HHsearch alignment for GI: 254780854 and conserved domain: PRK07785
>PRK07785 NADH dehydrogenase subunit C; Provisional.
Probab=100.00 E-value=0 Score=417.21 Aligned_cols=156 Identities=35% Similarity=0.695 Sum_probs=144.8
Q ss_pred HHHHHHHHH---HCCCCEEEEEEECCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC-CCEEEEEEEEEC
Q ss_conf 999999998---6153114579847959999868989999999871878980147513256887777-857999996615
Q gi|254780854|r 6 EDLGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSP 81 (202)
Q Consensus 6 ~~L~~~L~~---~l~~~I~~~~~~~~el~i~V~~~~l~~vl~~LKdd~~~~F~~LiDItaVDyp~~~-~RFeVvY~LlS~ 81 (202)
T Consensus 67 d~L~~a~~~~~~~~~~aie~vvVdrgELTl~V~re~l~~V~~~LRDdp~lrFe~l~dvtGVDYP~~~~rrf~vVYhLlS~ 146 (238)
T PRK07785 67 DRLAEALEEEGVEFGDAIEKVVVDRGELTLHVRRERLPEVAQTLRDDPALRFELCLGVSGVHYPDDTGRELHAVYPLTSI 146 (238)
T ss_pred HHHHHHHHHCCCCHHHHEEEEEEECCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 99999987705565442137888688389998789999999987079655562021544545687567643699982378
Q ss_pred CCCCEEEEEEEECCCCE-EECCCCCEECCCCEECCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH
Q ss_conf 75205998212057850-10122330255310112101138273567987677889989878711337789844788762
Q gi|254780854|r 82 KYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDD 160 (202)
Q Consensus 82 ~~n~ri~Vk~~v~e~~~-vpSi~~i~p~A~W~ERE~~DmfGI~F~gHPdlRRiL~d~~feGhPLRKDFPltG~~evryd~ 160 (202)
T Consensus 147 ~~N~RiRlkv~v~e~dP~vpSv~~v~~~AnW~ERE~~DmfGI~F~GHPdLrRIlmp~d~~GHPlRKD~PL~G-ipVeYkg 225 (238)
T PRK07785 147 THNRRIRLEVAAPDSDPHIPSLVSVYPTNDWHERETYDFFGIIFDGHPALTRIEMPDDWQGHPQRKDYPLGG-IPVEYKG 225 (238)
T ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECC
T ss_conf 779889999975888985885323356887467645400052247999861036899998775356767887-2574168
Q ss_pred HH
Q ss_conf 11
Q gi|254780854|r 161 KV 162 (202)
Q Consensus 161 ~~ 162 (202)
T Consensus 226 a~ 227 (238)
T PRK07785 226 AQ 227 (238)
T ss_pred CC
T ss_conf 86