HHsearch alignment for GI: 254780853 and conserved domain: COG0377
>COG0377 NuoB NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion].
Probab=100.00 E-value=0 Score=499.99 Aligned_cols=155 Identities=70% Similarity=1.169 Sum_probs=150.1
Q ss_pred HHHHHHHHCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCHHHCCEEECCCCCCCCEEEEECCCCHHHH
Q ss_conf 76675410876885599998456128834775235465213566336667867648487068220607997141345569
Q gi|254780853|r 28 RISSEITHKGFLVTSVDQLVTWARTGSLMWMTFGLACCAVEMMQASMPRYDLERFGFAPRASPRQSDVMIVAGTLTNKMA 107 (185)
Q Consensus 28 ~~~~~~~~~~~i~t~~d~l~nW~R~~Slwp~~fg~aCC~iE~~a~~~p~yD~eRfG~~~~~sPRqADvliVtG~vT~km~ 107 (185)
T Consensus 11 ~~~~~~~~~~~~~t~~~~l~~W~r~~SLWp~~fg~aCC~vEm~~~~~~r~D~eRfG~~~r~SPRQaDvmIvaGt~t~Kma 90 (194)
T COG0377 11 DPVEALLSKGVLLTKVDKLINWGRKNSLWPVTFGLACCAVEMMATFASRYDLERFGEVPRASPRQADLMIVAGTLTNKMA 90 (194)
T ss_pred CHHHHHHCCCEEEECHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHH
T ss_conf 04777631474652318888665314542566511368888787406655788717677899651357999353328788
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999984686661998535566886347887220772223223067488768989999999999999964126
Q gi|254780853|r 108 SALRRVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGILLLQKKIRRVGN 182 (185)
Q Consensus 108 ~~l~~~yeqmpePK~ViA~G~Ca~sGG~f~~sY~v~~g~d~~iPVDvyVPGCPPrPeail~gl~~L~~ki~~~~~ 182 (185)
T Consensus 91 p~lr~~YdQMPePK~VIsMGsCa~~GG~f~~sYsvV~g~D~~vPVDvyIPGCPPrPEAl~~gi~~Lq~KI~~~~~ 165 (194)
T COG0377 91 PALRRVYDQMPEPKWVISMGSCANSGGMYWNSYSVVQGVDRVVPVDVYIPGCPPRPEALLYGILLLQEKIRREGR 165 (194)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999971899837997455116887323553134056426765366489888879999999999999985156