HHsearch alignment for GI: 254780854 and conserved domain: PRK07735

>PRK07735 NADH dehydrogenase subunit C; Validated.
Probab=100.00  E-value=2.8e-41  Score=272.40  Aligned_cols=141  Identities=30%  Similarity=0.516  Sum_probs=127.2

Q ss_pred             HHHHHHHHHHHCCCCEEE-EE---EECCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEE
Q ss_conf             999999999861531145-79---84795999986898999999987187898014751325688777785799999661
Q gi|254780854|r    5 IEDLGDYIVNSFSGSVRF-AV---NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS   80 (202)
Q Consensus         5 L~~L~~~L~~~l~~~I~~-~~---~~~~el~i~V~~~~l~~vl~~LKdd~~~~F~~LiDItaVDyp~~~~RFeVvY~LlS   80 (202)
T Consensus       268 L~~yv~vi~e~~g~~vl~d~YIN~LskdvPtlvv~~e~yy~v~E~lr~hE~l~fdYlSeLh~tDf~---thmEvyvHl~S  344 (420)
T PRK07735        268 LNQYVEVIKEKLGEDALVDAYINKLSKDVPTLVVEPEKYYEVMELLRFHEGLAFDYMSELHATDFV---THMEVYVHLFS  344 (420)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH---HHEEEEEEEEE
T ss_conf             999999999870147899999988606688157545879999999875031024788763030024---11056787775


Q ss_pred             CCCCCEEEEEEEECC-CCEEECCCCCEECCCCEECCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             575205998212057-85010122330255310112101138273567987677889989878711337
Q gi|254780854|r   81 PKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF  148 (202)
Q Consensus        81 ~~~n~ri~Vk~~v~e-~~~vpSi~~i~p~A~W~ERE~~DmfGI~F~gHPdlRRiL~d~~feGhPLRKDF  148 (202)
T Consensus       345 y~~rq~vavKVK~dRe~p~v~Sv~plW~gAnWpErEayDLLGi~F~GHpnL~RI~mpddWvGhPLRKDY  413 (420)
T PRK07735        345 YGKKQSVAVKVKLDREAPQVESVTPLWKGADWPEREAYDLLGIVFKGHPNLSRILMPDDWVGHPLRKDY  413 (420)
T ss_pred             CCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf             278861689863145676543100135789983455665402112699880001166444578433557