RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780851|ref|YP_003065264.1| hypothetical protein
CLIBASIA_03730 [Candidatus Liberibacter asiaticus str. psy62]
         (64 letters)



>gnl|CDD|177376 PHA02541, 23, major capsid protein; Provisional.
          Length = 518

 Score = 25.5 bits (56), Expect = 3.4
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)

Query: 1   MLFWRREIYRWVNLVT--GKIANLYLQKIETKDDKFEYCDVWNGQTRNW 47
           ML   RE+  W+N     GK  N   Q +  K   F++ D  +G+   W
Sbjct: 297 MLEINREVVDWINYTAQVGKSGN--TQTVGAKAGVFDFQDPIDGRGARW 343


>gnl|CDD|177966 PLN02332, PLN02332, membrane bound O-acyl transferase (MBOAT)
           family protein.
          Length = 465

 Score = 24.2 bits (53), Expect = 8.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 39  VWNGQTRNWLREVV 52
           VWN Q   WLR  V
Sbjct: 318 VWNIQVSTWLRHYV 331


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.326    0.140    0.478 

Gapped
Lambda     K      H
   0.267   0.0692    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 1,067,749
Number of extensions: 47538
Number of successful extensions: 133
Number of sequences better than 10.0: 1
Number of HSP's gapped: 133
Number of HSP's successfully gapped: 6
Length of query: 64
Length of database: 5,994,473
Length adjustment: 35
Effective length of query: 29
Effective length of database: 5,238,193
Effective search space: 151907597
Effective search space used: 151907597
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.1 bits)