HHsearch alignment for GI: 254780852 and conserved domain: MTH00148
>MTH00148 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00 E-value=1.6e-41 Score=238.14 Aligned_cols=112 Identities=39% Similarity=0.760 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 999999999999999999999715678-983241744431300043476652479999999999875999997999996-
Q gi|254780852|r 10 PILVFMAIASAIVIVLMISPFIVAFKS-PDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFPWAVYF- 87 (121)
Q Consensus 10 ~ili~~~~~~~~~~~~~~~s~~l~~~~-~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~Pw~~~~- 87 (121)
T Consensus 2 ~i~i~l~~~~~i~~i~~~~~~~l~~k~~~~~eK~spyECGf~p~~~~r~~Fsi~FfliailFLiFDvEiv~l~P~~~~~~ 81 (116)
T MTH00148 2 TILLSLFILLILNVVLLGLGLVLSKRSNSDREKNSPFECGFDPSSSARSPFSMRFFLLAILFLIFDVEIVLLFPLLSNIM 81 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 59999999999999999999997577899866478837798999877887750279999999999999999989999994
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 0243899999999999999999999983575789
Q gi|254780852|r 88 KQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 88 ~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 82 ~~~~~~~~~~~~~Fl~iL~~Gl~yeW~~G~L~W~ 115 (116)
T MTH00148 82 NSVSHWGLTSSLIFLLILLLGLFHEWNEGSLDWM 115 (116)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 1647999999999999999999999985751338