RPSBLAST alignment of GI: 254780853 and SCOP domain: d1cc1s_

Alignment

 Score = 66.6 bits (162), Expect = 1e-12
 Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 27/131 (20%)

Query: 78  DLERFGFAPRASPRQSDVMIVAGTLTNKM-------------------ASALRRVYDQMP 118
                 +        +  ++V G +                        + +  + D  P
Sbjct: 51  MALAHMYEIAEKFNGNFFLLVEGAIPTAKEGRYCIVGETLDAKAHHHEVTMMELIRDLAP 110

Query: 119 EPRYVISMGSCANGGGYYHYSYSV--------VRGCDRIVPVDIYVPGCPPTAEALIYGI 170
           +    +++G+C+  GG      +V            ++I  + + VPGCPP  + ++  +
Sbjct: 111 KSLATVAVGTCSAYGGIPAAEGNVTGSKSVRDFFADEKIEKLLVNVPGCPPHPDWMVGTL 170

Query: 171 LLLQKKIRRVG 181
           +     +    
Sbjct: 171 VAAWSHVLNPT 181

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: HydA/Nqo6-like
superfamily: HydA/Nqo6-like
family: Nickel-iron hydrogenase, small subunit
domain: Nickel-iron hydrogenase, small subunit
species: Desulfomicrobium baculatum [TaxId: 899]