HHsearch results for GI: 254780853 and protein with PDBid: 1cc1_S
>1cc1_S Hydrogenase (small subunit); NI-Fe-Se hydrogenase, oxidoreductase; 2.15A {Desulfomicrobium baculatum} SCOP: e.19.1.1
Probab=99.73 E-value=4.5e-18 Score=125.28 Aligned_cols=126 Identities=19% Similarity=0.457 Sum_probs=96.3
Q ss_pred HCCCCEEEEECCCC--CCHHHHHHCCCCCC--H-HHCCEEEC-------------------CCCCCCCEEEEECCCCHHH
Q ss_conf 12883477523546--52135663366678--6-76484870-------------------6822060799714134556
Q gi|254780853|r 51 RTGSLMWMTFGLAC--CAVEMMQASMPRYD--L-ERFGFAPR-------------------ASPRQSDVMIVAGTLTNKM 106 (185)
Q Consensus 51 R~~Slwp~~fg~aC--C~iE~~a~~~p~yD--~-eRfG~~~~-------------------~sPRqADvliVtG~vT~km 106 (185)
.+-++.+++++ +| |.+.+..+..|..| + +.+-+.+. ..+++.||++|.|.|+.+.
T Consensus 6 ~kp~VvWl~~~-~C~GCsiS~Ln~~~p~l~~~ll~~i~l~yhp~lm~~~g~~a~~~l~~~~~~~~~~dIlvVEGsI~~~~ 84 (283)
T 1cc1_S 6 KKAPVIWVQGQ-GCTGCSVSLLNAVHPRIKEILLDVISLEFHPTVMASEGEMALAHMYEIAEKFNGNFFLLVEGAIPTAK 84 (283)
T ss_dssp CCEEEEEEESB-CCSHHHHHHHTCBTTBHHHHHHHTEEEEECTTTCSCCHHHHHHHHHHHHHHTTTSSEEEEESBEECGG
T ss_pred CCCCEEEEECC-CCCCHHHHHHCCCCCCHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
T ss_conf 99988987388-78766999975799888999626276765221202306899999999863568884999984466788
Q ss_pred H-------------------HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEE--CC------CCCCCCCEEECCCC
Q ss_conf 9-------------------999999984686661998535566886347887220--77------22232230674887
Q gi|254780853|r 107 A-------------------SALRRVYDQMPEPRYVISMGSCANGGGYYHYSYSVV--RG------CDRIVPVDIYVPGC 159 (185)
Q Consensus 107 ~-------------------~~l~~~yeqmpePK~ViA~G~Ca~sGG~f~~sY~v~--~g------~d~~iPVDvyVPGC 159 (185)
- +.+..+.+..+..|+|||+|+||+.||+.....+.. .+ .+.++++|++||||
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~e~l~~lr~kak~vVA~GtCA~~GGIpa~~~n~t~~~~~~~~~~~~~~~~~~inipGC 164 (283)
T 1cc1_S 85 EGRYCIVGETLDAKAHHHEVTMMELIRDLAPKSLATVAVGTCSAYGGIPAAEGNVTGSKSVRDFFADEKIEKLLVNVPGC 164 (283)
T ss_dssp GGTTBEEEC---CCSSSCCEEHHHHHHHHGGGSSEEEEESHHHHHCTGGGSTTCCSCEECHHHHHHHHTCCCCEEEECCS
T ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHEECCCCCCCCCEEECCCC
T ss_conf 87135423655544445674599999999730988999853210279654457887650201004667757852467999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q ss_conf 689899999999999999
Q gi|254780853|r 160 PPTAEALIYGILLLQKKI 177 (185)
Q Consensus 160 PPrPeail~gl~~L~~ki 177 (185)
||+||.|+..+..+...+
T Consensus 165 Pp~pd~i~~tl~~~l~~~ 182 (283)
T 1cc1_S 165 PPHPDWMVGTLVAAWSHV 182 (283)
T ss_dssp SCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHEEEHHEEHHCC
T ss_conf 988145120110000100