>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.

Probab=100.00 E-value=0 Score=733.35 Aligned_cols=473 Identities=23% Similarity=0.303 Sum_probs=384.3 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC Q ss_conf 79899999999999999997736789863598885899838832088877760347852257889999999866255188 Q gi|254780849|r 8 LGTAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHFHEVGARMIRDVATNTEDSSGD 87 (551) Q Consensus 8 ~g~~a~~~~~~~~~~ia~~i~ttlGP~G~~kmi~~~~g~~~iTnDGaTIlk~l~~~hp~~~~~akll~~~a~~qd~~~GD 87 (551) T Consensus 5 ~G~~ar~~~i~a~~~la~~vktTlGP~G~~k~i~~~~G~~~ITnDG~TI~k~i~l~~P----~Akll~e~a~~q~~~~GD 80 (527) T cd03335 5 SGQDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP----AAKILVELAQLQDKEVGD 80 (527) T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCCH----HHHHHHHHHHHHHHHHCC T ss_conf 4799999999999999999737759887738999899995896759999986757697----999999999961446468 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHCCC--CHHHHHHHHHHHHHH------HHH Q ss_conf 6667999999999999999976988999999898644777767653-2221276--024222122555334------568 Q gi|254780849|r 88 GTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLAVQEVVEYLKA-NHKKVGS--REEIIQVATISANGD------REI 158 (551) Q Consensus 88 GTTtvvvLa~eLL~~a~~Li~~gihP~~Ii~G~~~a~~~al~~L~~-~s~~i~~--~~~L~~vA~tS~~~~------~~l 158 (551) T Consensus 81 GTTtavvLa~~ll~~~~~li~~G~~P~~Ii~G~~~a~~~~~~~l~~~l~~~~~~~~~~~l~~va~tsl~sK~~~~~~e~l 160 (527) T cd03335 81 GTTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSDFF 160 (527) T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 77789999999999999999879998999999999999999999997410355327899999999886116555568888 Q ss_pred HHHHHHHHHHCCC-----------CCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCC Q ss_conf 8899999984243-----------20001101465520333302320011224765423310134441131022013564 Q gi|254780849|r 159 GEKIAYAMEQIGP-----------HGIITIDQAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKI 227 (551) Q Consensus 159 ~~li~~A~~~i~~-----------d~vi~i~~~~~~~~d~~li~G~~id~g~~~~~fi~~~~~~~~~~~n~~Ili~d~~L 227 (551) T Consensus 161 ~~l~~~a~~~v~~~~~~~~~~~~~~~i~i~~~~g~~~~~s~li~G~~~~~~~~~~-------~m~~~~~n~ki~lld~~l 233 (527) T cd03335 161 ANMVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKESYLVNGYALNCTRASQ-------GMPTRVKNAKIACLDFNL 233 (527) T ss_pred HHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCEEECEEECCEEECCCCCCC-------CCCEECCCCEEEEECCCC T ss_conf 7888989987523577775201036449999648721004456147851333576-------553031155455313430 Q ss_pred CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECC-------------CCCCHHHHHH--HHHHHHH Q ss_conf 410011146775311162122222333588886531213568323222-------------2123056766--9988652 Q gi|254780849|r 228 SALQPLLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLA-------------VKAPAFGDRR--KEVLRDI 292 (551) Q Consensus 228 e~~~~~~~~le~~~~~~~~l~ii~~~~e~~~l~~lv~n~~k~gi~v~~-------------vk~~~~~~~~--~~~L~di 292 (551) T Consensus 234 ~~~k~~~~~~i~i~~~~~~~~~--~~~e~~~~~~~v~~i~~~g~~vv~~~~gI~d~~~~~l~~~~i~~~~~v~~~dl~~i 311 (527) T cd03335 234 QKTKMKLGVQVVVTDPEKLEKI--RQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEAGAMAVRRVKKEDLRRI 311 (527) T ss_pred HHHHCCCCCEEEECCHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCEECCCCHHHHHHH T ss_conf 2221035744895388999999--99899999999999985477624320571238999998759831223679899999 Q ss_pred HHHCCCCCCCHHHCCCCC-CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC Q ss_conf 110112332101063221-1222224410278980467301377421777765433467765413563111101222102 Q gi|254780849|r 293 AAVVGATVISEEIGLKLE-KATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYDRDKLKERLAK 371 (551) Q Consensus 293 a~~tGa~vi~~~~~~~l~-~~~~~~LG~~~~v~i~~~~~~ii~~~~~~~~i~~~i~~l~~~ie~~~~~~~~~~~~er~~~ 371 (551) T Consensus 312 a~~tga~ii~~~~~~~~~e~~~~~~lG~~~~v~~~~i~-------------------------------~~~~~~~~~~~ 360 (527) T cd03335 312 AKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIG-------------------------------DDELILIKGTK 360 (527) T ss_pred HHHHCCEEECCCCCCCCCCCCCHHHCCCCCEEEEEEEC-------------------------------CCEEEEEECCC T ss_conf 99859988414446651002476550656528999966-------------------------------83699997467 Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHH Q ss_conf 334432125676531468989887788999987540278-105553799999999745089--96899999999999999 Q gi|254780849|r 372 LAGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAASDEG-IVPGGGIALVRAAQALSVKGD--NEDQCAGIEIVRKALSY 448 (551) Q Consensus 372 l~g~~~tI~vgg~t~~~~~E~~r~~~DAl~v~~~~~~~~-vvpGGGa~e~~ls~~l~~~~~--~~~~~~~i~~fa~AL~~ 448 (551) T Consensus 361 ~~-~~~tIii~G~te~~~~E~~~~i~DAl~a~k~a~~eg~ivpGGGa~e~~ls~~l~~~~~~~~~~~q~~i~~~a~Al~~ 439 (527) T cd03335 361 KR-SSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQLAIAEFAEALLV 439 (527) T ss_pred CC-CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH T ss_conf 88-64799996886225999999888899999999867986126609999999999998611682788999999999899 Q ss_pred HHHHHHHHCCCCHHHHHHHHHHCCC-----------CCEEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999779998999999981689-----------86658866872721388398370478999999999999986609 Q gi|254780849|r 449 PCRQIIKNAGDESELIVSKIQESKT-----------ANYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLIT 517 (551) Q Consensus 449 ip~~La~NaG~d~~~~i~~l~~~~~-----------~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~iLri 517 (551) T Consensus 440 ip~~La~NAG~d~~~vv~~L~~~h~~~~~~~~~~~~~~~G~d~~~g~~~Dm~~~gIiDp~~vk~~al~~A~e~a~~iL~i 519 (527) T cd03335 440 IPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLINGKVRDNLEAGVLEPTVSKIKSLKFATEAAITILRI 519 (527) T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999997799799999999976401222211357775658657994847886878316999999999999999999989 Q ss_pred HHHHHCCC Q ss_conf 99971587 Q gi|254780849|r 518 EAVVVDAP 525 (551) Q Consensus 518 D~iI~~~~ 525 (551) T Consensus 520 D~iI~~~p 527 (527) T cd03335 520 DDLIKLNP 527 (527) T ss_pred HHHHHCCC T ss_conf 99985186

HHsearch alignment for GI: 254780849 and conserved domain: cd03335