HHsearch alignment for GI: 254780854 and conserved domain: PRK12494

Probab=100.00  E-value=1.8e-42  Score=279.67  Aligned_cols=124  Identities=37%  Similarity=0.592  Sum_probs=115.0

Q ss_pred             EEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCC----CEEEEEEEECC-CCEEECCCC
Q ss_conf             9999868989999999871878980147513256887777857999996615752----05998212057-850101223
Q gi|254780854|r   30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYN----RRLRVKIAVAE-GKSVPSIVG  104 (202)
Q Consensus        30 l~i~V~~~~l~~vl~~LKdd~~~~F~~LiDItaVDyp~~~~RFeVvY~LlS~~~n----~ri~Vk~~v~e-~~~vpSi~~  104 (202)
T Consensus        41 E~i~V~p~~l~~va~aL~~~---GFnyL~~q~~yD~~P-g~~LvsvYHl~~~~d~~d~p~evrlKV~vprd~P~iPSi~~  116 (172)
T PRK12494         41 EIIKVEPDFLLPIATALYAY---GFNYLQCQGGYDEGP-GKNLVSFYHLIKVSDNADKPREVRLKVFLPRDDPRVPSVYW  116 (172)
T ss_pred             EEEEECHHHHHHHHHHHHHC---CCCHHHHEEEEECCC-CCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHH
T ss_conf             77314789999999999982---850000110263279-97489998577842676787689999977888998997366


Q ss_pred             CEECCCCEECCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             30255310112101138273567987677889989878711337789844788
Q gi|254780854|r  105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH  157 (202)
Q Consensus       105 i~p~A~W~ERE~~DmfGI~F~gHPdlRRiL~d~~feGhPLRKDFPltG~~evr  157 (202)
T Consensus       117 iw~~AdW~ERE~yDmfGI~F~GHPdlrRilmpedw~G~PLRKDyi~pdfyelq  169 (172)
T PRK12494        117 IWKGADWQERETYDMYGINFEGHPNLKRILMPEDWVGWPLRKDYIQPDFYELQ  169 (172)
T ss_pred             HCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             15588501543421047364799986035699999888866772699840410