RPSBLAST alignment for GI: 254780849 and conserved domain: TIGR02339
>gnl|CDD|162810 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs. Length = 519
Score = 92.5 bits (230), Expect = 2e-19
Identities = 134/551 (24%), Positives = 225/551 (40%), Gaps = 96/551 (17%)
Query: 10 TAARDAIAYGV---NTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHF 66
T RDA + +AEAVK TLGP+G ++ +S G +T DG T+ K + ++
Sbjct: 12 TKGRDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHP- 70
Query: 67 HEVGARMIRDVATNTEDSSGDGTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLAVQE 126
A+M+ +VA + GDGTTTA LA + + + G++P I G A ++
Sbjct: 71 ---AAKMLVEVAKTQDAEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEK 127
Query: 127 VVEYLKANHKKVG--SREEIIQVATISANGD-------REIGEKIAYAMEQIGPH----- 172
+E + K+ R+ + +VA S G ++ + A++Q+
Sbjct: 128 ALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEVTKDKLANLVVEAVKQVAEKRGDGK 187
Query: 173 ------GIITIDQAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKK 226
I + + + +V+G+ +D+ + P M V+N I + D
Sbjct: 188 YYVDLDNIKIEKKTGGSIDDTELVEGIVVDKEPVHP-------GMPKRVKNAKIALLDAP 240
Query: 227 ISALQPLLPI---LESATQSGRPLCIIAEDVEG--DALATLVVNRVRC--GLPVLA---- 275
+ + + + Q + L ++ D +A N V C G+ LA
Sbjct: 241 LEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYL 300
Query: 276 VKAPAFGDRR--KEVLRDIAAVVGATVISEEIGLKLEKATIADLGSAKKVVMSKDDTTIV 333
KA RR K + +A GA ++S +++ T +DLG A V K
Sbjct: 301 AKAGILAVRRVKKSDIEKLARATGAKIVSS-----IKEITESDLGYAGLVEERKV----- 350
Query: 334 GGNGPSERIEGRINEIQKAIEDTKSDYDRDKLKERLAKLAGGVAVLEVGDVTEAALGEKK 393
G+ +EG K V +L G TE + E +
Sbjct: 351 -GDDKMTFVEG-------------------------CKNPKAVTILLRGG-TEHVVDELE 383
Query: 394 DRYQDSLDATRAASDEG-IVPGGG-----IALVRAAQALSVKGDNEDQCAGIEIVRKALS 447
QD+L +A ++G +V GGG +AL + A + G +Q A IE AL
Sbjct: 384 RSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKIGG--REQLA-IEAFADALE 440
Query: 448 YPCRQIIKNAGDESELIVSKIQ---ESKTANYGYNAQKSVFGDMFEMGIIDPVKVVRNAL 504
R + +NAG + + +++ E N G N DM E+G+I+P++V A+
Sbjct: 441 EIPRILAENAGLDPIDALVELRAKHEKGNKNAGINVFTGEIEDMLELGVIEPLRVKEQAI 500
Query: 505 QSAGSLAGMML 515
+SA A M+L
Sbjct: 501 KSATEAATMIL 511