RPSBLAST alignment of GI: 254780853 and protein with PDBid: 1yqw

>1yqw_A Periplasmic [NIFE] hydrogenase small subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 3cur_A 3cus_A 3h3x_A 1yrq_A 1frf_S Length = 264

 Score = 70.3 bits (172), Expect = 3e-13
 Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 36/155 (23%)

Query: 54  SLMWMTFGLAC--CAVEMMQASMPRYDLERFGFAP---------------------RASP 90
           S++W+     C  C    ++   P  D                                 
Sbjct: 8   SVVWLHNA-ECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEG 66

Query: 91  RQSDVMIVAGTLTNKM---------ASALRRVYDQMPEPRYVISMGSCANGGGYYH--YS 139
           +    ++V G L                +        + + +I +G+C+  GG      +
Sbjct: 67  KDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPN 126

Query: 140 YSVVRGCDRIVPVDIY-VPGCPPTAEALIYGILLL 173
            S  +G    + V    +PGCPP     +  ++ +
Sbjct: 127 PSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHV 161