RPSBLAST alignment of GI: 254780853 and SCOP domain: d1yq9a1

Alignment

 Score = 73.1 bits (179), Expect = 1e-14
 Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 37/156 (23%)

Query: 54  SLMWMTFGLAC--CAVEMMQASMPRYDLERFGF-------------------APRASPRQ 92
           S++++     C  C+  +++   P  D                         A   + + 
Sbjct: 5   SVVYLHNA-ECTGCSESVLRTVDPYVDELILDVISMDYHETLMAGAGHAVEEALHEAIKG 63

Query: 93  SDVMIVAGTLTNKMA---------SALRRVYDQMPEPRYVISMGSCANGGGYY--HYSYS 141
             V ++ G +              +      +  P+ + VI++G+CA  GG      + +
Sbjct: 64  DFVCVIEGGIPMGDGGYWGKVGGRNMYDICAEVAPKAKAVIAIGTCATYGGVQAAKPNPT 123

Query: 142 VVRGCDRIVP----VDIYVPGCPPTAEALIYGILLL 173
              G +  +       I + GCPP     +  ++ L
Sbjct: 124 GTVGVNEALGKLGVKAINIAGCPPNPMNFVGTVVHL 159

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: HydA/Nqo6-like
superfamily: HydA/Nqo6-like
family: Nickel-iron hydrogenase, small subunit
domain: Nickel-iron hydrogenase, small subunit
species: Desulfovibrio gigas [TaxId: 879]