>1wui_S Periplasmic [NIFE] hydrogenase small subunit; high resolution [NIFE]hydrogenase, oxidoreductase, NI-A state, unready state; HET: NFC; 1.04A {Desulfovibrio vulgaris str} SCOP: e.19.1.1 PDB: 1h2r_S 1ubj_S 1ubh_S 1ubl_S 1ubm_S 1ubo_S 1ubr_S 1ubt_S 1ubu_S 1wuh_S* 1ubk_S* 1wuj_S 1wuk_S 1wul_S 1e3d_A*

Probab=99.80 E-value=1.5e-20 Score=139.76 Aligned_cols=123 Identities=20% Similarity=0.318 Sum_probs=93.3 Q ss_pred CCCEEEEEC-CCCCCHHHHHHCCCCCCHHHCC-EEECCC--------------------CCCCCEEEEECCCCHHHH--- Q ss_conf 883477523-5465213566336667867648-487068--------------------220607997141345569--- Q gi|254780853|r 53 GSLMWMTFG-LACCAVEMMQASMPRYDLERFG-FAPRAS--------------------PRQSDVMIVAGTLTNKMA--- 107 (185) Q Consensus 53 ~Slwp~~fg-~aCC~iE~~a~~~p~yD~eRfG-~~~~~s--------------------PRqADvliVtG~vT~km~--- 107 (185) +-+| ++++ .+.|.+.++.+..|-.|.-.++ +.++.. .++.||++|+|.|+.++. T Consensus 8 ~viW-l~~~~C~GCsiS~L~~~~p~l~~~ll~~i~l~yhp~lm~~~g~~~~~~l~~~~~~~~~~IlvVEGsI~~~~~~~~ 86 (267) T 1wui_S 8 SVVY-LHNAECTGCSESVLRAFEPYIDTLILDTLSLDYHETIMAAAGDAAEAALEQAVNSPHGFIAVVEGGIPTAANGIY 86 (267) T ss_dssp EEEE-EECBCCSHHHHHHHTCTTTTHHHHHHTTCEEEECTTTCSCCHHHHHHHHHHHHTCTTCEEEEEESBEECGGGGTT T ss_pred EEEE-EECCCCCCHHHHHHCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCE T ss_conf 0899-838978865999973699878999758824985351113416889999998752456727984066446878523 Q ss_pred ------HHHHHHHHHCCCCCEEEEECCCCCCCCCCC--CCCCEECCCCCC----CCCEEECCCCCCCHHHHHHHHHHHHH Q ss_conf ------999999984686661998535566886347--887220772223----22306748876898999999999999 Q gi|254780853|r 108 ------SALRRVYDQMPEPRYVISMGSCANGGGYYH--YSYSVVRGCDRI----VPVDIYVPGCPPTAEALIYGILLLQK 175 (185) Q Consensus 108 ------~~l~~~yeqmpePK~ViA~G~Ca~sGG~f~--~sY~v~~g~d~~----iPVDvyVPGCPPrPeail~gl~~L~~ 175 (185) +.+..+.+.++++|+|||+|+||+.||++. .++.-..+++++ +.||++||||||+|+.|+..|..+.. T Consensus 87 ~~~~~~~~~e~~~~~~~~ak~vVA~GtCA~~GGI~a~~~~~t~~~~~~~~l~~~~~~di~IpGCPp~p~~i~~tl~~~l~ 166 (267) T 1wui_S 87 GKVANHTMLDICSRILPKAQAVIAYGTCATFGGVQAAKPNPTGAKGVNDALKHLGVKAINIAGCPPNPYNLVGTIVYYLK 166 (267) T ss_dssp BEETTEEHHHHHHHHGGGSSEEEEESHHHHHCCGGGSTTCTTCEECHHHHHGGGTCCCEEECSSSCCHHHHHHHHHHHHH T ss_pred EEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH T ss_conf 44478049999999832598899940200248864567897775223334555789638847999999999999999983 Q ss_pred H Q ss_conf 9 Q gi|254780853|r 176 K 176 (185) Q Consensus 176 k 176 (185) - T Consensus 167 ~ 167 (267) T 1wui_S 167 N 167 (267) T ss_dssp H T ss_pred C T ss_conf 6

HHsearch results for GI: 254780853 and protein with PDBid: 1wui_S