HHsearch alignment for GI: 254780852 and conserved domain: MTH00060

>MTH00060 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=99.85  E-value=4.4e-21  Score=130.70  Aligned_cols=97  Identities=27%  Similarity=0.486  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHCC--CCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             999999997156--789832417444313000434766524799999999998759999979999960243899999999
Q gi|254780852|r   23 IVLMISPFIVAF--KSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFPWAVYFKQITWLGFGSMMV  100 (121)
Q Consensus        23 ~~~~~~s~~l~~--~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~Pw~~~~~~~~~~~~~~~~~  100 (121)
T Consensus        17 li~~f~~~~~n~~~~~~~~~W~SsyECGF~s~~~~~n~FS~tyf~llV~FViFDLEISLLLn~p~--qg~~~~nf~~y~~   94 (116)
T MTH00060         17 LIYFFHSGLWNLKIGSGGFSWVSSFECGFLSHGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPF--QGVLFGNFWYYYF   94 (116)
T ss_pred             HHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCEEHHHHHHHHH
T ss_conf             99999888844765554514705031205676102136416789999999998889999754522--5621676999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCC
Q ss_conf             999999999999983575789
Q gi|254780852|r  101 FLGILTVGFIYEWKKGALEWD  121 (121)
Q Consensus       101 F~~iL~~gl~yew~~G~L~W~  121 (121)
T Consensus        95 FL~~L~~Gf~~E~~~Gyv~W~  115 (116)
T MTH00060         95 FLLLLFLGFVVELLSGYVRWV  115 (116)
T ss_pred             HHHHHHHHHHHHHHCCEEEEE
T ss_conf             999999999997661667850