>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.

Probab=100.00 E-value=0 Score=740.66 Aligned_cols=486 Identities=22% Similarity=0.298 Sum_probs=389.9 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 98999999999999999977367898635988858998388320888777603478522578899999998662551886 Q gi|254780849|r 9 GTAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHFHEVGARMIRDVATNTEDSSGDG 88 (551) Q Consensus 9 g~~a~~~~~~~~~~ia~~i~ttlGP~G~~kmi~~~~g~~~iTnDGaTIlk~l~~~hp~~~~~akll~~~a~~qd~~~GDG 88 (551) T Consensus 14 g~~a~~~ni~a~~~lad~vktTLGPkG~~k~i~~~~G~~~ITnDG~TI~k~i~l~~P----~Akll~e~a~~q~~~~GDG 89 (522) T cd03340 14 GKGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHP----AAKTLVDIAKSQDAEVGDG 89 (522) T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCCH----HHHHHHHHHHHHHHHCCCC T ss_conf 799999999999999999747759887849998899982796578999887357698----9999999998400130687 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHH------H Q ss_conf 66799999999999999997698899999989864477776765322212760------24222122555334------5 Q gi|254780849|r 89 TTTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLAVQEVVEYLKANHKKVGSR------EEIIQVATISANGD------R 156 (551) Q Consensus 89 TTtvvvLa~eLL~~a~~Li~~gihP~~Ii~G~~~a~~~al~~L~~~s~~i~~~------~~L~~vA~tS~~~~------~ 156 (551) T Consensus 90 TTt~vvLa~ell~~~~~li~~G~~p~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~~~~~~~l~~va~tsl~sK~~~~~~~ 169 (522) T cd03340 90 TTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIASEKE 169 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 47899999999999999998799847999999999999999999843137786366699999999898850045321378 Q ss_pred HHHHHHHHHHHHCCCCC---HHHH-CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCC Q ss_conf 68889999998424320---0011-0146552033330232001122476542331013444113102201356441001 Q gi|254780849|r 157 EIGEKIAYAMEQIGPHG---IITI-DQAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKISALQP 232 (551) Q Consensus 157 ~l~~li~~A~~~i~~d~---vi~i-~~~~~~~~d~~li~G~~id~g~~~~~fi~~~~~~~~~~~n~~Ili~d~~Le~~~~ 232 (551) T Consensus 170 ~l~~li~~Av~~v~~~~~~~~I~i~ki~gg~~~ds~lv~G~~~~~~~~~~~~----~~~~~~~~~~~Ill~~~~le~~~~ 245 (522) T cd03340 170 FFAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDSQLVNGVAFKKTFSYAGF----EQQPKKFKNPKILLLNVELELKAE 245 (522) T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEECCEEECCEEEEECCCCCCC----CCCCCCCCCCEEEEECHHHHHHHC T ss_conf 9889999999984556876548999953884002268603788614555440----028620368613530105666421 Q ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC Q ss_conf 11467753111621222223335888865312135683232222123056766998865211011233210106322112 Q gi|254780849|r 233 LLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKEVLRDIAAVVGATVISEEIGLKLEKA 312 (551) Q Consensus 233 ~~~~le~~~~~~~~l~ii~~~~e~~~l~~lv~n~~k~gi~v~~vk~~~~~~~~~~~L~dia~~tGa~vi~~~~~~~l~~~ 312 (551) T Consensus 246 ~~~~~i~i~~~~~~~~~~--~~e~~~i~~~~~~i~~~g~~vvi~~~~-i~d~~~~~l~~~~I~~~~~v~~~d----l~~i 318 (522) T cd03340 246 KDNAEVRVEDPEEYQAIV--DAEWKIIYDKLEKIVKSGANVVLSKLP-IGDLATQYFADRDIFCAGRVPEED----LKRV 318 (522) T ss_pred CCCCEEEECCHHHHHHHH--HHHHHHHHHHHHHHHHHCCCEEECCCC-CCHHHHHHHHHCCCEEECCCCHHH----HHHH T ss_conf 557605854879999999--999999999999987526757831687-645899998764864423157888----8899 Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 22224410278980467301377421777765433467765413563111101222102334432125676531468989 Q gi|254780849|r 313 TIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYDRDKLKERLAKLAGGVAVLEVGDVTEAALGEK 392 (551) Q Consensus 313 ~~~~LG~~~~v~i~~~~~~ii~~~~~~~~i~~~i~~l~~~ie~~~~~~~~~~~~er~~~l~g~~~tI~vgg~t~~~~~E~ 392 (551) T Consensus 319 ~~~tg~~i~~-~~~~~----------~~~~lG~~~~----~e~~~i~~~~~~~~~~~~~--~~~~tiiirg~t~~~l~e~ 381 (522) T cd03340 319 AQATGGSIQT-TVSNI----------TDDVLGTCGL----FEERQVGGERYNIFTGCPK--AKTCTIILRGGAEQFIEEA 381 (522) T ss_pred HHHCCCEEEE-ECCCC----------CHHHCCCCCC----EEEEEECCEEEEHHCCCCC--CCCEEEEEECCCHHHHHHH T ss_conf 9864886886-21667----------5665154232----4798865474201305555--5645999966718899999 Q ss_pred HHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH Q ss_conf 887788999987540278-105553799999999745089--96899999999999999999999977999899999998 Q gi|254780849|r 393 KDRYQDSLDATRAASDEG-IVPGGGIALVRAAQALSVKGD--NEDQCAGIEIVRKALSYPCRQIIKNAGDESELIVSKIQ 469 (551) Q Consensus 393 ~r~~~DAl~v~~~~~~~~-vvpGGGa~e~~ls~~l~~~~~--~~~~~~~i~~fa~AL~~ip~~La~NaG~d~~~~i~~l~ 469 (551) T Consensus 382 er~l~DAl~a~k~a~~~~~iVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~a~AL~~ip~~La~NAG~d~~~vv~~L~ 461 (522) T cd03340 382 ERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQLVINAFAKALEIIPRQLCDNAGFDATDILNKLR 461 (522) T ss_pred HHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH T ss_conf 99888899999999858987427619999999999997456885789999999999999999999986977999999999 Q ss_pred HCCC----CCEEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 1689----86658866872721388398370478999999999999986609999715877 Q gi|254780849|r 470 ESKT----ANYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLITEAVVVDAPK 526 (551) Q Consensus 470 ~~~~----~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~iLriD~iI~~~~~ 526 (551) T Consensus 462 ~~h~~~~~~~~G~d~~~g~~~dm~~~GIiDP~~Vk~~al~~A~~vA~~iL~iD~iI~~~~s 522 (522) T cd03340 462 QKHAQGGGKWYGVDINNEGIADNFEAFVWEPSLVKINALTAATEAACLILSVDETIKNPKS 522 (522) T ss_pred HHHHCCCCCCEEEECCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 9985579985779778993726785768365899999999799999999989999937899

HHsearch alignment for GI: 254780849 and conserved domain: cd03340