RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780851|ref|YP_003065264.1| hypothetical protein
CLIBASIA_03730 [Candidatus Liberibacter asiaticus str. psy62]
         (64 letters)



>d1fdqa_ b.60.1.2 (A:) Brain fatty acid binding protein {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 131

 Score = 23.3 bits (50), Expect = 5.3
 Identities = 7/27 (25%), Positives = 14/27 (51%)

Query: 27  IETKDDKFEYCDVWNGQTRNWLREVVG 53
           +    DK  +   W+G+  N++RE+  
Sbjct: 84  VSLDGDKLVHIQKWDGKETNFVREIKD 110


>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit
          (Oryctolagus cuniculus) [TaxId: 9986]}
          Length = 551

 Score = 22.6 bits (48), Expect = 9.6
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 5  RREIYRWVNLVTGKIANLYLQKIET--KDDKF 34
          RR++Y+W +   G I N+   K+     D++F
Sbjct: 24 RRKLYQWGSWKEGLILNVAGSKLTDLPVDERF 55


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.140    0.478 

Gapped
Lambda     K      H
   0.267   0.0562    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 279,648
Number of extensions: 10175
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 9
Length of query: 64
Length of database: 2,407,596
Length adjustment: 33
Effective length of query: 31
Effective length of database: 1,954,506
Effective search space: 60589686
Effective search space used: 60589686
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.3 bits)