RPSBLAST alignment of GI: 254780853 and protein with PDBid: 1cc1
>1cc1_S Hydrogenase (small subunit); NI-Fe-Se hydrogenase, oxidoreductase; 2.15A {Desulfovibrio baculatus} SCOP: e.19.1.1 Length = 283
Score = 70.4 bits (172), Expect = 2e-13
Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 27/131 (20%)
Query: 78 DLERFGFAPRASPRQSDVMIVAGTLTNKM-------------------ASALRRVYDQMP 118
+ + ++V G + + + + D P
Sbjct: 56 MALAHMYEIAEKFNGNFFLLVEGAIPTAKEGRYCIVGETLDAKAHHHEVTMMELIRDLAP 115
Query: 119 EPRYVISMGSCANGGGYYHYSYSV--------VRGCDRIVPVDIYVPGCPPTAEALIYGI 170
+ +++G+C+ GG +V ++I + + VPGCPP + ++ +
Sbjct: 116 KSLATVAVGTCSAYGGIPAAEGNVTGSKSVRDFFADEKIEKLLVNVPGCPPHPDWMVGTL 175
Query: 171 LLLQKKIRRVG 181
+ +
Sbjct: 176 VAAWSHVLNPT 186