HHsearch alignment for GI: 254780852 and conserved domain: MTH00113
>MTH00113 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00 E-value=1.2e-40 Score=233.43 Aligned_cols=111 Identities=44% Similarity=0.853 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHH
Q ss_conf 9999999999999999999997156789832417444313000434766524799999999998759999979--99996
Q gi|254780852|r 10 PILVFMAIASAIVIVLMISPFIVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFP--WAVYF 87 (121)
Q Consensus 10 ~ili~~~~~~~~~~~~~~~s~~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~P--w~~~~ 87 (121)
T Consensus 2 ~il~~~~i~~~l~~il~~l~~ll~~~~~~~eK~spyECGf~p~~~~r~~Fsi~FyliailFlIFDvEiv~l~P~~w~~~~ 81 (115)
T MTH00113 2 NLTFMLTLSLALSTILTTLNFWLAQTKPDIEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQL 81 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 08999999999999999999996778998313887076869767778766629999999999999999999528999986
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 0243899999999999999999999983575789
Q gi|254780852|r 88 KQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 88 ~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 82 ~~~-~~~~~~~~~Fl~iL~~G~~YeW~~GaL~W~ 114 (115)
T MTH00113 82 NSP-TTTLTWATIILLLLTLGLIYEWLQGGLEWA 114 (115)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 326-999999999999999999999986863658