HHsearch alignment for GI: 254780852 and conserved domain: PRK06602
>PRK06602 NADH dehydrogenase subunit A; Validated.
Probab=100.00 E-value=0 Score=277.54 Aligned_cols=121 Identities=55% Similarity=1.124 Sum_probs=120.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96786537999999999999999999999971567898324174443130004347665247999999999987599999
Q gi|254780852|r 1 MSDLLTSYAPILVFMAIASAIVIVLMISPFIVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFL 80 (121)
Q Consensus 1 m~~~~~~y~~ili~~~~~~~~~~~~~~~s~~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l 80 (121)
T Consensus 1 m~~~~~~y~~i~i~~~~~~~i~~~~l~~~~ll~~~~~~~~K~spyECG~~p~~~~r~~Fsi~fylvailFliFDvEivfl 80 (121)
T PRK06602 1 MTEVLAHYLPFLIFLIVAIGLGILLLVAGKLLGPRAPDREKLSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLETAFL 80 (121)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 97689989999999999999999999999994789999655887377979988877665669899999999999999999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 79999960243899999999999999999999983575789
Q gi|254780852|r 81 FPWAVYFKQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 81 ~Pw~~~~~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 81 ~Pwav~~~~~g~~~~~~~~~Fl~iL~~g~~Yew~kG~L~We 121 (121)
T PRK06602 81 FPWAVSFREIGWLGFIEAMIFIAVLLVGLVYEWRKGALEWE 121 (121)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999983230999999999999999999999981767889