 87 ~~~~GDrV~g~~~~G~ 102 (181)
T 2vz8_A 87 RDASGRRVMGMVPAEG 102 (181)
T ss_dssp EETTSCCEEEECSSCC
T ss_pred CCCCCCEEEEECCCCC
T ss_conf 5689998998616995
No 63
>>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein structure initiative; 1.85A {Shewanella oneidensis mr-1} (A:1-73)
Probab=21.76 E-value=46 Score=14.78 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=17.3
Q ss_pred EEEEEECC-C--EE-CCCCCE-------ECCEECCCCEEEEE
Q ss_conf 79998238-7--08-678879-------02203137889970
Q gi|254780848|r 47 GEIMWVGA-G--VM-DQSGKV-------IEPEVSKGDIVLFG 77 (111)
Q Consensus 47 G~VvavG~-g--~~-~~~G~~-------~p~~vkvGD~Vl~~ 77 (111)
|+|+++-+ + +. +-.|.. +|-.+++||+||..
T Consensus 28 ~kIveI~~~~~~A~Vd~~Gv~ReVsl~Lv~e~v~vGDyVLVH 69 (73)
T 3d3r_A 28 SQVVAVDNERQSVTVDTLGVRRDVSSHLXTEPLAIGDYVLIH 69 (73)
T ss_dssp EEEEEEETTTTEEEEEETTEEEEEECTTBSSCCCTTCEEEEE
T ss_pred EEEEEECCCCCEEEEECCCEEEEEEHHHCCCCCCCCCEEEEE
T ss_conf 499999199888999679959999821245888899799996
No 64
>>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyamines, parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} (A:1-60,A:280-424)
Probab=21.67 E-value=53 Score=14.44 Aligned_cols=51 Identities=22% Similarity=0.248 Sum_probs=27.8
Q ss_pred EEEECCCEECCC--C-CEECCEECCCCEEEEECCCCCEE----EEC---CCCEEEEEEHHH
Q ss_conf 998238708678--8-79022031378899705686088----976---997799985301
Q gi|254780848|r 49 IMWVGAGVMDQS--G-KVIEPEVSKGDIVLFGKWSGTEI----KLN---DGEEYLVMQESD 99 (111)
Q Consensus 49 VvavG~g~~~~~--G-~~~p~~vkvGD~Vl~~~~~g~~v----~~~---dg~~y~i~~e~d 99 (111)
..=.||.+..-+ + +...+.+++|||++|..-++.-+ .|+ --..|++..+.+
T Consensus 134 ~sI~GPtCd~~D~i~~~~~LP~L~vGDwL~f~n~GAYt~~~ss~FNgf~~p~vv~v~~~~~ 194 (205)
T 7odc_A 134 SSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMSRPM 194 (205)
T ss_dssp EEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGGCCCCEEEEEEEHHH
T ss_pred EEEEECCCCCCCEECCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCEEEEEECCC
T ss_conf 9999738688768863445788999999999198852376546667999984899995896
No 65
>>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal binding protein; HET: PG4; 1.80A {Thermococcus kodakarensis} (A:)
Probab=21.45 E-value=59 Score=14.21 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=18.2
Q ss_pred EEEEEECCCEEC--CCCCEEC------CEECCCCEEEEEC
Q ss_conf 799982387086--7887902------2031378899705
Q gi|254780848|r 47 GEIMWVGAGVMD--QSGKVIE------PEVSKGDIVLFGK 78 (111)
Q Consensus 47 G~VvavG~g~~~--~~G~~~p------~~vkvGD~Vl~~~ 78 (111)
++|+++..+.-. -.|.... .++++||||+..-
T Consensus 7 ~kVv~i~~~~A~vd~~G~~r~v~l~lv~e~~vGD~VLvh~ 46 (75)
T 2z1c_A 7 GKVIEVNGPVAVVDFGGVKREVRLDLMPDTKPGDWVIVHT 46 (75)
T ss_dssp EEEEEEETTEEEEEETTEEEEEECTTSTTCCTTCEEEEET
T ss_pred EEEEEECCCEEEEEECCEEEEEEEEEECCCCCCCEEEEEE
T ss_conf 6999987998999809949999998608899898999940
No 66
>>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* (A:649-731)
Probab=20.99 E-value=54 Score=14.40 Aligned_cols=27 Identities=15% Similarity=0.144 Sum_probs=20.2
Q ss_pred CCCCEEEEEECCCCCCCCCCEEEECCCC
Q ss_conf 1784799997475421225579945765
Q gi|254780848|r 11 PTRGRVVVRRLQSEIKTATGNILIPDTV 38 (111)
Q Consensus 11 Pl~drVLVk~~~~e~~T~~GgI~lp~~~ 38 (111)
-+|+.+||.|.-.+..|.. -++||...
T Consensus 25 m~G~~lLVaPV~~~~~~~~-~vylP~g~ 51 (83)
T 3l4y_A 25 LWGPGLLITPVLDEGAEKV-MAYVPDAV 51 (83)
T ss_dssp EETTTEEEECCCSTTCSEE-EEEECSSC
T ss_pred ECCCCEEEECCCCCCCEEE-EEECCCCE
T ss_conf 6359779910114895489-99999982
No 67
>>1e8u_A HN, hemagglutinin-neuraminidase; sialidase; HET: SLB NAG NDG; 2.0A {Newcastle disease virus} (A:)
Probab=20.08 E-value=43 Score=14.94 Aligned_cols=14 Identities=21% Similarity=0.266 Sum_probs=8.0
Q ss_pred CCCCEEEEECCCCC
Q ss_conf 13788997056860
Q gi|254780848|r 69 SKGDIVLFGKWSGT 82 (111)
Q Consensus 69 kvGD~Vl~~~~~g~ 82 (111)
..+|+|+|+-|+|.
T Consensus 184 ~~~~~l~Fp~YGGl 197 (454)
T 1e8u_A 184 FIDGRVWFSVYGGL 197 (454)
T ss_dssp EETTEEEEEEEEEE
T ss_pred EECCEEEEEEECCC
T ss_conf 99999999875786
Done!