HHsearch alignment for GI: 254780852 and conserved domain: MTH00060
>MTH00060 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=99.85 E-value=4.4e-21 Score=130.70 Aligned_cols=97 Identities=27% Similarity=0.486 Sum_probs=80.8
Q ss_pred HHHHHHHHHHCC--CCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 999999997156--789832417444313000434766524799999999998759999979999960243899999999
Q gi|254780852|r 23 IVLMISPFIVAF--KSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFPWAVYFKQITWLGFGSMMV 100 (121)
Q Consensus 23 ~~~~~~s~~l~~--~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~Pw~~~~~~~~~~~~~~~~~ 100 (121)
T Consensus 17 li~~f~~~~~n~~~~~~~~~W~SsyECGF~s~~~~~n~FS~tyf~llV~FViFDLEISLLLn~p~--qg~~~~nf~~y~~ 94 (116)
T MTH00060 17 LIYFFHSGLWNLKIGSGGFSWVSSFECGFLSHGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPF--QGVLFGNFWYYYF 94 (116)
T ss_pred HHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCEEHHHHHHHHH
T ss_conf 99999888844765554514705031205676102136416789999999998889999754522--5621676999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999999999999983575789
Q gi|254780852|r 101 FLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 101 F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 95 FL~~L~~Gf~~E~~~Gyv~W~ 115 (116)
T MTH00060 95 FLLLLFLGFVVELLSGYVRWV 115 (116)
T ss_pred HHHHHHHHHHHHHHCCEEEEE
T ss_conf 999999999997661667850