BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780854|ref|YP_003065267.1| NADH dehydrogenase subunit C
[Candidatus Liberibacter asiaticus str. psy62]
(202 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|154248550|ref|YP_001419508.1| NADH (or F420H2) dehydrogenase, subunit C [Xanthobacter
autotrophicus Py2]
gi|218534340|sp|A7IPA5|NUOC_XANP2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|154162635|gb|ABS69851.1| NADH (or F420H2) dehydrogenase, subunit C [Xanthobacter
autotrophicus Py2]
Length = 209
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 108/198 (54%), Positives = 143/198 (72%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + DL ++ + SG+V ++ + GEL+L +D +V + +FLRDDP C F I+D+
Sbjct: 1 MDETLNDLAAHVSAALSGAVLGSLVAHGELTLQIDPAQIVKVATFLRDDPACLFHCIVDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ +R RFDVVYH LS K N R+R+K+ E VPSI ++PGA+WFERE +DMY
Sbjct: 61 CGVDYPAREKRFDVVYHLLSLKQNVRIRLKVETDEDTPVPSICSVFPGANWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHP+LRR+LTDYGF+GHPLRKDFP TGFVE+ YDD+ K+VVY PV L QE R++D
Sbjct: 121 GILFTGHPELRRLLTDYGFDGHPLRKDFPTTGFVEVRYDDEQKRVVYEPVRLPQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEGV + ++
Sbjct: 181 FLSPWEGVEYVLPGDEKA 198
>gi|158423293|ref|YP_001524585.1| NADH-ubiquinone dehydrogenase chain C 1 [Azorhizobium caulinodans
ORS 571]
gi|218534279|sp|A8I3Y9|NUOC_AZOC5 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|158330182|dbj|BAF87667.1| NADH-ubiquinone dehydrogenase chain C 1 [Azorhizobium caulinodans
ORS 571]
Length = 211
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 105/198 (53%), Positives = 143/198 (72%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++DL ++ + G+V + GEL+L+ ++ L +FLRDDP C F I+D+
Sbjct: 1 MDETLKDLAAHVTGALPGAVVAHKIAYGELTLETTPDHILKLATFLRDDPSCLFTCIVDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CG D+ +R RF+VVYH LS K N R+RVK++ E VPS+ GI+PGA+WFERE +D+Y
Sbjct: 61 CGADYPAREQRFEVVYHLLSLKQNARVRVKLSAGEETLVPSVTGIWPGANWFEREAYDLY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHP+LRR+LTDYGF+GHPLRKDFP+TGFVE+ YDD++K+VVY PV L QE R++D
Sbjct: 121 GILFTGHPELRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDELKRVVYEPVRLAQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEGV + ++
Sbjct: 181 FLSPWEGVEYILPGDEKA 198
>gi|307942119|ref|ZP_07657470.1| NADH-quinone oxidoreductase chain 5 [Roseibium sp. TrichSKD4]
gi|307774405|gb|EFO33615.1| NADH-quinone oxidoreductase chain 5 [Roseibium sp. TrichSKD4]
Length = 201
Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 108/198 (54%), Positives = 141/198 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L ++I SV GEL++ V D++ + +LRD+ C FVN+ D+
Sbjct: 1 MDEALKELAEHISLGLGDSVLSTKVDYGELTISVAASDILDVVRYLRDNSACKFVNLTDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ +R RFDVVYHFLSP N+R+RVK+ E VPSI I+PGA+WFERE +DMY
Sbjct: 61 CGVDWPAREKRFDVVYHFLSPFQNQRIRVKVMTDEDTPVPSITPIFPGAEWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF+GHPLRKDFP+TGFVE+ YDD+ K+VVY PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFDGHPLRKDFPLTGFVEVRYDDEKKRVVYEPVRLNQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLTGDEKA 198
>gi|260434180|ref|ZP_05788151.1| NADH-quinone oxidoreductase subunit c [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418008|gb|EEX11267.1| NADH-quinone oxidoreductase subunit c [Silicibacter
lacuscaerulensis ITI-1157]
Length = 201
Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats.
Identities = 100/199 (50%), Positives = 139/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG +I V + GEL+++V +LV FL+ D +C F ++D+
Sbjct: 1 MSEALKELGAHIELKRPDCVLSWAVAHGELTVEVSPSNLVEFVEFLKTDQNCKFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N+R+R++I+V E VPSIV ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPERAKRFDVVYHFLSMYQNQRIRIRISVREEDMVPSIVDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG N + ++ K+
Sbjct: 181 FMSPWEGANYILPGDEKKE 199
>gi|89067784|ref|ZP_01155238.1| NADH dehydrogenase subunit C [Oceanicola granulosus HTCC2516]
gi|89046754|gb|EAR52809.1| NADH dehydrogenase subunit C [Oceanicola granulosus HTCC2516]
Length = 209
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 99/201 (49%), Positives = 132/201 (65%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG +I V GEL++ V +L F++ D C F ++D+
Sbjct: 7 MTDALNELGGHIEARRPDCVAAWQVDHGELTVTVALANLPGFVEFIKTDATCRFSTLVDI 66
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD R+ RFDVVYHFLS N+R+R++ V E VPSI GI+P A+WFERE++DM+
Sbjct: 67 TAVDHPGRAKRFDVVYHFLSMYQNQRIRLRTLVREEDLVPSITGIHPSANWFEREIFDMF 126
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 127 GILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEVQKRVVYEPVKLVQEYRQFD 186
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
FLSPWEG N + +D D+
Sbjct: 187 FLSPWEGANYILPGDDKADEA 207
>gi|126736071|ref|ZP_01751815.1| NADH dehydrogenase subunit C [Roseobacter sp. CCS2]
gi|126714628|gb|EBA11495.1| NADH dehydrogenase subunit C [Roseobacter sp. CCS2]
Length = 203
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 96/202 (47%), Positives = 138/202 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG ++ + V + EL++ V LVS FL++D C F +++D+
Sbjct: 1 MTEALQELGTHLELKRTDCVLSWDVAHDELTVTVAPSSLVSFVEFLKNDATCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ SR+ RFDVVYHFLS N R+R+++ + E +PSI+ ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPSRAKRFDVVYHFLSMYQNHRIRLRVQIREEDMLPSIMSVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEVQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDMS 202
F+SPWEG + ++ D+ +
Sbjct: 181 FMSPWEGAEYILPGDEKTDEKA 202
>gi|159043858|ref|YP_001532652.1| NADH dehydrogenase subunit C [Dinoroseobacter shibae DFL 12]
gi|218534283|sp|A8LIT7|NUOC_DINSH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|157911618|gb|ABV93051.1| NADH (or F420H2) dehydrogenase, subunit C [Dinoroseobacter shibae
DFL 12]
Length = 215
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 96/202 (47%), Positives = 133/202 (65%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L +I V + EL++ +V L +FL+ D C F +ID+
Sbjct: 10 MTAALQELAAHIEMKRPDCVISTEIAHDELTVVATPNSIVGLVAFLKTDATCKFSTLIDI 69
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N R+R+++ V E VPSI+ +P A+WFEREV+DM+
Sbjct: 70 TAVDYPERAQRFDVVYHFLSMYQNHRIRIRVPVREDDIVPSIISEHPSANWFEREVFDMF 129
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD++ K+VVY PV L+QE+R +D
Sbjct: 130 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEEKKRVVYEPVNLVQEYRQFD 189
Query: 181 FLSPWEGVNSLFAKEDSKDDMS 202
F+SPWEG + ++ DD +
Sbjct: 190 FMSPWEGAEYILPGDEKTDDKA 211
>gi|163759541|ref|ZP_02166626.1| NADH-ubiquinone oxidoreductase chain C protein [Hoeflea
phototrophica DFL-43]
gi|162283138|gb|EDQ33424.1| NADH-ubiquinone oxidoreductase chain C protein [Hoeflea
phototrophica DFL-43]
Length = 200
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 115/199 (57%), Positives = 144/199 (72%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++DL DY+ + + + GEL+L +L+ L +FLRDD C FVN ID
Sbjct: 1 MSDALKDLSDYLGEIRGNLIESSEIAYGELTLIAQPANLIELMTFLRDDAQCQFVNFIDC 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R+ RFDVVYH LSP+ N R+RVK+A AE VPS+ +YPGADWFERE +D+Y
Sbjct: 61 CGVDWPGRAERFDVVYHLLSPRQNIRIRVKVATAEDAPVPSLTAVYPGADWFEREAYDLY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ YDD+VK+VVY PVEL QE R++D
Sbjct: 121 GILFTGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYDDEVKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKAK 199
>gi|259418836|ref|ZP_05742753.1| NADH-quinone oxidoreductase subunit c [Silicibacter sp. TrichCH4B]
gi|259345058|gb|EEW56912.1| NADH-quinone oxidoreductase subunit c [Silicibacter sp. TrichCH4B]
Length = 201
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 136/198 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++DLG I V + GEL++DV ++ L FLR D C F ++D+
Sbjct: 1 MIEALQDLGHQIEAKRPDCVLSWDIAHGELNIDVKPANIAGLVEFLRVDSACRFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYH LS N R+R+++AV E VPSIV ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPERTKRFDVVYHLLSMYQNHRIRLRVAVREEDMVPSIVDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 121 GILFTGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAQKRVVYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + + ++ +
Sbjct: 181 FMSPWEGADYILPGDEKE 198
>gi|150396113|ref|YP_001326580.1| NADH dehydrogenase subunit C [Sinorhizobium medicae WSM419]
gi|218534338|sp|A6U7W5|NUOC_SINMW RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|150027628|gb|ABR59745.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium medicae
WSM419]
Length = 201
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 112/199 (56%), Positives = 142/199 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L YI + V + GEL+L L++L +FLRDD C FV+ ID+
Sbjct: 1 MSEALNELASYIREARGALVAGSEVRYGELTLTTKAESLIALLTFLRDDVQCGFVSFIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R +RFDVVYH LSP+ N+R+RVK+A E + VPSI +YPGADWFERE +DMY
Sbjct: 61 CGVDYPQRPDRFDVVYHLLSPRQNQRIRVKVATGENEPVPSITSVYPGADWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEG+PLRKDFP+TGFVE+ YD++ K+VVY PVEL QE R++D
Sbjct: 121 GILFTGHPDLRRILTDYGFEGYPLRKDFPLTGFVEVRYDNEAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + ++
Sbjct: 181 FLSPWEGTEYVLPGDEKAK 199
>gi|254466123|ref|ZP_05079534.1| NADH-quinone oxidoreductase chain c [Rhodobacterales bacterium Y4I]
gi|206687031|gb|EDZ47513.1| NADH-quinone oxidoreductase chain c [Rhodobacterales bacterium Y4I]
Length = 201
Score = 264 bits (674), Expect = 6e-69, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 137/198 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG I V S EL++DV ++ L FL+ DP+C F ++D+
Sbjct: 1 MTDALKELGAQIEAKRPDCVVAWSVSFDELTIDVTPSNIAGLVEFLKSDPNCKFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N+R+R++ AV E + VPSIV ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPDRAKRFDVVYHFLSMYRNQRIRLRAAVREDEMVPSIVKVHPSANWFEREVYDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEVQKRVVYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKE 198
>gi|86137599|ref|ZP_01056176.1| NADH dehydrogenase subunit C [Roseobacter sp. MED193]
gi|85825934|gb|EAQ46132.1| NADH dehydrogenase subunit C [Roseobacter sp. MED193]
Length = 197
Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 96/197 (48%), Positives = 133/197 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG I V + GEL++DV ++ L FL+ D C F +++D+
Sbjct: 1 MTEALQELGTQIAAKRPDCVLSWDVAHGELNVDVAPANIAGLVEFLKSDSSCKFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R RFDVVYH LS N+R+R++++V E VPSIV ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPERGKRFDVVYHLLSMYQNQRIRLRVSVREDDMVPSIVDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAEKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDS 197
F+SPWEG + ++
Sbjct: 181 FMSPWEGAEYILPGDEK 197
>gi|222085577|ref|YP_002544107.1| NADH-ubiquinone oxidoreductase chain C protein [Agrobacterium
radiobacter K84]
gi|254767808|sp|B9JD44|NUOC_AGRRK RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|221723025|gb|ACM26181.1| NADH-ubiquinone oxidoreductase chain C protein [Agrobacterium
radiobacter K84]
Length = 200
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 112/199 (56%), Positives = 141/199 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + GEL++ ++++L +FLRDD C FVN+ D+
Sbjct: 1 MSEALNELATYLTEVRGALISSSEIKYGELNVTTTAENVIALLTFLRDDAKCGFVNMTDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R +RFDVVYH LSPK N R+R+K+ VAE + VPS GIYPGADWFERE WDMY
Sbjct: 61 CGVDWPQRPDRFDVVYHLLSPKKNLRIRIKVPVAEDQPVPSACGIYPGADWFERETWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRILTDYGFEGHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++D
Sbjct: 121 GVLFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKAK 199
>gi|328543687|ref|YP_004303796.1| NADH-ubiquinone oxidoreductase chain c protein [polymorphum gilvum
SL003B-26A1]
gi|326413431|gb|ADZ70494.1| NADH-ubiquinone oxidoreductase chain c protein [Polymorphum gilvum
SL003B-26A1]
Length = 201
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 109/198 (55%), Positives = 142/198 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG++I + S+ + GEL+L V ++ + FLRDD C FVN+ D+
Sbjct: 1 MDETLRELGEHIELALKDSLLSWKVAYGELTLTVSAPAILDVVRFLRDDASCKFVNLTDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ +R RFDVVYHFLSP N+R+RVK++ E VPS+ ++PGA+WFERE +DMY
Sbjct: 61 CGVDYPARDRRFDVVYHFLSPVQNQRIRVKLSTDEDTPVPSLTPLFPGAEWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF+GHPLRKDFPVTGFVE+ YDD K+VVY PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFDGHPLRKDFPVTGFVEVRYDDDKKRVVYEPVRLTQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKA 198
>gi|220924007|ref|YP_002499309.1| NADH (or F420H2) dehydrogenase subunit C [Methylobacterium nodulans
ORS 2060]
gi|219948614|gb|ACL59006.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium
nodulans ORS 2060]
Length = 215
Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 137/198 (69%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ L D + + +V V + EL+L V+ ++V + + LRDDP C F ID+C
Sbjct: 17 IEALQALSDRLAEALGSAVTDRVIAFDELTLTVEAQEIVRVLTHLRDDPLCAFRCFIDIC 76
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G D+ R+ RFDVVYH LS ++N R+RVK+ E VPS++ +YP A+W+ERE +D+YG
Sbjct: 77 GADYPGRARRFDVVYHLLSLRHNLRIRVKVQTDEATPVPSVIAVYPAANWYERETYDLYG 136
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R++DF
Sbjct: 137 ILFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEGRVVYEPVKLTQEFRNFDF 196
Query: 182 LSPWEGVNSLFAKEDSKD 199
LSPWEG + + ++
Sbjct: 197 LSPWEGTDYVLPGDEKAK 214
>gi|83951740|ref|ZP_00960472.1| NADH dehydrogenase subunit C [Roseovarius nubinhibens ISM]
gi|83836746|gb|EAP76043.1| NADH dehydrogenase subunit C [Roseovarius nubinhibens ISM]
Length = 202
Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats.
Identities = 100/201 (49%), Positives = 137/201 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG YI S V GEL++DV ++ L FLR+D C F ++D+
Sbjct: 1 MSEALKELGAYIEAKRSDCVLSWEVVHGELTVDVALANITGLVEFLRNDQTCRFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ +R RFDVVYHFLS N R+R++ AV E VPSI ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPARPKRFDVVYHFLSMYQNHRIRLRAAVREEDMVPSITDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ +K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEALKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
F+SPWEG + ++ +++
Sbjct: 181 FMSPWEGAEYILPGDEKQEEA 201
>gi|99080584|ref|YP_612738.1| NADH dehydrogenase subunit C [Ruegeria sp. TM1040]
gi|122398270|sp|Q1GIP0|NUOC_SILST RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|99036864|gb|ABF63476.1| NADH (or F420H2) dehydrogenase subunit C [Ruegeria sp. TM1040]
Length = 201
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 135/198 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++DLG I V + GEL++DV ++ L FLR D C F ++D+
Sbjct: 1 MIEALQDLGHQIEAKRPECVLSWDIAHGELNIDVKPANIAGLVEFLRVDSACRFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYH LS N+R+R++ AV E VPSIV ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPERTKRFDVVYHLLSMYQNQRIRLRAAVREEDMVPSIVDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 121 GILFTGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAQKRVVYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKE 198
>gi|260462232|ref|ZP_05810476.1| NADH (or F420H2) dehydrogenase, subunit C [Mesorhizobium
opportunistum WSM2075]
gi|259032092|gb|EEW33359.1| NADH (or F420H2) dehydrogenase, subunit C [Mesorhizobium
opportunistum WSM2075]
Length = 200
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 110/199 (55%), Positives = 145/199 (72%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ G AV + GEL++ V+ +LV + +FLRDD C F++IID+
Sbjct: 1 MAASLSELSTYLGEKLPGRFSDAVLAYGELTVHVEPQNLVEVVTFLRDDARCQFISIIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CG D+ SR+ RFDVVYH LSP+ N R+RVK+ E VPSI G++PGADWFERE +D+Y
Sbjct: 61 CGADYPSRAKRFDVVYHLLSPRQNVRIRVKVQADEETMVPSITGVFPGADWFERETYDLY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YDD+ K+V+Y PVEL QE R++D
Sbjct: 121 GVLFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDDEAKRVIYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKAK 199
>gi|84516741|ref|ZP_01004099.1| NADH dehydrogenase subunit C [Loktanella vestfoldensis SKA53]
gi|84509209|gb|EAQ05668.1| NADH dehydrogenase subunit C [Loktanella vestfoldensis SKA53]
Length = 203
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 96/199 (48%), Positives = 138/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG ++ V+ + GEL++ V LVS FL+ D +C F +++D+
Sbjct: 1 MTEALQELGAHLDLKRIDCVQSWDVTHGELTVTVAPSSLVSFVEFLKTDANCLFTSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ SR+ RFD++YHFLS N+R+RV++ + + +PSI+G++P A+WFEREV+DM+
Sbjct: 61 TAVDYPSRAKRFDMIYHFLSMYQNQRIRVRVQIRDDDMMPSIIGVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEVQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + +D
Sbjct: 181 FMSPWEGAKYVLPGDDKAK 199
>gi|254469529|ref|ZP_05082934.1| NADH-ubiquinone oxidoreductase chain c protein [Pseudovibrio sp.
JE062]
gi|211961364|gb|EEA96559.1| NADH-ubiquinone oxidoreductase chain c protein [Pseudovibrio sp.
JE062]
Length = 200
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 100/200 (50%), Positives = 140/200 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG++I + V + G+L+L+V ++++ FLRDD C F+ ++D+
Sbjct: 1 MDETLSELGEFIELTLGDKVESWSVAYGDLTLNVSHDQIINVLRFLRDDARCGFIALVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ +R RFDVVYH LSP N R+RVK+ E VPS++ I+ GA+WFERE +DMY
Sbjct: 61 CGVDWPAREKRFDVVYHLLSPVQNLRIRVKVQTDETTPVPSVISIFKGAEWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F G+PDLRR+LTDYGF+G PLRKDFP+TG+VE+ YDD K+VVY PV+L QE R +D
Sbjct: 121 GILFTGNPDLRRLLTDYGFDGFPLRKDFPLTGYVEVRYDDTKKRVVYEPVQLTQEFRSFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
FLSPWEG + + ++ +
Sbjct: 181 FLSPWEGTDYVLPGDEKASN 200
>gi|294677056|ref|YP_003577671.1| NADH-quinone oxidoreductase subunit C [Rhodobacter capsulatus SB
1003]
gi|6647659|sp|O84971|NUOC_RHOCA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|3282561|gb|AAC24987.1| NUOC [Rhodobacter capsulatus]
gi|294475876|gb|ADE85264.1| NADH-quinone oxidoreductase, C subunit [Rhodobacter capsulatus SB
1003]
Length = 199
Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 101/198 (51%), Positives = 134/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K++DL ++ G V A GEL++ V + FLRDD C F ++DL
Sbjct: 1 MSEKLQDLAAHVAQQRPGDVISAEVVQGELTVTVKPEGIADFVRFLRDDAGCRFTTLVDL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R RF++V+HFLS N+R+RVK +AE PSIV +YP A+W+EREV+DM+
Sbjct: 61 TAVDWPERVERFEMVWHFLSMWKNQRIRVKAGLAEDAMCPSIVEVYPAANWYEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF GHPLRKDFP TG++EL YD+ K+VVY PV+L QE+R +D
Sbjct: 121 GILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYIELRYDEVQKRVVYEPVKLAQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG S+ ++ +
Sbjct: 181 FLSPWEGAQSVLPGDEKR 198
>gi|15965019|ref|NP_385372.1| NADH dehydrogenase subunit C [Sinorhizobium meliloti 1021]
gi|307301091|ref|ZP_07580860.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
BL225C]
gi|7387951|sp|O68854|NUOC1_RHIME RecName: Full=NADH-quinone oxidoreductase subunit C 1; AltName:
Full=NADH dehydrogenase I subunit C 1; AltName:
Full=NDH-1 subunit C 1
gi|15074198|emb|CAC45845.1| NADH dehydrogenase I chain C [Sinorhizobium meliloti 1021]
gi|306904046|gb|EFN34632.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
BL225C]
Length = 201
Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 108/198 (54%), Positives = 141/198 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + A GEL++ +L++L +FLRDD C FV+ ID+
Sbjct: 1 MSEALNELASYLREARGALIADAEVKYGELTVTAKAENLIALLTFLRDDVQCGFVSFIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R +RFDVVYH LSP+ N+R+RVK+A E VPS ++PGADWFERE +DMY
Sbjct: 61 CGVDYPQRPDRFDVVYHLLSPRQNQRVRVKVATGENDPVPSATSVFPGADWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEG+PLRKDFP+TGFVE+ YD++ K+VVY PVEL QE R++D
Sbjct: 121 GILFTGHPDLRRILTDYGFEGYPLRKDFPLTGFVEVRYDNEAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + ++
Sbjct: 181 FLSPWEGTEYVLPGDEKA 198
>gi|254511854|ref|ZP_05123921.1| NADH-quinone oxidoreductase, c subunit [Rhodobacteraceae bacterium
KLH11]
gi|221535565|gb|EEE38553.1| NADH-quinone oxidoreductase, c subunit [Rhodobacteraceae bacterium
KLH11]
Length = 200
Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/199 (49%), Positives = 140/199 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG + S V + GEL++DV +LV FL+ D C F +++D+
Sbjct: 1 MSEALKELGAQLELKRSDCVLSWDVTHGELNVDVAPSNLVEFVEFLKSDRSCQFSSLVDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R+ RFDVVYHFLS N+R+R+++++ E VPSIV ++P A+WFEREV+DM+
Sbjct: 61 TGVDYPERAKRFDVVYHFLSMYQNQRIRLRVSIREDDMVPSIVDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG N + ++ ++
Sbjct: 181 FMSPWEGANYILPGDEKQE 199
>gi|163732065|ref|ZP_02139511.1| NADH dehydrogenase subunit C [Roseobacter litoralis Och 149]
gi|161394363|gb|EDQ18686.1| NADH dehydrogenase subunit C [Roseobacter litoralis Och 149]
Length = 201
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 93/199 (46%), Positives = 140/199 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG+YI + V + GEL++DV ++V L FL+ D C F +++D+
Sbjct: 1 MSEPLQELGNYIATKRTDCVLAWDVTHGELNVDVTPSNIVGLVEFLKTDATCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ R+DVVYH LS N R+R+++++ + + +PS++ ++P A+WFEREV+DM+
Sbjct: 61 TAVDYTGRAKRYDVVYHLLSMYQNHRVRLRVSIRDDQMMPSVISVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEAQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++ ++
Sbjct: 181 FMSPWEGAEYILPGDEKQE 199
>gi|307317825|ref|ZP_07597263.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
AK83]
gi|5650736|emb|CAB51622.1| nuoC1 [Sinorhizobium meliloti]
gi|306896587|gb|EFN27335.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
AK83]
Length = 201
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 108/198 (54%), Positives = 142/198 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + A GEL++ +L++L +FLRDD C FV+ ID+
Sbjct: 1 MSEALNELASYLREARGALIADAEVKYGELTVTAKAENLIALLTFLRDDVQCGFVSFIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R +RFDVVYH LSP+ N+R+RVK+A E + VPS ++PGADWFERE +DMY
Sbjct: 61 CGVDYPQRPDRFDVVYHLLSPRQNQRVRVKVATGENEPVPSATSVFPGADWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEG+PLRKDFP+TGFVE+ YD++ K+VVY PVEL QE R++D
Sbjct: 121 GILFTGHPDLRRILTDYGFEGYPLRKDFPLTGFVEVRYDNEAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + ++
Sbjct: 181 FLSPWEGTEYVLPGDEKA 198
>gi|319782983|ref|YP_004142459.1| NADH (or F420H2) dehydrogenase subunit C [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168871|gb|ADV12409.1| NADH (or F420H2) dehydrogenase, subunit C [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 200
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 113/199 (56%), Positives = 145/199 (72%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ G V A + GEL++ V+ DLV + +FLRDD C F++IID+
Sbjct: 1 MTASLSELSTYLGEKLIGRVNEADIAYGELTIHVEPRDLVEVMTFLRDDARCQFISIIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CG D+ SR+ RFDVVYH LSPK N R+RVK+ E VPSI G+YPGADWFERE +D+Y
Sbjct: 61 CGADYPSRAKRFDVVYHLLSPKQNVRVRVKVQADEETMVPSITGVYPGADWFERETYDLY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YDD+ K+V+Y PVEL QE R++D
Sbjct: 121 GVLFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDDEAKRVIYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKAK 199
>gi|209548864|ref|YP_002280781.1| NADH dehydrogenase subunit C [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226737322|sp|B5ZYL4|NUOC_RHILW RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|209534620|gb|ACI54555.1| NADH (or F420H2) dehydrogenase, subunit C [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 200
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 111/199 (55%), Positives = 139/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + + GEL+L +L++L +FLRDD C FVN+ID+
Sbjct: 1 MSEALTELASYLGEARGNLIAASQMKYGELTLTTTGENLIALLTFLRDDAKCGFVNLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSPK N R+RVK+A E VPS ++PGADWFERE WDMY
Sbjct: 61 CGVDWPQRELRFDVVYHLLSPKQNVRIRVKVATDEDTPVPSACAVHPGADWFERETWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRILTDYGFEGHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++D
Sbjct: 121 GVLFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + + ++
Sbjct: 181 FMSPWEGTDYVLPGDEKAK 199
>gi|254461949|ref|ZP_05075365.1| NADH-quinone oxidoreductase, c subunit [Rhodobacterales bacterium
HTCC2083]
gi|206678538|gb|EDZ43025.1| NADH-quinone oxidoreductase, c subunit [Rhodobacteraceae bacterium
HTCC2083]
Length = 202
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 96/201 (47%), Positives = 136/201 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG +I V GEL++ V ++V L FL+ DP+C F +++D+
Sbjct: 1 MSAALIELGTHIEAKRPDCVLAWAIEQGELNVTVAPSNIVGLVDFLKTDPNCKFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R RFDVVYHFLS N R+R+++ V E VPSIV ++P A+WFERE++DM+
Sbjct: 61 TAVDYPERGKRFDVVYHFLSMYLNHRIRLRLQVREDDMVPSIVEVHPSANWFEREIYDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GLLFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEVEKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
F+SPWEG + ++ +++
Sbjct: 181 FMSPWEGAKYVLPGDEKQEEA 201
>gi|153009750|ref|YP_001370965.1| NADH dehydrogenase subunit C [Ochrobactrum anthropi ATCC 49188]
gi|218534315|sp|A6X1N2|NUOC_OCHA4 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|151561638|gb|ABS15136.1| NADH (or F420H2) dehydrogenase, subunit C [Ochrobactrum anthropi
ATCC 49188]
Length = 202
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 104/200 (52%), Positives = 141/200 (70%), Gaps = 1/200 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + +L YI ++ A + GEL+L V ++S+ +FLRDD C FVN+ D
Sbjct: 1 MSEEALGELSGYIKERLGDAIEEAKLAYGELTLSVPAASIISVLTFLRDDVQCQFVNLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ R+ RFDVVY +SP+ N+R+RVK+ E VPS V ++ GA+WFERE +DM
Sbjct: 61 ISGVDYPQRAKRFDVVYQLMSPRQNQRIRVKVQADEDTLVPSAVPVFVGAEWFERETYDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ Y+D++K+VVY PV+L QE R++
Sbjct: 121 YGVLFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRNF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + + ++
Sbjct: 181 DFLSPWEGTDYVLPGDEKAK 200
>gi|254475901|ref|ZP_05089287.1| NADH-quinone oxidoreductase, c subunit [Ruegeria sp. R11]
gi|214030144|gb|EEB70979.1| NADH-quinone oxidoreductase, c subunit [Ruegeria sp. R11]
Length = 201
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 95/198 (47%), Positives = 137/198 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG I V + EL++DV ++ FL++DP C F +++D+
Sbjct: 1 MTEALKELGAQIEAKRPDCVIGWDVTFDELNVDVAPANIAGFVEFLKNDPTCKFSSLVDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N+R+R+++++ E + VPSIV ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPERAKRFDVVYHFLSMYQNQRIRLRVSIREDEMVPSIVDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKE 198
>gi|163746198|ref|ZP_02153557.1| NADH dehydrogenase subunit C [Oceanibulbus indolifex HEL-45]
gi|161380943|gb|EDQ05353.1| NADH dehydrogenase subunit C [Oceanibulbus indolifex HEL-45]
Length = 209
Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 101/198 (51%), Positives = 133/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++++LG YI V + GEL++DV ++ L FL+ DP C F ++D+
Sbjct: 1 MSEQLQELGAYIEAKRPDCVLGWDVTRGELNMDVALANIAGLVEFLKGDPTCRFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N R+R++ E VPSI G++P ADWFEREV+DM+
Sbjct: 61 TAVDYPGRAKRFDVVYHFLSMYQNHRIRLRATAREKDMVPSITGVHPSADWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEAAKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + +D
Sbjct: 181 FMSPWEGAEYILPGDDKS 198
>gi|116251468|ref|YP_767306.1| NADH dehydrogenase subunit C [Rhizobium leguminosarum bv. viciae
3841]
gi|241204088|ref|YP_002975184.1| NADH dehydrogenase subunit C [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|218534325|sp|Q1MIL3|NUOC_RHIL3 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|115256116|emb|CAK07197.1| putative NADH-quinone oxidoreductase subunit C [Rhizobium
leguminosarum bv. viciae 3841]
gi|240857978|gb|ACS55645.1| NADH (or F420H2) dehydrogenase, subunit C [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 200
Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 113/199 (56%), Positives = 138/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + + GEL+L +LV+L +FLRDD C FVN+ID+
Sbjct: 1 MSEALTELASYLGEARGNLIAASQMKYGELTLTTTGENLVALLTFLRDDAKCGFVNLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSPK N R+RVK+A E VPS +YPGADWFERE WDMY
Sbjct: 61 CGVDWPQRELRFDVVYHLLSPKKNLRIRVKVATDEDTPVPSACPVYPGADWFERETWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRILTDYGFEGHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++D
Sbjct: 121 GVLFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++
Sbjct: 181 FMSPWEGTEYVLPGDEKAK 199
>gi|227821619|ref|YP_002825589.1| NADH dehydrogenase subunit C [Sinorhizobium fredii NGR234]
gi|227340618|gb|ACP24836.1| NADH-quinone oxidoreductase chain C 1 [Sinorhizobium fredii NGR234]
Length = 200
Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 112/199 (56%), Positives = 142/199 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + A GEL+L +L+ L +FLRDD C F++ ID+
Sbjct: 1 MSEALNELATYLREARGSLIADAAIKYGELTLTATAENLIELLTFLRDDARCGFISFIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R +RFDVVYH LSP+ N R+RVK+A A+G VPS +YPGADWFERE +DMY
Sbjct: 61 CGVDYPQRPDRFDVVYHLLSPRQNLRVRVKVATADGDPVPSATPVYPGADWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEG+PLRKDFP+TGFVE+ YDD+VK+VVY PVEL QE R++D
Sbjct: 121 GILFTGHPDLRRILTDYGFEGYPLRKDFPMTGFVEVRYDDEVKRVVYEPVELRQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + ++
Sbjct: 181 FLSPWEGTEYVLPGDEKAK 199
>gi|85703211|ref|ZP_01034315.1| NADH-quinone oxidoreductase, C subunit [Roseovarius sp. 217]
gi|85672139|gb|EAQ26996.1| NADH-quinone oxidoreductase, C subunit [Roseovarius sp. 217]
Length = 200
Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats.
Identities = 99/197 (50%), Positives = 133/197 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG YI V + GEL++DV + L FL+ D +C F +++D+
Sbjct: 1 MSATLKELGGYIEAKRVDCVLGWEVAHGELTVDVAINHIAGLAEFLKTDQNCAFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N R+R+++AV E VPSI YP A+WFERE++DM+
Sbjct: 61 TAVDYPERAKRFDVVYHFLSMYQNHRIRLRVAVREEDMVPSITEPYPAANWFEREIFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEVQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDS 197
F+SPWEG + ++
Sbjct: 181 FMSPWEGAEYILPGDEK 197
>gi|190891287|ref|YP_001977829.1| NADH-ubiquinone oxidoreductase, chain C [Rhizobium etli CIAT 652]
gi|218528026|sp|B3PVZ9|NUOC1_RHIE6 RecName: Full=NADH-quinone oxidoreductase subunit C 1; AltName:
Full=NADH dehydrogenase I subunit C 1; AltName:
Full=NDH-1 subunit C 1
gi|190696566|gb|ACE90651.1| NADH-ubiquinone oxidoreductase protein, chain C [Rhizobium etli
CIAT 652]
Length = 200
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 113/199 (56%), Positives = 138/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + + GEL+L +L+ L +FLRDD C FVN+ID+
Sbjct: 1 MSEALTELASYLGEARGNLIAASQLKYGELTLTATGENLIPLLTFLRDDAKCGFVNLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSPK N R+RVK+A E VPS G+YPGADWFERE WDMY
Sbjct: 61 CGVDWPQRELRFDVVYHLLSPKKNLRIRVKVATDEDTPVPSACGLYPGADWFERETWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRILTDYGFEGHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++D
Sbjct: 121 GVLFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++
Sbjct: 181 FMSPWEGTEYVLPGDEKAK 199
>gi|3025803|gb|AAC12756.1| NADH-ubiquinone oxidoreductase subunit NuoC [Sinorhizobium
meliloti]
Length = 201
Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 108/198 (54%), Positives = 140/198 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + A GEL++ +L++L +FLRDD C FV+ ID+
Sbjct: 1 MSEALNELASYLREGRGALIADAEVKYGELTVTAKAENLIALLTFLRDDVQCGFVSFIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R +RFDVVYH LSP+ N+R+RVK+A E VPS ++PGADWFERE +DMY
Sbjct: 61 CGVDYPQRPDRFDVVYHLLSPRQNQRVRVKVATRENDPVPSATSVFPGADWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEG+PLRKDFP+TGFVE+ YD++ K+VVY PVEL QE R++D
Sbjct: 121 GILFTGHPDLRRILTDYGFEGYPLRKDFPLTGFVEVRYDNEAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + ++
Sbjct: 181 FLSPWEGTEYVLPGDEKA 198
>gi|149914579|ref|ZP_01903109.1| NADH dehydrogenase subunit C [Roseobacter sp. AzwK-3b]
gi|149811372|gb|EDM71207.1| NADH dehydrogenase subunit C [Roseobacter sp. AzwK-3b]
Length = 202
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 101/200 (50%), Positives = 135/200 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG YI V S GEL++DV ++ +L FL+ D C F +++D+
Sbjct: 1 MSNALKELGAYIEVKRPDCVLGWDVSHGELNVDVALPNIAALVEFLKTDQTCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N R+R++ A E VPSI I+P A+WFEREV+DM+
Sbjct: 61 TAVDYPDRAKRFDVVYHFLSMYQNHRIRLRAAAREEDMVPSITEIHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEVQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
F+SPWEG + ++ K +
Sbjct: 181 FMSPWEGAEYILPGDEKKAE 200
>gi|218660526|ref|ZP_03516456.1| NADH dehydrogenase subunit C [Rhizobium etli IE4771]
Length = 200
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 111/199 (55%), Positives = 137/199 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + + GEL+L +L+ L +FLRDD C FVN+ID+
Sbjct: 1 MSEALTELASYLGEARGNLIAASQMKYGELTLTATGENLIPLLTFLRDDAKCGFVNLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSPK N R+RVK+A E +PS +YPGADWFERE WDMY
Sbjct: 61 CGVDWPQRELRFDVVYHLLSPKQNLRIRVKVATDEDTPIPSACAVYPGADWFERETWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRILTDYGFEGHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++D
Sbjct: 121 GVLFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++
Sbjct: 181 FMSPWEGTEYVLPGDEKAK 199
>gi|260427526|ref|ZP_05781505.1| NADH-quinone oxidoreductase subunit c [Citreicella sp. SE45]
gi|260422018|gb|EEX15269.1| NADH-quinone oxidoreductase subunit c [Citreicella sp. SE45]
Length = 202
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 98/199 (49%), Positives = 139/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + +LG ++ V ++GEL++DV ++ FL+ DP C F ++D+
Sbjct: 1 MTQAMSELGGHLELKRPDCVLGWNVALGELNVDVASSNIAGFVEFLKTDPSCRFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N R+RV++AV E + VPSI G++ A+WFEREV+DM+
Sbjct: 61 TAVDYPERAKRFDVVYHFLSMYQNHRIRVRVAVREDEVVPSITGVHVSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF GHPLRKDFP TG+VE+ YD+++K+VVY PV L+QE+R +D
Sbjct: 121 GIIFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYVEVRYDEELKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAQYVLPGDEKAE 199
>gi|163738799|ref|ZP_02146213.1| NADH dehydrogenase subunit C [Phaeobacter gallaeciensis BS107]
gi|161388127|gb|EDQ12482.1| NADH dehydrogenase subunit C [Phaeobacter gallaeciensis BS107]
Length = 201
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/198 (48%), Positives = 134/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG I V S EL++DV +L FL+ D C F +++D+
Sbjct: 1 MTEALNELGTQIAAKRPDCVIGWDVSFDELNVDVAPSNLAGFVEFLKADATCKFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R RFDVVYHFLS N+R+R+++++ E + +PSIVGI+P A+WFEREV+DM+
Sbjct: 61 TAVDYPDRPKRFDVVYHFLSMYQNQRIRLRVSIREDEMLPSIVGIHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKE 198
>gi|126729551|ref|ZP_01745364.1| NADH dehydrogenase subunit C [Sagittula stellata E-37]
gi|126709670|gb|EBA08723.1| NADH dehydrogenase subunit C [Sagittula stellata E-37]
Length = 202
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 100/199 (50%), Positives = 139/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
MV+ +++LGD+I V + GEL++DV ++ FL+ DP C F ++D+
Sbjct: 1 MVQALKELGDHIATKRPDCVVAWDVTHGELNVDVAPSNIRGFVDFLKTDPTCRFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RFDVVYHFLS N R+R++++V E + VPSIV ++P A+WFERE +DMY
Sbjct: 61 TGVDYPERPKRFDVVYHFLSMYQNHRIRLRVSVREDEMVPSIVPVHPSANWFERETFDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD++ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEERKRVVYEPVTLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAKYVLPGDEKTE 199
>gi|118590037|ref|ZP_01547441.1| NADH dehydrogenase subunit C [Stappia aggregata IAM 12614]
gi|118437534|gb|EAV44171.1| NADH dehydrogenase subunit C [Stappia aggregata IAM 12614]
Length = 201
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 110/198 (55%), Positives = 140/198 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L ++I S+ GEL+L VD D++ FLRD+ C FVN+ D+
Sbjct: 1 MDETLKELAEHIELGLGESLVSWKVEYGELTLTVDATDILDAIRFLRDNSSCKFVNLTDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ SR RFDVVYHFLSP N+R+RVK+A E V S+ ++PGA+WFERE +DMY
Sbjct: 61 CGVDYPSREKRFDVVYHFLSPVQNQRIRVKVATDENTPVASLTPLFPGAEWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF+GHPLRKDFPVTGFVE+ YDD+ K+VVY PV L QE R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFDGHPLRKDFPVTGFVEVRYDDEKKRVVYEPVRLNQEMRSFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKA 198
>gi|188580283|ref|YP_001923728.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium populi
BJ001]
gi|218534298|sp|B1ZA44|NUOC_METPB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|179343781|gb|ACB79193.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium populi
BJ001]
Length = 219
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 136/196 (69%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ +G+ I + +V + GEL+L V D+V ++LRDDP+C F ID+CG
Sbjct: 22 DALRAMGERITGALGPAVTDWSIAHGELTLIVQGSDIVYALTYLRDDPNCAFRCFIDICG 81
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R+ RFDVVYH LS ++N R+RVK+ VPS + ++P A+WFERE +D+YGI
Sbjct: 82 VDYPQRARRFDVVYHLLSLRHNMRVRVKVQTDAATPVPSAIPVFPAANWFERETYDLYGI 141
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R++DFL
Sbjct: 142 LFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEARVVYEPVKLTQEFRNFDFL 201
Query: 183 SPWEGVNSLFAKEDSK 198
SPWEG + + ++ K
Sbjct: 202 SPWEGTDYVLPGDEKK 217
>gi|86357238|ref|YP_469130.1| NADH dehydrogenase subunit C [Rhizobium etli CFN 42]
gi|123512313|sp|Q2K9T3|NUOC_RHIEC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|86281340|gb|ABC90403.1| NADH-ubiquinone oxidoreductase chain C protein [Rhizobium etli CFN
42]
Length = 200
Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 112/199 (56%), Positives = 138/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + + GEL+L +L++L +FLRDD C FVN+ID+
Sbjct: 1 MSEALTELASYLGEARGNLIAASQLKYGELTLTATGENLIALLTFLRDDAKCGFVNMIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSPK N R+RVK+A E VPS +YPGADWFERE WDMY
Sbjct: 61 CGVDWPQRELRFDVVYHLLSPKKNLRIRVKVATDEDTPVPSACAVYPGADWFERETWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRILTDYGFEGHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++D
Sbjct: 121 GVLFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++
Sbjct: 181 FMSPWEGTEYVLPGDEKAK 199
>gi|170742513|ref|YP_001771168.1| NADH (or F420H2) dehydrogenase subunit C [Methylobacterium sp.
4-46]
gi|218534301|sp|B0ULK6|NUOC_METS4 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|168196787|gb|ACA18734.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium sp.
4-46]
Length = 215
Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 99/196 (50%), Positives = 136/196 (69%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L D + + G+V + EL+L V+ ++V + + LRDDP C F + ID+CG
Sbjct: 19 ALQALSDRLAETLGGAVVERAIAFDELTLVVEPSEIVRVLTHLRDDPACGFRSFIDICGA 78
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D+ R RFDVVYH LS ++NRR+RVK+ E VPS++ ++P A+W+ERE +D+YGI
Sbjct: 79 DYPGREKRFDVVYHLLSLRHNRRIRVKVQTDEATPVPSVITVFPAANWYERETYDLYGIL 138
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R +DFLS
Sbjct: 139 FSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEGRVVYEPVKLSQEFRQFDFLS 198
Query: 184 PWEGVNSLFAKEDSKD 199
PWEG + + ++
Sbjct: 199 PWEGTDYVLPGDEKAK 214
>gi|17987439|ref|NP_540073.1| NADH dehydrogenase subunit C [Brucella melitensis bv. 1 str. 16M]
gi|23501691|ref|NP_697818.1| NADH dehydrogenase subunit C [Brucella suis 1330]
gi|148559816|ref|YP_001258782.1| NADH dehydrogenase subunit C [Brucella ovis ATCC 25840]
gi|161618768|ref|YP_001592655.1| NADH dehydrogenase subunit C [Brucella canis ATCC 23365]
gi|163843077|ref|YP_001627481.1| NADH dehydrogenase subunit C [Brucella suis ATCC 23445]
gi|225852320|ref|YP_002732553.1| NADH dehydrogenase subunit C [Brucella melitensis ATCC 23457]
gi|254693542|ref|ZP_05155370.1| NADH dehydrogenase subunit C [Brucella abortus bv. 3 str. Tulya]
gi|254701572|ref|ZP_05163400.1| NADH dehydrogenase subunit C [Brucella suis bv. 5 str. 513]
gi|254704119|ref|ZP_05165947.1| NADH dehydrogenase subunit C [Brucella suis bv. 3 str. 686]
gi|254706981|ref|ZP_05168809.1| NADH dehydrogenase subunit C [Brucella pinnipedialis M163/99/10]
gi|254709912|ref|ZP_05171723.1| NADH dehydrogenase subunit C [Brucella pinnipedialis B2/94]
gi|254713913|ref|ZP_05175724.1| NADH dehydrogenase subunit C [Brucella ceti M644/93/1]
gi|254717029|ref|ZP_05178840.1| NADH dehydrogenase subunit C [Brucella ceti M13/05/1]
gi|254718913|ref|ZP_05180724.1| NADH dehydrogenase subunit C [Brucella sp. 83/13]
gi|256031405|ref|ZP_05445019.1| NADH dehydrogenase subunit C [Brucella pinnipedialis M292/94/1]
gi|256044483|ref|ZP_05447387.1| NADH dehydrogenase subunit C [Brucella melitensis bv. 1 str. Rev.1]
gi|256060916|ref|ZP_05451074.1| NADH dehydrogenase subunit C [Brucella neotomae 5K33]
gi|256113334|ref|ZP_05454196.1| NADH dehydrogenase subunit C [Brucella melitensis bv. 3 str. Ether]
gi|256264181|ref|ZP_05466713.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella
melitensis bv. 2 str. 63/9]
gi|256369236|ref|YP_003106744.1| NADH dehydrogenase subunit C [Brucella microti CCM 4915]
gi|260563837|ref|ZP_05834323.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella
melitensis bv. 1 str. 16M]
gi|260566632|ref|ZP_05837102.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella suis bv.
4 str. 40]
gi|261213807|ref|ZP_05928088.1| NADH dehydrogenase subunit C [Brucella abortus bv. 3 str. Tulya]
gi|261218836|ref|ZP_05933117.1| NADH-quinone oxidoreductase subunit C [Brucella ceti M13/05/1]
gi|261314444|ref|ZP_05953641.1| NADH-quinone oxidoreductase subunit C [Brucella pinnipedialis
M163/99/10]
gi|261317458|ref|ZP_05956655.1| NADH-quinone oxidoreductase subunit C [Brucella pinnipedialis
B2/94]
gi|261321665|ref|ZP_05960862.1| NADH-quinone oxidoreductase subunit C [Brucella ceti M644/93/1]
gi|261324916|ref|ZP_05964113.1| NADH-quinone oxidoreductase subunit C [Brucella neotomae 5K33]
gi|261752125|ref|ZP_05995834.1| NADH-quinone oxidoreductase subunit C [Brucella suis bv. 5 str.
513]
gi|261754785|ref|ZP_05998494.1| NADH-quinone oxidoreductase subunit C [Brucella suis bv. 3 str.
686]
gi|265983900|ref|ZP_06096635.1| NADH-quinone oxidoreductase subunit C [Brucella sp. 83/13]
gi|265988494|ref|ZP_06101051.1| NADH-quinone oxidoreductase subunit C [Brucella pinnipedialis
M292/94/1]
gi|265990907|ref|ZP_06103464.1| NADH-quinone oxidoreductase subunit C [Brucella melitensis bv. 1
str. Rev.1]
gi|265994744|ref|ZP_06107301.1| NADH-quinone oxidoreductase subunit C [Brucella melitensis bv. 3
str. Ether]
gi|294852161|ref|ZP_06792834.1| NADH-quinone oxidoreductase subunit C [Brucella sp. NVSL 07-0026]
gi|306838239|ref|ZP_07471091.1| NADH dehydrogenase subunit C [Brucella sp. NF 2653]
gi|306843741|ref|ZP_07476340.1| NADH dehydrogenase subunit C [Brucella sp. BO1]
gi|81752804|sp|Q8G1B5|NUOC_BRUSU RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|81851725|sp|Q8YGK2|NUOC_BRUME RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534260|sp|A9MAI1|NUOC_BRUC2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534262|sp|A5VPY5|NUOC_BRUO2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534264|sp|B0CLD1|NUOC_BRUSI RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|254767810|sp|C0RIE1|NUOC_BRUMB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|17983132|gb|AAL52337.1| NADH-quinone oxidoreductase chain c [Brucella melitensis bv. 1 str.
16M]
gi|23347613|gb|AAN29733.1| NADH dehydrogenase I, C subunit [Brucella suis 1330]
gi|148371073|gb|ABQ61052.1| NADH dehydrogenase I, C subunit [Brucella ovis ATCC 25840]
gi|161335579|gb|ABX61884.1| NADH (or F420H2) dehydrogenase, subunit C [Brucella canis ATCC
23365]
gi|163673800|gb|ABY37911.1| NADH (or F420H2) dehydrogenase, subunit C [Brucella suis ATCC
23445]
gi|225640685|gb|ACO00599.1| NADH dehydrogenase subunit C [Brucella melitensis ATCC 23457]
gi|255999396|gb|ACU47795.1| NADH dehydrogenase subunit C [Brucella microti CCM 4915]
gi|260153853|gb|EEW88945.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella
melitensis bv. 1 str. 16M]
gi|260156150|gb|EEW91230.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella suis bv.
4 str. 40]
gi|260915414|gb|EEX82275.1| NADH dehydrogenase subunit C [Brucella abortus bv. 3 str. Tulya]
gi|260923925|gb|EEX90493.1| NADH-quinone oxidoreductase subunit C [Brucella ceti M13/05/1]
gi|261294355|gb|EEX97851.1| NADH-quinone oxidoreductase subunit C [Brucella ceti M644/93/1]
gi|261296681|gb|EEY00178.1| NADH-quinone oxidoreductase subunit C [Brucella pinnipedialis
B2/94]
gi|261300896|gb|EEY04393.1| NADH-quinone oxidoreductase subunit C [Brucella neotomae 5K33]
gi|261303470|gb|EEY06967.1| NADH-quinone oxidoreductase subunit C [Brucella pinnipedialis
M163/99/10]
gi|261741878|gb|EEY29804.1| NADH-quinone oxidoreductase subunit C [Brucella suis bv. 5 str.
513]
gi|261744538|gb|EEY32464.1| NADH-quinone oxidoreductase subunit C [Brucella suis bv. 3 str.
686]
gi|262765857|gb|EEZ11646.1| NADH-quinone oxidoreductase subunit C [Brucella melitensis bv. 3
str. Ether]
gi|263001691|gb|EEZ14266.1| NADH-quinone oxidoreductase subunit C [Brucella melitensis bv. 1
str. Rev.1]
gi|263094399|gb|EEZ18244.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella
melitensis bv. 2 str. 63/9]
gi|264660691|gb|EEZ30952.1| NADH-quinone oxidoreductase subunit C [Brucella pinnipedialis
M292/94/1]
gi|264662492|gb|EEZ32753.1| NADH-quinone oxidoreductase subunit C [Brucella sp. 83/13]
gi|294820750|gb|EFG37749.1| NADH-quinone oxidoreductase subunit C [Brucella sp. NVSL 07-0026]
gi|306275932|gb|EFM57645.1| NADH dehydrogenase subunit C [Brucella sp. BO1]
gi|306406683|gb|EFM62910.1| NADH dehydrogenase subunit C [Brucella sp. NF 2653]
gi|326408827|gb|ADZ65892.1| NADH dehydrogenase subunit C [Brucella melitensis M28]
gi|326538543|gb|ADZ86758.1| NADH dehydrogenase subunit C [Brucella melitensis M5-90]
Length = 202
Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + +L YI ++ A + GEL+L V L+ + +FLRDD C FVN+ D
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYGELTLCVPVASLIGVLTFLRDDVQCQFVNLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ R RFDVVY LSP+ N+R+RVK+ E VPS V ++ GA+W+ERE +DM
Sbjct: 61 ISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ Y+D++K+VVY PV+L QE R++
Sbjct: 121 YGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRNF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + + ++
Sbjct: 181 DFLSPWEGTDYVLPGDEKAK 200
>gi|306841958|ref|ZP_07474635.1| NADH dehydrogenase subunit C [Brucella sp. BO2]
gi|306287949|gb|EFM59360.1| NADH dehydrogenase subunit C [Brucella sp. BO2]
Length = 202
Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + +L YI ++ A + GEL+L V L+ + +FLRDD C FVN+ D
Sbjct: 1 MSEEALGELSGYIRERLGDAIEDANLAYGELTLCVPVASLIGVLTFLRDDVQCQFVNLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ R RFDVVY LSP+ N+R+RVK+ E VPS V ++ GA+W+ERE +DM
Sbjct: 61 ISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ Y+D++K+VVY PV+L QE R++
Sbjct: 121 YGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRNF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + + ++
Sbjct: 181 DFLSPWEGTDYVLPGDEKAK 200
>gi|13471405|ref|NP_102971.1| NADH dehydrogenase subunit C [Mesorhizobium loti MAFF303099]
gi|81855685|sp|Q98KQ7|NUOC_RHILO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|14022147|dbj|BAB48757.1| NADH-ubiquinone dehydrogenase chain C 1 [Mesorhizobium loti
MAFF303099]
Length = 201
Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 109/199 (54%), Positives = 144/199 (72%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ G V A + GEL++ V+ +L+ + +FLRDD C F++IID+
Sbjct: 1 MAASLSELSTYLGERLIGRVNDADIAYGELTMHVEPRNLIEVVTFLRDDQRCQFISIIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CG D+ SR RFDVVYH LSPK N R+R+K+ E VPSI G++PGADWFERE +D+Y
Sbjct: 61 CGADYPSRPKRFDVVYHLLSPKQNVRIRLKVQADEETMVPSITGVFPGADWFERETYDLY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YDD+ K+V+Y PVEL QE R++D
Sbjct: 121 GVLFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDDEAKRVIYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKAK 199
>gi|110680470|ref|YP_683477.1| NADH dehydrogenase subunit C [Roseobacter denitrificans OCh 114]
gi|122972618|sp|Q163Q2|NUOC_ROSDO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|109456586|gb|ABG32791.1| NADH-quinone oxidoreductase chain C [Roseobacter denitrificans OCh
114]
Length = 199
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 96/199 (48%), Positives = 138/199 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG+YI + V + EL+LDV ++V L FL+ D C F +ID+
Sbjct: 1 MSEPLQELGNYIATKRADCVLAWDVTNKELNLDVTPSNIVGLVEFLKTDATCRFSTLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ R+DVVYH LS N R+R+++++ E + +PS++ ++P A+WFEREV+DM+
Sbjct: 61 TAVDYTGRAKRYDVVYHLLSMYQNHRVRLRVSIREDQMMPSVISVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEAQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++ K+
Sbjct: 181 FMSPWEGAEYILPGDEKKE 199
>gi|90423903|ref|YP_532273.1| NADH dehydrogenase subunit C [Rhodopseudomonas palustris BisB18]
gi|122476334|sp|Q215I2|NUOC_RHOPB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|90105917|gb|ABD87954.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodopseudomonas
palustris BisB18]
Length = 199
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 102/199 (51%), Positives = 141/199 (70%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + +LG+ I + +V A + GEL+L VD +V + FLRDDP C F++ ID+
Sbjct: 1 MTDLAELGETIKAALPAAVSNASIAFGELTLTVDAAKIVEVVRFLRDDPRCRFISPIDVT 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ R+NRFDVV+HFLSP N R+R++ +E VPS++ ++PG DWFERE +D+YG
Sbjct: 61 AVDYPGRANRFDVVWHFLSPSLNTRIRLRAEASETTQVPSLIDLFPGVDWFEREAYDLYG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ F GHPD+RRILTDYGF+GHPLRKDFP++GFVE+ YDD K+VVY PV L QE R +DF
Sbjct: 121 VIFTGHPDMRRILTDYGFDGHPLRKDFPLSGFVEVRYDDDEKRVVYEPVRLNQEFRKFDF 180
Query: 182 LSPWEGVNSLFAKEDSKDD 200
LSPWEG + ++ + +
Sbjct: 181 LSPWEGADYPLPGDEKRSE 199
>gi|254453925|ref|ZP_05067362.1| NADH-quinone oxidoreductase, c subunit [Octadecabacter antarcticus
238]
gi|198268331|gb|EDY92601.1| NADH-quinone oxidoreductase, c subunit [Octadecabacter antarcticus
238]
Length = 215
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 92/199 (46%), Positives = 132/199 (66%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ +LG +I V + GEL+++V +L FL+ D C F +++D+
Sbjct: 11 EDLNELGQHIELKRPDCVLSWDVTGGELTVNVAPANLAGFIEFLKVDTACKFSSLVDITA 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R RFDVVYHFLS N R+R+++ V E + V SI ++P A+WFEREV+DM+G+
Sbjct: 71 VDYPGRDKRFDVVYHFLSMYQNHRIRLRVKVREDEMVASITDVHPSANWFEREVFDMFGL 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F+GHPDLRRILTDYGF G+PLRKDFP +G+ E+ YD+ K+VVY P+ L+QE+R +DF+
Sbjct: 131 IFKGHPDLRRILTDYGFRGYPLRKDFPTSGYTEVRYDEVQKRVVYEPISLVQEYRQFDFM 190
Query: 183 SPWEGVNSLFAKEDSKDDM 201
SPWEG + +D D+
Sbjct: 191 SPWEGAQYILPGDDKADEK 209
>gi|149202672|ref|ZP_01879644.1| NADH dehydrogenase subunit C [Roseovarius sp. TM1035]
gi|149143954|gb|EDM31988.1| NADH dehydrogenase subunit C [Roseovarius sp. TM1035]
Length = 200
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 99/197 (50%), Positives = 133/197 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG YI + V + GEL++DV + L FL+ D +C F ++D+
Sbjct: 1 MSATLKELGGYIEHKRGDCVLGWDVAFGELTVDVALNHIDGLAEFLKTDQNCAFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N R+R+++AV + VPSI YP A+WFEREV+DM+
Sbjct: 61 TAVDYPDRAKRFDVVYHFLSMYQNHRIRLRVAVRDEDMVPSITEAYPAANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEVQKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDS 197
F+SPWEG + ++
Sbjct: 181 FMSPWEGAEYILPGDEK 197
>gi|83311884|ref|YP_422148.1| NADH dehydrogenase subunit C [Magnetospirillum magneticum AMB-1]
gi|123541538|sp|Q2W3I6|NUOC_MAGMM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|82946725|dbj|BAE51589.1| NADH:ubiquinone oxidoreductase 27 kD subunit [Magnetospirillum
magneticum AMB-1]
Length = 199
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 142/200 (71%), Gaps = 2/200 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + ++DLG+YI + V + GELSL V +V + ++L+DD C F ++D
Sbjct: 1 MTQALKDLGEYIAQALPQDVLGTEVNRCGELSLTVKAASIVKVMTYLKDDAGCLFKQLVD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+CGVD+ R RFDVVYH LS K+N+R+RVK+A E +VPS+ G++ A WFEREVWDM
Sbjct: 61 VCGVDWPGREQRFDVVYHLLSMKHNQRVRVKVATDEETAVPSVTGVFSSAGWFEREVWDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F HPDLRRILTDYGFEGHPLRKDFP+TG+VE+ YDD+ K+VVY PV+L Q+ R +
Sbjct: 121 YGVLFSDHPDLRRILTDYGFEGHPLRKDFPLTGYVEMRYDDETKRVVYEPVKLTQDFRSF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + ++ +
Sbjct: 181 DFLSPWEGPG-MLPGDEKAN 199
>gi|225627301|ref|ZP_03785338.1| NADH dehydrogenase subunit C [Brucella ceti str. Cudo]
gi|256159526|ref|ZP_05457294.1| NADH dehydrogenase subunit C [Brucella ceti M490/95/1]
gi|256254813|ref|ZP_05460349.1| NADH dehydrogenase subunit C [Brucella ceti B1/94]
gi|260168539|ref|ZP_05755350.1| NADH dehydrogenase subunit C [Brucella sp. F5/99]
gi|261221994|ref|ZP_05936275.1| NADH-quinone oxidoreductase subunit C [Brucella ceti B1/94]
gi|261758012|ref|ZP_06001721.1| NADH dehydrogenase subunit C [Brucella sp. F5/99]
gi|265997958|ref|ZP_06110515.1| NADH-quinone oxidoreductase subunit C [Brucella ceti M490/95/1]
gi|225617306|gb|EEH14351.1| NADH dehydrogenase subunit C [Brucella ceti str. Cudo]
gi|260920578|gb|EEX87231.1| NADH-quinone oxidoreductase subunit C [Brucella ceti B1/94]
gi|261737996|gb|EEY25992.1| NADH dehydrogenase subunit C [Brucella sp. F5/99]
gi|262552426|gb|EEZ08416.1| NADH-quinone oxidoreductase subunit C [Brucella ceti M490/95/1]
Length = 202
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + +L YI ++ A + GEL+L V L+ + +FLRDD C FVN+ D
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYGELTLCVPVASLIGVLTFLRDDVQCQFVNLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ R RFDVVY LSP+ N+R+RVK+ E VPS + ++ GA+W+ERE +DM
Sbjct: 61 ISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAIPVFFGAEWYEREAYDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ Y+D++K+VVY PV+L QE R++
Sbjct: 121 YGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRNF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + + ++
Sbjct: 181 DFLSPWEGTDYVLPGDEKAK 200
>gi|56697622|ref|YP_167991.1| NADH dehydrogenase subunit C [Ruegeria pomeroyi DSS-3]
gi|81676163|sp|Q5LPR5|NUOC_SILPO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|56679359|gb|AAV96025.1| NADH-quinone oxidoreductase, C subunit [Ruegeria pomeroyi DSS-3]
Length = 200
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 96/199 (48%), Positives = 137/199 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG ++ + + + GEL++DV +LV FLR D C F ++D+
Sbjct: 1 MSDALRELGTHLELKRADCILSWDVTFGELNVDVAPSNLVDFVDFLRSDSSCRFSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N+R+R+++++ E VPSI ++P A+WFEREV+DM+
Sbjct: 61 TAVDYPERAKRFDVVYHFLSMYQNQRIRLRVSIREDDMVPSITDVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAEKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + + ++ K+
Sbjct: 181 FMSPWEGADYILPGDEKKE 199
>gi|84502606|ref|ZP_01000725.1| NADH dehydrogenase subunit C [Oceanicola batsensis HTCC2597]
gi|84389001|gb|EAQ01799.1| NADH dehydrogenase subunit C [Oceanicola batsensis HTCC2597]
Length = 202
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 93/201 (46%), Positives = 137/201 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG +I V ++ EL++DV ++ FLR D C F +ID+
Sbjct: 1 MTEALKELGSHIEMKRPDCVLGWEITLDELTIDVTPANIAGFVEFLRTDATCRFTTLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RFD++YHFLS N R+R+++A E + VP+I ++P A+W+EREV+DM+
Sbjct: 61 TGVDYPERPKRFDLIYHFLSMYQNHRVRLRLAAREDEMVPTITEVHPSANWYEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPD+RR+LTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 121 GIIFSGHPDMRRLLTDYGFRGYPLRKDFPTTGYTEVRYDETTKRVVYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
F+SPWEG N + ++ K++
Sbjct: 181 FMSPWEGANYILPGDEKKEEA 201
>gi|163741490|ref|ZP_02148881.1| NADH dehydrogenase subunit C [Phaeobacter gallaeciensis 2.10]
gi|161385224|gb|EDQ09602.1| NADH dehydrogenase subunit C [Phaeobacter gallaeciensis 2.10]
Length = 201
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 94/198 (47%), Positives = 133/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG I V + EL++DV +L FL+ D C F +++D+
Sbjct: 1 MTEALNELGTQIAAKRPDCVIGWDVTFDELNVDVAPSNLAGFVEFLKADATCKFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R RFDVVYHFLS N+R+R+++++ E + +PSIV I+P ++WFEREV+DM+
Sbjct: 61 TAVDYPDRPKRFDVVYHFLSMYQNQRIRLRVSIREDEMLPSIVTIHPSSNWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAQKRVVYEPVNLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKE 198
>gi|254485931|ref|ZP_05099136.1| NADH-quinone oxidoreductase chain c [Roseobacter sp. GAI101]
gi|214042800|gb|EEB83438.1| NADH-quinone oxidoreductase chain c [Roseobacter sp. GAI101]
Length = 201
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 98/198 (49%), Positives = 137/198 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ +LG Y+ + S GEL++DV +L L F++ D C F +++D+
Sbjct: 1 MSEQLNELGAYLEAKRPDCILGWDISHGELNMDVTKANLPGLVDFIKGDATCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N+R+R+++A+ E VPSIV I+P A+WFEREV+DM+
Sbjct: 61 TAVDYPGRAKRFDVVYHFLSMYQNQRIRLRVAIREEDMVPSIVDIHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF GHPLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKE 198
>gi|323138147|ref|ZP_08073220.1| NADH (or F420H2) dehydrogenase, subunit C [Methylocystis sp. ATCC
49242]
gi|322396609|gb|EFX99137.1| NADH (or F420H2) dehydrogenase, subunit C [Methylocystis sp. ATCC
49242]
Length = 200
Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 138/198 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
MV + E LG I ++ G+V + GEL+L V + + +FLRDD C FVN+ID+
Sbjct: 1 MVGEFEALGARISDALPGAVTNVNVAYGELTLTVARDRWLDVATFLRDDAECLFVNVIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
D+ R RF+VV H SPK+NRR+R+K +E V S+V ++PGADW+ERE +D++
Sbjct: 61 TAADYPEREERFEVVAHLQSPKHNRRIRIKTPASEETPVASLVPLFPGADWYERETYDLF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRRI+TDYGF+GHPLRKDFP+TGFVE+ YDD+ K+VVY PV L QE+R++D
Sbjct: 121 GVIFSGHPDLRRIMTDYGFDGHPLRKDFPMTGFVEVRYDDEQKRVVYEPVRLTQEYRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWE V ++
Sbjct: 181 FLSPWEAVQYDLPGDEKA 198
>gi|254437425|ref|ZP_05050919.1| NADH dehydrogenase, subunit C subfamily, putative [Octadecabacter
antarcticus 307]
gi|198252871|gb|EDY77185.1| NADH dehydrogenase, subunit C subfamily, putative [Octadecabacter
antarcticus 307]
Length = 211
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 93/199 (46%), Positives = 129/199 (64%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + +LG +I V + GEL+++V +L FL+ D C F +++D+
Sbjct: 10 IEALNELGIHIEMKRPDCVLSWDVTGGELTVNVAPANLAVFIEFLKVDSACKFSSLVDIT 69
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ R RFDVVYHFLS N R+R++ V + V SI ++ A+WFEREV+DM+G
Sbjct: 70 AVDYPGRDKRFDVVYHFLSMYQNHRIRLRAKVRSDEMVASITDVHKSANWFEREVFDMFG 129
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F+GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +DF
Sbjct: 130 IIFKGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEVQKRVVYEPVSLVQEYRQFDF 189
Query: 182 LSPWEGVNSLFAKEDSKDD 200
+SPWEG + +D D
Sbjct: 190 MSPWEGAQYILPGDDKAKD 208
>gi|146278042|ref|YP_001168201.1| NADH dehydrogenase subunit C [Rhodobacter sphaeroides ATCC 17025]
gi|226737323|sp|A4WU32|NUOC_RHOS5 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|145556283|gb|ABP70896.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodobacter sphaeroides
ATCC 17025]
Length = 200
Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats.
Identities = 96/198 (48%), Positives = 133/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L ++ ++ GEL+LDV +V L FLR D C F +++D+
Sbjct: 1 MAEALQELAAHVEMRQPDAILGHRIEFGELTLDVAPNRIVGLVEFLRTDARCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD R RFD+VYHFLS N R+R+K+ V E ++V SI ++P A+WFEREV+DM+
Sbjct: 61 TAVDHPERPARFDMVYHFLSMYQNHRIRLKMQVREDETVASIHSVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHP+RKDFP TG+ E+ YD+ K+V+Y PV+L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVRYDEVQKRVIYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + +D
Sbjct: 181 FLSPWEGADYILPGDDKA 198
>gi|163793189|ref|ZP_02187165.1| NADH dehydrogenase subunit C [alpha proteobacterium BAL199]
gi|159181835|gb|EDP66347.1| NADH dehydrogenase subunit C [alpha proteobacterium BAL199]
Length = 214
Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats.
Identities = 97/201 (48%), Positives = 130/201 (64%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + DL +I + V GEL L ++ + +FLRDD C F ++DLC
Sbjct: 10 ITALRDLAAHIESQLDQDVSDVTLIQGELCLRCRPSSVIKVLTFLRDDSQCQFKALMDLC 69
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD R RFDVVY+ LS + N R+R+K+A E VPS G++ A W ERE WD++G
Sbjct: 70 GVDHPQREQRFDVVYNLLSIRQNTRVRLKVATDENTPVPSATGLFSSAGWMEREAWDLFG 129
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I+F HPDLRR+LTDYGFEGHPLRKDFP+TG+VE+ YDD K+VVY PV+L Q+ R++DF
Sbjct: 130 IYFSEHPDLRRLLTDYGFEGHPLRKDFPLTGYVEVRYDDAQKRVVYEPVKLTQDFRNFDF 189
Query: 182 LSPWEGVNSLFAKEDSKDDMS 202
LSPWEG + ++ D +
Sbjct: 190 LSPWEGARAALPGDEKADQTA 210
>gi|62289753|ref|YP_221546.1| NADH dehydrogenase subunit C [Brucella abortus bv. 1 str. 9-941]
gi|82699681|ref|YP_414255.1| NADH dehydrogenase subunit C [Brucella melitensis biovar Abortus
2308]
gi|189023998|ref|YP_001934766.1| NADH dehydrogenase subunit C [Brucella abortus S19]
gi|237815240|ref|ZP_04594238.1| NADH (or F420H2) dehydrogenase, subunit C [Brucella abortus str.
2308 A]
gi|254689060|ref|ZP_05152314.1| NADH dehydrogenase subunit C [Brucella abortus bv. 6 str. 870]
gi|254697194|ref|ZP_05159022.1| NADH dehydrogenase subunit C [Brucella abortus bv. 2 str. 86/8/59]
gi|254730090|ref|ZP_05188668.1| NADH dehydrogenase subunit C [Brucella abortus bv. 4 str. 292]
gi|256257309|ref|ZP_05462845.1| NADH dehydrogenase subunit C [Brucella abortus bv. 9 str. C68]
gi|260545497|ref|ZP_05821238.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella abortus
NCTC 8038]
gi|260754558|ref|ZP_05866906.1| NADH dehydrogenase subunit C [Brucella abortus bv. 6 str. 870]
gi|260757779|ref|ZP_05870127.1| NADH dehydrogenase subunit C [Brucella abortus bv. 4 str. 292]
gi|260761604|ref|ZP_05873947.1| NADH dehydrogenase subunit C [Brucella abortus bv. 2 str. 86/8/59]
gi|260883585|ref|ZP_05895199.1| NADH-quinone oxidoreductase subunit C [Brucella abortus bv. 9 str.
C68]
gi|297248158|ref|ZP_06931876.1| NADH dehydrogenase I subunit C [Brucella abortus bv. 5 str. B3196]
gi|75505304|sp|Q57DU9|NUOC_BRUAB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|123546614|sp|Q2YNC7|NUOC_BRUA2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534245|sp|B2S545|NUOC_BRUA1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|62195885|gb|AAX74185.1| NuoC, NADH dehydrogenase I, C subunit [Brucella abortus bv. 1 str.
9-941]
gi|82615782|emb|CAJ10780.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Brucella
melitensis biovar Abortus 2308]
gi|189019570|gb|ACD72292.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Brucella abortus
S19]
gi|237790077|gb|EEP64287.1| NADH (or F420H2) dehydrogenase, subunit C [Brucella abortus str.
2308 A]
gi|260096904|gb|EEW80779.1| trifunctional NADH dehydrogenase I subunit B/C/D [Brucella abortus
NCTC 8038]
gi|260668097|gb|EEX55037.1| NADH dehydrogenase subunit C [Brucella abortus bv. 4 str. 292]
gi|260672036|gb|EEX58857.1| NADH dehydrogenase subunit C [Brucella abortus bv. 2 str. 86/8/59]
gi|260674666|gb|EEX61487.1| NADH dehydrogenase subunit C [Brucella abortus bv. 6 str. 870]
gi|260873113|gb|EEX80182.1| NADH-quinone oxidoreductase subunit C [Brucella abortus bv. 9 str.
C68]
gi|297175327|gb|EFH34674.1| NADH dehydrogenase I subunit C [Brucella abortus bv. 5 str. B3196]
Length = 202
Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats.
Identities = 104/200 (52%), Positives = 138/200 (69%), Gaps = 1/200 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + +L YI ++ A + GEL+L V L+ + + LRDD C FVN+ D
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYGELTLCVPVASLIGVLTLLRDDVQCQFVNLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ R RFDVVY LSP+ N+R+RVK+ E VPS V ++ GA+W+ERE +DM
Sbjct: 61 ISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ Y+D++K+VVY PV+L QE R++
Sbjct: 121 YGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRNF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + + ++
Sbjct: 181 DFLSPWEGTDYVLPGDEKAK 200
>gi|218529212|ref|YP_002420028.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium
chloromethanicum CM4]
gi|218521515|gb|ACK82100.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium
chloromethanicum CM4]
Length = 219
Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 98/195 (50%), Positives = 134/195 (68%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ +G+ I + +V + GEL+L V D+V ++LRD+P C F ID+CG
Sbjct: 22 DALRAMGERIAGALGPAVTEWAITRGELTLVVQGSDIVYALTYLRDEPACAFRCFIDICG 81
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R+ RFDVVYH LS ++N R+RVK+ VPS + ++P A+W+ERE +D+YGI
Sbjct: 82 VDYPQRARRFDVVYHLLSLRHNMRVRVKVQTDAATPVPSAIPVFPAANWYERETYDLYGI 141
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R++DFL
Sbjct: 142 LFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEARVVYEPVKLTQEFRNFDFL 201
Query: 183 SPWEGVNSLFAKEDS 197
SPWEG + + ++
Sbjct: 202 SPWEGTDYVLPGDEK 216
>gi|254560051|ref|YP_003067146.1| NADH-quinone oxidoreductase subunit C [Methylobacterium extorquens
DM4]
gi|254267329|emb|CAX23161.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
[Methylobacterium extorquens DM4]
Length = 224
Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 98/195 (50%), Positives = 134/195 (68%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ +G+ I + +V + GEL+L V D+V ++LRD+P C F ID+CG
Sbjct: 27 DALRAMGERIAGALGPAVTEWAITRGELTLVVQGSDIVYALTYLRDEPACAFRCFIDICG 86
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R+ RFDVVYH LS ++N R+RVK+ VPS + ++P A+W+ERE +D+YGI
Sbjct: 87 VDYPQRARRFDVVYHLLSLRHNMRVRVKVQTDAATPVPSAIPVFPAANWYERETYDLYGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R++DFL
Sbjct: 147 LFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEARVVYEPVKLTQEFRNFDFL 206
Query: 183 SPWEGVNSLFAKEDS 197
SPWEG + + ++
Sbjct: 207 SPWEGTDYVLPGDEK 221
>gi|239831688|ref|ZP_04680017.1| NADH (or F420H2) dehydrogenase, subunit C [Ochrobactrum intermedium
LMG 3301]
gi|239823955|gb|EEQ95523.1| NADH (or F420H2) dehydrogenase, subunit C [Ochrobactrum intermedium
LMG 3301]
Length = 204
Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 102/200 (51%), Positives = 140/200 (70%), Gaps = 1/200 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + +L YI ++ A + GEL+L V ++S+ +FLRDD C FVN+ D
Sbjct: 3 MSEEALGELSGYIKERLGDAIEEAKLAYGELTLSVPVASIISVLTFLRDDVQCQFVNLTD 62
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ R+ RFDVVY +SP+ N+R+RVK+ E VPS V ++ GA+WFERE +DM
Sbjct: 63 ISGVDYPQRAKRFDVVYQLMSPRQNQRIRVKVQADEDTLVPSAVPVFVGAEWFERETYDM 122
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ Y++++K+V Y PV+L QE R++
Sbjct: 123 YGVLFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNNELKRVAYEPVQLRQEFRNF 182
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + + ++
Sbjct: 183 DFLSPWEGTDYVLPGDEKAK 202
>gi|83858413|ref|ZP_00951935.1| NADH dehydrogenase subunit C [Oceanicaulis alexandrii HTCC2633]
gi|83853236|gb|EAP91088.1| NADH dehydrogenase subunit C [Oceanicaulis alexandrii HTCC2633]
Length = 205
Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 139/198 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG ++ + S VR + EL+L + +V + FLRDD C F +ID+
Sbjct: 3 MTETMTELGAHLSAALSDDVRSVDVAHEELTLTIHRDRVVKVLRFLRDDALCRFTTLIDI 62
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ SRS+RFDVVYH LS N+R+RV ++ E V S+V ++P A+WFERE +DMY
Sbjct: 63 CGVDWPSRSDRFDVVYHLLSMHLNQRIRVVLSTDEDTPVNSVVELFPAANWFEREAFDMY 122
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F+ HPDLRRILTDYGF GHPLRKDFP++GF ++ YDD+ K+VVY PVEL+QE+RD+D
Sbjct: 123 GILFDHHPDLRRILTDYGFHGHPLRKDFPLSGFNQVVYDDEQKRVVYEPVELVQEYRDFD 182
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + ++
Sbjct: 183 FLSPWEGAKYVLPGDEKA 200
>gi|23013442|ref|ZP_00053336.1| COG0852: NADH:ubiquinone oxidoreductase 27 kD subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 199
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 107/200 (53%), Positives = 140/200 (70%), Gaps = 2/200 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + ++DLGDYI + V + ELSL V +V + SFL+DD C F ++D
Sbjct: 1 MTQALKDLGDYIAQALPQDVLGTEVNRCDELSLTVKAASIVKVLSFLKDDAGCLFKQLVD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+CGVD+ R +RFDVVYH LS K+N+R+RVK+A E +VPS ++ A WFEREVWDM
Sbjct: 61 VCGVDWPGRESRFDVVYHLLSMKHNQRIRVKVATDEETAVPSATAVFSSAGWFEREVWDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F HPDLRRILTDYGFEGHPLRKDFP+TG+VE+ YDD+ K+VVY PV+L Q+ R +
Sbjct: 121 YGVLFSDHPDLRRILTDYGFEGHPLRKDFPLTGYVEMRYDDETKRVVYEPVKLTQDFRSF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + ++ +
Sbjct: 181 DFLSPWEGPG-MLPGDEKAN 199
>gi|240137580|ref|YP_002962051.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
[Methylobacterium extorquens AM1]
gi|240007548|gb|ACS38774.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
[Methylobacterium extorquens AM1]
Length = 224
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 99/195 (50%), Positives = 134/195 (68%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ +G+ I + +V S GEL+L V D+V ++LRD+P C F ID+CG
Sbjct: 27 DALRAMGERIAGALGPAVTEWAISRGELTLVVQGSDIVYALTYLRDEPACAFRCFIDICG 86
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R+ RFDVVYH LS ++N R+RVK+ VPS + ++P A+W+ERE +D+YGI
Sbjct: 87 VDYPQRARRFDVVYHLLSLRHNMRVRVKVQTDAATPVPSAIPVFPAANWYERETYDLYGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R++DFL
Sbjct: 147 LFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEARVVYEPVKLTQEFRNFDFL 206
Query: 183 SPWEGVNSLFAKEDS 197
SPWEG + + ++
Sbjct: 207 SPWEGTDYVLPGDEK 221
>gi|163850515|ref|YP_001638558.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium
extorquens PA1]
gi|218534307|sp|A9W1N1|NUOC_METEP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|163662120|gb|ABY29487.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium
extorquens PA1]
Length = 219
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 98/195 (50%), Positives = 134/195 (68%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ +G+ I + +V + GEL+L V D+V ++LRD+P C F ID+CG
Sbjct: 22 DALRAMGERIAGALGPAVTEWAITRGELTLVVQGSDIVYALTYLRDEPACAFRCFIDICG 81
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R+ RFDVVYH LS ++N R+RVK+ VPS + ++P A+W+ERE +D+YGI
Sbjct: 82 VDYPQRARRFDVVYHLLSLRHNMRVRVKVQTDAATPVPSAIPVFPAANWYERETYDLYGI 141
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R++DFL
Sbjct: 142 LFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEARVVYEPVKLTQEFRNFDFL 201
Query: 183 SPWEGVNSLFAKEDS 197
SPWEG + + ++
Sbjct: 202 SPWEGTDYVLPGDEK 216
>gi|255263161|ref|ZP_05342503.1| NADH-quinone oxidoreductase subunit c [Thalassiobium sp. R2A62]
gi|255105496|gb|EET48170.1| NADH-quinone oxidoreductase subunit c [Thalassiobium sp. R2A62]
Length = 203
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 99/201 (49%), Positives = 135/201 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++ DLG +IV V S GEL++ V +LV FL+ D C ++D+
Sbjct: 1 MSQEMNDLGAHIVAKRPDCVLSHEVSYGELNVTVSVSNLVDFVEFLKSDATCKLSTLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ SR+ RFDVVYH LS N R+R+++ + E VPSI+ +YP A+WFEREV+DM+
Sbjct: 61 TAVDYPSRAKRFDVVYHMLSMYQNHRIRIRVQIREEDMVPSIIDVYPAANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAEKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
F+SPWEG + +D ++
Sbjct: 181 FMSPWEGAEYILPGDDKVEEA 201
>gi|114771818|ref|ZP_01449211.1| NADH dehydrogenase subunit C [alpha proteobacterium HTCC2255]
gi|114547634|gb|EAU50525.1| NADH dehydrogenase subunit C [alpha proteobacterium HTCC2255]
Length = 202
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/200 (51%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + DLG+ I + +V + VN GEL L+V +V++ FL+ + F +ID
Sbjct: 1 MSNTLTDLGEVIASKLPNAVTASGVNDFGELVLNVKLEKIVTVVEFLKTNSAMRFSTLID 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ +D+ SR NRF++VYHFLS N R+R+K+ V+E VPSI I+PGA+WFEREV+DM
Sbjct: 61 ITAIDYPSRKNRFEMVYHFLSMYTNMRIRLKLQVSEDGMVPSICEIHPGANWFEREVFDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F GHPDLRRILTDYGF GHPLRKDFP TG+ EL YD+ K+VVY PV L QE+R +
Sbjct: 121 YGVLFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTELRYDEVGKRVVYEPVTLTQEYRQF 180
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DF+SPWEG + +D +
Sbjct: 181 DFMSPWEGAQYILPGDDKVE 200
>gi|260574760|ref|ZP_05842763.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodobacter sp. SW2]
gi|259023177|gb|EEW26470.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodobacter sp. SW2]
Length = 200
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 131/198 (66%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L + S +V GEL+++V L L FLR D C F +ID+
Sbjct: 1 MPEALNELAGLLELKQSNAVLGHAVENGELTVEVSVARLHGLVDFLRGDAACRFSTLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYH LS N+R+R+ AV E + VPS+V ++PGA+W+EREV+DM+
Sbjct: 61 TAVDYPGRAARFDVVYHLLSMYQNQRIRLVAAVREDEMVPSLVSLFPGANWYEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHPLRKDFP TG+ E+ YDD K+VVY PV L QE+R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDDVQKRVVYEPVSLTQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAAYILPGDEKQ 198
>gi|89053662|ref|YP_509113.1| NADH dehydrogenase subunit C [Jannaschia sp. CCS1]
gi|122499243|sp|Q28T74|NUOC_JANSC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|88863211|gb|ABD54088.1| NADH dehydrogenase subunit C [Jannaschia sp. CCS1]
Length = 207
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 99/203 (48%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +++L +Y+ S V + GELS+ V +V FL+ D C F +ID
Sbjct: 1 MSDALKELAEYLSEKRSDDVVSTDVNAMGELSVTVAPAQMVGFIEFLKTDRTCRFSTLID 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ SR RFDVVYHFLS N R+RV+ A+ E ++PSI G++PGA W+ERE++DM
Sbjct: 61 ITAVDYPSRDRRFDVVYHFLSMYQNHRVRVRAAIREEDTLPSISGVHPGAGWYEREIYDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GI F GH DLRR+LTDYGF GHPLRKDFP TG+ E+ YD+++K+VVY PV L+QE+R +
Sbjct: 121 FGILFTGHADLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEELKRVVYEPVSLVQEYRQF 180
Query: 180 DFLSPWEGVNSLFAKEDSKDDMS 202
DF+SPWEG + ++ DD +
Sbjct: 181 DFMSPWEGAQYVLPGDEKADDKA 203
>gi|296444796|ref|ZP_06886759.1| NADH (or F420H2) dehydrogenase, subunit C [Methylosinus
trichosporium OB3b]
gi|296257744|gb|EFH04808.1| NADH (or F420H2) dehydrogenase, subunit C [Methylosinus
trichosporium OB3b]
Length = 200
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/198 (49%), Positives = 134/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++E LG+ + + G V + GEL+++V+ + LRDDP FV+ ID+
Sbjct: 1 MSAELELLGEKVAAALPGIVTGLKIAYGELTIEVERSRWLDAARALRDDPELLFVSFIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
D+ R RFDVV H LSP+ N+R+R+K E V S+ +YPGADWFERE +D++
Sbjct: 61 TAADYPEREQRFDVVTHLLSPRRNQRIRIKTQTDEATPVTSLTSLYPGADWFERETYDLF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F+GHPDLRRI+TDYGF+GHPLRKDFP+TG+VE+ YDD+ K+VVY PV L QE+R +D
Sbjct: 121 GVIFDGHPDLRRIMTDYGFDGHPLRKDFPMTGYVEVRYDDERKRVVYEPVNLTQEYRKFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEGV ++
Sbjct: 181 FLSPWEGVQYDLPGDEKA 198
>gi|254504711|ref|ZP_05116862.1| putative NADH dehydrogenase, subunit C subfamily [Labrenzia
alexandrii DFL-11]
gi|222440782|gb|EEE47461.1| putative NADH dehydrogenase, subunit C subfamily [Labrenzia
alexandrii DFL-11]
Length = 201
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 106/198 (53%), Positives = 141/198 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L ++I S S+ GEL+L V+ D++ + +LRD+ C FVN+ D+
Sbjct: 1 MDETLKELAEHIELGLSESLVSWKVEYGELTLVVNASDILDVVRYLRDNASCKFVNLTDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ +R RFDVVYHFLSP N+R+RVK+ + V S+ ++PGA+WFERE +DMY
Sbjct: 61 CGVDYPAREKRFDVVYHFLSPFQNQRIRVKLETDDVTPVASLTSLFPGAEWFEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF+GHPLRKDFPVTGFVE+ YDD+ K+VVY PV L QE R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFDGHPLRKDFPVTGFVEVRYDDEKKRVVYEPVRLNQEMRTFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKA 198
>gi|75676077|ref|YP_318498.1| NADH dehydrogenase subunit C [Nitrobacter winogradskyi Nb-255]
gi|74420947|gb|ABA05146.1| NADH dehydrogenase subunit C [Nitrobacter winogradskyi Nb-255]
Length = 206
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/199 (51%), Positives = 136/199 (68%), Gaps = 1/199 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +++ LG IV + G+ S G+L++ V+ +V + FLRDD C FVN ID
Sbjct: 1 MDESRLDALGQMIVATLPGAATGHSVSFGQLTVTVEAAKIVEVARFLRDDRRCRFVNFID 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
VD+ R RFDVVYHFLSP N R+R++ +E VPS++ ++PGADWFERE +D+
Sbjct: 61 ATAVDYPGREKRFDVVYHFLSPTLNARIRLRAHASETTQVPSLIDVFPGADWFEREAYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F GHPD+RR+LTDYGF+GHPLRKDFP+TGFVE+ YDD K+VVY PV L QE R +
Sbjct: 121 YGVIFTGHPDMRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDAEKRVVYEPVRLNQEFRKF 180
Query: 180 DFLSPWEGVNSLFAKEDSK 198
DF+SPWEG + ++
Sbjct: 181 DFMSPWEGADYPLPGDEKA 199
>gi|15888599|ref|NP_354280.1| NADH dehydrogenase subunit C [Agrobacterium tumefaciens str. C58]
gi|218534249|sp|A9CJB1|NUOC_AGRT5 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|15156319|gb|AAK87065.1| NADH ubiquinone oxidoreductase chain C [Agrobacterium tumefaciens
str. C58]
Length = 200
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 114/199 (57%), Positives = 143/199 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + DL Y+ + V A + GEL+L+ ++++L +FLRDD C FVNIID+
Sbjct: 1 MSEALNDLAAYVKEARGSLVVSADIAYGELTLNTTPENVIALLTFLRDDVQCGFVNIIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSP+ N R+R+K+ VAE + VPS +Y GA+WFERE WDMY
Sbjct: 61 CGVDWPQREKRFDVVYHLLSPRQNLRVRIKLQVAEDEGVPSSTPVYMGAEWFEREAWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI FEGH DLRRILTDYGFEGHPLRKDFPVTGFVE+ YDD +K+V+Y PVEL QE R++D
Sbjct: 121 GIPFEGHKDLRRILTDYGFEGHPLRKDFPVTGFVEVRYDDVLKRVLYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + ++
Sbjct: 181 FLSPWEGTEYVLPGDEKAK 199
>gi|221638928|ref|YP_002525190.1| NADH dehydrogenase subunit C [Rhodobacter sphaeroides KD131]
gi|254767813|sp|B9KQW2|NUOC_RHOSK RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|221159709|gb|ACM00689.1| NADH-quinone oxidoreductase [Rhodobacter sphaeroides KD131]
Length = 200
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/198 (48%), Positives = 134/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L ++ ++ GEL+LDV +V L FLR D C F +++D+
Sbjct: 1 MPEALQELAAHVQMRQPDAILGHRVEFGELTLDVVPNRIVGLVEFLRSDASCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+D R RFDVVYHFLS N+R+R+K+ V E ++V SI ++P A+WFEREV+DM+
Sbjct: 61 TAIDHPERPARFDVVYHFLSMYQNQRIRLKMQVREDETVASIHSVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHP+RKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVRYDEVQKRVVYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + +D
Sbjct: 181 FLSPWEGADYILPGDDKA 198
>gi|298291845|ref|YP_003693784.1| NADH (or F420H2) dehydrogenase, subunit C [Starkeya novella DSM
506]
gi|296928356|gb|ADH89165.1| NADH (or F420H2) dehydrogenase, subunit C [Starkeya novella DSM
506]
Length = 204
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 106/198 (53%), Positives = 135/198 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG ++ + V V + GEL+L D + L +FLRDDP C FV+ ID+
Sbjct: 1 MDETLTELGAHVKEALPDVVEEVVVAYGELTLIADAAKVTGLLTFLRDDPSCKFVSFIDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSP N R+RVK+ E V S ++PGA WFERE +DMY
Sbjct: 61 CGVDWPKREKRFDVVYHLLSPTLNARIRVKVETDETTPVASATAVFPGAFWFEREAFDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHP+LRRILTDYGF+G+PLRKDFP TGFVE+ YDD+ K+VVY PV+L QE R++D
Sbjct: 121 GIMFSGHPELRRILTDYGFDGYPLRKDFPTTGFVEVRYDDERKRVVYEPVKLAQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + ++
Sbjct: 181 FLSPWEGPEYVLPGDEKA 198
>gi|325292634|ref|YP_004278498.1| NADH dehydrogenase I, C subunit [Agrobacterium sp. H13-3]
gi|325060487|gb|ADY64178.1| NADH dehydrogenase I, C subunit [Agrobacterium sp. H13-3]
Length = 200
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 115/199 (57%), Positives = 143/199 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + DL Y+ + V A + GEL+L+ +++L +FLRDD C FVNIID+
Sbjct: 1 MSEALNDLAAYVKEARGSLVVSADIAYGELTLNTTTESVIALLTFLRDDVQCGFVNIIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSP+ N R+R+K+ VAE + VPS +Y GADWFERE WDMY
Sbjct: 61 CGVDWPQREKRFDVVYHLLSPRQNLRVRIKLQVAEDEGVPSATSVYMGADWFEREAWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI FEGH DLRRILTDYGFEGHPLRKDFPVTGFVE+ YDD +K+V+Y PVEL QE R++D
Sbjct: 121 GIPFEGHADLRRILTDYGFEGHPLRKDFPVTGFVEVRYDDVLKRVLYEPVELKQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKAK 199
>gi|312116345|ref|YP_004013941.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodomicrobium vannielii
ATCC 17100]
gi|311221474|gb|ADP72842.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodomicrobium vannielii
ATCC 17100]
Length = 206
Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 137/197 (69%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+E L + + +F V ++GEL++ VD + ++ FLR DP F ++D+C
Sbjct: 4 TAKLEVLAEALKGAFPEGVTETRFALGELTVLVDRARIPAIAEFLRSDPAWRFTILVDIC 63
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ R+ RFDVVYHFLS N R+R+K VPS+VG++P A+WFERE +D+YG
Sbjct: 64 GVDYPERAERFDVVYHFLSMYQNLRVRLKTTADAATPVPSLVGVFPAANWFEREAYDLYG 123
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I FEGHPDLRRILTDYGF GHPLRKDFP+TGFVEL YD++ K+VVY PV+L QE R +DF
Sbjct: 124 ILFEGHPDLRRILTDYGFRGHPLRKDFPLTGFVELRYDEEQKRVVYEPVKLPQEFRSFDF 183
Query: 182 LSPWEGVNSLFAKEDSK 198
LSPWEG + L ++
Sbjct: 184 LSPWEGADYLLPGDEKA 200
>gi|77463072|ref|YP_352576.1| NADH dehydrogenase subunit C [Rhodobacter sphaeroides 2.4.1]
gi|126461944|ref|YP_001043058.1| NADH dehydrogenase subunit C [Rhodobacter sphaeroides ATCC 17029]
gi|123592236|sp|Q3J3F9|NUOC_RHOS4 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534328|sp|A3PIX0|NUOC_RHOS1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|77387490|gb|ABA78675.1| NADH dehydrogenase-ubiquinone oxidoreductase, chain C [Rhodobacter
sphaeroides 2.4.1]
gi|126103608|gb|ABN76286.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodobacter sphaeroides
ATCC 17029]
Length = 200
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 97/198 (48%), Positives = 134/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L ++ ++ GEL+LDV +V L FLR D C F +++D+
Sbjct: 1 MPEALQELAAHVRMRQPDAILGHRVEFGELTLDVVPNRIVGLVEFLRSDASCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+D R RFDVVYHFLS N+R+R+K+ V E ++V SI ++P A+WFEREV+DM+
Sbjct: 61 TAIDHPERPARFDVVYHFLSMYQNQRIRLKMQVREDETVASIHSVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHP+RKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVRYDEVQKRVVYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + +D
Sbjct: 181 FLSPWEGADYILPGDDKA 198
>gi|332557945|ref|ZP_08412267.1| NADH dehydrogenase subunit C [Rhodobacter sphaeroides WS8N]
gi|332275657|gb|EGJ20972.1| NADH dehydrogenase subunit C [Rhodobacter sphaeroides WS8N]
Length = 200
Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats.
Identities = 96/198 (48%), Positives = 134/198 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++L ++ ++ GEL+LDV +V L FLR D C F +++D+
Sbjct: 1 MPEALQELAAHVQMRQPDAILGHRVEFGELTLDVVPNRIVGLVEFLRSDASCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+D R RFD+VYHFLS N+R+R+K+ V E ++V SI ++P A+WFEREV+DM+
Sbjct: 61 TAIDHPERPARFDMVYHFLSMYQNQRIRLKMQVREDETVASIHSVHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF GHP+RKDFP TG+ E+ YD+ K+VVY PV+L+QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVRYDEVQKRVVYEPVKLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + +D
Sbjct: 181 FLSPWEGADYILPGDDKA 198
>gi|126740378|ref|ZP_01756066.1| NADH dehydrogenase subunit C [Roseobacter sp. SK209-2-6]
gi|126718514|gb|EBA15228.1| NADH dehydrogenase subunit C [Roseobacter sp. SK209-2-6]
Length = 203
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 96/203 (47%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 1 MVRKIED----LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M +++ LG I V S GEL++DV ++ FL+ D C F +
Sbjct: 1 MTESLQEPLRELGAQIEAKRPDCVLSWDVSFGELNVDVAPANIAEFVEFLKTDSSCKFSS 60
Query: 57 IIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREV 116
++D+ VD+ R+ RFDVVYHFLS N+R+R+++++ E VPSIV ++P A+WFEREV
Sbjct: 61 LVDVTAVDYPERAKRFDVVYHFLSMYRNQRIRLRVSIREDDMVPSIVDVHPSANWFEREV 120
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
+DM+GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+
Sbjct: 121 FDMFGILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAEKRVVYEPVNLVQEY 180
Query: 177 RDYDFLSPWEGVNSLFAKEDSKD 199
R +DF+SPWEG + ++ +
Sbjct: 181 RQFDFMSPWEGAEYILPGDEKGE 203
>gi|126727143|ref|ZP_01742980.1| NADH dehydrogenase subunit C [Rhodobacterales bacterium HTCC2150]
gi|126703571|gb|EBA02667.1| NADH dehydrogenase subunit C [Rhodobacterales bacterium HTCC2150]
Length = 201
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 93/198 (46%), Positives = 135/198 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++LG+ I S +V GEL +++ +V FL+ D +C F +++D+
Sbjct: 1 MSDALKELGELIALKQSDAVLNWSVERGELCVEITANSVVEFTEFLKTDRNCQFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+DF SR RFDVVYH LS N R+RV+ + E + +PSI+ ++P A+WFERE++DMY
Sbjct: 61 TAIDFPSRDKRFDVVYHHLSMYQNHRIRVRTQILEKEVMPSIISVHPSANWFEREIFDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGF G+PLRKDFP TG+ E+ YD++ K+VVY PV L+Q++R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEEQKRVVYEPVSLVQDYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKE 198
>gi|222148276|ref|YP_002549233.1| NADH dehydrogenase subunit C [Agrobacterium vitis S4]
gi|254767809|sp|B9JVE7|NUOC_AGRVS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|221735264|gb|ACM36227.1| NADH ubiquinone oxidoreductase chain C [Agrobacterium vitis S4]
Length = 200
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 110/198 (55%), Positives = 145/198 (73%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ L +I + G + + GEL++ ++ +L +FLRDD C F+NIID+
Sbjct: 1 MSEALQVLASHITENSGGLALSSTVAFGELTVTTTVENIYALVTFLRDDARCGFINIIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RF+VVYHFL+PK N+R+RVK++ +E K VPSI ++PGADWFERE WD+Y
Sbjct: 61 CGVDYPERVERFEVVYHFLAPKQNQRIRVKLSTSEDKPVPSICPLFPGADWFEREAWDLY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F GHPDLRR+LTDYGFEGHPLRKDFP+TGFVE+ YDD VK+VVY PVEL QE R +D
Sbjct: 121 GVMFTGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDDTVKRVVYEPVELKQEFRSFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKA 198
>gi|241518507|ref|YP_002979135.1| NADH (or F420H2) dehydrogenase, subunit C [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240862920|gb|ACS60584.1| NADH (or F420H2) dehydrogenase, subunit C [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 205
Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 107/198 (54%), Positives = 138/198 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+VN ++ +GEL+L ++ L FLR+D +C FV ++D+
Sbjct: 1 MSGNLPELASYLVNKVPQAISDHQFKLGELTLHTGREHIIELLGFLRNDENCRFVCLLDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R+ RFDVVYH LSP N RLRVK+ E +VPS ++P ADW+ERE WDMY
Sbjct: 61 CGVDWPGRAERFDVVYHLLSPTQNLRLRVKLETDEESAVPSACELFPCADWYEREAWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFP+TGFVE+ YDD K+V+Y PVEL QE+R +D
Sbjct: 121 GILFTGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYDDAAKRVIYEPVELKQEYRHFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKS 198
>gi|114764720|ref|ZP_01443905.1| NADH dehydrogenase subunit C [Pelagibaca bermudensis HTCC2601]
gi|114542920|gb|EAU45941.1| NADH dehydrogenase subunit C [Roseovarius sp. HTCC2601]
Length = 197
Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats.
Identities = 97/195 (49%), Positives = 134/195 (68%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++LG ++ V + EL++DV ++ FL+ DP C F ++D+ VD
Sbjct: 1 MKELGGHLEIRRPDCVLGWSVAFDELTVDVTPANIPGFVEFLKTDPSCRFSTLVDITAVD 60
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
R RFDVVYHFLS N+R+R+++AV E VPS+ G +P ADWFEREV+DM+GI F
Sbjct: 61 HPERPKRFDVVYHFLSMYQNQRIRLRVAVREDDVVPSVTGTHPSADWFEREVFDMFGIIF 120
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
GHPDLRRILTDYGF GHPLRKDFP TG+VE+ YD+++K+VVY PV L+QE+R +DF+SP
Sbjct: 121 SGHPDLRRILTDYGFRGHPLRKDFPTTGYVEVRYDEELKRVVYEPVSLVQEYRQFDFMSP 180
Query: 185 WEGVNSLFAKEDSKD 199
WEG + ++ +
Sbjct: 181 WEGAQYVLPGDEKAE 195
>gi|114569907|ref|YP_756587.1| NADH dehydrogenase subunit C [Maricaulis maris MCS10]
gi|122316123|sp|Q0APY8|NUOC_MARMM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|114340369|gb|ABI65649.1| NADH dehydrogenase subunit C [Maricaulis maris MCS10]
Length = 200
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 99/199 (49%), Positives = 145/199 (72%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ LG++I N+ +V + GEL++++ + ++ ++LRDDP C F +ID+
Sbjct: 1 MSEALKVLGEHIANAQDAAVTGWSIANGELTVEIHRDRIETVLTWLRDDPACRFTTLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R+ RF+VVYH LS N R+RVK++ E VP+++ +YP ADWFERE +DMY
Sbjct: 61 CGVDYPQRAERFEVVYHLLSMHQNHRIRVKLSTDEEAPVPTVIPVYPVADWFEREAFDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F HPDLRR+LTDYGFEG+PLRKDFP+TG+VE+ +D++ K+VVY PVEL+QE+RD+D
Sbjct: 121 GIVFADHPDLRRLLTDYGFEGYPLRKDFPLTGYVEVRWDEEEKRVVYEPVELVQEYRDFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAKYILPGDEKAE 199
>gi|170748476|ref|YP_001754736.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium
radiotolerans JCM 2831]
gi|218534300|sp|B1LUN5|NUOC_METRJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|170654998|gb|ACB24053.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacterium
radiotolerans JCM 2831]
Length = 215
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 99/189 (52%), Positives = 134/189 (70%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ +V + +V + GEL+L V D+V ++LRDDP C F N ID+CGVD+ R
Sbjct: 24 AERVVGALGPAVVSHAIAFGELTLVVQASDIVYALTYLRDDPACAFRNFIDICGVDYPQR 83
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
RFDVVYH LS ++N R+R+K+ E VPS++ ++P A+W+ERE +D+YGI F GHP
Sbjct: 84 EKRFDVVYHLLSLRHNLRIRLKVQTDEVTPVPSVIEVFPAANWYERETYDLYGILFSGHP 143
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGV 188
DLRR+LTDYGFEGHPLRKDFP+TGFVE+ YD +VVY PV+L QE R++DFLSPWEG
Sbjct: 144 DLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDQARVVYEPVQLTQEFRNFDFLSPWEGT 203
Query: 189 NSLFAKEDS 197
+ + ++
Sbjct: 204 DYVLPGDEK 212
>gi|92117742|ref|YP_577471.1| NADH dehydrogenase subunit C [Nitrobacter hamburgensis X14]
gi|91800636|gb|ABE63011.1| NADH dehydrogenase subunit C [Nitrobacter hamburgensis X14]
Length = 206
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 99/195 (50%), Positives = 135/195 (69%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+++ LG IV + G+ + G+LS+ V+ +V + F+RDD C FVNI D+ V
Sbjct: 5 RLDALGQMIVATLPGAAIGHSVAFGQLSITVEVAKIVEVARFIRDDQRCRFVNITDVTAV 64
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D+ R RFDVVY+FLSP N R+R+ +E VPS++ ++PGADWFERE +D+YG+
Sbjct: 65 DYPGREKRFDVVYNFLSPTLNTRIRLNAQASETTQVPSLIDVFPGADWFERETYDLYGVI 124
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F GHPD+RR+LTDYGF+GHPLRKDFP+TGFVE+ YDD K+VVY PV L QE R +DF+S
Sbjct: 125 FTGHPDMRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDAEKRVVYEPVRLNQEFRKFDFMS 184
Query: 184 PWEGVNSLFAKEDSK 198
PWEG + ++
Sbjct: 185 PWEGADYPLPGDEKA 199
>gi|83953912|ref|ZP_00962633.1| NADH-quinone oxidoreductase, C subunit [Sulfitobacter sp. NAS-14.1]
gi|83841857|gb|EAP81026.1| NADH-quinone oxidoreductase, C subunit [Sulfitobacter sp. NAS-14.1]
Length = 201
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/199 (47%), Positives = 134/199 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ +LG YI + + EL++DV +L L F++ D C F +++D+
Sbjct: 1 MSEQLNELGAYIEAKRPDCILGWDIAFDELNMDVTQANLPGLVEFIKSDATCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N+R+R+++ E VPSIV I+P A+WFEREV+DM+
Sbjct: 61 TAVDYPGRAKRFDVVYHFLSMYQNQRIRLRVVAREEDMVPSIVDIHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GIIFAGHPDLRRLLTDYGFRGYPLRKDFPTTGYTEVRYDETEKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGAEYILPGDEKPE 199
>gi|83942673|ref|ZP_00955134.1| NADH-quinone oxidoreductase, C subunit [Sulfitobacter sp. EE-36]
gi|83846766|gb|EAP84642.1| NADH-quinone oxidoreductase, C subunit [Sulfitobacter sp. EE-36]
Length = 201
Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/199 (48%), Positives = 135/199 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ +LG YI + + EL++DV +L L F++ D C F +++D+
Sbjct: 1 MSEQLNELGAYIEAKRPDCILGWDIAFDELNMDVTQANLPGLVEFIKSDATCRFSSLVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R+ RFDVVYHFLS N+R+R+++A E VPSIV I+P A+WFEREV+DM+
Sbjct: 61 TAVDYPGRAKRFDVVYHFLSMYQNQRIRLRVAAREEDMVPSIVDIHPSANWFEREVFDMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRR+LTDYGF G+PLRKDFP TG+ E+ YD+ K+VVY PV L+QE+R +D
Sbjct: 121 GIIFAGHPDLRRLLTDYGFRGYPLRKDFPTTGYTEVRYDETEKRVVYEPVSLVQEYRQFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG + ++ +
Sbjct: 181 FMSPWEGGEYILPGDEKPE 199
>gi|49475656|ref|YP_033697.1| NADH dehydrogenase subunit C [Bartonella henselae str. Houston-1]
gi|81827709|sp|Q6G390|NUOC_BARHE RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|49238463|emb|CAF27691.1| NADH dehydrogenase I, C subunit [Bartonella henselae str.
Houston-1]
Length = 202
Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 103/201 (51%), Positives = 132/201 (65%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E+L Y+ + + V + GEL++ + + F+RDD C F+NI D+
Sbjct: 1 MSESLEELAAYLKSKLGDKLEETVLAFGELTIVSRLDAITDVLIFVRDDSRCQFINITDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RFDV Y LSP++N RLRVK+ E V S IYPGA+W+ERE +DMY
Sbjct: 61 SGVDYPCRDKRFDVSYQLLSPRHNLRLRVKVRTDENIPVASACSIYPGAEWYERETYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++ K+V+Y PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
FLSPWEG + ++ D
Sbjct: 181 FLSPWEGAQYILPCDEKTKDK 201
>gi|27380028|ref|NP_771557.1| NADH dehydrogenase subunit C [Bradyrhizobium japonicum USDA 110]
gi|27353182|dbj|BAC50182.1| NADH ubiquinone oxidoreductase chain C [Bradyrhizobium japonicum
USDA 110]
Length = 203
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 138/195 (70%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
K++ LG IV++ G+ + +L++DV+ +V + +LRDDP+C FVN D+ V
Sbjct: 5 KLDALGQTIVSALPGAATGHSVAFNQLTVDVEAARIVEVVKYLRDDPNCRFVNFTDITAV 64
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D+ SR RFDVVYH +SP N R+R+K E VPS++ ++PGADWFERE +D+YG+F
Sbjct: 65 DYPSREKRFDVVYHLMSPTLNTRIRLKAQADETTQVPSLIDVFPGADWFEREAYDLYGVF 124
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F GHPD+RRILTDYGFEGHPLRKDFP TGFVE+ YDD+ K+VVY PV L QE R +DFLS
Sbjct: 125 FVGHPDMRRILTDYGFEGHPLRKDFPTTGFVEVRYDDQEKRVVYEPVRLNQEFRKFDFLS 184
Query: 184 PWEGVNSLFAKEDSK 198
PWEG + ++
Sbjct: 185 PWEGADYPLPGDEKA 199
>gi|144899467|emb|CAM76331.1| NADH dehydrogenase I, C subunit [Magnetospirillum gryphiswaldense
MSR-1]
Length = 200
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 140/199 (70%), Gaps = 3/199 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + ++DLGDYI + V + GEL++ V + + +FLRDD C F ++D
Sbjct: 1 MTQVLKDLGDYIAAALPNDVLSTEVNRVGELTVLVRTPSIAKVLTFLRDDSGCLFKQLVD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+CGVD+ R +RFDVVYH LS K+N+R+RVK+A E VPS+VG++ A WFERE WDM
Sbjct: 61 VCGVDWPGREDRFDVVYHLLSLKHNQRVRVKVATDEETPVPSVVGVFSSAGWFERETWDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+G+ F HPDLRR+LTDYGFEGHPLRKDFP+TG VEL YDD++K+ VY PV+L+Q+ R++
Sbjct: 121 FGVIFSDHPDLRRLLTDYGFEGHPLRKDFPLTGHVELRYDDELKRCVYEPVKLVQDFRNF 180
Query: 180 DFLSPWEGVNSLFAKEDSK 198
DFLSPWEG ++
Sbjct: 181 DFLSPWEGQG--LPGDEKA 197
>gi|299135031|ref|ZP_07028222.1| NADH (or F420H2) dehydrogenase, subunit C [Afipia sp. 1NLS2]
gi|298590008|gb|EFI50212.1| NADH (or F420H2) dehydrogenase, subunit C [Afipia sp. 1NLS2]
Length = 215
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 107/200 (53%), Positives = 140/200 (70%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ LG+ IV + G+ VGEL++ VD ++ + FL+ DP C FVNIID+
Sbjct: 4 ARLDALGETIVGALPGAALGHAVEVGELNISVDLSRIIEVARFLKTDPRCRFVNIIDVTA 63
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R NRFDVVYHF+SP N RLR++ E VPSI+ ++PG DWFERE +D+YG+
Sbjct: 64 VDYPGRENRFDVVYHFMSPTLNARLRLRGQANETTQVPSIISVFPGCDWFERETYDLYGV 123
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPD+RR+LTDYGFEGHPLRKDFP TGFVE+ YDD+ K+VVY PV L QE R +DFL
Sbjct: 124 IFTGHPDMRRLLTDYGFEGHPLRKDFPTTGFVEVRYDDQEKRVVYDPVRLNQEFRKFDFL 183
Query: 183 SPWEGVNSLFAKEDSKDDMS 202
SPWEG + L ++ +S
Sbjct: 184 SPWEGADYLLPGDEKASAVS 203
>gi|154253663|ref|YP_001414487.1| NADH dehydrogenase subunit C [Parvibaculum lavamentivorans DS-1]
gi|218534317|sp|A7HY47|NUOC_PARL1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|154157613|gb|ABS64830.1| NADH (or F420H2) dehydrogenase, subunit C [Parvibaculum
lavamentivorans DS-1]
Length = 200
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 97/199 (48%), Positives = 135/199 (67%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +LG++I+ + SV + GEL++ + + FLRDDP C F ++D+
Sbjct: 1 MDESLAELGEHILGTLEESVLGFHVAFGELNVLAQAQSIARVLKFLRDDPACRFGTLLDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ R RFDVVYH LS N+R+RV + E +VPS+V +YP A+W+ERE +DMY
Sbjct: 61 TAVDYPQRPERFDVVYHLLSMHQNQRIRVTVRTNEETAVPSVVAVYPSANWYERETFDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F HPDLRRILTDYGF G+PLRKDFP+TG+VE+ YDD K+VVY PV+L+QE R++D
Sbjct: 121 GVLFSDHPDLRRILTDYGFNGYPLRKDFPLTGYVEVRYDDDEKRVVYEPVKLVQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
F+SPWEG L ++ +
Sbjct: 181 FMSPWEGAEYLLPGDEKAE 199
>gi|115524528|ref|YP_781439.1| NADH dehydrogenase subunit C [Rhodopseudomonas palustris BisA53]
gi|115518475|gb|ABJ06459.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodopseudomonas
palustris BisA53]
Length = 201
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 104/201 (51%), Positives = 139/201 (69%), Gaps = 1/201 (0%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ LG IV + SG+V + GEL++ + +V + FLRDDP C F+N ID
Sbjct: 1 MDDNGLDALGQMIVGALSGAVIGHSIAFGELTVTIYAEKVVEVARFLRDDPRCRFINPID 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ R NRFDVVYH LSP N R+R++ E VPS++G++PG DWFERE +D+
Sbjct: 61 VTAVDYPGRENRFDVVYHLLSPTLNARIRLRAEANETTQVPSLIGVFPGVDWFEREAYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F GHPD+RRILTDYGF+GHPLRKDFP++GFVE+ YDD K+VVY PV L QE R +
Sbjct: 121 YGVIFTGHPDMRRILTDYGFDGHPLRKDFPLSGFVEVRYDDDEKRVVYEPVRLNQEFRKF 180
Query: 180 DFLSPWEGVNSLFAKEDSKDD 200
DFLSPWEG + ++ + +
Sbjct: 181 DFLSPWEGADYPLPGDEKRSE 201
>gi|85717028|ref|ZP_01047990.1| NADH dehydrogenase subunit C [Nitrobacter sp. Nb-311A]
gi|85696152|gb|EAQ34048.1| NADH dehydrogenase subunit C [Nitrobacter sp. Nb-311A]
Length = 206
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 101/201 (50%), Positives = 139/201 (69%), Gaps = 1/201 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +++ LG IV + G+ S G+L++ V+ +V + F+RDD C F+NIID
Sbjct: 1 MDESRLDALGQMIVATLPGAATGHSMSFGQLTVTVEAAKIVEVARFIRDDQRCRFINIID 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ R RFDV+YHFLSP N R+R++ +E VPS++ ++PGADWFERE +D+
Sbjct: 61 VTAVDYPGREKRFDVIYHFLSPALNARIRLRAYASETTQVPSLIDVFPGADWFEREAYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F GHPD+RR+LTDYGF+GHPLRKDFP+TGFVE+ YDD K+VVY PV L QE R +
Sbjct: 121 YGVIFTGHPDMRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDAEKRVVYEPVRLNQEFRKF 180
Query: 180 DFLSPWEGVNSLFAKEDSKDD 200
DF+SPWEG + ++ D
Sbjct: 181 DFMSPWEGADYPLPGDEKAMD 201
>gi|86749692|ref|YP_486188.1| NADH dehydrogenase subunit C [Rhodopseudomonas palustris HaA2]
gi|86572720|gb|ABD07277.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodopseudomonas
palustris HaA2]
Length = 204
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 138/200 (69%), Gaps = 2/200 (1%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ LG IV + G+ + G+L++ +D +V + FLRDDP C FVNI+D
Sbjct: 1 MDDNGLDTLGQTIVGALPGAAIGHSIAYGQLTVTIDAAKVVEVARFLRDDPRCRFVNIVD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ R RFD+VYHFLSP N R+R++ V E VPSI+ ++PG DWFEREV+D+
Sbjct: 61 VTAVDYPGRVPRFDLVYHFLSPALNARIRLRAEVGETTLVPSIIDVFPGTDWFEREVYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI GHPD+RRILTDYGF+GHPLRKDFP+TGFVE+ YDD K+VVY PV L QE R +
Sbjct: 121 YGIVITGHPDMRRILTDYGFDGHPLRKDFPLTGFVEVRYDDDQKRVVYEPVRLNQEFRKF 180
Query: 180 DFLSPWEGVNS-LFAKEDSK 198
DFLSPWEG + + ++
Sbjct: 181 DFLSPWEGADYPVLPGDEKA 200
>gi|146341113|ref|YP_001206161.1| NADH dehydrogenase subunit C [Bradyrhizobium sp. ORS278]
gi|146193919|emb|CAL77936.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
(NDH-1, chain C) [Bradyrhizobium sp. ORS278]
Length = 201
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 100/195 (51%), Positives = 135/195 (69%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+++ LG IV++ G+ + +L++ VD +V + LRDDP C F+N D+ V
Sbjct: 5 RLDALGQTIVSALPGAALGHSVAFNQLTVTVDPARIVEVVKHLRDDPGCRFINFTDITAV 64
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D+ R+ RF+VVYHFLSP N R+R+K E VPSI+ ++PGADWFERE +D+YG+
Sbjct: 65 DYPERAKRFEVVYHFLSPTLNTRIRLKAEADEMTQVPSIIDVFPGADWFEREAYDLYGVI 124
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F GHPD+RRILTDYGF+GHPLRKDFP TGFVE+ YDD+ K+V+Y PV L QE R +DFLS
Sbjct: 125 FVGHPDMRRILTDYGFDGHPLRKDFPTTGFVEVRYDDQEKRVIYEPVRLNQEFRRFDFLS 184
Query: 184 PWEGVNSLFAKEDSK 198
PWEG + ++
Sbjct: 185 PWEGADYPLPGDEKA 199
>gi|148255913|ref|YP_001240498.1| NADH dehydrogenase subunit C [Bradyrhizobium sp. BTAi1]
gi|146408086|gb|ABQ36592.1| NADH dehydrogenase subunit C [Bradyrhizobium sp. BTAi1]
Length = 201
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 100/195 (51%), Positives = 138/195 (70%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+++ LG IV++ G+ + +L++D++ +V + +LRDDP C FVNI D+ V
Sbjct: 5 RLDALGQTIVSALPGAALGHSVAFNQLTVDIEPTRIVEVAKYLRDDPACRFVNITDITAV 64
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D+ R+ RFDVVYHFLSP N R+R+K E VPS++ ++PGADWFERE +D+YG+
Sbjct: 65 DYPERAKRFDVVYHFLSPTLNARVRLKGQADEATQVPSLIDVFPGADWFEREAYDLYGVI 124
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F GHPD+RR+LTDYGF+GHPLRKDFP TGFVE+ YDD+ K+V+Y PV L QE R +DFLS
Sbjct: 125 FVGHPDMRRLLTDYGFDGHPLRKDFPTTGFVEVRYDDQEKRVIYEPVRLNQEFRKFDFLS 184
Query: 184 PWEGVNSLFAKEDSK 198
PWEG + ++
Sbjct: 185 PWEGADYPLPGDEKA 199
>gi|114799741|ref|YP_760448.1| NADH dehydrogenase subunit C [Hyphomonas neptunium ATCC 15444]
gi|123128796|sp|Q0C1E5|NUOC_HYPNA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|114739915|gb|ABI78040.1| NADH-quinone oxidoreductase, C subunit [Hyphomonas neptunium ATCC
15444]
Length = 202
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 103/199 (51%), Positives = 136/199 (68%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + DL +I +VR VGEL+L + +V L FLRDD C F ID+C
Sbjct: 3 TQALSDLAAHIEGRMPDAVRSWQIHVGELTLLAERDHIVPLLRFLRDDQQCNFETFIDVC 62
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ RS RF+VVYH LS + N R+RV+I E +VPS+V ++P A+WFERE +DMYG
Sbjct: 63 GVDYPERSERFEVVYHLLSMRMNHRIRVRIRTDEETAVPSVVSLWPAANWFEREAFDMYG 122
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F HPDLRRILTDYGFEG PLRKDFP+TG E+ YDD K+V+Y PV+L QE+R++DF
Sbjct: 123 IQFADHPDLRRILTDYGFEGWPLRKDFPLTGHYEVRYDDLEKRVIYEPVKLAQEYRNFDF 182
Query: 182 LSPWEGVNSLFAKEDSKDD 200
LSPWEG+ ++ ++ +
Sbjct: 183 LSPWEGMTTVIPGDEKAKE 201
>gi|209885053|ref|YP_002288910.1| NADH-quinone oxidoreductase subunit c [Oligotropha carboxidovorans
OM5]
gi|209873249|gb|ACI93045.1| NADH-quinone oxidoreductase subunit c [Oligotropha carboxidovorans
OM5]
Length = 216
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 110/200 (55%), Positives = 140/200 (70%), Gaps = 2/200 (1%)
Query: 1 MVR--KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M+ +++ LG IV + G+ VGEL++ VD +V + FL+ DP C FVNII
Sbjct: 1 MMDDARLDALGQTIVGALPGAALGHAVEVGELNIAVDLERIVEVVRFLKTDPRCRFVNII 60
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
D+ VD+ R NRFDVVYHF+SP N RLR++ E VPSI+ ++PGADWFERE +D
Sbjct: 61 DVTAVDYPGRENRFDVVYHFMSPTLNARLRLRGQANEDTQVPSIIRVFPGADWFERETYD 120
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
+YG+ F GHPD+RRILTDYGFEGHPLRKDFP+TGFVE+ YDD+ K+VVY PV L QE R
Sbjct: 121 LYGVIFTGHPDMRRILTDYGFEGHPLRKDFPLTGFVEVRYDDQEKRVVYDPVRLNQEFRQ 180
Query: 179 YDFLSPWEGVNSLFAKEDSK 198
+DFLSPWEG L ++
Sbjct: 181 FDFLSPWEGAEYLLPGDEKA 200
>gi|300023454|ref|YP_003756065.1| NADH (or F420H2) dehydrogenase, subunit C [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525275|gb|ADJ23744.1| NADH (or F420H2) dehydrogenase, subunit C [Hyphomicrobium
denitrificans ATCC 51888]
Length = 199
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 99/195 (50%), Positives = 138/195 (70%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+I +L ++ F + + + E S+ V +V + + LRDDP C F +ID+CGV
Sbjct: 2 EIANLITHVGTLFGADILASSTAFDEASISVPRDRIVEVLTKLRDDPKCQFEVLIDICGV 61
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D+ R+ RF+VVYH LSP+ N+RLR+KI+ E +V S+ ++P A+W+ERE +D+YGI
Sbjct: 62 DYPERAERFEVVYHLLSPRLNQRLRIKISTDETTAVQSVNDVFPAANWYEREAYDLYGIR 121
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F GHPDLRRILTDYGF+GHPLRKDFP+TG+VE+ YDD+ K+VVY PV+L QE RD+DF S
Sbjct: 122 FIGHPDLRRILTDYGFQGHPLRKDFPLTGYVEVRYDDEKKRVVYEPVKLTQEFRDFDFES 181
Query: 184 PWEGVNSLFAKEDSK 198
PWEG N + ++
Sbjct: 182 PWEGPNYIIPGDEKA 196
>gi|209964548|ref|YP_002297463.1| NADH dehydrogenase subunit C [Rhodospirillum centenum SW]
gi|209958014|gb|ACI98650.1| NADH-quinone oxidoreductase chain C [Rhodospirillum centenum SW]
Length = 236
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 103/201 (51%), Positives = 139/201 (69%), Gaps = 3/201 (1%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M + +++LGDYI ++ A + GEL + V+ +V + FLRDD C F ++
Sbjct: 1 MSDQALQELGDYITSALGKDALSAEVNRVGELVVRVERRSIVRVLQFLRDDSTCLFQQLM 60
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
+LCGVD+ RS RF+VVY LS K+N+R+RV + E VPS+ G++P A+WFERE WD
Sbjct: 61 ELCGVDYPQRSERFEVVYCLLSLKHNQRVRVVVTTDEDTPVPSVTGVFPVANWFEREAWD 120
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
+YGIFF HPDLRRILTDYGFEGHPLRKDFP+TG+VEL YD ++VVY PV+L Q+ R
Sbjct: 121 LYGIFFSDHPDLRRILTDYGFEGHPLRKDFPLTGYVELRYDPDQRRVVYEPVKLTQDFRS 180
Query: 179 YDFLSPWEGVNSL-FAKEDSK 198
+DFLSPWEG+ + ++
Sbjct: 181 FDFLSPWEGMTEVQLPGDEKA 201
>gi|110633378|ref|YP_673586.1| NADH dehydrogenase subunit C [Mesorhizobium sp. BNC1]
gi|123353796|sp|Q11JK4|NUOC_MESSB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|110284362|gb|ABG62421.1| NADH dehydrogenase subunit C [Chelativorans sp. BNC1]
Length = 200
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 100/199 (50%), Positives = 143/199 (71%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + DL YI G V+ + + EL++ V+ GD+V + +FL+ D C F +D+
Sbjct: 1 MNEALRDLAGYIKEKLDGRVQDWMVAYDELTIFVEPGDIVDVLTFLKSDVQCQFFAFVDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ +R RF+VVYH LSP+ N+R+RVK++ E +PS++ ++P A+W+ERE++D+Y
Sbjct: 61 SGVDYPARERRFEVVYHLLSPRQNQRIRVKVSTDEETPIPSVIEVFPAANWYEREIYDLY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+ F HPDLRRILTDYGFEGHPLRKDFP+TGFVE+HYDD+ K+VVY+PV L QE R++D
Sbjct: 121 GVLFTEHPDLRRILTDYGFEGHPLRKDFPLTGFVEVHYDDEAKRVVYQPVNLRQEFRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + ++
Sbjct: 181 FLSPWEGTDYVLPGDEKAK 199
>gi|304322206|ref|YP_003855849.1| NADH dehydrogenase subunit C [Parvularcula bermudensis HTCC2503]
gi|303301108|gb|ADM10707.1| NADH dehydrogenase subunit C [Parvularcula bermudensis HTCC2503]
Length = 200
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 136/198 (68%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + +L D+I ++ + GELS+ V G +V FLRDDP C FV +IDLC
Sbjct: 3 MDDLIELKDHIAAWGGEAIIAQEVAFGELSVTVAAGKIVDTLKFLRDDPICRFVQLIDLC 62
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ R RF+VVYH LS N R+R+K+ V + S PS+ I+P ADW+ERE +DMYG
Sbjct: 63 GVDYPERRKRFEVVYHLLSLHNNTRIRIKVPVGQSDSCPSVRSIFPNADWYEREAFDMYG 122
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F+GHPDLRRILTDYGFEG+PLRKDFP+TGF E+ +DD+ +VVY PVEL QE R++D
Sbjct: 123 IVFDGHPDLRRILTDYGFEGYPLRKDFPLTGFTEVRWDDEQSRVVYEPVELAQEFRNFDT 182
Query: 182 LSPWEGVNSLFAKEDSKD 199
LSPW G + + ++ D
Sbjct: 183 LSPWRGSDYVLPGDEKAD 200
>gi|16126197|ref|NP_420761.1| NADH dehydrogenase subunit C [Caulobacter crescentus CB15]
gi|221234968|ref|YP_002517404.1| NADH dehydrogenase subunit C [Caulobacter crescentus NA1000]
gi|81782638|sp|Q9A6X2|NUOC_CAUCR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|13423413|gb|AAK23929.1| NADH dehydrogenase I, C subunit [Caulobacter crescentus CB15]
gi|220964140|gb|ACL95496.1| NADH-quinone oxidoreductase chain C [Caulobacter crescentus NA1000]
Length = 197
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 133/198 (67%), Gaps = 2/198 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E LG IV G V + GEL++ ++ +FLRDD C F +IDL
Sbjct: 1 MSEALELLGQDIVARAPG-VLGHSVAFGELTIVARAASVIDTLTFLRDDAACRFHQLIDL 59
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R+ RFDVVYH LS N R+R+K++ E VPS+ ++P ADWFERE +DMY
Sbjct: 60 TGVDYPERAARFDVVYHLLSLVKNHRIRLKVSTDEDTPVPSVTPVFPVADWFEREAFDMY 119
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GIFF+GHPDLRRILTDYGF GHPLRKDFP+TG+VE+ YDD++K+VVY PV++ E R +D
Sbjct: 120 GIFFDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRYDDELKRVVYEPVKIT-EFRAFD 178
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG ++
Sbjct: 179 FLSPWEGAKYALPGDEKA 196
>gi|254455280|ref|ZP_05068709.1| NADH dehydrogenase i chain c [Candidatus Pelagibacter sp. HTCC7211]
gi|207082282|gb|EDZ59708.1| NADH dehydrogenase i chain c [Candidatus Pelagibacter sp. HTCC7211]
Length = 201
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 128/201 (63%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ +EDL I + + + +L ++ D DL+ + F++ + F +ID+
Sbjct: 1 MINLEDLEKKINSELTTKINSTEIKHNQLYIETDKDDLIDVTLFIKTNQDTKFRQLIDIT 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ + RF +VY FLS +YN+R+ + ++ E + +PS+ I+P ++W EREV+DMYG
Sbjct: 61 VVDYPENTQRFKMVYLFLSHEYNQRIILSYSINENEIIPSLTSIFPASNWMEREVFDMYG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ F+ HPDLRRILTDYGFEGHPLRKDFP+TG E+ Y + KKV+ PV+L Q +R++D+
Sbjct: 121 VSFKDHPDLRRILTDYGFEGHPLRKDFPLTGHTEVRYSEDQKKVINEPVKLEQNYRNFDY 180
Query: 182 LSPWEGVNSLFAKEDSKDDMS 202
SPWEG + + DS D +
Sbjct: 181 ESPWEGTKYIKEELDSNDKKN 201
>gi|90417842|ref|ZP_01225754.1| NADH dehydrogenase I, C subunit [Aurantimonas manganoxydans
SI85-9A1]
gi|90337514|gb|EAS51165.1| NADH dehydrogenase I, C subunit [Aurantimonas manganoxydans
SI85-9A1]
Length = 202
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 144/194 (74%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+DL DY+V + ++ + + GEL+L V ++V + +FLRDDP F++++D+CGVD+
Sbjct: 8 KDLTDYVVETLGDTLIETITAFGELTLIVAPAEIVRVLTFLRDDPQTQFISLVDICGVDY 67
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
R+ RF+VVYH LSP+ N+R+R+K+ E VPS+ G++ GADWFERE +D YGI F
Sbjct: 68 PERAERFEVVYHLLSPRQNQRVRIKVRTGEDLPVPSVTGVFAGADWFEREAYDFYGILFT 127
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
GHPDLRRILTDYGFEG+PLRKDFP+TGFVE+HYD+ K+VVY PVEL QE R++DFLSPW
Sbjct: 128 GHPDLRRILTDYGFEGYPLRKDFPLTGFVEVHYDEAKKQVVYEPVELRQEFRNFDFLSPW 187
Query: 186 EGVNSLFAKEDSKD 199
EG + ++
Sbjct: 188 EGTEYVLPGDEKAK 201
>gi|295689627|ref|YP_003593320.1| NADH (or F420H2) dehydrogenase subunit C [Caulobacter segnis ATCC
21756]
gi|295431530|gb|ADG10702.1| NADH (or F420H2) dehydrogenase, subunit C [Caulobacter segnis ATCC
21756]
Length = 213
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 98/198 (49%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E LG IV + +G++ + GEL++ ++ FLRD P C F ++DL VD
Sbjct: 14 LETLGQAIVANSAGAITAYHVAFGELTVLGPANRVIQALEFLRDHPDCRFHQLVDLTAVD 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ R RFDVVYH LS N R+R+K+ E +VPS+ ++ ADWFERE +DMYG+FF
Sbjct: 74 YPQRERRFDVVYHLLSLVKNHRIRLKVQTDEDTAVPSVTPVFAVADWFEREAFDMYGVFF 133
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
EGHPDLRRILTDYGF GHPLRKDFP+TG+VE+ YDD++K+VVY PV++ E R +DFLSP
Sbjct: 134 EGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRYDDELKRVVYEPVKIT-EFRAFDFLSP 192
Query: 185 WEGVNSLFAKEDSKDDMS 202
WEG ++ + +
Sbjct: 193 WEGAKYALPGDEKAEKRA 210
>gi|84686429|ref|ZP_01014323.1| NADH dehydrogenase subunit C [Maritimibacter alkaliphilus HTCC2654]
gi|84665612|gb|EAQ12088.1| NADH dehydrogenase subunit C [Rhodobacterales bacterium HTCC2654]
Length = 204
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 100/197 (50%), Positives = 129/197 (65%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ +LG I V + GEL++ V L+ FL+ D C ++D+
Sbjct: 4 DALNELGALIEVKQMDVVVGWEVAFGELTVTVRPEALIGFVEFLKTDRGCRLSTLVDITA 63
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R RFDVVYHFLS N R+RVK AV E + VPSIV +YP A+WFERE++DM+GI
Sbjct: 64 VDYPEREARFDVVYHFLSMYQNHRIRVKAAVEEREMVPSIVTVYPAANWFEREIFDMFGI 123
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F+GHPDLRRILTDYGF GHPLRKDFP TGF E+ YD+ K+VVY PV L+QE+R +DF+
Sbjct: 124 IFKGHPDLRRILTDYGFRGHPLRKDFPTTGFTEVRYDEVEKRVVYEPVSLVQEYRQFDFM 183
Query: 183 SPWEGVNSLFAKEDSKD 199
SPWEG + ++ D
Sbjct: 184 SPWEGAEYVLPGDEKAD 200
>gi|217979051|ref|YP_002363198.1| NADH (or F420H2) dehydrogenase, subunit C [Methylocella silvestris
BL2]
gi|217504427|gb|ACK51836.1| NADH (or F420H2) dehydrogenase, subunit C [Methylocella silvestris
BL2]
Length = 204
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 104/200 (52%), Positives = 140/200 (70%), Gaps = 1/200 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ + + + G V A + GEL+L V LV +FLRDDP C FV IDL
Sbjct: 1 MDEDLKQFVETLSAALRGWVEDASLAYGELTLTVRADCLVETVAFLRDDPSCLFVCFIDL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ +R RFDVV H LSPK+NRR+RVK+ E V S+ G++P A+WFERE +D++
Sbjct: 61 TAVDYPTREKRFDVVTHLLSPKHNRRIRVKVEADEQTPVASLSGLFPAANWFEREAYDLF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G++F GHPDLRR+LTDYGF+GHPLRKDFP+TG+VE+ YDD+ K+V+Y PV LMQE R++D
Sbjct: 121 GVYFSGHPDLRRLLTDYGFDGHPLRKDFPMTGYVEVRYDDEEKRVLYEPVALMQEFRNFD 180
Query: 181 FLSPWEG-VNSLFAKEDSKD 199
FLSPWEG V+ + ++
Sbjct: 181 FLSPWEGAVDYVLPGDEKAK 200
>gi|121602302|ref|YP_989072.1| NADH dehydrogenase subunit C [Bartonella bacilliformis KC583]
gi|218534252|sp|A1USW9|NUOC_BARBK RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|120614479|gb|ABM45080.1| NADH dehydrogenase (quinone), C subunit [Bartonella bacilliformis
KC583]
Length = 205
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 100/198 (50%), Positives = 131/198 (66%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ +L Y+ + + + GEL++ ++ + F+RDD C F+NIID+
Sbjct: 3 TETLVELAAYLKEKLGDKLEESALAFGELTIVSRLDAIIDVLMFIRDDSRCQFINIIDIS 62
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ +R RFDV Y LSP N RLRVK+ E VPS+ +YPGA+W+ERE +DMYG
Sbjct: 63 GVDYPARDKRFDVSYQLLSPFQNLRLRVKVRTDEDVPVPSVCSVYPGAEWYERETYDMYG 122
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++ K+V+Y PV L QE R++DF
Sbjct: 123 ILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFDF 182
Query: 182 LSPWEGVNSLFAKEDSKD 199
LSPWEG + + +
Sbjct: 183 LSPWEGADYVLPCDKKAK 200
>gi|288958987|ref|YP_003449328.1| NADH dehydrogenase I chain C [Azospirillum sp. B510]
gi|288911295|dbj|BAI72784.1| NADH dehydrogenase I chain C [Azospirillum sp. B510]
Length = 209
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 2/200 (1%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + +++LGD I G V +GEL + V ++++ + LRDDP F + D
Sbjct: 1 MSEQALKELGDVIAAKIGGDVLKVEVRLGELMVTVKRPAILAVLTTLRDDPATRFEQLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ R+ RF+VVY LS +NRR+RVK+A E VPS V ++ A+WFEREVWD+
Sbjct: 61 ITAVDYPDRAERFEVVYQLLSYSHNRRMRVKLATDEDTPVPSAVSVFSAANWFEREVWDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GIFFE HPDLRRILTDYGFEGHP RKDFP+TG+VE YD+ K+VVY PV L Q+ R +
Sbjct: 121 FGIFFENHPDLRRILTDYGFEGHPFRKDFPLTGYVEARYDEDQKRVVYEPVRLTQDFRAF 180
Query: 180 DFLSPWEGVNSL-FAKEDSK 198
DFLSPWEG+ ++ ++
Sbjct: 181 DFLSPWEGMTNVMLPGDEKA 200
>gi|71083584|ref|YP_266303.1| NADH dehydrogenase I subunit C [Candidatus Pelagibacter ubique
HTCC1062]
gi|91761995|ref|ZP_01263960.1| NADH Dehydrogenase I Chain C [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062697|gb|AAZ21700.1| NADH Dehydrogenase I Chain C [Candidatus Pelagibacter ubique
HTCC1062]
gi|91717797|gb|EAS84447.1| NADH Dehydrogenase I Chain C [Candidatus Pelagibacter ubique
HTCC1002]
Length = 202
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 131/200 (65%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + DL I + + ++ +L +++D DL+ + F++ + + F +ID+
Sbjct: 1 MQNLIDLEKKINSELTTKIKKTEIRHEQLYINIDNEDLIDVTLFIKSNENTKFRQLIDIT 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ + RF VVY FLS ++N+R+ + ++E + +PS+ IYP A+W EREV+DMYG
Sbjct: 61 VVDYPENAQRFKVVYLFLSHEFNQRIILSYLISENEVIPSLTPIYPAANWMEREVFDMYG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ F+ HPD+RRILTDYGFEGHPLRKDFP+TG E+ Y + KKV+ PV+L Q +R++D+
Sbjct: 121 VKFKDHPDMRRILTDYGFEGHPLRKDFPLTGHTEVRYSEDQKKVISEPVKLEQNYRNFDY 180
Query: 182 LSPWEGVNSLFAKEDSKDDM 201
SPWEG + + D ++D
Sbjct: 181 ESPWEGTKYIKDQTDLENDK 200
>gi|91977355|ref|YP_570014.1| NADH dehydrogenase subunit C [Rhodopseudomonas palustris BisB5]
gi|91683811|gb|ABE40113.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodopseudomonas
palustris BisB5]
Length = 204
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 103/200 (51%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ LG IV + G+ V + EL++ +D +V + FLRDDP C F+NI+D
Sbjct: 1 MDDNGLDTLGQTIVGALPGAAIGHVVTYSELTVTIDSTKVVDVVRFLRDDPRCRFINIVD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ R RFD+VYHFLSP N R+R++ V E VPSI+ ++PG DWFEREV+D+
Sbjct: 61 VTAVDYPGRVPRFDLVYHFLSPTLNARIRLRAEVGETTLVPSIISVFPGTDWFEREVYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI GHPD+RR+LTDYGF+GHPLRKDFP+TGFVE+ YDD K+VVY PV L QE R +
Sbjct: 121 YGIIITGHPDMRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDDQKRVVYEPVRLNQEFRKF 180
Query: 180 DFLSPWEGVNS-LFAKEDSK 198
DF SPWEG + + ++
Sbjct: 181 DFQSPWEGADYPILPGDEKA 200
>gi|170084847|ref|XP_001873647.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651199|gb|EDR15439.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 273
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 95/198 (47%), Positives = 122/198 (61%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI V+ EL++ ++ + +FLRD C F +D+
Sbjct: 62 TEALHTYGSYITQCLPKFVQQFSVLKDELTIYTAPSGIIPVLTFLRDHSQCQFKACMDIS 121
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVDF R RF+VVY LS K R+RVK E VPS V +Y GADW+ERE WD+YG
Sbjct: 122 GVDFPEREKRFEVVYSLLSVKLGGRIRVKTYAGEADPVPSAVEVYRGADWYEREAWDLYG 181
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFFEGHPDLRRILTDYGFEGHPLRKDFP+TG+ E+ YD++ K+VVY P++L Q R+++
Sbjct: 182 IFFEGHPDLRRILTDYGFEGHPLRKDFPLTGYTEVRYDEERKRVVYEPLQLTQAFRNFEA 241
Query: 182 LSPWEGVNSLFAKEDSKD 199
LSPWE V +D
Sbjct: 242 LSPWEQVGEGTKGRRPED 259
>gi|329850727|ref|ZP_08265572.1| NADH-quinone oxidoreductase subunit C [Asticcacaulis biprosthecum
C19]
gi|328841042|gb|EGF90613.1| NADH-quinone oxidoreductase subunit C [Asticcacaulis biprosthecum
C19]
Length = 200
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 99/200 (49%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Query: 1 MV-RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M K++ L + F ++ + GEL+L V +V + S L+ +P F +ID
Sbjct: 1 MSNEKLQTLAERAQAEFKEAILETKFAFGELTLTVSRERIVEILSKLKQEP-YRFHQLID 59
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
LCG D+ R+ RFDVVYH LS +N RLRVK+ E VPS+ +YP ADW+ERE +DM
Sbjct: 60 LCGADYPKRAERFDVVYHLLSLNHNVRLRVKVTTDEIVPVPSVRSVYPNADWYEREAFDM 119
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F GHPDLRR+LTDYGF G+PLRKDFP+TG VE+ YD++ K+VVY PV+L QE+R +
Sbjct: 120 YGMLFSGHPDLRRLLTDYGFSGYPLRKDFPMTGHVEVRYDEEQKRVVYEPVKLTQEYRKF 179
Query: 180 DFLSPWEGVNSLFAKEDSKD 199
DFLSPWEG + + +D
Sbjct: 180 DFLSPWEGASYVLPGDDKAK 199
>gi|167646796|ref|YP_001684459.1| NADH dehydrogenase subunit C [Caulobacter sp. K31]
gi|218534261|sp|B0SZ50|NUOC_CAUSK RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|167349226|gb|ABZ71961.1| NADH (or F420H2) dehydrogenase, subunit C [Caulobacter sp. K31]
Length = 214
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 100/198 (50%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E LG IV + +G++ + GEL+L +V ++LRD P F ++DL GVD
Sbjct: 15 LEALGQAIVANSAGAITAWSVAFGELNLLGPANRIVQALTYLRDHPDYRFHQLVDLTGVD 74
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ R RFDVVYH LS N R+R+K+ E +VPS+ ++P ADWFERE +DMYGIFF
Sbjct: 75 YPERERRFDVVYHLLSLIKNHRVRLKVQTDEDTAVPSVTPVFPVADWFEREAFDMYGIFF 134
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
+GHPDLRRILTDYGF GHPLRKDFP+TG+VE+ YDD++K+VVY PV++ E R +DFLSP
Sbjct: 135 DGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRYDDELKRVVYEPVKIT-EFRAFDFLSP 193
Query: 185 WEGVNSLFAKEDSKDDMS 202
WEG ++ + +
Sbjct: 194 WEGAKYALPGDEKAEKRA 211
>gi|49474179|ref|YP_032221.1| NADH dehydrogenase subunit C [Bartonella quintana str. Toulouse]
gi|81827625|sp|Q6FZY9|NUOC_BARQU RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|49239683|emb|CAF26058.1| NADH dehydrogenase I, C subunit [Bartonella quintana str. Toulouse]
Length = 202
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 99/199 (49%), Positives = 131/199 (65%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ N + + + GEL++ + + F+RDD C F+N+ D+
Sbjct: 1 MNESLVELSAYLKNKLGDKLEETILAFGELTIVSRLDAITGVLMFVRDDSRCQFINLTDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y L+P++N RLR+K+ E V S IYPGA+W+ERE +DMY
Sbjct: 61 SGVDYPSRDKRFDVSYQLLAPRHNLRLRIKVRTDENTPVASACSIYPGAEWYEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++ K+V+Y PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKD 199
FLSPWEG + + +
Sbjct: 181 FLSPWEGAQYVLPCNEKAE 199
>gi|71006324|ref|XP_757828.1| hypothetical protein UM01681.1 [Ustilago maydis 521]
gi|46097031|gb|EAK82264.1| hypothetical protein UM01681.1 [Ustilago maydis 521]
Length = 389
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 91/186 (48%), Positives = 121/186 (65%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ D G YI + ++ EL+L V ++ SFLRD F +D+ G D
Sbjct: 182 LHDFGSYITSCLPRFIQQFSVVKDELTLYVAPDAVIPTLSFLRDHTQTQFRACMDISGAD 241
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ +RS RF+VVYH LS +YN R+RVK E VPS ++ ADW+ERE+WDMYG+FF
Sbjct: 242 YPTRSQRFEVVYHLLSVQYNARIRVKTYADEVHPVPSATAVFRSADWYEREIWDMYGVFF 301
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
GHPDLRRILTDYGFEGHPLRKDFP+TG+ E+ YD++ K+VV P++L Q R+++ SP
Sbjct: 302 IGHPDLRRILTDYGFEGHPLRKDFPLTGYTEVRYDEEKKRVVSEPLQLTQAFRNFEANSP 361
Query: 185 WEGVNS 190
WE V
Sbjct: 362 WEQVGE 367
>gi|299755128|ref|XP_001828448.2| NADH-ubiquinone oxidoreductase kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|298411082|gb|EAU93440.2| NADH-ubiquinone oxidoreductase kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 275
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 94/197 (47%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ G Y+ ++ EL+L + +V + +FLRD C F ++D+ GVD
Sbjct: 68 LHTYGSYLTQCLPKFIQQFSVLKDELTLYIAPSAVVPVLTFLRDHTQCQFKAVMDISGVD 127
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
F R RF+VVYH LS ++ R+RVK E VPS V ++ GADW+ERE WDMYGI+F
Sbjct: 128 FPEREKRFEVVYHLLSIRHAGRIRVKTYAGEADPVPSAVEVFRGADWYEREAWDMYGIYF 187
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
E HPDLRRILTDYGFEGHPLRKDFP+TG+ EL YD++ K+VVY P++L Q R+++ LSP
Sbjct: 188 ENHPDLRRILTDYGFEGHPLRKDFPLTGYTELRYDEEKKRVVYEPLQLTQAFRNFESLSP 247
Query: 185 WE----GVNSLFAKEDS 197
WE G +E
Sbjct: 248 WEQIGDGTKGRRPEELK 264
>gi|254294102|ref|YP_003060125.1| NADH dehydrogenase subunit C [Hirschia baltica ATCC 49814]
gi|254042633|gb|ACT59428.1| NADH (or F420H2) dehydrogenase, subunit C [Hirschia baltica ATCC
49814]
Length = 209
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 98/197 (49%), Positives = 135/197 (68%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++L +I SV+ EL + ++SL FLR D C F + DLC
Sbjct: 9 ETLDELVSHIETEQPHSVKSCAVVNDELVVYAVRDQIMSLMRFLRSDSQCRFETLTDLCA 68
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R+ RF+VVYH LS N+R+RVK++ E VPS+V ++P A+W ERE +DMYG+
Sbjct: 69 VDYPERAERFEVVYHMLSMSLNQRIRVKVSTDEESPVPSLVELFPCANWNEREAFDMYGV 128
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPDLRRILTDYGFEGHPLRKDFP+TG VE+ YD+ K+VVY+PV+L+QE+R++DF+
Sbjct: 129 LFSGHPDLRRILTDYGFEGHPLRKDFPLTGHVEVRYDEVEKRVVYQPVKLVQEYRNFDFM 188
Query: 183 SPWEGVNSLFAKEDSKD 199
SPWEG+ S+ ++ D
Sbjct: 189 SPWEGMQSVLPGDEKAD 205
>gi|240850585|ref|YP_002971985.1| NADH dehydrogenase I subunit C [Bartonella grahamii as4aup]
gi|240267708|gb|ACS51296.1| NADH dehydrogenase I subunit C [Bartonella grahamii as4aup]
Length = 201
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 101/201 (50%), Positives = 132/201 (65%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + +L Y+ N + V + GEL++ ++ + F+RDD C F+N+ D+
Sbjct: 1 MDKTLVELAAYLENKLKNKLEETVIAFGELTIVARLDAIIDVLMFVRDDSRCQFINLTDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y LSP+ N RLRVK+ E V S +YPGA+W+ERE +DMY
Sbjct: 61 SGVDYPSRDKRFDVSYQLLSPRENLRLRVKVRTDENTPVASACTVYPGAEWYERETYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEG+PLRKDFPVTGFVE YD++ K+V+Y PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGYPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
FLSPWEG + D+
Sbjct: 181 FLSPWEGGQYTLPCDGKADEK 201
>gi|319408581|emb|CBI82236.1| NADH dehydrogenase I chain C [Bartonella schoenbuchensis R1]
Length = 202
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 136/200 (68%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ N + +V + GEL++ + + F+RDD C FVNI D+
Sbjct: 1 MFESLNELSAYLKNQLGDKLEESVLAFGELTIVSRLDAITDVLMFVRDDSRCQFVNITDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y LSP++N RLRVK+ E +PS +YPGA+W+ERE +DMY
Sbjct: 61 SGVDYPSRDKRFDVSYQLLSPRHNLRLRVKVRTDENVPIPSACSVYPGAEWYERETYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++VK+V+Y PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEVKRVIYEPVVLRQEMRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
FLSPWEG + ++ +D
Sbjct: 181 FLSPWEGAEYILPGDEEIND 200
>gi|316933893|ref|YP_004108875.1| NADH (or F420H2) dehydrogenase subunit C [Rhodopseudomonas
palustris DX-1]
gi|315601607|gb|ADU44142.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodopseudomonas
palustris DX-1]
Length = 204
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 104/204 (50%), Positives = 138/204 (67%), Gaps = 2/204 (0%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ LG IV + G + G+L+L VD G +V + LRDDP F++ ID
Sbjct: 1 MDDNGLDTLGQTIVGALPGIATGHFVAFGQLTLTVDAGKIVEVMRLLRDDPRFRFISFID 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ R++RF++VYH LSPK N R+RVK V E VPSI+ ++PGADWFERE +D+
Sbjct: 61 MTAVDYPGRADRFEIVYHLLSPKLNERVRVKAEVGETTLVPSIIDVFPGADWFEREAYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI GHPD+RR+LTDYGF+GHPLRKDFP++GFVE+ YDD K+VVY PV L QE R +
Sbjct: 121 YGIIITGHPDMRRLLTDYGFDGHPLRKDFPLSGFVEVRYDDDQKRVVYEPVRLNQEFRKF 180
Query: 180 DFLSPWEGVNS-LFAKEDSKDDMS 202
DFLSPWEG + + ++ S
Sbjct: 181 DFLSPWEGADYPVLPGDEKAGVKS 204
>gi|39936015|ref|NP_948291.1| NADH dehydrogenase subunit C [Rhodopseudomonas palustris CGA009]
gi|192291670|ref|YP_001992275.1| NADH dehydrogenase subunit C [Rhodopseudomonas palustris TIE-1]
gi|81562350|sp|Q6N5M4|NUOC_RHOPA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534314|sp|B3Q7N4|NUOC_RHOPT RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|39649869|emb|CAE28391.1| NADH-ubiquinone dehydrogenase chain C [Rhodopseudomonas palustris
CGA009]
gi|192285419|gb|ACF01800.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodopseudomonas
palustris TIE-1]
Length = 204
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 104/204 (50%), Positives = 136/204 (66%), Gaps = 2/204 (0%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ LG IV + G G+L+L VD G +V + LRDDP F++ ID
Sbjct: 1 MDDNGLDTLGQTIVGALPGIATGHSVGFGQLTLTVDAGKIVEVMRLLRDDPRFRFISFID 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ R+ RF++VYH LSPK N R+RVK V E VPSI+ ++PGADWFERE +D+
Sbjct: 61 MTAVDYPGRAERFEIVYHLLSPKLNERVRVKAEVGETTLVPSIIEVFPGADWFEREAYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI GHPD+RR+LTDYGF+GHPLRKDFP+TGFVE+ YDD K+V+Y PV L QE R +
Sbjct: 121 YGIVITGHPDMRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDDQKRVIYEPVRLNQEFRKF 180
Query: 180 DFLSPWEGVNS-LFAKEDSKDDMS 202
DFLSPWEG + + ++ S
Sbjct: 181 DFLSPWEGADYPVLPGDEKAGVKS 204
>gi|182679351|ref|YP_001833497.1| NADH (or F420H2) dehydrogenase, subunit C [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182635234|gb|ACB96008.1| NADH (or F420H2) dehydrogenase, subunit C [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 212
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 99/196 (50%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ G+ I + G+++ A + GEL+L V+ G L+ ++LRDDP +V+ IDL
Sbjct: 11 QELTRQGEAIGAALPGAIKAATVAFGELTLTVEAGRLIETITYLRDDPSALYVSFIDLTA 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R RFDVV H LSPK+NRR+R+K+ E VPS+ YP A+WFERE +D +G+
Sbjct: 71 VDYPLRERRFDVVTHLLSPKHNRRIRIKVETDENTPVPSLSSFYPAANWFEREAYDFFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPDLRR+LTDYGF+GHPLRKDFP+TG+ E+ YDD+ K+VVY PV+L+QE R +DFL
Sbjct: 131 LFSGHPDLRRLLTDYGFDGHPLRKDFPMTGYAEVRYDDEQKRVVYEPVQLVQEFRSFDFL 190
Query: 183 SPWEGV-NSLFAKEDS 197
SPWEG + + ++
Sbjct: 191 SPWEGAIDYILPGDEK 206
>gi|119384980|ref|YP_916036.1| NADH dehydrogenase subunit C [Paracoccus denitrificans PD1222]
gi|409252|gb|AAA03037.1| NADH dehydrogenase [Paracoccus denitrificans]
gi|119374747|gb|ABL70340.1| NADH dehydrogenase subunit C [Paracoccus denitrificans PD1222]
Length = 208
Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats.
Identities = 98/206 (47%), Positives = 136/206 (66%), Gaps = 5/206 (2%)
Query: 1 MVRKIED-----LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M + D L ++I V + GEL+++ ++ L FLR+DP+C F
Sbjct: 1 MSEALSDEALLELAEHIALRRENDVISTQVAFGELTVNATLSGVIGLIEFLRNDPNCRFS 60
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
+ID+ VD +R RFDVVYH LS N+R+RVK+ V E + VPS++G++PGA+W+ERE
Sbjct: 61 TLIDITAVDNPARPARFDVVYHLLSMYQNQRIRVKVQVREDELVPSLIGVFPGANWYERE 120
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
V+D++GI F GH DLRRILTDYGF GHPLRKDFP TG+VE+ + D K+VVY PV L+QE
Sbjct: 121 VFDLFGILFSGHSDLRRILTDYGFRGHPLRKDFPTTGYVEVRWSDIEKRVVYEPVNLVQE 180
Query: 176 HRDYDFLSPWEGVNSLFAKEDSKDDM 201
+R +DFLSPWEG + ++ +
Sbjct: 181 YRQFDFLSPWEGAKYVLPGDEKAPEA 206
>gi|319898884|ref|YP_004158977.1| NADH dehydrogenase I chain C [Bartonella clarridgeiae 73]
gi|319402848|emb|CBI76399.1| NADH dehydrogenase I chain C [Bartonella clarridgeiae 73]
Length = 202
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 99/201 (49%), Positives = 132/201 (65%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L +Y+ + + +V + GEL++ ++ + F+RDD C F+NI D+
Sbjct: 1 MNEVLIELSNYLKDKLGDKIEESVFAFGELTIVSRLNAIIDVLMFVRDDSRCQFINITDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y LSP++N RLR+K+ E + S +YPGA+W+ERE +DMY
Sbjct: 61 SGVDYPSREKRFDVSYQLLSPRHNLRLRIKVRTDENTPIASACSVYPGAEWYERETYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++ K+V+Y PV L QE R +D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVILRQEMRSFD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
FLSPWEG + +
Sbjct: 181 FLSPWEGNEYVLPCNEKSGSK 201
>gi|288856261|ref|NP_001165786.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Nasonia vitripennis]
Length = 264
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 91/200 (45%), Positives = 130/200 (65%), Gaps = 1/200 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++D G Y+ V+ G EL + + ++ SFL+D +C F N+ D+
Sbjct: 59 AQLKDFGQYVAECLPKYVQKVQIEAGDELEICIAPEGIIPTVSFLKDHHNCQFTNLSDIT 118
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR RF++VY+ LS +YN R+RVK E V SI ++ ADW+EREVWDM+G
Sbjct: 119 AVDIPSRPYRFELVYNILSIRYNTRIRVKTYTDELTPVDSIYDVHKAADWYEREVWDMFG 178
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I+F GHPDLRRILTDYGFEGHP+RKDFP+TG++E+ YDD+ K+VV P+EL QE+R ++
Sbjct: 179 IYFAGHPDLRRILTDYGFEGHPMRKDFPLTGYIEVRYDDEKKRVVAEPLELAQEYRKFEL 238
Query: 182 LSPWEGVNSLFAKEDSKDDM 201
+PWE + +S +D+
Sbjct: 239 SAPWEQFPNFRNASNSAEDV 258
>gi|163868371|ref|YP_001609580.1| NADH dehydrogenase subunit C [Bartonella tribocorum CIP 105476]
gi|218534256|sp|A9IUQ0|NUOC_BART1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|161018027|emb|CAK01585.1| NADH dehydrogenase I chain C [Bartonella tribocorum CIP 105476]
Length = 203
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 102/201 (50%), Positives = 133/201 (66%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ N + V + GEL++ + + F+RDD HC F+N+ D+
Sbjct: 2 MDESLVELATYLKNKLGNKLEETVFAFGELTIVARLDAITDVLMFVRDDSHCQFINLTDI 61
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y LSP+ N RLRVK+ E V S +YPGA+W+ERE +DMY
Sbjct: 62 SGVDYPSRDKRFDVSYQLLSPRENLRLRVKVRTDENTPVASACTVYPGAEWYERETYDMY 121
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEG+PLRKDFPVTGFVE YD++ K+V+Y PV L QE R++D
Sbjct: 122 GILFSGHPDLRRILTDYGFEGYPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFD 181
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
FLSPWEG + + +D+
Sbjct: 182 FLSPWEGGQYVLPCDGKEDEK 202
>gi|126332740|ref|XP_001370635.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein
3 [Monodelphis domestica]
Length = 354
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 87/198 (43%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 146 KQLSAFGEYVAEILPKYVQQVQVSYFNELEICIHPDGVIPVLTFLRDHTNAQFKSLADLG 205
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E V S+V ++ A+W+ERE+WDM+G
Sbjct: 206 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPVDSVVSVHKAANWYEREIWDMFG 265
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 266 VYFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELAQEFRKFDL 325
Query: 182 LSPWEGVNSLFAKEDSKD 199
SPWE + +S
Sbjct: 326 NSPWEAFPAYRQPPESPK 343
>gi|304391400|ref|ZP_07373342.1| NADH-quinone oxidoreductase chain 5 [Ahrensia sp. R2A130]
gi|303295629|gb|EFL89987.1| NADH-quinone oxidoreductase chain 5 [Ahrensia sp. R2A130]
Length = 204
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 97/201 (48%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ DL Y+ + S + AV + EL+L ++ ++ FLRDD F+ IDL
Sbjct: 4 ADLPDLKAYLDEALSDKLDGAVIAFNELTLTTTASNIHAVLRFLRDDVQTSFICFIDLAA 63
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R RF+VVYH LSP+ N R+R+K++ VPSI I+P ADWFERE +D+YG+
Sbjct: 64 VDYPQRRQRFEVVYHLLSPRQNLRVRIKLSTDAETPVPSINDIFPAADWFEREAYDLYGV 123
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F GHPD+RR+LTDYGFEGHPLRKDFP+TGF ++ YDD K+VVY PV L QE RD+DF
Sbjct: 124 LFTGHPDMRRLLTDYGFEGHPLRKDFPLTGFTQVRYDDAEKRVVYEPVLLRQEFRDFDFQ 183
Query: 183 SPWEGVNSL----FAKEDSKD 199
SPWEG + + ++ +
Sbjct: 184 SPWEGTDYIIPEALPGDEKAN 204
>gi|58268506|ref|XP_571409.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Cryptococcus
neoformans var. neoformans JEC21]
gi|134112874|ref|XP_774980.1| hypothetical protein CNBF1440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257628|gb|EAL20333.1| hypothetical protein CNBF1440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227644|gb|AAW44102.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 284
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ G Y++ S V+ EL++ + ++ + +FLRD C + I+D+ VD
Sbjct: 74 LHQYGQYLLASLPKYVQQFSVYKDELTIYIPPQAVLPVFTFLRDHTQCQYRQIVDITAVD 133
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
F ++ NRF+VVYH LS + R+RVK E VPS+VG++ GA+W+EREVWDMYGIFF
Sbjct: 134 FPTKPNRFEVVYHLLSHAHQSRIRVKTYADEVTPVPSVVGLFNGANWYEREVWDMYGIFF 193
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY-DFLS 183
EGHPDLRRILTDYGFEG PLRKDFP+TG+ E+ YDD+ K+VVY P++L Q R++ D S
Sbjct: 194 EGHPDLRRILTDYGFEGFPLRKDFPLTGYTEVRYDDEKKRVVYEPLQLTQAFRNFNDAAS 253
Query: 184 PWEGVN 189
PWE V
Sbjct: 254 PWEQVG 259
>gi|212531473|ref|XP_002145893.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Penicillium marneffei ATCC 18224]
gi|210071257|gb|EEA25346.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Penicillium marneffei ATCC 18224]
Length = 306
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI++ V+ EL++ V L+ + +FL+ + I D+
Sbjct: 72 ADAMHKYGQYIMSCLPKYVQQFSVWKDELTVYVPPSGLIPVMTFLKYHTAAEYTQISDIT 131
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ +R RF+VVY+ LS ++N R+RVK E + VPS+ ++ GA W+EREV+DM+G
Sbjct: 132 AVDYPTRDQRFEVVYNMLSVRHNSRIRVKTYCDEAQPVPSVTSLFDGALWYEREVYDMFG 191
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRR+LTDYGF+GHPLRKDFP+TG+ E+ YD++ K++VY P+EL Q R+++
Sbjct: 192 VFFTGHPDLRRMLTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVYEPLELTQAFRNFEG 251
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 252 GTSSWEQVG 260
>gi|255932309|ref|XP_002557711.1| Pc12g08820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582330|emb|CAP80509.1| Pc12g08820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 289
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 123/190 (64%), Gaps = 1/190 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + G Y+++ ++ EL++ +V + SFL++ F I D+
Sbjct: 75 MADSLHAYGQYVMSCLPKYIQQFTVWKDELTVYTAPAGVVPVMSFLKNHTAAEFTQISDI 134
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVDF +R RF+VVY+ LS ++N R+RVK E VPS+ G++ GA W+EREV+DM+
Sbjct: 135 TGVDFPTRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSVTGLFEGALWYEREVYDMF 194
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 195 GVFFSGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFE 254
Query: 181 FLS-PWEGVN 189
S WE V
Sbjct: 255 SGSTAWEPVG 264
>gi|321259926|ref|XP_003194683.1| NADH-ubiquinone oxidoreductase mitochondrial precursor
[Cryptococcus gattii WM276]
gi|317461155|gb|ADV22896.1| NADH-ubiquinone oxidoreductase mitochondrial precursor, putative
[Cryptococcus gattii WM276]
Length = 286
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 96/188 (51%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ + G YI+NS V+ EL+L + ++ + +FLRD C + ++D+
Sbjct: 74 TALHEYGQYILNSLPRYVQQFSVYKDELTLYIPPQAVIPVFTFLRDHTQCQYRQVVDITA 133
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VDF ++ +RF+VVYH LS + R+RVK E +VPS+VG++ GA+WFEREVWDMYGI
Sbjct: 134 VDFPTKPSRFEVVYHLLSHAHQSRIRVKTYADEVTAVPSVVGLFNGANWFEREVWDMYGI 193
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY-DF 181
FFEGHPDLRRILTDYGFEG PLRKDFP+TG+ E+ YDD+ K+VVY P++L Q R++ D
Sbjct: 194 FFEGHPDLRRILTDYGFEGFPLRKDFPLTGYTEVRYDDEKKRVVYEPLQLTQAFRNFNDA 253
Query: 182 LSPWEGVN 189
SPWE V
Sbjct: 254 ASPWEQVG 261
>gi|114707369|ref|ZP_01440266.1| NADH dehydrogenase subunit C [Fulvimarina pelagi HTCC2506]
gi|114537250|gb|EAU40377.1| NADH dehydrogenase subunit C [Fulvimarina pelagi HTCC2506]
Length = 202
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 136/195 (69%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
D+ D ++ S + GEL+L V ++V + + LRDDP F+N +DLCGVDF
Sbjct: 8 SDVRDAVLESLEDRIEDHFFRFGELTLVVTPENVVKVMTTLRDDPKMQFINFVDLCGVDF 67
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
R RF+VVYH LSP+ N R+RVK AE VPS+ ++P ADWFERE +D+YGI F
Sbjct: 68 PQREKRFEVVYHLLSPRQNCRIRVKTMTAEDDPVPSVSDVFPAADWFEREAYDLYGILFT 127
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
GHPDLRRILTDYGFEG+PLRKDFP+TGFVE+ YD++ K+VVY PV+L QE R++DFLSPW
Sbjct: 128 GHPDLRRILTDYGFEGYPLRKDFPLTGFVEVRYDEERKQVVYEPVDLRQEFRNFDFLSPW 187
Query: 186 EGVNSLFAKEDSKDD 200
EG + ++ +
Sbjct: 188 EGTEYVLPGDEKAPN 202
>gi|302563721|ref|NP_001181232.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Macaca mulatta]
Length = 264
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 56 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGIIPVLTFLRDHTNAQFKSLVDLT 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S + ++ A+W+ERE+WDM+G
Sbjct: 116 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAMSVFKAANWYEREIWDMFG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 176 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELAQEFRKFDL 235
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 236 NSPWEAFPVYRQPPES 251
>gi|326428094|gb|EGD73664.1| NADH dehydrogenase iron-sulfur protein 3 [Salpingoeca sp. ATCC
50818]
Length = 246
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 95/193 (49%), Positives = 132/193 (68%), Gaps = 4/193 (2%)
Query: 1 MVR---KIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M K+E+LG +I ++ ++ A S EL L + ++ + +FLRD+ C F
Sbjct: 44 MTEERQKLEELGQFIASALPKYIQVAQVSACDELELFIAPASVLPVLTFLRDNTLCQFKV 103
Query: 57 IIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREV 116
+ D CGVD R+NRF++VY+ LS ++N R+RV+ E +V S ++ A+W+ERE+
Sbjct: 104 LADQCGVDIPKRANRFEIVYNLLSLRHNLRVRVRTYTDELSAVDSACSVFNAANWYEREI 163
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
WDMYG++F GHPDLRRILTDYGFEGHPLRKDFP++GFVE+ YD+ VK+VV PVEL QE
Sbjct: 164 WDMYGVYFLGHPDLRRILTDYGFEGHPLRKDFPLSGFVEVRYDEDVKRVVCEPVELAQEF 223
Query: 177 RDYDFLSPWEGVN 189
R +DF SPWE +
Sbjct: 224 RKFDFESPWEQLP 236
>gi|319407265|emb|CBI80904.1| NADH dehydrogenase I chain C [Bartonella sp. 1-1C]
Length = 202
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 131/198 (66%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + ++ + GEL++ + + F+RDD C F++I D+
Sbjct: 1 MSETLSELSSYLKDKLGDKIEESILAFGELTIVSRLDAITDVLMFVRDDSRCQFISITDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y LSP++N RLR+K+ E +V S IYPGA+W+ERE +DMY
Sbjct: 61 SGVDYPSREKRFDVSYQLLSPRHNLRLRIKVRTDENIAVASACSIYPGAEWYEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++ K+V+Y PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG +
Sbjct: 181 FLSPWEGHEHISLCGKKS 198
>gi|218516290|ref|ZP_03513130.1| NADH dehydrogenase subunit C [Rhizobium etli 8C-3]
Length = 177
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 109/176 (61%), Positives = 128/176 (72%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY 83
GEL+L +L+ L +FLRDD C FVN+ID+CGVD+ R RFDVVYH LSPK
Sbjct: 1 QLKYGELTLTATGENLIPLLTFLRDDAKCGFVNLIDICGVDWPQRELRFDVVYHLLSPKT 60
Query: 84 NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
N R+RVK+A E VPS +YPGADWFERE WDMYG+ F GHPDLRRILTDYGFEGHP
Sbjct: 61 NLRIRVKVATDEDTPVPSACAVYPGADWFERETWDMYGVLFTGHPDLRRILTDYGFEGHP 120
Query: 144 LRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKD 199
LRKDFP TGFVE+ YDD K+VVY PVEL QE R++DF+SPWEG + ++
Sbjct: 121 LRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFMSPWEGTEYVLPGDEKAK 176
>gi|242773027|ref|XP_002478155.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Talaromyces stipitatus ATCC 10500]
gi|218721774|gb|EED21192.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Talaromyces stipitatus ATCC 10500]
Length = 285
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI++ V+ EL++ V LV + +FL+ F I D+
Sbjct: 72 ADAMHKYGQYIMSCLPKYVQQFSVWKDELTIFVPPSGLVPVMTFLKYHTAAEFTQISDIT 131
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ +R RF+VVY+ LS ++N R+RVK E + VPS+ +Y GA W+EREV+DM+G
Sbjct: 132 AVDYPTRDQRFEVVYNLLSVRHNSRIRVKTYCDEAQPVPSMTSLYDGALWYEREVYDMFG 191
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRR+LTDYGF+GHPLRKDFP+TG+ E+ YD++ K++VY P+EL Q R+++
Sbjct: 192 VFFSGHPDLRRMLTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVYEPLELTQAFRNFEG 251
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 252 GTSSWEQVG 260
>gi|302383047|ref|YP_003818870.1| NADH (or F420H2) dehydrogenase, subunit C [Brevundimonas
subvibrioides ATCC 15264]
gi|302193675|gb|ADL01247.1| NADH (or F420H2) dehydrogenase, subunit C [Brevundimonas
subvibrioides ATCC 15264]
Length = 231
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 8/200 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ LG +V + A + GEL+L +V + + LRD F ++D+C
Sbjct: 21 TAVLTPLGQEMVAALQ---VDATVAYGELTLTCHRDRIVGVLTDLRD--RFGFQQLLDVC 75
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ R+ RFDVVYH LS N R+RVK+ E VP+++ +YP A+WFERE +DMYG
Sbjct: 76 GVDYPDRAERFDVVYHLLSLTRNARVRVKVTTDEVAPVPTVISVYPSAEWFEREAFDMYG 135
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ F HPDLRR+LTDYGF+GHPLRKDFP+TG+VE+ YD++ K+VVY PV+L QE R++DF
Sbjct: 136 MLFSDHPDLRRLLTDYGFQGHPLRKDFPMTGYVEVRYDEEQKRVVYEPVKLTQEFRNFDF 195
Query: 182 LSPWEGVNS---LFAKEDSK 198
LSPWEG + ++
Sbjct: 196 LSPWEGAEYPADVLPGDEKA 215
>gi|302694895|ref|XP_003037126.1| hypothetical protein SCHCODRAFT_80667 [Schizophyllum commune H4-8]
gi|300110823|gb|EFJ02224.1| hypothetical protein SCHCODRAFT_80667 [Schizophyllum commune H4-8]
Length = 269
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 87/189 (46%), Positives = 121/189 (64%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y++ ++ EL++ L+ + +FLRD C F + +D+
Sbjct: 54 TEALHTYGAYLMQCMPKFIQQFSVLRDELTIYTAPSGLIPVLTFLRDHGQCQFKSCMDVS 113
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G D+ R RF+ VYH LS + R+RVK E +PS VG+YPGA+W+ERE WD+YG
Sbjct: 114 GADYPEREKRFESVYHLLSYRSGGRIRVKTYAGEADPIPSAVGVYPGANWYEREAWDLYG 173
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IF+ GHPDLRRILTDYGFEGHPLRKDFP++G+ EL YD++ K+VVY P++L Q R+++
Sbjct: 174 IFYSGHPDLRRILTDYGFEGHPLRKDFPISGYTELRYDEERKRVVYEPLQLTQAFRNFEA 233
Query: 182 LSPWEGVNS 190
SPWE V
Sbjct: 234 QSPWEQVGH 242
>gi|73983298|ref|XP_533185.2| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein
3, 30kDa (NADH-coenzyme Q reductase) [Canis familiaris]
Length = 263
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 89/196 (45%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHTNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 115 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESTVSVYKAANWYEREIWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 235 NSPWEAFPAYRQPPES 250
>gi|212531471|ref|XP_002145892.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Penicillium marneffei ATCC 18224]
gi|210071256|gb|EEA25345.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Penicillium marneffei ATCC 18224]
Length = 285
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI++ V+ EL++ V L+ + +FL+ + I D+
Sbjct: 72 ADAMHKYGQYIMSCLPKYVQQFSVWKDELTVYVPPSGLIPVMTFLKYHTAAEYTQISDIT 131
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ +R RF+VVY+ LS ++N R+RVK E + VPS+ ++ GA W+EREV+DM+G
Sbjct: 132 AVDYPTRDQRFEVVYNMLSVRHNSRIRVKTYCDEAQPVPSVTSLFDGALWYEREVYDMFG 191
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRR+LTDYGF+GHPLRKDFP+TG+ E+ YD++ K++VY P+EL Q R+++
Sbjct: 192 VFFTGHPDLRRMLTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVYEPLELTQAFRNFEG 251
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 252 GTSSWEQVG 260
>gi|326920390|ref|XP_003206457.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Meleagris gallopavo]
Length = 344
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 88/195 (45%), Positives = 125/195 (64%), Gaps = 1/195 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ ++ + EL L + ++ + +FLRD + F ++ DL
Sbjct: 136 KQLCAFGEYVAEILPKYIQQVQVTCFNELELLIHPDGIIPVLTFLRDHTNAQFKSLADLT 195
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR RF++VY+ LS ++N R+RVK E + S V ++ A+W+EREVWDMYG
Sbjct: 196 AVDVPSRQYRFEIVYNLLSLRFNSRIRVKTYTDELTPIDSAVSVHKAANWYEREVWDMYG 255
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 256 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELSQEFRKFDL 315
Query: 182 LSPWEGVNSLFAKED 196
SPWE + A +
Sbjct: 316 NSPWEAFPAYRAPPE 330
>gi|62955483|ref|NP_001017755.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Danio rerio]
gi|62205446|gb|AAH93359.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, (NADH-coenzyme Q
reductase) [Danio rerio]
gi|182889640|gb|AAI65450.1| Ndufs3 protein [Danio rerio]
Length = 255
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 88/197 (44%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ + G+Y+ V+ + EL + V ++ + +FL+D + F N+ DL
Sbjct: 50 QLSEFGEYVAEILPKYVQQVQVTCFNELEIMVHPEGIIPVLTFLKDHTNAQFRNLADLTA 109
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD S+ NRF++VY+ LS YN R+RVK E + S V ++ ++W+EREVWDM+G+
Sbjct: 110 VDIPSKQNRFEIVYNLLSLHYNSRIRVKTYTDELTPLDSSVPVFQASNWYEREVWDMFGV 169
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 170 FFTNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELAQEFRKFDLN 229
Query: 183 SPWEGVNSLFAKEDSKD 199
SPWE + +D+
Sbjct: 230 SPWEAFPAYRGPKDAPK 246
>gi|254780854|ref|YP_003065267.1| NADH dehydrogenase subunit C [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040531|gb|ACT57327.1| NADH dehydrogenase subunit C [Candidatus Liberibacter asiaticus
str. psy62]
Length = 202
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL
Sbjct: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY
Sbjct: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD
Sbjct: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
Query: 181 FLSPWEGVNSLFAKEDSKDDMS 202
FLSPWEGVNSLFAKEDSKDDMS
Sbjct: 181 FLSPWEGVNSLFAKEDSKDDMS 202
>gi|296218072|ref|XP_002755284.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Callithrix jacchus]
Length = 262
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 87/196 (44%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FL+D + F ++ DL
Sbjct: 54 KQLSAFGEYVAEILPKYVQQVQVSLFDELEICIHPDGIIPVLTFLKDHTNAQFKSLADLT 113
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S+ ++ A+W+EREVWDM+G
Sbjct: 114 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESLTSVFKAANWYEREVWDMFG 173
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 174 VFFVNHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 233
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 234 NSPWEAFPIYRQPPES 249
>gi|326474911|gb|EGD98920.1| NADH-ubiquinone oxidoreductase 304 kDa subunit [Trichophyton
tonsurans CBS 112818]
Length = 308
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ G Y+++ ++ EL++ V +V + +FLRD + + D+
Sbjct: 77 SAKLHTYGQYLISCLPKYIQQFSVWKDELTIYVPPAGVVPVMTFLRDHTAAEYTQVSDIT 136
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI +Y GA WFEREV+DM+G
Sbjct: 137 AVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITSLYDGALWFEREVYDMFG 196
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP++G+ E+ YD++ K++V P+EL Q R+++
Sbjct: 197 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLSGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 256
Query: 181 FLSPWEGVNSLFAKEDSKDDMS 202
S WEG+ + D++S
Sbjct: 257 GSSAWEGIG--QGVDRKPDNVS 276
>gi|4758788|ref|NP_004542.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial precursor [Homo sapiens]
gi|6166589|sp|O75489|NDUS3_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
3, mitochondrial; AltName: Full=Complex I-30kD;
Short=CI-30kD; AltName: Full=NADH-ubiquinone
oxidoreductase 30 kDa subunit; Flags: Precursor
gi|10443631|gb|AAG17541.1|AF200954_1 NADH dehydrogenase-ubiquinone 30 kDa subunit [Homo sapiens]
gi|3337441|gb|AAC27451.1| NADH:ubiquinone oxidoreductase NDUFS3 subunit [Homo sapiens]
gi|12653669|gb|AAH00617.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) [Homo sapiens]
gi|119588301|gb|EAW67895.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase), isoform CRA_a [Homo
sapiens]
gi|123982062|gb|ABM82860.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) [synthetic construct]
gi|123996891|gb|ABM86047.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) [synthetic construct]
gi|189054031|dbj|BAG36538.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 56 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 116 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 176 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 235
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 236 NSPWEAFPVYRQPPES 251
>gi|120952190|ref|NP_001073382.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial precursor [Pan troglodytes]
gi|115502345|sp|Q0MQG8|NDUS3_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
3, mitochondrial; AltName: Full=Complex I-30kD;
Short=CI-30kD; AltName: Full=NADH-ubiquinone
oxidoreductase 30 kDa subunit; Flags: Precursor
gi|111661908|gb|ABH12175.1| mitochondrial complex I subunit NDUFS3 [Pan troglodytes]
Length = 264
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 56 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 116 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 176 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 235
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 236 NSPWEAFPVYRQPPES 251
>gi|194217899|ref|XP_001491322.2| PREDICTED: similar to NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial precursor (NADH-ubiquinone
oxidoreductase 30 kDa subunit) (Complex I-30kD)
(CI-30kD) [Equus caballus]
Length = 263
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHSNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 115 AVDIPTRQNRFEIVYNLLSLRFNCRIRVKTYTDELTPIESAVSVHKAANWYEREIWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 235 NSPWEAFPAYRQPPES 250
>gi|195442360|ref|XP_002068926.1| GK18031 [Drosophila willistoni]
gi|194165011|gb|EDW79912.1| GK18031 [Drosophila willistoni]
Length = 266
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ + EL + + +V + FL+D F N++D+
Sbjct: 58 TNLSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIA 117
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D R NRF+VVY+ LS ++N R+RVK E + S ++ A+W+ERE+WDMYG
Sbjct: 118 GLDVPCRKNRFEVVYNLLSLRFNARIRVKTYTDELTPLDSACDVHKAANWYEREIWDMYG 177
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 178 VFFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDL 237
Query: 182 LSPWEGVNSLFAKEDSKD 199
+PWE + +
Sbjct: 238 SAPWEQFPNFRNANPPAE 255
>gi|225681275|gb|EEH19559.1| NADH-ubiquinone oxidoreductase 27 kDa subunit [Paracoccidioides
brasiliensis Pb03]
Length = 288
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 82/198 (41%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ ++ EL++ V ++ + +FL+ + + D+
Sbjct: 74 SAALHKYGQYLISCLPKYIQQFSVWKDELTIYVPPSGIIPVFTFLKQHTAAEYTQVSDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI G+Y GA W+EREV+DM+G
Sbjct: 134 AVDFPTRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITGLYDGALWYEREVYDMFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 194 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 253
Query: 181 FLSPWEGVNSLFAKEDSK 198
S WE + K+ S+
Sbjct: 254 GTSAWEQIGEGIDKKPSE 271
>gi|254418963|ref|ZP_05032687.1| NADH (or F420H2) dehydrogenase, subunit C subfamily, putative
[Brevundimonas sp. BAL3]
gi|196185140|gb|EDX80116.1| NADH (or F420H2) dehydrogenase, subunit C subfamily, putative
[Brevundimonas sp. BAL3]
Length = 209
Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats.
Identities = 91/181 (50%), Positives = 122/181 (67%), Gaps = 5/181 (2%)
Query: 21 RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS 80
A + GEL+L +V + + LRD F ++DLCG D+ R RF+VVYH LS
Sbjct: 27 VEAQVAFGELTLLAPRERIVEVMTALRD--QFGFQQLLDLCGADYPDREERFEVVYHLLS 84
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
N R+RVK+ E + V ++ G+YP A WFERE +DMYG+ F GHPD+RR+LTDYGFE
Sbjct: 85 MTRNARVRVKVVTDEVQPVATVTGVYPSAGWFEREAYDMYGVIFSGHPDMRRLLTDYGFE 144
Query: 141 GHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNS---LFAKEDS 197
GHPLRKDFP+TG+VE+ YD++ K+VVY PV+L QE R +DFLSPWEG + + ++
Sbjct: 145 GHPLRKDFPMTGYVEVRYDEEQKRVVYEPVKLTQEFRTFDFLSPWEGADYPAPVLPGDEK 204
Query: 198 K 198
Sbjct: 205 A 205
>gi|226372312|gb|ACO51781.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Rana catesbeiana]
Length = 253
Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats.
Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + GEL + + G ++ + +FLRD + F N+ DL
Sbjct: 46 NQLSAFGEYVSEILPKYVQQVQVTCFGELEIMIHPGGVIPVLTFLRDHTNAQFKNMADLT 105
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
V +R NRF+++Y+ LS ++N R+RVK E V SIV ++ +W+EREVWDMYG
Sbjct: 106 AVGIPTRENRFEIIYNLLSLRFNARIRVKTYADELTPVESIVSVHKAVNWYEREVWDMYG 165
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PV+L QE R +D
Sbjct: 166 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVQLSQEFRKFDL 225
Query: 182 LSPWEGVNSLFAKEDSKD 199
SPWE + ++S
Sbjct: 226 SSPWEAFPAHREAQESPK 243
>gi|115502344|sp|Q0MQG7|NDUS3_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
3, mitochondrial; AltName: Full=Complex I-30kD;
Short=CI-30kD; AltName: Full=NADH-ubiquinone
oxidoreductase 30 kDa subunit; Flags: Precursor
gi|111661910|gb|ABH12176.1| mitochondrial complex I subunit NDUFS3 [Gorilla gorilla]
Length = 263
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 235 NSPWEAFPVYRQPPES 250
>gi|319404257|emb|CBI77850.1| NADH dehydrogenase I chain C [Bartonella rochalimae ATCC BAA-1498]
Length = 202
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 100/198 (50%), Positives = 132/198 (66%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + ++ + GEL++ + + F+RDD C F++I D+
Sbjct: 1 MSETLSELSSYLKDKLGDKIEESILAFGELTVVSRLDAITDVLMFVRDDSRCQFISITDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y LSP++N RLRVK+ E +V S IYPGA+W+ERE +DMY
Sbjct: 61 SGVDYPSREKRFDVSYQLLSPRHNLRLRVKVRTDENVAVASACSIYPGAEWYEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++VK+++Y PV L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEVKRIIYEPVVLRQEMRNFD 180
Query: 181 FLSPWEGVNSLFAKEDSK 198
FLSPWEG +
Sbjct: 181 FLSPWEGNEHISLCGKKS 198
>gi|115502346|sp|Q0MQG6|NDUS3_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
3, mitochondrial; AltName: Full=Complex I-30kD;
Short=CI-30kD; AltName: Full=NADH-ubiquinone
oxidoreductase 30 kDa subunit; Flags: Precursor
gi|111661912|gb|ABH12177.1| mitochondrial complex I subunit NDUFS3 [Pongo pygmaeus]
Length = 263
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 55 QQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 235 NSPWEAFPVYRQPPES 250
>gi|226292012|gb|EEH47432.1| NADH dehydrogenase iron-sulfur protein [Paracoccidioides
brasiliensis Pb18]
Length = 288
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 82/198 (41%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ ++ EL++ V ++ + +FL+ + + D+
Sbjct: 74 SSALHKYGQYLISCLPKYIQQFSVWKDELTIYVPPSGIIPVFTFLKQHTAAEYTQVSDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI G+Y GA W+EREV+DM+G
Sbjct: 134 AVDFPTRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITGLYDGALWYEREVYDMFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 194 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 253
Query: 181 FLSPWEGVNSLFAKEDSK 198
S WE + K+ S+
Sbjct: 254 GTSAWEQIGEGIDKKPSE 271
>gi|291384976|ref|XP_002709147.1| PREDICTED: NADH dehydrogenase (ubiquinone) Fe-S protein 3
[Oryctolagus cuniculus]
Length = 263
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 90/196 (45%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQHVQVSCFDELEICIHPDGVIPVLTFLRDHTNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR NRF++VY+ LS ++N R+RVK E V S V ++ A+W+ERE+WDM+G
Sbjct: 115 AVDIPSRQNRFEIVYNLLSLRFNTRIRVKTYTDELTPVDSAVPVHKAANWYEREIWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 235 NSPWEAFPAYRQPPES 250
>gi|83592892|ref|YP_426644.1| NADH dehydrogenase subunit C [Rhodospirillum rubrum ATCC 11170]
gi|123526696|sp|Q2RU38|NUOC_RHORT RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|83575806|gb|ABC22357.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodospirillum rubrum
ATCC 11170]
Length = 213
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 91/201 (45%), Positives = 132/201 (65%), Gaps = 4/201 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++LG I + V + EL + + + +FLRDD C F ++D+ G
Sbjct: 10 ESLKELGARIEAALPTDVVRVEMAKDELQVIAQRPSIAKVLTFLRDDSACRFSQLVDIAG 69
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ SR RF+VVY+ LS +N+R+RVKI+ +E VPS+ ++ A+WFERE WDMYGI
Sbjct: 70 VDYPSREERFEVVYNMLSMHHNQRIRVKISASEDTPVPSVTRVFSSANWFEREAWDMYGI 129
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRR+L+DYGFEGH RKDFP+TG+ E+ YD+++K+VVY PV L Q+ R +DFL
Sbjct: 130 FFSEHPDLRRLLSDYGFEGHAQRKDFPLTGYKEVRYDEELKRVVYEPVRLSQDFRTFDFL 189
Query: 183 SPWEGVN----SLFAKEDSKD 199
SPWEG++ + ++ +
Sbjct: 190 SPWEGMDRQIRRVLPGDEKAE 210
>gi|238581805|ref|XP_002389728.1| hypothetical protein MPER_11103 [Moniliophthora perniciosa FA553]
gi|215452310|gb|EEB90658.1| hypothetical protein MPER_11103 [Moniliophthora perniciosa FA553]
Length = 240
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 96/195 (49%), Positives = 125/195 (64%), Gaps = 7/195 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G Y+ ++ EL+L V ++ + FLRD C F +I+D+
Sbjct: 22 TEQLHTYGSYLTQCLPKFIQQFSVVNDELTLYVAPSAILPVLQFLRDHSQCQFKSIMDIS 81
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVDF R RF+VVYH LS KY R+RVK EG VPS V ++ GADW+ERE WD++G
Sbjct: 82 GVDFPEREKRFEVVYHMLSVKYRGRIRVKTYAGEGDHVPSAVELFRGADWYEREAWDLFG 141
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVT-------GFVELHYDDKVKKVVYRPVELMQ 174
IFF GHPDLRRILTDYGFEGHPLRKDFP+T G+ EL YD++ K+VVY P++L Q
Sbjct: 142 IFFSGHPDLRRILTDYGFEGHPLRKDFPLTVGIIEVSGYTELRYDEERKRVVYEPLQLTQ 201
Query: 175 EHRDYDFLSPWEGVN 189
R+++ LSPWE V
Sbjct: 202 AFRNFEALSPWEQVG 216
>gi|266655|sp|P29917|NQO5_PARDE RecName: Full=NADH-quinone oxidoreductase chain 5; AltName:
Full=NADH dehydrogenase I, chain 5; AltName: Full=NDH-1,
chain 5
Length = 207
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/206 (48%), Positives = 137/206 (66%), Gaps = 6/206 (2%)
Query: 1 MVRKIED-----LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M + D L ++I V +VGEL+++ ++ L FLR+DP+C F
Sbjct: 1 MSEALSDEALLELAEHIAVRRENDVISTQ-AVGELTVNATLSGVIGLIEFLRNDPNCRFS 59
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
+ID+ VD +R RFDVVYH LS N+R+RVK+ V E + VPS++G++PGA+W+ERE
Sbjct: 60 TLIDITAVDNPARPARFDVVYHLLSMYQNQRIRVKVQVREDELVPSLIGVFPGANWYERE 119
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
V+D++GI F GH DLRRILTDYGF GHPLRKDFP TG+VE+ + D K+VVY PV L+QE
Sbjct: 120 VFDLFGILFSGHSDLRRILTDYGFRGHPLRKDFPTTGYVEVRWSDIEKRVVYEPVNLVQE 179
Query: 176 HRDYDFLSPWEGVNSLFAKEDSKDDM 201
+R +DFLSPWEG + ++ +
Sbjct: 180 YRQFDFLSPWEGAKYVLPGDEKAPEA 205
>gi|115400439|ref|XP_001215808.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
gi|114191474|gb|EAU33174.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
Length = 688
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 84/199 (42%), Positives = 123/199 (61%), Gaps = 3/199 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI+ V+ EL + V ++ + SFL+ + I D+
Sbjct: 27 ADSLHKYGQYIMACLPKHVQQFSVWKDELVIYVPPTGVIPVMSFLKYHTAAEYTQISDIT 86
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS +YN R+RVK E + VPS+ G++ GA W+EREV+DM+G
Sbjct: 87 AVDFPTRDQRFEVVYNLLSVRYNSRIRVKTYADEARPVPSVTGLFEGALWYEREVYDMFG 146
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 147 VFFSGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFEG 206
Query: 182 LS-PWEGVNSLFAKEDSKD 199
+ WE V ++ +
Sbjct: 207 GTAAWEPVG--LGQDRKPE 223
>gi|27807353|ref|NP_777244.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial precursor [Bos taurus]
gi|163416|gb|AAA30663.1| NADH dehydrogenase (ubiquinone) [Bos taurus]
Length = 266
Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats.
Identities = 89/196 (45%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 58 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHSNAQFKSLADLT 117
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 118 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVPVYKAANWYEREIWDMFG 177
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 178 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 237
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 238 NSPWEAFPAYRQPPES 253
>gi|5138999|gb|AAD40386.1| NADH-Ubiquinone reductase [Homo sapiens]
Length = 263
Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 235 NSPWEAFPVYRQPPES 250
>gi|295673804|ref|XP_002797448.1| NADH dehydrogenase iron-sulfur protein [Paracoccidioides
brasiliensis Pb01]
gi|226282820|gb|EEH38386.1| NADH dehydrogenase iron-sulfur protein [Paracoccidioides
brasiliensis Pb01]
Length = 288
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 82/198 (41%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ ++ EL++ V ++ + +FL+ + + D+
Sbjct: 74 SAALHKYGQYLMSCLPKYIQQFSVWKDELTIYVPPSGIIPVFTFLKQHTAAEYTQVSDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI G+Y GA W+EREV+DM+G
Sbjct: 134 AVDFPTRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITGLYDGALWYEREVYDMFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 194 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 253
Query: 181 FLSPWEGVNSLFAKEDSK 198
S WE + K+ S+
Sbjct: 254 GTSAWEQIGEGIDKKPSE 271
>gi|128860|sp|P23709|NDUS3_BOVIN RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
3, mitochondrial; AltName: Full=Complex I-30kD;
Short=CI-30kD; AltName: Full=NADH-ubiquinone
oxidoreductase 30 kDa subunit; Flags: Precursor
Length = 266
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 89/196 (45%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 58 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHSNAQFKSLADLT 117
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 118 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVPVYKAANWYEREIWDMFG 177
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 178 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 237
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 238 NSPWEAFPAYRQPPES 253
>gi|119469919|ref|XP_001257997.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Neosartorya fischeri NRRL 181]
gi|119406149|gb|EAW16100.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Neosartorya fischeri NRRL 181]
Length = 285
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ V+ EL++ V ++ + SFL+ F I D+
Sbjct: 71 AESLHKYGQYVMSCLPKYVQQFSVWKDELTIYVPPTGIIPVMSFLKYHTAAEFTQISDIT 130
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS +YN R+RVK E VPS+ +Y GA W+EREV+DM+G
Sbjct: 131 AVDFPTRDQRFEVVYNLLSVRYNSRIRVKTYADEASPVPSVTSLYEGALWYEREVYDMFG 190
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 191 VFFSGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFEG 250
Query: 182 LS-PWEGVN 189
+ WE V
Sbjct: 251 GTAAWEPVG 259
>gi|58037117|ref|NP_080964.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial precursor [Mus musculus]
gi|146345462|sp|Q9DCT2|NDUS3_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
3, mitochondrial; AltName: Full=Complex I-30kD;
Short=CI-30kD; AltName: Full=NADH-ubiquinone
oxidoreductase 30 kDa subunit; Flags: Precursor
gi|26353322|dbj|BAC40291.1| unnamed protein product [Mus musculus]
gi|110831747|gb|AAI19268.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Mus musculus]
gi|110831791|gb|AAI19270.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Mus musculus]
gi|123213328|emb|CAM15313.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Mus musculus]
gi|148695558|gb|EDL27505.1| mCG13496, isoform CRA_a [Mus musculus]
Length = 263
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 91/196 (46%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S + EL + + ++ +FLRD + F ++ DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCLDELEICIHPDGVIPTLTFLRDHTNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+EREVWDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+TG+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 235 NSPWEAFPAYRQPPES 250
>gi|195169573|ref|XP_002025595.1| GL20750 [Drosophila persimilis]
gi|194109088|gb|EDW31131.1| GL20750 [Drosophila persimilis]
Length = 266
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ + EL + + +V + FL+D F N+ID+
Sbjct: 58 TSLSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLIDIA 117
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D R +RF+V+Y+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG
Sbjct: 118 GMDVPCRKHRFEVIYNLLSLRYNARIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYG 177
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 178 VFFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDL 237
Query: 182 LSPWEGVNSLFAKEDSKD 199
+PWE + +
Sbjct: 238 SAPWEQFPNFRNANPPAE 255
>gi|125977414|ref|XP_001352740.1| GA11380 [Drosophila pseudoobscura pseudoobscura]
gi|54641490|gb|EAL30240.1| GA11380 [Drosophila pseudoobscura pseudoobscura]
Length = 266
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ + EL + + +V + FL+D F N+ID+
Sbjct: 58 TSLSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLIDIA 117
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D R +RF+V+Y+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG
Sbjct: 118 GMDVPCRKHRFEVIYNLLSLRYNARIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYG 177
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 178 VFFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDL 237
Query: 182 LSPWEGVNSLFAKEDSKD 199
+PWE + +
Sbjct: 238 SAPWEQFPNFRNANPPAE 255
>gi|315499790|ref|YP_004088593.1| NADH (or f420h2) dehydrogenase, subunit c [Asticcacaulis
excentricus CB 48]
gi|315417802|gb|ADU14442.1| NADH (or F420H2) dehydrogenase, subunit C [Asticcacaulis
excentricus CB 48]
Length = 204
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/203 (48%), Positives = 133/203 (65%), Gaps = 2/203 (0%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M K + + F ++ +++ GEL+L V+ +V + S LR +P F +ID
Sbjct: 1 MSEEKFLKIAEQARADFKDALIDVIHAFGELTLVVERERIVEVLSKLRAEP-YRFHQLID 59
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
LCG D+ R RFDVVYH LS N RLRVK+ E VP++ +YP ADW+ERE +DM
Sbjct: 60 LCGADYPKRERRFDVVYHLLSLTQNLRLRVKVMTDETVPVPTVRSVYPNADWYEREAFDM 119
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+ F G PDLRRILTDYGF GHPLRKDFP+TG VE+ YD++ K+VVY PV+L+QE R +
Sbjct: 120 YGMLFSGQPDLRRILTDYGFSGHPLRKDFPMTGHVEVRYDEEQKRVVYEPVKLVQEFRRF 179
Query: 180 DFLSPWEGVNSLFAKEDSKDDMS 202
DFLSPWEG + + ++ + +
Sbjct: 180 DFLSPWEGASYVLPGDEKAANPN 202
>gi|195376229|ref|XP_002046899.1| GJ12236 [Drosophila virilis]
gi|194154057|gb|EDW69241.1| GJ12236 [Drosophila virilis]
Length = 267
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 85/198 (42%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ S EL + + +V + FL+D F N++D+
Sbjct: 57 TSLSDFGRYVAECLPKYVQKVQLTSGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIA 116
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D R NRF+VVY+ LS ++N R+RVK E + S+ ++ A+W+ERE+WDMYG
Sbjct: 117 GLDVPCRKNRFEVVYNLLSLRFNSRIRVKTYTDELTPLDSVCEVHKAANWYEREIWDMYG 176
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 177 VFFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDL 236
Query: 182 LSPWEGVNSLFAKEDSKD 199
+PWE + + +
Sbjct: 237 SAPWEQFPNFRNANPASE 254
>gi|332259910|ref|XP_003279027.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Nomascus leucogenys]
Length = 266
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 58 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 117
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 118 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 177
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 178 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 237
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 238 NSPWEAFPVYRQPPES 253
>gi|315055913|ref|XP_003177331.1| NADH dehydrogenase iron-sulfur protein 3 [Arthroderma gypseum CBS
118893]
gi|311339177|gb|EFQ98379.1| NADH dehydrogenase iron-sulfur protein 3 [Arthroderma gypseum CBS
118893]
Length = 291
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ G Y+++ ++ EL++ V +V + +FLRD + + D+
Sbjct: 77 SAKLHTYGQYLISCLPKYIQQFSVWKDELTIYVPPAGVVPVMTFLRDHTAAEYTQVSDIT 136
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI +Y GA WFEREV+DM+G
Sbjct: 137 AVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITSLYDGALWFEREVYDMFG 196
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP++G+ E+ YD++ K++V P+EL Q R+++
Sbjct: 197 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLSGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 256
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WEG+ + D+
Sbjct: 257 GSSAWEGIGHGV--DRKPDN 274
>gi|70991843|ref|XP_750770.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Aspergillus fumigatus Af293]
gi|66848403|gb|EAL88732.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Aspergillus fumigatus Af293]
gi|159124332|gb|EDP49450.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Aspergillus fumigatus A1163]
Length = 334
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ V+ EL++ V ++ + SFL+ F I D+
Sbjct: 71 TESLHKYGQYVMSCLPKYVQQFSVWKDELTIYVPPTGIIPVMSFLKYHTAAEFTQISDIT 130
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS +YN R+RVK E VPS+ G+Y GA W+EREV+D++G
Sbjct: 131 AVDFPTRDQRFEVVYNLLSIRYNSRIRVKTYADEASPVPSVTGLYEGALWYEREVYDLFG 190
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 191 VFFSGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFEG 250
Query: 181 FLSPWEGVN 189
+ WE V
Sbjct: 251 GTTAWEPVG 259
>gi|62898071|dbj|BAD96975.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) variant [Homo sapiens]
Length = 264
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 87/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 56 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 116 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP +KDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 176 VFFANHPDLRRILTDYGFEGHPFQKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 235
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 236 NSPWEAFPVYRQPPES 251
>gi|258575169|ref|XP_002541766.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Uncinocarpus
reesii 1704]
gi|237902032|gb|EEP76433.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Uncinocarpus
reesii 1704]
Length = 288
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G Y+++ ++ EL++ + ++ + SFL+D + + D+
Sbjct: 74 SKELHTYGQYLMSCLPKYIQQFSVWKDELTIYIPPAGVIPVISFLKDHTAAEYKQVSDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI +Y GA W+EREV+D++G
Sbjct: 134 AVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITSLYDGAVWYEREVYDLFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 194 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 253
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WE V + D+
Sbjct: 254 GTSAWEQVG--QGTDRKPDN 271
>gi|157817227|ref|NP_001099959.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Rattus norvegicus]
gi|149022595|gb|EDL79489.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 264
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 88/195 (45%), Positives = 126/195 (64%), Gaps = 1/195 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ + EL + + ++ +FL+D + F ++ DL
Sbjct: 56 KRLSAFGEYVAEILPKYVQQVQVTCFDELEICIHPDGVIPTITFLKDHTNAQFKSLADLT 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E ++ SIV ++ A+W+EREVWDM+G
Sbjct: 116 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTAIDSIVSVHIAANWYEREVWDMFG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+TG+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 176 VFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDL 235
Query: 182 LSPWEGVNSLFAKED 196
SPWE + +
Sbjct: 236 NSPWEAFPAYRQPPE 250
>gi|12832533|dbj|BAB22149.1| unnamed protein product [Mus musculus]
Length = 263
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 91/196 (46%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S + EL + + ++ +FLRD + F ++ DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCLDELEICIHPDGVIPTLTFLRDHTNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+EREVWDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+TG+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 235 NSPWEAFPAYRQPPES 250
>gi|320164785|gb|EFW41684.1| mitochondrial complex I subunit NDUFS3 [Capsaspora owczarzaki ATCC
30864]
Length = 272
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 89/185 (48%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++E+ G Y+V+ V+ EL + V ++ + FLRD + F ++D+
Sbjct: 78 KQLEEYGQYLVDVLPKFVQATQVQHTNELEVLVAPEGVLPVLQFLRDHTNAQFKQLLDVA 137
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ R+NRF+VVY+ LS ++N R+RVK E V S +Y A WFERE WD+YG
Sbjct: 138 GVDYPKRTNRFEVVYNLLSLRFNARIRVKTYTDEVTPVESATCLYSSATWFEREAWDLYG 197
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F HPDLRRILTDYGFEGHP+RKDFP+TG+VE YDD++K+VV P+E+ QE R ++F
Sbjct: 198 ILFSNHPDLRRILTDYGFEGHPMRKDFPLTGYVEARYDDELKRVVVEPLEMTQEMRRFEF 257
Query: 182 LSPWE 186
SPWE
Sbjct: 258 QSPWE 262
>gi|297688775|ref|XP_002821850.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Pongo abelii]
Length = 269
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 61 QQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 120
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 121 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFG 180
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 181 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 240
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE +S
Sbjct: 241 NSPWEAFPVYRQPPES 256
>gi|20071222|gb|AAH27270.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Mus musculus]
Length = 263
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 91/196 (46%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S + EL + + ++ +FLRD + F ++ DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCLDELEICIHPDGVIPTLTFLRDHTNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+EREVWDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+TG+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 235 NSPWEAFPAYRQPPES 250
>gi|255725898|ref|XP_002547875.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
gi|240133799|gb|EER33354.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
Length = 277
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G YI++ ++ EL++ V + + FLRD C F +++D+
Sbjct: 63 IEELHKFGTYIMSCLPKYIQQFSVWKDELTIYVAPSAIRPVMLFLRDHTSCQFKSVMDVT 122
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK +E VPSI + GA+W+ERE +D++G
Sbjct: 123 AADYPSRTNRFDVVYNMLSVRHNSRIRVKTYASETSPVPSITPFFNGANWYERETYDLFG 182
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD++ K+V+Y P+EL Q R++
Sbjct: 183 VFFVGHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRVIYEPLELTQAWRNFTV 242
Query: 182 LSP-WEGVNS 190
S WE V
Sbjct: 243 GSSVWEPVGE 252
>gi|326483818|gb|EGE07828.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Trichophyton
equinum CBS 127.97]
Length = 291
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ G Y+++ ++ EL++ V +V + +FLRD + + D+
Sbjct: 77 SAKLHTYGQYLISCLPKYIQQFSVWKDELTIYVPPAGVVPVMTFLRDHTAAEYTQVSDIT 136
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI +Y GA WFEREV+DM+G
Sbjct: 137 AVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITSLYDGALWFEREVYDMFG 196
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP++G+ E+ YD++ K++V P+EL Q R+++
Sbjct: 197 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLSGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 256
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WEG+ + D+
Sbjct: 257 GSSAWEGIG--QGVDRKPDN 274
>gi|51592063|ref|NP_001003921.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Xenopus (Silurana)
tropicalis]
gi|51261601|gb|AAH79960.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) [Xenopus (Silurana)
tropicalis]
gi|68085134|gb|AAH62521.2| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) [Xenopus (Silurana)
tropicalis]
Length = 250
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 88/198 (44%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + GEL + V ++ + +FLRD + F ++ DL
Sbjct: 46 NQLSAFGEYVAEILPKYVQQVQVTCNGELEVMVHPDGVIPVLTFLRDHTNAQFKSLADLT 105
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +++NRF++VY+ LS ++N R+RV E V S V ++ A+W+EREVWDMYG
Sbjct: 106 AVDVPAKTNRFEIVYNLLSLRFNTRMRVMTYTDELTPVESAVPVFEAANWYEREVWDMYG 165
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PV+L QE R +D
Sbjct: 166 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVQLSQEFRKFDL 225
Query: 182 LSPWEGVNSLFAKEDSKD 199
SPWE + + +S
Sbjct: 226 SSPWEAFPAHRQQPESPK 243
>gi|260942471|ref|XP_002615534.1| hypothetical protein CLUG_04416 [Clavispora lusitaniae ATCC 42720]
gi|238850824|gb|EEQ40288.1| hypothetical protein CLUG_04416 [Clavispora lusitaniae ATCC 42720]
Length = 282
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G YI++ ++ EL++ V + + +L++ F +D+
Sbjct: 69 SEELHKFGTYIMSCMPKYIQQFSVWKDELTIYVAPSAIRPVMVYLKNHTPAQFKACMDIT 128
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK +E SVPS+V IY GA+W+EREV+DM+G
Sbjct: 129 AADYPSRANRFDVVYNLLSVRHNSRIRVKTYASETSSVPSVVPIYQGANWYEREVYDMFG 188
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FFEGHPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD++ K+VVY P+EL Q R++
Sbjct: 189 VFFEGHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRVVYEPLELTQAWRNFTV 248
Query: 182 LSP-WEGVN 189
S WE V
Sbjct: 249 GSSVWEQVG 257
>gi|311247859|ref|XP_003122849.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like isoform 1 [Sus scrofa]
Length = 264
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 91/198 (45%), Positives = 125/198 (63%), Gaps = 2/198 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 56 KQLSAFGQYVAEILPKYVQQVQVSCFNELEIFIHPDGVIPVLTFLRDHTNAQFKSLADLT 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 116 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVTVYKAANWYEREIWDMFG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 176 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 235
Query: 182 LSPWEGVN-SLFAKEDSK 198
SPWE ED K
Sbjct: 236 NSPWEAFPAYRQPPEDLK 253
>gi|327306826|ref|XP_003238104.1| NADH-ubiquinone oxidoreductase subunit [Trichophyton rubrum CBS
118892]
gi|326458360|gb|EGD83813.1| NADH-ubiquinone oxidoreductase subunit [Trichophyton rubrum CBS
118892]
Length = 291
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ G Y+++ ++ EL++ + +V + +FLRD + + D+
Sbjct: 77 SAKLHTYGQYLISCLPKYIQQFSVWKDELTIYIPPAGVVPVMTFLRDHTAAEYTQVSDIT 136
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI +Y GA WFEREV+DM+G
Sbjct: 137 AVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITSLYDGALWFEREVYDMFG 196
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP++G+ E+ YD++ K++V P+EL Q R+++
Sbjct: 197 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLSGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 256
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WEG+ + D+
Sbjct: 257 GSSAWEGIG--QGVDRKPDN 274
>gi|301772554|ref|XP_002921693.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 265
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 89/196 (45%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + FLRD + F ++ DL
Sbjct: 57 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLIFLRDHTNAQFKSLADLT 116
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 117 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESTVSVYKAANWYEREIWDMFG 176
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 177 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 236
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 237 NSPWEAFPAYRQPPES 252
>gi|328858908|gb|EGG08019.1| hypothetical protein MELLADRAFT_35287 [Melampsora larici-populina
98AG31]
Length = 224
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + D G Y+ + ++ EL+L +V + FLRD C + ++D+
Sbjct: 21 ISDSLHDYGTYLTSCIPKFIQQFSVYKDELTLYTSPDGIVPVLGFLRDHTQCQYKQLMDI 80
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
G D+ +R RF++VYH LS KY R+RVK E VPS G++ ADW+EREV+DMY
Sbjct: 81 SGADYPTRPKRFEIVYHLLSLKYASRIRVKTYADEVSPVPSATGLFRSADWYEREVYDMY 140
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF+ HPDLRRILTDYGFEG+PLRKDFP+TG+ E+ YD++ K+VVY P++L Q R+++
Sbjct: 141 GVFFQNHPDLRRILTDYGFEGYPLRKDFPLTGYTEVRYDEEKKRVVYEPLQLSQAFRNFE 200
Query: 181 -FLSPWEGVN 189
SPWE
Sbjct: 201 GANSPWEQTG 210
>gi|296479642|gb|DAA21757.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial precursor [Bos taurus]
Length = 251
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 88/188 (46%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 58 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHSNAQFKSLADLT 117
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 118 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVPVYKAANWYEREIWDMFG 177
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 178 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 237
Query: 182 LSPWEGVN 189
SPWE
Sbjct: 238 NSPWEAFP 245
>gi|327259697|ref|XP_003214672.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Anolis carolinensis]
Length = 268
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 88/207 (42%), Positives = 127/207 (61%), Gaps = 10/207 (4%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ + EL + + ++ + +FL+D + F ++ DL
Sbjct: 60 KQLSAFGEYVAEILPKYVQQVQVTCFNELEILIHPDGVIPVLTFLKDHTNAQFKSLADLT 119
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR RF++VY+ LS +YN R+RVK E + S+V ++ ++W+EREVWDMYG
Sbjct: 120 AVDVPSRQYRFEIVYNLLSLRYNSRIRVKTYTDELTPIDSVVPVHQASNWYEREVWDMYG 179
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 180 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELAQEFRKFDL 239
Query: 182 LSPWEGVN---------SLFAKEDSKD 199
SPWE + E +D
Sbjct: 240 NSPWETFPAYRDAPETLKIEPGEKKED 266
>gi|149245542|ref|XP_001527248.1| NADH-ubiquinone oxidoreductase subunit 9 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449642|gb|EDK43898.1| NADH-ubiquinone oxidoreductase subunit 9 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 304
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 123/190 (64%), Gaps = 1/190 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G Y+++ ++ EL++ V + + FL++ F + +D+
Sbjct: 88 IEELHKFGTYLMSCLPKYIQQFSVWKDELTIYVAPSAIQIVSLFLKNHTSAQFKSCMDVT 147
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK E +VPS+ IY GA+W+ERE +D++G
Sbjct: 148 AADYPSRTNRFDVVYNLLSVRHNSRIRVKTYANETSAVPSVTSIYHGANWYERETYDLFG 207
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD++ K+VVY P+EL Q R++
Sbjct: 208 VFFTGHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRVVYEPLELTQAWRNFTV 267
Query: 182 LSP-WEGVNS 190
S WE V
Sbjct: 268 GSSVWEQVGE 277
>gi|195587367|ref|XP_002083436.1| GD13354 [Drosophila simulans]
gi|194195445|gb|EDX09021.1| GD13354 [Drosophila simulans]
Length = 265
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ D G Y+ V+ + EL + + +V + FL+D F N++D+ GV
Sbjct: 60 LSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGV 119
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D R NRF+VVY+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+F
Sbjct: 120 DVPCRKNRFEVVYNLLSLRYNSRIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVF 179
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D +
Sbjct: 180 FANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSA 239
Query: 184 PWEGVNSLFAKEDSKD 199
PWE + +
Sbjct: 240 PWEQFPNFRNANPPAE 255
>gi|89272859|emb|CAJ82146.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Xenopus (Silurana)
tropicalis]
Length = 250
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 88/198 (44%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + GEL + V ++ + +FLRD + F ++ DL
Sbjct: 46 NQLSAFGEYVAEILPKYVQQVQVTCNGELEVMVHPDGVIPVLTFLRDHTNAQFKSLADLT 105
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +++NRF++VY+ LS ++N R+RV E V S V ++ A+W+EREVWDMYG
Sbjct: 106 AVDVPAKTNRFEIVYNLLSLRFNTRMRVMTYTDELTPVESAVPVFEAANWYEREVWDMYG 165
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PV+L QE R +D
Sbjct: 166 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVQLSQEFRKFDL 225
Query: 182 LSPWEGVNSLFAKEDSKD 199
SPWE + + +S
Sbjct: 226 SSPWEAFPAHRQQPESPK 243
>gi|195337045|ref|XP_002035143.1| GM14080 [Drosophila sechellia]
gi|194128236|gb|EDW50279.1| GM14080 [Drosophila sechellia]
Length = 265
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ D G Y+ V+ + EL + + +V + FL+D F N++D+ GV
Sbjct: 60 LSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGV 119
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D R NRF+VVY+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+F
Sbjct: 120 DVPCRKNRFEVVYNLLSLRYNSRIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVF 179
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D +
Sbjct: 180 FANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSA 239
Query: 184 PWEGVNSLFAKEDSKD 199
PWE + +
Sbjct: 240 PWEQFPNFRNANPPAE 255
>gi|226437575|ref|NP_001139804.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial precursor [Gallus gallus]
Length = 257
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 88/195 (45%), Positives = 125/195 (64%), Gaps = 1/195 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ ++ + EL L + ++ + +FLRD + F ++ DL
Sbjct: 49 KQLCAFGEYVAEILPKYIQQVQVTCFNELELLIHPDGIIPVLTFLRDHTNAQFKSLADLT 108
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR RF++VY+ LS ++N R+RVK E + S V ++ A+W+EREVWDMYG
Sbjct: 109 AVDVPSRQYRFEIVYNLLSLRFNSRIRVKTYTDELTPIDSAVSVHKAANWYEREVWDMYG 168
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 169 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELSQEFRKFDL 228
Query: 182 LSPWEGVNSLFAKED 196
SPWE + A +
Sbjct: 229 NSPWEAFPAYRAPPE 243
>gi|332185776|ref|ZP_08387523.1| NADH-ubiquinone oxidoreductase chain C [Sphingomonas sp. S17]
gi|332014134|gb|EGI56192.1| NADH-ubiquinone oxidoreductase chain C [Sphingomonas sp. S17]
Length = 265
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 118/185 (63%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ + A VGE++L VD +LV LRD + ++++ GVD+ R RF
Sbjct: 6 RAALGPWLVDAREHVGEVALVVDRVNLVPAMIALRDTKGLEYQQLMEIAGVDYPERDERF 65
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY LS N RL V + E K VPS+ G++P A W EREV+D+YG+ F G+ DLRR
Sbjct: 66 EVVYCLLSLTRNHRLHVHVCTDEDKPVPSVTGLWPVAGWLEREVYDLYGVLFSGNSDLRR 125
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLF 192
ILTDYGF GHPLRKDFP+TG+ EL Y ++ K+VVY PV+L Q+ R++DF SPWEG +
Sbjct: 126 ILTDYGFRGHPLRKDFPLTGYTELRYSEEEKRVVYEPVKLAQDFRNFDFQSPWEGAEYVL 185
Query: 193 AKEDS 197
++
Sbjct: 186 PGDEK 190
>gi|224051044|ref|XP_002198697.1| PREDICTED: NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) [Taeniopygia guttata]
Length = 278
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 87/195 (44%), Positives = 124/195 (63%), Gaps = 1/195 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ ++ + EL L + ++ + +FLRD + F ++ DL
Sbjct: 70 KQLCAFGEYVAEILPKYIQQVQVTCFNELELLIHPDGIIPVLTFLRDHTNAQFKSLADLT 129
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR RF++VY+ LS ++N R+RVK E + S V ++ A+W+EREVWDMYG
Sbjct: 130 AVDVPSRQYRFEIVYNLLSLRFNSRIRVKTYTDELTPIDSAVPVHKAANWYEREVWDMYG 189
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 190 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELAQEFRKFDL 249
Query: 182 LSPWEGVNSLFAKED 196
SPWE + +
Sbjct: 250 NSPWEAFPAYRPPPE 264
>gi|167516306|ref|XP_001742494.1| NADH dehydrogenase Fe S [Monosiga brevicollis MX1]
gi|163779118|gb|EDQ92732.1| NADH dehydrogenase Fe S [Monosiga brevicollis MX1]
Length = 206
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 94/188 (50%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++E LG +I V+ A + EL L + + + +FLRD C F N+ DLC
Sbjct: 8 ERLEKLGQHIAEMLPRYVQVAQVTAHDELELLIAPSGVKPVLTFLRDHTACQFKNLSDLC 67
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD R RF+VVY+ LS N R+RV+ E V SIV I+ ADW+ERE WDMYG
Sbjct: 68 AVDVPRREKRFEVVYNLLSVHLNERIRVRTYCDELTPVDSIVDIHMAADWYEREAWDMYG 127
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F GHPDLRRILTDYGFEGHPLRKDFP++GFVE+ YD+ VK+VV P+EL QE R ++
Sbjct: 128 VYFLGHPDLRRILTDYGFEGHPLRKDFPLSGFVEVRYDEDVKRVVCEPLELAQEFRKFEL 187
Query: 182 LSPWEGVN 189
SPW+ +
Sbjct: 188 QSPWQQIP 195
>gi|195012914|ref|XP_001983773.1| GH16082 [Drosophila grimshawi]
gi|193897255|gb|EDV96121.1| GH16082 [Drosophila grimshawi]
Length = 261
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ S EL + + +V + FL+D F N++D+
Sbjct: 57 TSLSDFGRYVAECMPKYVQKVQLTSGDELEILIAPEGIVPVLQFLKDHHQAQFTNLVDIA 116
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D R +RF+V+Y+ LS ++N R+RVK E + S ++ A+W+ERE+WDMYG
Sbjct: 117 GMDVPCRQHRFEVIYNLLSLRFNARIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYG 176
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 177 VFFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDL 236
Query: 182 LSPWEGVNSLFAKEDSKD 199
+PWE + +
Sbjct: 237 SAPWEQFPNFRNANPPAE 254
>gi|121699646|ref|XP_001268091.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Aspergillus clavatus NRRL 1]
gi|119396233|gb|EAW06665.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Aspergillus clavatus NRRL 1]
Length = 286
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ V+ EL++ V ++ + +FL+ + I D+
Sbjct: 72 AEGLHKYGQYVMSCLPKYVQQFSVWKDELTIYVPPSGIIPVMTFLKYHTAAEYTQISDIT 131
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS +YN R+RVK E VPS+ G++ GA W+EREV+DM+G
Sbjct: 132 AVDFPTRDQRFEVVYNMLSVRYNSRIRVKTYADEASPVPSVTGLFEGALWYEREVYDMFG 191
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 192 VFFSNHPDLRRIMTDYGFDGHPLRKDFPLTGYTEVRYDEEKKRIVIEPLELTQAFRNFEG 251
Query: 182 LS-PWEGVNSLFAKEDSKDD 200
+ WE V D D
Sbjct: 252 GTVAWEPVG---PGNDRTPD 268
>gi|291243572|ref|XP_002741672.1| PREDICTED: NADH dehydrogenase iron-sulfur protein 3,
mitochondrial-like [Saccoglossus kowalevskii]
Length = 257
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 90/184 (48%), Positives = 126/184 (68%), Gaps = 1/184 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ D G Y+ + ++ + EL L + +V + +FL+D +C F NI D+
Sbjct: 52 TLSDFGRYVADCLPKYIQLVQVTHYNELELMIHPEGVVPVMTFLKDHHNCQFKNISDITA 111
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+D +R NRF+++Y+ LS +YN R+RVK E + SIV ++ GADW+EREVWDMYG+
Sbjct: 112 IDVPTRENRFEIIYNILSLRYNSRIRVKTYTDELTPIDSIVSVHKGADWYEREVWDMYGV 171
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD+VK++V P+EL QE R +D
Sbjct: 172 FFANHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDEVKRIVVEPLELSQEFRKFDLS 231
Query: 183 SPWE 186
+PWE
Sbjct: 232 TPWE 235
>gi|310799531|gb|EFQ34424.1| NADH dehydrogenase [Glomerella graminicola M1.001]
Length = 286
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +I+ V+ EL++ V ++ + +FL+ + F I D+
Sbjct: 72 AENLHKYGSWIMGCLPKYVQQISVWKDELTIYVSPSGIIPIMTFLKYNTSAEFTQISDIT 131
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ +R RF+V+Y+ LS ++N R+RVK E VPS+ ++ GA+W+EREV+D++G
Sbjct: 132 AVDYPTRDQRFEVIYNLLSVRHNSRIRVKTYADEASPVPSVTPLFDGANWYEREVYDLFG 191
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF HPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 192 VFFTDHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRYDEEKKRIVTEPLELTQAFRNFEG 251
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
S WE V D + D
Sbjct: 252 GSSAWEQVG---PGTDRRPDT 269
>gi|149022594|gb|EDL79488.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 299
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 88/195 (45%), Positives = 126/195 (64%), Gaps = 1/195 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ + EL + + ++ +FL+D + F ++ DL
Sbjct: 91 KRLSAFGEYVAEILPKYVQQVQVTCFDELEICIHPDGVIPTITFLKDHTNAQFKSLADLT 150
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E ++ SIV ++ A+W+EREVWDM+G
Sbjct: 151 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTAIDSIVSVHIAANWYEREVWDMFG 210
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+TG+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 211 VFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDL 270
Query: 182 LSPWEGVNSLFAKED 196
SPWE + +
Sbjct: 271 NSPWEAFPAYRQPPE 285
>gi|312221820|emb|CBY01760.1| similar to NADH-ubiquinone oxidoreductase 30.4 kDa subunit
[Leptosphaeria maculans]
Length = 289
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ ++ EL++ + ++ +FL+ + I D+
Sbjct: 74 SEALHKYGQYLMSCLPKYIQQFSVWKDELTIYIPPSGVIPTFTFLKYHTAAEYTQITDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ ++ RF+VVY+ LS ++N RLRVK E VPS+ +Y GA+W+EREV+D++G
Sbjct: 134 AVDYPTKDQRFEVVYNMLSIRHNSRLRVKTYADEATPVPSLCDLYDGANWYEREVYDLFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY-D 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q R++
Sbjct: 194 VFFVGHPDLRRIMTDYGFDGHPLRKDFPMTGYTEIRYDEEKKRIVQEPLEMTQAFRNFRG 253
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WE V +D+K D
Sbjct: 254 GSSAWEQVG---PGDDAKPD 270
>gi|319405696|emb|CBI79319.1| NADH dehydrogenase I chain C [Bartonella sp. AR 15-3]
Length = 202
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/191 (52%), Positives = 134/191 (70%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + +L +Y+ ++ + ++ GEL++ + + F+RDD C F++IID+
Sbjct: 1 MSKTLVELSNYLKDNLGDKIEESIFEFGELTIVSRLDAITDVLMFVRDDTRCQFISIIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RFDV Y LSP+YN RLR+K+ E +V S IYPGA+W+ERE +DMY
Sbjct: 61 SGVDYPSREKRFDVSYQLLSPRYNLRLRIKVRTDENVAVASACSIYPGAEWYEREAYDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F GHPDLRRILTDYGFEGHPLRKDFPVTGFVE YD++ K+V+Y P+ L QE R++D
Sbjct: 121 GILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNETKRVIYEPIILRQEMRNFD 180
Query: 181 FLSPWEGVNSL 191
FLSPWEG +
Sbjct: 181 FLSPWEGNEHV 191
>gi|149632743|ref|XP_001513308.1| PREDICTED: similar to NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial precursor (NADH-ubiquinone
oxidoreductase 30 kDa subunit) (Complex I-30kD)
(CI-30kD) [Ornithorhynchus anatinus]
Length = 300
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 88/195 (45%), Positives = 125/195 (64%), Gaps = 1/195 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FL+D + F ++ DL
Sbjct: 92 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLKDHTNAQFKSLADLT 151
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 152 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVTVYKAANWYEREIWDMFG 211
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 212 VFFFNHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 271
Query: 182 LSPWEGVNSLFAKED 196
SPWE + D
Sbjct: 272 NSPWEAFPAYRQAAD 286
>gi|296823464|ref|XP_002850449.1| NADH-ubiquinone oxidoreductase kDa subunit [Arthroderma otae CBS
113480]
gi|238838003|gb|EEQ27665.1| NADH-ubiquinone oxidoreductase kDa subunit [Arthroderma otae CBS
113480]
Length = 291
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 86/200 (43%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ G Y+++ ++ EL++ V +V + +FLRD + + D+
Sbjct: 77 SAKLHTYGQYLISCLPRYIQQFSVWKDELTIYVPPAGVVPVMTFLRDHTAAEYTQVSDIT 136
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI +Y GA WFEREV+DM+G
Sbjct: 137 AVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITSLYDGALWFEREVYDMFG 196
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP++G+ E+ YD++ K++V P+EL Q R+++
Sbjct: 197 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLSGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 256
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WEGV + D+
Sbjct: 257 GSSAWEGVGQGL--DRKPDN 274
>gi|87200315|ref|YP_497572.1| NADH (or F420H2) dehydrogenase, subunit C [Novosphingobium
aromaticivorans DSM 12444]
gi|123488913|sp|Q2G5Y5|NUOC_NOVAD RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|87135996|gb|ABD26738.1| NADH dehydrogenase subunit C [Novosphingobium aromaticivorans DSM
12444]
Length = 309
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 84/188 (44%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D +V + V + GE+ L V + LRDD + ++D+ GVD+ R+
Sbjct: 18 DTLVAALGDMVAASREEHGEILLTVVRDRVEDALRLLRDDHE--YQQLMDIAGVDYPQRA 75
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
RFDV Y LS N R+ VK++ E VP++ ++P A W+EREV+DM+G+ F G+PD
Sbjct: 76 ERFDVCYCLLSVTKNHRVIVKVSTDEATPVPTVTTLWPNAGWYEREVYDMFGVLFAGNPD 135
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVN 189
LRRILTDYGF+GHP RKDFP+TG+VEL Y ++ K+VVY PV+L Q+ R +DF+SPWEG +
Sbjct: 136 LRRILTDYGFQGHPFRKDFPLTGYVELRYSEEDKRVVYEPVQLAQDLRQFDFMSPWEGAD 195
Query: 190 SLFAKEDS 197
+ ++
Sbjct: 196 YVLPGDEK 203
>gi|148224598|ref|NP_001088497.1| hypothetical protein LOC495365 [Xenopus laevis]
gi|54311248|gb|AAH84829.1| LOC495365 protein [Xenopus laevis]
Length = 250
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + GEL + V ++ + FLRD + F ++ DL
Sbjct: 46 NQLSAFGEYVAEIMPKYVQQVQVTCNGELEVMVHPDGVIPVLVFLRDHTNAQFKSLADLT 105
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R+NRF++VY+ LS ++N R+RVK E + S V ++ A+W+EREVWDMYG
Sbjct: 106 AVDIPARTNRFEIVYNLLSLRFNSRMRVKTYADELTPIESAVPVFQAANWYEREVWDMYG 165
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PV+L QE R +D
Sbjct: 166 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVQLSQEFRKFDL 225
Query: 182 LSPWEGVNSLFAKEDSKD 199
SPWE + + +S
Sbjct: 226 SSPWEAFPAHRQQPESPK 243
>gi|58257421|gb|AAW69332.1| NADH-ubiquinone oxidoreductase-like protein [Magnaporthe grisea]
Length = 291
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G ++++ V+ EL++ + ++ + +FL+ + F + D+
Sbjct: 77 AENLHRYGQWLMSCLPKYVQQFSLWKDELTIYICPSGVIPVFNFLKYNTSAEFTTVSDIT 136
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF++VY+ LS ++N R+RVK E VPSI IY GA+W+EREV+DM+G
Sbjct: 137 AVDFPTRDQRFEIVYNLLSVRHNARIRVKTYADEASPVPSICSIYDGANWYEREVYDMFG 196
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 197 VFFVGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEVRYDEEKKRIVTEPLELTQAFRNFEG 256
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WE V D +
Sbjct: 257 GSSAWEQVG---PGNDRTPE 273
>gi|320588831|gb|EFX01299.1| NADH-ubiquinone oxidoreductase subunit precursor [Grosmannia
clavigera kw1407]
Length = 296
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 83/195 (42%), Positives = 124/195 (63%), Gaps = 1/195 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + G ++++ V+ EL++ + ++ + +FL+ + F I D+
Sbjct: 81 MADNMHRYGAWLMSVLPKYVQQFSVWKDELTIYIPPSGVIPVFTFLKYNTSAEFTQISDI 140
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VDF +R RF++VY+ LS ++N R+RVK E VPS+ +Y GA+W+EREV+DM+
Sbjct: 141 TAVDFPTRDQRFEIVYNLLSVRHNSRIRVKTYADEASPVPSVTSLYDGANWYEREVYDMF 200
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRI+TDYGFEGHPLRKDFPVTG+ EL YD++ K++V P+EL Q R+++
Sbjct: 201 GVFFVDHPDLRRIMTDYGFEGHPLRKDFPVTGYTELRYDEEKKRIVTEPLELTQAFRNFE 260
Query: 181 -FLSPWEGVNSLFAK 194
S WE V + K
Sbjct: 261 GGSSSWEQVGAGLDK 275
>gi|164656983|ref|XP_001729618.1| hypothetical protein MGL_3162 [Malassezia globosa CBS 7966]
gi|159103511|gb|EDP42404.1| hypothetical protein MGL_3162 [Malassezia globosa CBS 7966]
Length = 275
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 90/190 (47%), Positives = 123/190 (64%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D G ++++ ++ EL+ V L+ +FLRD F ++D+
Sbjct: 62 MQGPLHDYGSWVLSVLPRFIQQFSVYKDELTFYVAPAGLIPTMTFLRDHTLTQFKVLMDI 121
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
G D+ +RS RF+V YH LS + N R+RVK E VP++ ++ ADWFERE WDMY
Sbjct: 122 SGADYPTRSQRFEVNYHLLSIRNNARIRVKTYADEVTPVPTVTSLFRSADWFEREAWDMY 181
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GIFF GHPDLRRILTDYGFEGHPLRKDFP+TG+ E+ +D++ K+VVY PV+LMQ HR+++
Sbjct: 182 GIFFAGHPDLRRILTDYGFEGHPLRKDFPLTGYTEVRWDEEKKRVVYEPVQLMQAHRNFE 241
Query: 181 FLSPWEGVNS 190
S WE V
Sbjct: 242 PASAWEQVGE 251
>gi|294011309|ref|YP_003544769.1| NADH dehydrogenase I chain C [Sphingobium japonicum UT26S]
gi|292674639|dbj|BAI96157.1| NADH dehydrogenase I chain C [Sphingobium japonicum UT26S]
Length = 297
Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats.
Identities = 85/197 (43%), Positives = 123/197 (62%), Gaps = 2/197 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I+ + I + V+ ELS V L LRD + ++++
Sbjct: 8 IATIDGIAQEIAGLLGSMLVETVDHADELSFTVVREKLADAMVLLRD--KAQYQQLMEIA 65
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ R RF+V YH LS N R+RVK++ E + VP++ I+P A W EREV+DMYG
Sbjct: 66 GVDYPERPERFEVCYHLLSVTRNHRVRVKVSTDEDRPVPTVTHIWPVAGWLEREVFDMYG 125
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ FEG+ DLRRILTDYGF+GHP RKDFP+TG+VE+ Y ++ K+VVY+PV+L Q+ R++DF
Sbjct: 126 VIFEGNADLRRILTDYGFKGHPQRKDFPLTGYVEMWYSEEDKRVVYKPVKLAQDFRNFDF 185
Query: 182 LSPWEGVNSLFAKEDSK 198
+SPWEG + ++
Sbjct: 186 MSPWEGAQYVLPGDEKA 202
>gi|297493932|gb|ADI40688.1| NADH dehydrogenase Fe-S protein 3, 30kDa [Cynopterus sphinx]
Length = 218
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 87/188 (46%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 30 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHSNAQFKSLADLT 89
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 90 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESTVSVHKAANWYEREIWDMFG 149
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 150 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 209
Query: 182 LSPWEGVN 189
SPWE
Sbjct: 210 NSPWEAFP 217
>gi|225714070|gb|ACO12881.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Lepeophtheirus salmonis]
gi|290562133|gb|ADD38463.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial
[Lepeophtheirus salmonis]
Length = 266
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 90/202 (44%), Positives = 131/202 (64%), Gaps = 1/202 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + ++D G Y+ V+ + EL + + +V + SFL+D + F N++D
Sbjct: 57 MRQNLQDFGQYVAECMPKYVQKIQLTAGDELEVLIHPDGVVPVMSFLKDHHNAQFTNLVD 116
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
LCG+D +R RF+++Y+ LS +YN R+RVK E + SIV I+ A+W+EREVWDM
Sbjct: 117 LCGMDVPTRKYRFEIIYNLLSLRYNSRIRVKTYTDELTPIDSIVEIHKAANWYEREVWDM 176
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+G++F HPDLRRILTDYGFEGHPLRKDFP+TGF EL YD + ++VV PVEL QE+R +
Sbjct: 177 FGVYFSNHPDLRRILTDYGFEGHPLRKDFPLTGFYELRYDMEHQRVVQEPVELAQEYRKF 236
Query: 180 DFLSPWEGVNSLFAKEDSKDDM 201
D +PWE + + +++
Sbjct: 237 DLAAPWEQFPNFREPLKAAEEV 258
>gi|170055789|ref|XP_001863738.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial [Culex
quinquefasciatus]
gi|167875613|gb|EDS38996.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial [Culex
quinquefasciatus]
Length = 491
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 86/201 (42%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ S EL + + +V + FL+D F N++D+
Sbjct: 284 ADLSDFGKYVAECMPKYVQKVQLTSGDELEVLIAPEGVVPVLQFLKDHHQAQFANLVDIA 343
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D SR RF+V+Y+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG
Sbjct: 344 GMDVPSRQYRFEVIYNILSLRYNSRIRVKTYTDELTPIDSCNEVFKAANWYEREIWDMYG 403
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP+TG+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 404 VFFANHPDLRRILTDYGFEGHPQRRDFPLTGYVELRYDDEKKRVVCEPLELAQEFRKFDL 463
Query: 182 LSPWEGVNSLFAKEDSKDDMS 202
+PWE + + ++++
Sbjct: 464 SAPWEQFPNFRNANPATEEIA 484
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 116/183 (63%), Gaps = 1/183 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ S EL + + +V + FL+D F N++D+
Sbjct: 32 ADLSDFGKYVAECMPKYVQKVQLTSGDELEVLIAPEGVVPVLQFLKDHHQAQFANLVDIA 91
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D SR RF+V+Y+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG
Sbjct: 92 GMDVPSRQYRFEVIYNILSLRYNSRIRVKTYTDELTPIDSCNEVFKAANWYEREIWDMYG 151
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP+TG+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 152 VFFANHPDLRRILTDYGFEGHPQRRDFPLTGYVELRYDDEKKRVVCEPLELAQEFRKFDL 211
Query: 182 LSP 184
+P
Sbjct: 212 SAP 214
>gi|297493934|gb|ADI40689.1| NADH dehydrogenase Fe-S protein 3, 30kDa [Rousettus leschenaultii]
Length = 214
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FL+D + F ++ DL
Sbjct: 30 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLKDHSNAQFKSLADLT 89
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V ++ A+W+ERE+WDM+G
Sbjct: 90 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESTVSVHKAANWYEREIWDMFG 149
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 150 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 209
Query: 182 LSPWE 186
SPWE
Sbjct: 210 NSPWE 214
>gi|67522543|ref|XP_659332.1| hypothetical protein AN1728.2 [Aspergillus nidulans FGSC A4]
gi|40744858|gb|EAA64014.1| hypothetical protein AN1728.2 [Aspergillus nidulans FGSC A4]
Length = 836
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI+ V+ EL + V ++ +FL+ F + D+
Sbjct: 76 ADSLHQYGQYIMACLPKHVQQFSVWKDELCIYVPPSGIIPTFTFLKYHTSAEFTTVSDIT 135
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ ++ RF+VVY+ LS +YN R+RVK E VPSI G+Y GA W+EREV+D++G
Sbjct: 136 AVDYPTKDQRFEVVYNLLSVRYNSRIRVKTYADEASPVPSITGLYEGALWYEREVYDLFG 195
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 196 VFFTGHPDLRRIMTDYGFDGHPLRKDFPMTGYTELRYDEEKKRIVIEPLELTQAFRNFEG 255
Query: 181 FLSPWEGVN 189
+ WE V
Sbjct: 256 GTTAWEPVG 264
>gi|194865281|ref|XP_001971351.1| GG14478 [Drosophila erecta]
gi|190653134|gb|EDV50377.1| GG14478 [Drosophila erecta]
Length = 265
Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ D G Y+ V+ + EL + + +V + FL+D F N++D+ GV
Sbjct: 60 LSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGV 119
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D R NRF+VVY+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+F
Sbjct: 120 DVPCRKNRFEVVYNLLSLRYNSRIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVF 179
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D +
Sbjct: 180 FANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSA 239
Query: 184 PWEGVNSLFAKEDSKD 199
PWE + +
Sbjct: 240 PWEQFPNFRNANPPAE 255
>gi|315122724|ref|YP_004063213.1| NADH dehydrogenase subunit C [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496126|gb|ADR52725.1| NADH dehydrogenase subunit C [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 198
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 154/198 (77%), Positives = 172/198 (86%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ED+GDYIVNSF SVR +NSVGELSLDVDCGDL+SLC FLRDD +C FVNI+DLCGVD
Sbjct: 1 MEDIGDYIVNSFGRSVRSTINSVGELSLDVDCGDLLSLCYFLRDDSNCRFVNIVDLCGVD 60
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
FLSRS+RFDVVYHFLSPKYN R+RVK+AV+EG S+PS+V +YP A+WFEREV DMYGI F
Sbjct: 61 FLSRSSRFDVVYHFLSPKYNCRVRVKVAVSEGDSIPSMVEVYPAANWFEREVLDMYGIKF 120
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
EGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL YDDK KKVVY PVELMQE+RDYDFLSP
Sbjct: 121 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELRYDDKAKKVVYSPVELMQEYRDYDFLSP 180
Query: 185 WEGVNSLFAKEDSKDDMS 202
WEG K+ ++S
Sbjct: 181 WEGSPLFADKDSENGNVS 198
>gi|209738000|gb|ACI69869.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Salmo salar]
Length = 255
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 91/185 (49%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + EL + + ++ + +FLRD + F N+IDL
Sbjct: 49 NQLAAFGEYVAEMLPKYVQQVQVTCYNELEVMIHPDGVIPVLTFLRDHSNAQFRNMIDLT 108
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS +YN R+R+K E V S V ++ A+W+EREVWDMYG
Sbjct: 109 AVDIPTRQNRFEIVYNLLSLRYNSRIRLKTYTDELTPVDSSVSVHNAANWYEREVWDMYG 168
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++GFVE+ YDD+VK+VV PVEL QE R +D
Sbjct: 169 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGFVEVRYDDEVKRVVAEPVELSQEFRKFDL 228
Query: 182 LSPWE 186
SPWE
Sbjct: 229 NSPWE 233
>gi|148223905|ref|NP_001088888.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase) [Xenopus laevis]
gi|56789788|gb|AAH88695.1| LOC496233 protein [Xenopus laevis]
Length = 250
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 90/198 (45%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + GEL + V ++ + FLRD + F ++ DL
Sbjct: 46 NQLSAFGEYVAEIMPKYVQQVQVTCNGELEVMVHPDGVIPVLIFLRDHTNAQFKSLADLT 105
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R+NRF++VY+ LS ++N R+RVK E V S V ++ A+W+EREVWDMYG
Sbjct: 106 AVDIPARTNRFEIVYNLLSLRFNSRMRVKTYTDELTPVESSVPVFQAANWYEREVWDMYG 165
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PV+L QE R +D
Sbjct: 166 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVQLSQEFRKFDL 225
Query: 182 LSPWEGVNSLFAKEDSKD 199
SPWE + + +S
Sbjct: 226 SSPWEAFPAHRQQPESPK 243
>gi|254572834|ref|XP_002493526.1| hypothetical protein [Pichia pastoris GS115]
gi|238033325|emb|CAY71347.1| Hypothetical protein PAS_chr4_0120 [Pichia pastoris GS115]
gi|308152246|emb|CBI83542.1| NUGM (30 kDa) subunit of mitochondrial NADH:ubiquinone
oxidoreductase (complex I) [Pichia pastoris]
gi|328354650|emb|CCA41047.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Pichia pastoris CBS
7435]
Length = 289
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G YI+ V+ EL + V L + +FL+D F +D+
Sbjct: 74 IEELHKFGRYIMGCLPKFVQQFSVWKDELVIYVAPSALTQVATFLKDHTSAQFKACMDVT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ +R+NRFDVVY+ LS ++N R+R+K +E VPS+V ++ GA+WFERE +D++G
Sbjct: 134 AADYPTRTNRFDVVYNLLSVRHNSRIRIKTYASEVSPVPSVVPLFQGANWFERETYDLFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFFEGHPDLRRI+TDYGF+GHPLRKDFP TG+ E+ YD + ++VVY P+EL Q R++
Sbjct: 194 IFFEGHPDLRRIMTDYGFQGHPLRKDFPTTGYTEVRYDAEKRRVVYEPLELTQAWRNFTV 253
Query: 182 LSP-WEGVN 189
S WE V
Sbjct: 254 GSSVWEQVG 262
>gi|417393|sp|Q00673|NDUS3_CANMA RecName: Full=Probable NADH-ubiquinone oxidoreductase 30.4 kDa
subunit, mitochondrial; AltName: Full=Alkane-inducible
protein 1; AltName: Full=CI-31kD; AltName: Full=Complex
I-30kD; Flags: Precursor
gi|170908|gb|AAA34360.1| alkane-inducible protein [Candida maltosa]
gi|740338|prf||2005210B alkaline-inducible peroxisomal protein
Length = 276
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 82/190 (43%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G YI++ ++ EL++ V + + S+L++ C F ++D+
Sbjct: 63 IEELHKFGTYIMSCLPKYIQQFSVWKDELTIYVAPSAIRPVMSYLKNHTSCQFKAVMDIT 122
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK E VPS+ ++ GA+W+ERE +D++G
Sbjct: 123 AADYPSRTNRFDVVYNLLSDRHNSRIRVKTYANETSPVPSVTPLFNGANWYERETYDLFG 182
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD++ K+V+Y P+EL Q R++
Sbjct: 183 VFFVGHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRVIYEPLELTQAWRNFTV 242
Query: 182 LSP-WEGVNS 190
S WE V
Sbjct: 243 GSSVWEPVGE 252
>gi|302843459|ref|XP_002953271.1| NADH:ubiquinone oxidoreductase 30 kDa subunit [Volvox carteri f.
nagariensis]
gi|300261368|gb|EFJ45581.1| NADH:ubiquinone oxidoreductase 30 kDa subunit [Volvox carteri f.
nagariensis]
Length = 285
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 96/187 (51%), Positives = 123/187 (65%), Gaps = 7/187 (3%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVG-------ELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
L DYI+ + V+ AV G E ++ L+ L +FLRD F +ID
Sbjct: 95 QLTDYIIKTVPKFVKMAVVGPGQSTLLYQEPTIYTTPDSLLPLMTFLRDHVQTQFKCLID 154
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VDF R+ RF+VVYH LSP++N R+RVK+ V E VPSI I+ A+WFERE WDM
Sbjct: 155 ITAVDFPERAARFEVVYHLLSPRWNNRIRVKVCVDEVTPVPSIWKIFNTANWFERETWDM 214
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+G+FF GHPDLRRIL+DYGF GHPLRKDFP++G+ E+ YD K+VV P+EL QE R +
Sbjct: 215 FGVFFSGHPDLRRILSDYGFTGHPLRKDFPLSGYTEVRYDYGKKRVVSEPLELTQEFRYF 274
Query: 180 DFLSPWE 186
DF SPWE
Sbjct: 275 DFNSPWE 281
>gi|241736746|ref|XP_002413990.1| NADH-ubiquinone oxidoreductase, NDUFS3/30 kDa subunit, putative
[Ixodes scapularis]
gi|215507844|gb|EEC17298.1| NADH-ubiquinone oxidoreductase, NDUFS3/30 kDa subunit, putative
[Ixodes scapularis]
Length = 268
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 91/198 (45%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+K+ED G Y+ V+ + G EL + + +V + SFL+D + + NI+D+
Sbjct: 57 QKLEDFGRYVAECLPKYVQKVQITQGDELEVMIAPEGVVPVLSFLKDHHNAQYANIVDIA 116
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD +R RF+VVY+ LS +N R+RVK E ++ S +Y GA+W+EREVWDM+G
Sbjct: 117 GVDVPTRQYRFEVVYNLLSLHFNSRIRVKTYTDELTALDSATPVYKGANWYEREVWDMFG 176
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV P+EL QE+R +D
Sbjct: 177 VFFGNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVVEPLELTQEYRKFDL 236
Query: 182 LSPWEGVNSLFAKEDSKD 199
+PWE + +++
Sbjct: 237 ATPWETFPKFRSGGAAEE 254
>gi|24656494|ref|NP_647775.1| CG12079 [Drosophila melanogaster]
gi|7292316|gb|AAF47723.1| CG12079 [Drosophila melanogaster]
gi|21428482|gb|AAM49901.1| LD25561p [Drosophila melanogaster]
gi|40882445|gb|AAR96134.1| RH59487p [Drosophila melanogaster]
gi|220944318|gb|ACL84702.1| CG12079-PA [synthetic construct]
gi|220954090|gb|ACL89588.1| CG12079-PA [synthetic construct]
Length = 265
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ D G Y+ V+ + EL + + +V + FL+D F N++D+ GV
Sbjct: 60 LSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGV 119
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D R NRF+VVY+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+F
Sbjct: 120 DVPCRKNRFEVVYNLLSLRYNSRIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVF 179
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D +
Sbjct: 180 FANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSA 239
Query: 184 PWEGVNSLFAKEDSKD 199
PWE + +
Sbjct: 240 PWEQFPNFRNANPPAE 255
>gi|195126120|ref|XP_002007522.1| GI12345 [Drosophila mojavensis]
gi|193919131|gb|EDW17998.1| GI12345 [Drosophila mojavensis]
Length = 267
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 85/197 (43%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ + G Y+ V+ S EL + + +V + FL+D F N++D+ G
Sbjct: 58 SLSEFGRYVAECMPKYVQKVQLTSGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAG 117
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD R RF+VVY+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+
Sbjct: 118 VDVPCRKYRFEVVYNILSLRYNARIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGV 177
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 178 FFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLS 237
Query: 183 SPWEGVNSLFAKEDSKD 199
+PWE + +
Sbjct: 238 APWEQFPNFRNANPPAE 254
>gi|195492783|ref|XP_002094139.1| GE21665 [Drosophila yakuba]
gi|194180240|gb|EDW93851.1| GE21665 [Drosophila yakuba]
Length = 265
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ D G Y+ V+ + EL + + +V + FL+D F N++D+ GV
Sbjct: 60 LSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGV 119
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D R NRF+VVY+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+F
Sbjct: 120 DVPCRKNRFEVVYNLLSLRYNSRVRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVF 179
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D +
Sbjct: 180 FANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSA 239
Query: 184 PWEGVNSLFAKEDSKD 199
PWE + +
Sbjct: 240 PWEQFPNFRNANPPAE 255
>gi|332373832|gb|AEE62057.1| unknown [Dendroctonus ponderosae]
Length = 259
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 86/199 (43%), Positives = 127/199 (63%), Gaps = 1/199 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++D G Y+ + V A + G EL L + +V + FL+D +C F N+ D+ G
Sbjct: 54 QLKDFGKYVADCLPKYVETAQITHGDELELLISPDGVVPVLQFLKDHHNCQFTNLSDIAG 113
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+D SR+ RF+++Y+ LS ++N R+RVK E V S ++ A+W+ERE+WDMYG+
Sbjct: 114 MDVPSRTYRFELIYNLLSLRFNSRIRVKTYTDELTPVDSCDEVFKAANWYEREIWDMYGV 173
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+ K+VV P+EL QE R ++
Sbjct: 174 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFELS 233
Query: 183 SPWEGVNSLFAKEDSKDDM 201
+PWE +++
Sbjct: 234 APWEQFPKFRKALPVAEEI 252
>gi|330938088|ref|XP_003305677.1| hypothetical protein PTT_18588 [Pyrenophora teres f. teres 0-1]
gi|311317183|gb|EFQ86217.1| hypothetical protein PTT_18588 [Pyrenophora teres f. teres 0-1]
Length = 288
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ G Y+++ ++ EL++ V ++ +FL+ + I D+
Sbjct: 75 EALHKYGQYLMSCLPKYIQQFSVWKDELTIYVPPSGIIPTFTFLKYHTAAEYTQISDITA 134
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ ++ RF+VVY+ LS ++N RLRVK E VPS+ +Y GA+W+EREV+D++G+
Sbjct: 135 VDYPTKDQRFEVVYNMLSIRHNSRLRVKTYADEATPVPSLCDLYDGANWYEREVYDLFGV 194
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY-DF 181
FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q R++
Sbjct: 195 FFVGHPDLRRIMTDYGFDGHPLRKDFPMTGYTEIRYDEEKKRIVVEPLEMTQAFRNFRGG 254
Query: 182 LSPWEGVNSLFAKEDSKDDM 201
S WE V +D K +
Sbjct: 255 SSAWEQVG---PGDDLKPEA 271
>gi|238880572|gb|EEQ44210.1| NADH-ubiquinone oxidoreductase subunit 9 [Candida albicans WO-1]
Length = 279
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 123/190 (64%), Gaps = 1/190 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G YI+ V+ EL++ V ++ FL+++ C F + D+
Sbjct: 64 IEELHKFGTYIMACLPKYVQQFSVWKDELTIYVAPSAILPTMLFLKNNTACQFKQVSDVT 123
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK E VPSI ++ GA+WFERE +D++G
Sbjct: 124 AADYPSRTNRFDVVYNLLSVRHNSRIRVKTYANETTPVPSITPLFNGANWFERETYDLFG 183
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FFEGHPDLRRILTDYGFEGHPLRKDFP TG+ E+ YD++ K+++Y P+EL Q R++
Sbjct: 184 VFFEGHPDLRRILTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRIIYEPLELTQAWRNFTV 243
Query: 182 LSP-WEGVNS 190
S WE V
Sbjct: 244 GSSVWEPVGE 253
>gi|241952715|ref|XP_002419079.1| NADH-ubiquinone oxidoreductase subunit, mitochondrial precursor,
putative [Candida dubliniensis CD36]
gi|223642419|emb|CAX42664.1| NADH-ubiquinone oxidoreductase subunit, mitochondrial precursor,
putative [Candida dubliniensis CD36]
Length = 280
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G YI+ ++ EL++ V ++ FL+++ C F + D+
Sbjct: 65 IEELHKFGTYIMACLPKYIQQFSVWKDELTIYVAPTAILPTMLFLKNNTSCQFKQVSDIT 124
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK E VPSI + GA+WFERE +D++G
Sbjct: 125 AADYPSRTNRFDVVYNLLSVRHNSRIRVKTYANETTPVPSITPYFNGANWFERETYDLFG 184
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFFEGHPDLRRILTDYGFEGHPLRKDFP TG+ E+ YD++ K+++Y P+EL Q R++
Sbjct: 185 IFFEGHPDLRRILTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRIIYEPLELTQAWRNFTV 244
Query: 182 LSP-WEGVNS 190
S WE V
Sbjct: 245 GSSVWEPVGE 254
>gi|11466534|ref|NP_044783.1| NADH dehydrogenase subunit 9 [Reclinomonas americana]
gi|6647648|sp|O21271|NDUS3_RECAM RecName: Full=NADH-ubiquinone oxidoreductase subunit 9
gi|2258364|gb|AAD11898.1| NADH dehydrogenase subunit 9 [Reclinomonas americana]
Length = 204
Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 90/195 (46%), Positives = 130/195 (66%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ G ++ F + A+ S GEL+L V +L++L L++ +C F ++ DLC VD
Sbjct: 10 LKEFGISLIKMFPKYIDKAIYSKGELTLHVKPTNLIALMKILKNHTNCQFKSLSDLCAVD 69
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
F + RF++VY+ LS +YN R+RVK V E VPS+ ++ A WFEREVWD++G++F
Sbjct: 70 FPEKKERFEIVYNLLSVRYNSRIRVKTFVDELTPVPSVTCLFQAAGWFEREVWDLFGVYF 129
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
HPDLRRILTDYGFEGHP+RKDFP+TG+VE+ YDD+ K+VV +E+ QE R ++F SP
Sbjct: 130 TNHPDLRRILTDYGFEGHPMRKDFPLTGYVEVRYDDEQKRVVTESLEMTQEFRSFNFTSP 189
Query: 185 WEGVNSLFAKEDSKD 199
WE + K
Sbjct: 190 WEQIEISKPNIKEKK 204
>gi|149184637|ref|ZP_01862955.1| NADH (or F420H2) dehydrogenase, subunit C [Erythrobacter sp. SD-21]
gi|148831957|gb|EDL50390.1| NADH (or F420H2) dehydrogenase, subunit C [Erythrobacter sp. SD-21]
Length = 306
Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 122/196 (62%), Gaps = 2/196 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+I+ L + ++ + GEL L V + LRDD + ++++ G
Sbjct: 11 TQIDGLAGTLSSALGDHLVSVHEEHGELLLAVHRASIEDALRILRDDH--GYQQLMEIAG 68
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ SR+ RF+VVY LS N R+ VK +E VP++ ++P A W EREV+DMYG+
Sbjct: 69 VDYPSRAERFEVVYMLLSLTKNSRIMVKCTASEDTPVPTVTTLWPNAGWLEREVFDMYGV 128
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F+G+ DLRRILTDYGFEGHP RKDFP+TG+VEL Y + K+VVY PVEL Q+ R +DF+
Sbjct: 129 LFDGNTDLRRILTDYGFEGHPFRKDFPLTGYVELRYSEDEKRVVYEPVELAQDLRQFDFM 188
Query: 183 SPWEGVNSLFAKEDSK 198
SPWEG + + ++
Sbjct: 189 SPWEGADYVLPGDEKA 204
>gi|224051042|ref|XP_002199900.1| PREDICTED: NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa
(NADH-coenzyme Q reductase), partial [Taeniopygia
guttata]
Length = 224
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 87/195 (44%), Positives = 124/195 (63%), Gaps = 1/195 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ ++ + EL L + ++ + +FLRD + F ++ DL
Sbjct: 16 KQLCAFGEYVAEILPKYIQQVQVTCFNELELLIHPDGIIPVLTFLRDHTNAQFKSLADLT 75
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR RF++VY+ LS ++N R+RVK E + S V ++ A+W+EREVWDMYG
Sbjct: 76 AVDVPSRQYRFEIVYNLLSLRFNSRIRVKTYTDELTPIDSAVPVHKAANWYEREVWDMYG 135
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+VK+VV PVEL QE R +D
Sbjct: 136 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEVKRVVAEPVELAQEFRKFDL 195
Query: 182 LSPWEGVNSLFAKED 196
SPWE + +
Sbjct: 196 NSPWEAFPAYRPPPE 210
>gi|294083713|ref|YP_003550470.1| NADH (or F420H2) dehydrogenase subunit C [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663285|gb|ADE38386.1| NADH (or F420H2) dehydrogenase, subunit C [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 219
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 129/196 (65%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + +Y+ + V + E+ + V+ D+ S+ + LRDD H F + DL VD
Sbjct: 20 LSTMANYVREILADIYESVVATNDEVLVRVNSQDITSVLTKLRDDNHAAFTQLSDLTAVD 79
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ R RF++VY LS N RLR+ VAEG+SVPS+ G++ A+W ERE WDM+GIFF
Sbjct: 80 YPERPVRFEMVYQLLSISNNMRLRILAGVAEGQSVPSVSGVFSAANWAEREAWDMFGIFF 139
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
GHPDLRR+LTDYGFEGHPLRKDFP+TG VE+ YDD ++VV PV L+QE RD+DFLSP
Sbjct: 140 AGHPDLRRLLTDYGFEGHPLRKDFPLTGHVEVRYDDTQRRVVNEPVHLVQEFRDFDFLSP 199
Query: 185 WEGVNSLFAKEDSKDD 200
WEG+ DS +
Sbjct: 200 WEGMQHAIDAADSDKN 215
>gi|119193969|ref|XP_001247588.1| hypothetical protein CIMG_01359 [Coccidioides immitis RS]
gi|303311651|ref|XP_003065837.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|111606571|gb|ABH10650.1| NADH-ubiquinone oxidoreductase subunit [Coccidioides posadasii]
gi|240105499|gb|EER23692.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320039733|gb|EFW21667.1| NADH-ubiquinone oxidoreductase 30 kDa subunit [Coccidioides
posadasii str. Silveira]
Length = 287
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 79/189 (41%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+++ ++ EL++ + ++ + SFL+D + + D+
Sbjct: 74 SKELHTYGEYLMSCLPKYIQQFSVWKDELTIYIPPTGVIPVISFLKDHTAAEYKQVSDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF+VVY+ LS ++N R+RVK E VPSI +Y GA W+EREV+D++G
Sbjct: 134 AVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITSLYDGAVWYEREVYDLFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 194 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 253
Query: 181 FLSPWEGVN 189
S WE +
Sbjct: 254 GTSAWEQIG 262
>gi|150866762|ref|XP_001386464.2| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Scheffersomyces stipitis CBS 6054]
gi|149388018|gb|ABN68435.2| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Scheffersomyces stipitis CBS 6054]
Length = 281
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 87/190 (45%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G YI+ ++ EL++ V L FL++ F + +D+
Sbjct: 67 IEELHKFGAYIMACMPKYIQQFSVWKDELTIYVAPSALRPTMVFLKNHTSAQFKSCVDVT 126
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK E +VPS+V IY G +WFERE +D++G
Sbjct: 127 AADYPSRTNRFDVVYNLLSVRHNSRIRVKTYANETSAVPSLVPIYQGVNWFERETYDLFG 186
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFFEGHPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD++ K+V+Y P+EL Q R++
Sbjct: 187 IFFEGHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRVIYEPLELTQAWRNFSV 246
Query: 182 LSP-WEGVNS 190
S WE V
Sbjct: 247 GSSVWEQVGE 256
>gi|317032320|ref|XP_003188817.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus niger CBS
513.88]
gi|317032322|ref|XP_001394604.2| NADH-ubiquinone oxidoreductase subunit [Aspergillus niger CBS
513.88]
Length = 287
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI++ V+ EL + V L+ +FL+ + I D+
Sbjct: 74 ADSLHKYGQYIMSCLPKHVQQFSVWKDELCIYVPPSGLIPTMTFLKYHTAAEYTQISDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVDF +R RF+VVY+ LS +YN R+RVK E VPS+ G++ GA W+EREV+DM+G
Sbjct: 134 GVDFPTRDQRFEVVYNMLSVRYNSRIRVKTYADEASPVPSVTGLFEGALWYEREVYDMFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL Y ++ K++V P+EL Q R+++
Sbjct: 194 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYCEEKKRIVIEPLELTQAFRNFEG 253
Query: 182 LS-PWEGVN 189
+ WE V+
Sbjct: 254 GTAAWEPVS 262
>gi|82934613|ref|XP_894449.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Mus musculus]
Length = 263
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ +Y+ V+ S + +L + + ++ +FLRD + F ++ DL
Sbjct: 55 KQLSAFAEYVAEILPKYVQQVQVSCLDKLEICIHHDGVIPTLTFLRDHTNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+EREVWDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+ G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 175 VFFFNHPDLRRILTDYGFEGHPFRKDFPLAGYVELRYDDEVKRVVAEPVELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 235 NSPWEAFPAYRQPPES 250
>gi|281340496|gb|EFB16080.1| hypothetical protein PANDA_010603 [Ailuropoda melanoleuca]
Length = 219
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 89/196 (45%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + FLRD + F ++ DL
Sbjct: 11 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLIFLRDHTNAQFKSLADLT 70
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 71 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESTVSVYKAANWYEREIWDMFG 130
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 131 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 190
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 191 NSPWEAFPAYRQPPES 206
>gi|289739713|gb|ADD18604.1| NADH-ubiquinone oxidoreductase NDUFS3/30kDa subunit [Glossina
morsitans morsitans]
Length = 260
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ D G Y+ V+ + EL + + +V + FL+D F N+ D+
Sbjct: 55 NSLSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFSNLTDIA 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D +R RF+V+Y+ LS +YN R+RVK E + S +Y A+W+ERE++DMYG
Sbjct: 115 GMDVPNRKYRFEVIYNILSLRYNSRIRVKTYTDELTPLDSCFEVYKAANWYEREIYDMYG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 175 VFFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDL 234
Query: 182 LSPWEGVNSLFAKEDSKDDM 201
+PWE + S ++
Sbjct: 235 SAPWEQFPNFRNANPSATEI 254
>gi|58388728|ref|XP_316497.2| AGAP006456-PA [Anopheles gambiae str. PEST]
gi|55239226|gb|EAA11886.2| AGAP006456-PA [Anopheles gambiae str. PEST]
Length = 262
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 126/200 (63%), Gaps = 1/200 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ + G Y+ V+ S EL + + +V + FL+D + F N++D+ G
Sbjct: 57 ELSEFGKYVAECMPKYVQKVQLTSGDELEVLIAPEGVVPVLQFLKDHHNAQFANLVDIAG 116
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+D SR RF+++Y+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+
Sbjct: 117 MDVPSRPYRFEIIYNILSLRYNSRIRVKTYTDELTPIDSCNEVFKAANWYEREIWDMYGV 176
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 177 FFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLS 236
Query: 183 SPWEGVNSLFAKEDSKDDMS 202
+PWE + + ++++
Sbjct: 237 APWEQFPNFRNANPATEEVA 256
>gi|328772973|gb|EGF83010.1| hypothetical protein BATDEDRAFT_8530 [Batrachochytrium
dendrobatidis JAM81]
Length = 181
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 89/181 (49%), Positives = 126/181 (69%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ G YI + ++ EL+L + L+ + +FLRD F + ++ VD
Sbjct: 1 LQEFGKYIASCMPKYIQQITVYKDELTLFIAPSGLIPVATFLRDHQATQFQQVQNITVVD 60
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ SR NRF+VVY+FLS ++N R+RVK E VPS+V +Y GA+W+EREVWDM+G+FF
Sbjct: 61 YPSRENRFEVVYNFLSVRFNNRIRVKTYTNEIDPVPSLVPLYTGANWYEREVWDMFGVFF 120
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
GHPDLRRILTDYGFEGHPLRKDFP+TG+VE+ YD++ K+V+ P+EL Q R +++ SP
Sbjct: 121 TGHPDLRRILTDYGFEGHPLRKDFPLTGYVEMRYDEEKKRVIAEPLELAQSFRMFEYQSP 180
Query: 185 W 185
W
Sbjct: 181 W 181
>gi|307293268|ref|ZP_07573114.1| NADH (or F420H2) dehydrogenase, subunit C [Sphingobium
chlorophenolicum L-1]
gi|306881334|gb|EFN12550.1| NADH (or F420H2) dehydrogenase, subunit C [Sphingobium
chlorophenolicum L-1]
Length = 258
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 85/196 (43%), Positives = 122/196 (62%), Gaps = 2/196 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I+ + I + V+ ELS V L + LRD + ++++
Sbjct: 8 IATIDGIAQEIAGLLGSMLVETVDHADELSFTVVREKLADALAALRD--KAQYQQLMEIA 65
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ R RF+V YH LS N R+RVK++ E + VP++ ++P A W EREV+DMYG
Sbjct: 66 GVDYPERPERFEVCYHLLSVTRNHRIRVKVSTDEDRPVPTVTHLWPVAGWLEREVFDMYG 125
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ FEG+ DLRRILTDYGF+GHP RKDFP+TG+VEL Y ++ K+VVY PV+L Q+ R +DF
Sbjct: 126 VIFEGNADLRRILTDYGFKGHPQRKDFPLTGYVELRYSEEDKRVVYEPVKLAQDFRSFDF 185
Query: 182 LSPWEGVNSLFAKEDS 197
+SPWEG + ++
Sbjct: 186 MSPWEGAQYVLPGDEK 201
>gi|48099278|ref|XP_394885.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Apis mellifera]
Length = 261
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 128/204 (62%), Gaps = 4/204 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
I+DLG YI V+ + EL + V ++ FL+ + + ++ D+
Sbjct: 54 ETIKDLGLYIAACLPKYVQKTQIVAGDELEILVCPEGIIPTLKFLKLHQNTQYTSLSDIT 113
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
+D SR RF+++Y+ LS +N+R+RVK E VPS I+ A+W+ERE+WDM+G
Sbjct: 114 AMDVPSRQYRFEIIYNLLSITFNKRIRVKTYTDELTPVPSAEPIFDAANWYEREIWDMFG 173
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F GH DLRRILTDYGFEGHPLRKDFP++GFVE+ YDD++K+VV P+EL QE R ++
Sbjct: 174 ILFMGHTDLRRILTDYGFEGHPLRKDFPLSGFVEVRYDDELKRVVCEPLELAQEFRKFEL 233
Query: 182 LSPWEGVNS---LFAKEDSKDDMS 202
+PWE + + ++SK+D +
Sbjct: 234 SAPWEQFPNFRSIPPSDESKEDST 257
>gi|169606670|ref|XP_001796755.1| hypothetical protein SNOG_06383 [Phaeosphaeria nodorum SN15]
gi|160707055|gb|EAT86214.2| hypothetical protein SNOG_06383 [Phaeosphaeria nodorum SN15]
Length = 282
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 123/199 (61%), Gaps = 4/199 (2%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ G Y+++ ++ EL++ + ++ +FL+ + I D+
Sbjct: 75 EALHKYGQYLMSCLPKYIQQFSVWKDELTIYIPPAGVIPTFTFLKYHTAAEYTQISDITA 134
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ ++ RF+VVY+ LS ++N RLRVK E VPS+ +Y GA+W+EREV+D++G+
Sbjct: 135 VDYPTKDQRFEVVYNMLSIRHNSRLRVKTYADEATPVPSLCDLYDGANWYEREVYDLFGV 194
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY-DF 181
FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q R++
Sbjct: 195 FFVGHPDLRRIMTDYGFDGHPLRKDFPMTGYTEIRYDEEKKRIVVEPLEMTQAFRNFRGG 254
Query: 182 LSPWEGVNSLFAKEDSKDD 200
S WE V +D K +
Sbjct: 255 SSAWEQVG---PGDDLKPE 270
>gi|68468443|ref|XP_721781.1| potential mitochondrial Complex I, NUGM_30kd subunit [Candida
albicans SC5314]
gi|68468682|ref|XP_721660.1| potential mitochondrial Complex I, NUGM_30kd subunit [Candida
albicans SC5314]
gi|46443589|gb|EAL02870.1| potential mitochondrial Complex I, NUGM_30kd subunit [Candida
albicans SC5314]
gi|46443719|gb|EAL02999.1| potential mitochondrial Complex I, NUGM_30kd subunit [Candida
albicans SC5314]
Length = 279
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ G YI+ V EL++ V ++ FL+++ C F + D+
Sbjct: 64 IEELHKFGTYIMACLPKYVHQFSVWKDELTIYVAPSAILPTMLFLKNNTACQFKQVSDVT 123
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK E VPSI ++ GA+WFERE +D++G
Sbjct: 124 AADYPSRTNRFDVVYNLLSVRHNSRIRVKTYANETTPVPSITPLFNGANWFERETYDLFG 183
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FFEGHPDLRRILTDYGFEGHPLRKDFP TG+ E+ YD++ K+++Y P+EL Q R++
Sbjct: 184 VFFEGHPDLRRILTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRIIYEPLELTQAWRNFTV 243
Query: 182 LSP-WEGVNS 190
S WE V
Sbjct: 244 GSSVWEPVGE 253
>gi|189190938|ref|XP_001931808.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973414|gb|EDU40913.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 288
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ G Y+++ V+ EL++ V ++ +FL+ + I D+
Sbjct: 75 EALHKYGQYLMSCLPKYVQQFSVWKDELTIYVPPSGIIPTFTFLKYHTAAEYTQISDITA 134
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ ++ RF+VVY+ LS ++N RLRVK E VPS+ +Y GA+W+EREV+D++G+
Sbjct: 135 VDYPTKDQRFEVVYNMLSIRHNSRLRVKTYADEATPVPSLCDLYDGANWYEREVYDLFGV 194
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY-DF 181
FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q R++
Sbjct: 195 FFVGHPDLRRIMTDYGFDGHPLRKDFPMTGYTEIRYDEEKKRIVVEPLEMTQAFRNFRGG 254
Query: 182 LSPWEGVNSLFAKEDSKDDM 201
S WE V +D K +
Sbjct: 255 SSAWEQVG---PGDDLKPEA 271
>gi|91079210|ref|XP_966588.1| PREDICTED: similar to AGAP006456-PA [Tribolium castaneum]
gi|270004834|gb|EFA01282.1| hypothetical protein TcasGA2_TC002817 [Tribolium castaneum]
Length = 257
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 85/199 (42%), Positives = 125/199 (62%), Gaps = 1/199 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++D G Y ++ + EL L + ++ + FL+D + F NI D+ G
Sbjct: 53 QLKDFGKYCAECLPKYIQKVQITAGDELELLIVPEGVLPVLQFLKDHHNAQFANITDIAG 112
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+D SR RF+V+Y+ LS ++N R+RVK E + S IY GA+W+ERE+WDMYG+
Sbjct: 113 MDVPSREYRFEVIYNLLSLRFNSRIRVKTYTDELTPLDSACDIYKGANWYEREIWDMYGV 172
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+ K+VV P+EL QE R ++
Sbjct: 173 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFELS 232
Query: 183 SPWEGVNSLFAKEDSKDDM 201
+PWE + + +++
Sbjct: 233 APWEQFPNFRNAPPTAEEV 251
>gi|171682350|ref|XP_001906118.1| hypothetical protein [Podospora anserina S mat+]
gi|170941134|emb|CAP66784.1| unnamed protein product [Podospora anserina S mat+]
Length = 286
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL++ + ++ + SFL+ + F + D+
Sbjct: 73 ADAMHKYGAWLMGCLPKYIQQFSVWKDELTIYICPSGVIPVFSFLKYNTSAEFTMVSDIT 132
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF++VY+ LS ++N R+RVK E VPS+ +Y GA+W+EREV+DM+G
Sbjct: 133 AVDFPTRDQRFEIVYNLLSIRHNSRIRVKTYADEASPVPSLTPLYDGANWYEREVYDMFG 192
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF HPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 193 VFFVNHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRYDEEKKRIVTEPLELTQAFRNFEG 252
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 253 GSSAWEQVG 261
>gi|259487070|tpe|CBF85447.1| TPA: NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
[Precursor] (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 290
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI+ V+ EL + V ++ +FL+ F + D+
Sbjct: 76 ADSLHQYGQYIMACLPKHVQQFSVWKDELCIYVPPSGIIPTFTFLKYHTSAEFTTVSDIT 135
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ ++ RF+VVY+ LS +YN R+RVK E VPSI G+Y GA W+EREV+D++G
Sbjct: 136 AVDYPTKDQRFEVVYNLLSVRYNSRIRVKTYADEASPVPSITGLYEGALWYEREVYDLFG 195
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 196 VFFTGHPDLRRIMTDYGFDGHPLRKDFPMTGYTELRYDEEKKRIVIEPLELTQAFRNFEG 255
Query: 181 FLSPWEGVN 189
+ WE V
Sbjct: 256 GTTAWEPVG 264
>gi|238501634|ref|XP_002382051.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Aspergillus flavus NRRL3357]
gi|220692288|gb|EED48635.1| NADH-ubiquinone oxidoreductase 304 kDa subunit precursor
[Aspergillus flavus NRRL3357]
Length = 352
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ V+ EL + V +V L SFL+ F I D+
Sbjct: 71 ADALHQYGQYVMSCLPKYVQQFTVWKDELVIYVPPSGVVPLMSFLKYHTAAEFTQISDIT 130
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF ++ RF+VVY+ LS ++N R+RVK E VPS+ G++ GA W+EREV+DM+G
Sbjct: 131 AVDFPTKDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSVTGLFEGALWYEREVYDMFG 190
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 191 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFEG 250
Query: 182 LS-PWEGVN 189
+ WE V
Sbjct: 251 GTAAWEPVG 259
>gi|134079294|emb|CAK96923.1| unnamed protein product [Aspergillus niger]
Length = 280
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G YI++ V+ EL + V L+ +FL+ + I D+
Sbjct: 67 ADSLHKYGQYIMSCLPKHVQQFSVWKDELCIYVPPSGLIPTMTFLKYHTAAEYTQISDIT 126
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVDF +R RF+VVY+ LS +YN R+RVK E VPS+ G++ GA W+EREV+DM+G
Sbjct: 127 GVDFPTRDQRFEVVYNMLSVRYNSRIRVKTYADEASPVPSVTGLFEGALWYEREVYDMFG 186
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL Y ++ K++V P+EL Q R+++
Sbjct: 187 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYCEEKKRIVIEPLELTQAFRNFEG 246
Query: 182 LS-PWEGVN 189
+ WE V+
Sbjct: 247 GTAAWEPVS 255
>gi|164422317|gb|ABY55256.1| NADH dehydrogenase ubiquinone Fe-S protein 3 [Oncorhynchus masou
formosanus]
Length = 255
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 90/185 (48%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + EL + + ++ + +FLRD + F N+IDL
Sbjct: 49 NQLAAFGEYVAEMLPKYVQQVQVTCYNELEVMIHPDGVIPVLTFLRDHSNAQFRNMIDLT 108
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS +YN ++R+K E V S V ++ A+W+EREVWDMYG
Sbjct: 109 AVDIPTRQNRFEIVYNLLSLRYNSQIRLKTYTDELTPVDSSVSVHNAANWYEREVWDMYG 168
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++GFVE+ YDD+VK+VV PVEL QE R +D
Sbjct: 169 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGFVEVRYDDEVKRVVAEPVELSQEFRKFDL 228
Query: 182 LSPWE 186
SPWE
Sbjct: 229 NSPWE 233
>gi|162148809|ref|YP_001603270.1| NADH-quinone oxidoreductase subunit C [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545443|ref|YP_002277672.1| NADH (or F420H2) dehydrogenase subunit C [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787386|emb|CAP56981.1| NADH-quinone oxidoreductase chain C [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533120|gb|ACI53057.1| NADH (or F420H2) dehydrogenase, subunit C [Gluconacetobacter
diazotrophicus PAl 5]
Length = 213
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
++ A GEL + +L++L LRDDP ++DLCGVD+ +R+ RFDVVY+ L
Sbjct: 25 IQSAAIEGGELVVRTGRDNLIALMGMLRDDPRYACEQLMDLCGVDYPARTERFDVVYNLL 84
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S N R+RV + E VPS+ ++P A W+ERE +D++G+ F G PDLRRILTDYGF
Sbjct: 85 SVTLNHRIRVIVTTDETNPVPSVHHLWPAATWWERECYDLFGVLFSGQPDLRRILTDYGF 144
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKD 199
EGHPLRKDFP+TG+VE+ YD+ ++VVY PV+L Q+ R++DF SPWEG+ ++
Sbjct: 145 EGHPLRKDFPLTGYVEVRYDEDRREVVYEPVKLTQDFRNFDFESPWEGI-LTLPGDEKAH 203
Query: 200 DM 201
+
Sbjct: 204 ET 205
>gi|320580130|gb|EFW94353.1| hypothetical protein HPODL_3853 [Pichia angusta DL-1]
Length = 2655
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 81/188 (43%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ + G YI+ ++ EL + LV + +FL++ F +++
Sbjct: 2445 EQLHEFGRYIMACMPKFIQQYSVWKDELIVYCAPSGLVPVATFLKNHTSSQFTACMNITA 2504
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
D+ SR NRFDVVY LS ++N R+R+K +E +PS+V +Y GA+W ERE +D++G+
Sbjct: 2505 ADYPSRKNRFDVVYDLLSVRFNSRIRIKTFASEMTPIPSLVPLYEGANWLERETYDLFGV 2564
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FFE HPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD + ++VVY P+EL Q R++
Sbjct: 2565 FFENHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDSEKRRVVYEPLELTQAWRNFTVG 2624
Query: 183 SP-WEGVN 189
S WE V
Sbjct: 2625 SSVWEQVG 2632
>gi|39951381|ref|XP_363407.1| hypothetical protein MGG_01333 [Magnaporthe oryzae 70-15]
gi|145020847|gb|EDK04976.1| hypothetical protein MGG_01333 [Magnaporthe oryzae 70-15]
Length = 291
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G ++++ V+ EL++ + ++ + +FL+ + F + D+
Sbjct: 77 AENLHRYGQWLMSCLPKYVQQFSLWKDELTIYICPSGVIPVFNFLKYNTSAEFTTVSDIT 136
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF++VY+ LS ++N R+RVK E VPSI IY GA+W+EREV+DM+G
Sbjct: 137 AVDFPTRDQRFEIVYNLLSVRHNARIRVKTYADEASPVPSICSIYDGANWYEREVYDMFG 196
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ Y ++ K++V P+EL Q R+++
Sbjct: 197 VFFVGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEVRYHEEKKRIVTEPLELTQAFRNFEG 256
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WE V D +
Sbjct: 257 GSSAWEQVG---PGNDRTPE 273
>gi|194749201|ref|XP_001957028.1| GF10219 [Drosophila ananassae]
gi|190624310|gb|EDV39834.1| GF10219 [Drosophila ananassae]
Length = 261
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ D G Y+ V+ S EL + + +V + FL+D F N++D+ GV
Sbjct: 57 LSDFGRYVAECLPKYVQKVQLTSGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGV 116
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D R +RF+VVY+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+F
Sbjct: 117 DVPCRKHRFEVVYNLLSLRYNSRIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVF 176
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D +
Sbjct: 177 FANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSA 236
Query: 184 PWEGVNSLFAKEDSKD 199
PWE + +
Sbjct: 237 PWEQFPNFRNANPPAE 252
>gi|209733838|gb|ACI67788.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Salmo salar]
Length = 255
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 91/185 (49%), Positives = 122/185 (65%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+V V+ + EL + + + + +FLRD + F N+IDL
Sbjct: 49 NQLAAFGEYVVEMLPKYVQQVQVTCYNELEVMIHPDGVAPVLTFLRDHSNAQFRNMIDLT 108
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS +YN R+R+K E V S V ++ A+W+EREVWDMYG
Sbjct: 109 AVDIPTRQNRFEIVYNLLSLRYNSRIRLKTYTDELTPVDSSVSVHNAANWYEREVWDMYG 168
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++GFVE+ YDD+VK+ V PVEL QE R +D
Sbjct: 169 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGFVEVRYDDEVKRAVAEPVELSQEFRKFDL 228
Query: 182 LSPWE 186
SPWE
Sbjct: 229 NSPWE 233
>gi|322698841|gb|EFY90608.1| NADH-ubiquinone oxidoreductase-like protein [Metarhizium acridum
CQMa 102]
Length = 282
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL++ + ++ + +FL+ + F + +
Sbjct: 68 SDNMHRYGSWLMGCLPKYIQQFSVWKDELTIYISPSGVIPVFTFLKYNTSAEFTQMSTIT 127
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
DF +R RF+VVY+ LS ++N R+RVK E VPS+ +Y GA+W+EREV+D++G
Sbjct: 128 ACDFPTRDKRFEVVYNLLSVRHNSRIRVKTYADEASPVPSVTSLYDGANWYEREVYDLFG 187
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 188 VFFAGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRYDEEKKRIVTEPLELTQAFRNFEG 247
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
S WE V ED + D
Sbjct: 248 GSSAWEMVG---PGEDRRPDT 265
>gi|169769188|ref|XP_001819064.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus oryzae RIB40]
gi|83766922|dbj|BAE57062.1| unnamed protein product [Aspergillus oryzae]
Length = 284
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ V+ EL + V +V L SFL+ F I D+
Sbjct: 71 ADALHQYGQYVMSCLPKYVQQFTVWKDELVIYVPPSGVVPLMSFLKYHTAAEFTQISDIT 130
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF ++ RF+VVY+ LS ++N R+RVK E VPS+ G++ GA W+EREV+DM+G
Sbjct: 131 AVDFPTKDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSVTGLFEGALWYEREVYDMFG 190
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+EL Q R+++
Sbjct: 191 VFFTGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFEG 250
Query: 182 LS-PWEGVN 189
+ WE V
Sbjct: 251 GTAAWEPVG 259
>gi|296536154|ref|ZP_06898282.1| NADH-quinone oxidoreductase subunit C [Roseomonas cervicalis ATCC
49957]
gi|296263525|gb|EFH10022.1| NADH-quinone oxidoreductase subunit C [Roseomonas cervicalis ATCC
49957]
Length = 221
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Query: 20 VRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
V + + GE + L V L ++ LRDDP F +D+CGVD+ +R+ RFDVVY+
Sbjct: 35 VTASRIARGEEVELRVRREALHAVLQMLRDDPRLAFEQCMDICGVDWPTRAARFDVVYNL 94
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
LS +N R+RV V ++ ++P A WFERE WDMYGI F+G PDLRRILTDYG
Sbjct: 95 LSLTHNHRIRVITETDAATPVATVCDLWPAATWFEREAWDMYGIVFDGQPDLRRILTDYG 154
Query: 139 FEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDS 197
FEGHPLRKDFP+TGFVE+ YD + ++VVY PV+L Q+ R++DFLSPWEG+ ++
Sbjct: 155 FEGHPLRKDFPLTGFVEVRYDAERQQVVYEPVKLQQDFRNFDFLSPWEGMT-TLPGDEK 212
>gi|322710830|gb|EFZ02404.1| NADH-ubiquinone oxidoreductase-like protein [Metarhizium anisopliae
ARSEF 23]
Length = 281
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL++ + ++ + +FL+ + F + +
Sbjct: 68 SDNMHRYGSWLMGCLPKYIQQFSVWKDELTIYISPSGVIPVFTFLKYNTSAEFTQMSTIT 127
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
DF +R RF+VVY+ LS ++N R+RVK E VPS+ +Y GA+W+EREV+D++G
Sbjct: 128 ACDFPTRDKRFEVVYNLLSVRHNSRIRVKTYADEASPVPSVTSLYDGANWYEREVYDLFG 187
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 188 VFFAGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRYDEEKKRIVTEPLELTQAFRNFEG 247
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
S WE V ED + D
Sbjct: 248 GSSAWEMVG---PGEDRRPDT 265
>gi|50554965|ref|XP_504891.1| YALI0F02123p [Yarrowia lipolytica]
gi|6689654|emb|CAB65522.1| NUGM protein [Yarrowia lipolytica]
gi|49650761|emb|CAG77693.1| YALI0F02123p [Yarrowia lipolytica]
Length = 281
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 89/187 (47%), Positives = 126/187 (67%), Gaps = 1/187 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ YI+ + ++ EL+L V ++ + +FLRD+ + +IID+ V
Sbjct: 70 DLHQYAKYIMAALPKYIQGFSVWKDELTLHVAPSAVIPVTTFLRDNTSTQYKSIIDITAV 129
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D+ SR NRF+VVY+FLS ++N R+R+K E VPSI +Y GA+WFERE +DMYG+F
Sbjct: 130 DYPSRENRFEVVYNFLSVRHNSRIRLKTYATEVTPVPSITCLYEGANWFEREAYDMYGVF 189
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
FEGHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ +D++ ++VVY P+EL Q R++ S
Sbjct: 190 FEGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEVRWDEEKRRVVYEPLELTQAFRNFSAGS 249
Query: 184 -PWEGVN 189
WE V
Sbjct: 250 TAWEPVG 256
>gi|225709662|gb|ACO10677.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Caligus rogercresseyi]
gi|225709712|gb|ACO10702.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Caligus rogercresseyi]
Length = 266
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 1/199 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + + D G Y+ V+ + EL + + +V + SFL+D + F N++D
Sbjct: 55 MRQNLSDFGQYVAECMPKYVQKIQLTAGDELEILIHPDGVVPIISFLKDHHNAEFTNLVD 114
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
LCG+D +R +RF+++Y+ LS ++N R+RVK E + SIV I+ A+W+EREVWDM
Sbjct: 115 LCGMDVPTRKHRFEIIYNLLSLRFNSRIRVKTYTDELTPIDSIVDIHKAANWYEREVWDM 174
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG++F HPDLRRILTDYGFEGHPLRKDFP+TG+ EL YD + +++V PVEL QE+R +
Sbjct: 175 YGVYFANHPDLRRILTDYGFEGHPLRKDFPLTGYYELRYDMEHRRIVQEPVELAQEYRKF 234
Query: 180 DFLSPWEGVNSLFAKEDSK 198
D +PWE +
Sbjct: 235 DLAAPWEQFPQFREPLQAA 253
>gi|50409157|ref|XP_456843.1| DEHA2A11814p [Debaryomyces hansenii CBS767]
gi|49652507|emb|CAG84818.1| DEHA2A11814p [Debaryomyces hansenii]
Length = 284
Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 86/189 (45%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G YI+ ++ EL + V L FL++ F ++D+
Sbjct: 69 SEELHKFGKYIMGCLPKFIQQFSVWKDELVIYVAPSALRPTMMFLKNHTAAQFKAVMDVT 128
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK +E VPSIV ++ G +WFERE +D++G
Sbjct: 129 AADYPSRTNRFDVVYNMLSVRHNSRIRVKTYASEVSPVPSIVPLFQGTNWFERETYDLFG 188
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFFE HPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD++ K+VVY P+EL Q R++
Sbjct: 189 IFFEDHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRVVYEPLELSQAFRNFAV 248
Query: 182 LSP-WEGVN 189
S WE V
Sbjct: 249 GSSVWEPVG 257
>gi|193657123|ref|XP_001952447.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Acyrthosiphon pisum]
Length = 255
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 84/195 (43%), Positives = 126/195 (64%), Gaps = 1/195 (0%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
G+++ ++ S EL L + ++ + FL++ +C F N+ DLC VD
Sbjct: 53 FGNFVAECLPKYIQKIQISSKNELELLIAPEGVLPVFHFLKNQTNCQFANLSDLCAVDVP 112
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
RSNRF++VY+ LS ++N R+RVK E + SI IY A+W+ERE+WDM+G+FF
Sbjct: 113 QRSNRFEIVYNLLSLRFNTRIRVKTYTDELTPIDSITSIYEAANWYEREIWDMFGVFFTN 172
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+ K+VV P+E+ QE R ++ +PWE
Sbjct: 173 HPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLEMSQEFRRFELSTPWE 232
Query: 187 GVNSLFAKEDSKDDM 201
+ + + +++
Sbjct: 233 QFPNFRSASPTTEEV 247
>gi|94496480|ref|ZP_01303057.1| NADH (or F420H2) dehydrogenase, subunit C [Sphingomonas sp. SKA58]
gi|94424226|gb|EAT09250.1| NADH (or F420H2) dehydrogenase, subunit C [Sphingomonas sp. SKA58]
Length = 278
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/197 (44%), Positives = 123/197 (62%), Gaps = 2/197 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I+ + D I + V+ ELS V +L + LRD H + ++++
Sbjct: 8 IATIDGIADEIAALLGSMLVETVDHADELSFTVVRAELANAMVTLRDMGH--YQQLMEIA 65
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ R+ RF+V YH LS N R+RVK++ E VP++ I+P A W EREV+DMYG
Sbjct: 66 GVDYPDRAERFEVCYHLLSVTRNHRIRVKVSTDENMPVPTVTHIWPVAGWLEREVFDMYG 125
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ FEG+ DLRRILTDYGF GHP RKDFP+TG+VEL Y ++ K+VVY PV L Q+ R +DF
Sbjct: 126 VVFEGNTDLRRILTDYGFRGHPQRKDFPLTGYVELRYSEEDKRVVYEPVRLAQDFRSFDF 185
Query: 182 LSPWEGVNSLFAKEDSK 198
+SPWEG + ++
Sbjct: 186 MSPWEGAQYVLPGDEKA 202
>gi|309262569|ref|XP_003085834.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like [Mus musculus]
Length = 233
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ +Y+ V+ S + +L + + ++ +FLRD + F ++ DL
Sbjct: 25 KQLSAFAEYVAEILPKYVQQVQVSCLDKLEICIHHDGVIPTLTFLRDHTNAQFKSLADLT 84
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+EREVWDM+G
Sbjct: 85 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFG 144
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+ G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 145 VFFFNHPDLRRILTDYGFEGHPFRKDFPLAGYVELRYDDEVKRVVAEPVELAQEFRKFDL 204
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 205 NSPWEAFPAYRQPPES 220
>gi|268568132|ref|XP_002640168.1| C. briggsae CBR-NUO-2 protein [Caenorhabditis briggsae]
gi|187029272|emb|CAP31615.1| CBR-NUO-2 protein [Caenorhabditis briggsae AF16]
Length = 399
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + G Y V+ + G EL L + +V + SFL+ + F N+ +
Sbjct: 185 ERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGNHSAQFTNLTFIT 244
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D +R NR +V+Y S ++N R+RV+ E + S+ ++ GADW+EREV+DMYG
Sbjct: 245 GMDVPTRKNRLEVIYALYSVRFNARVRVRTYTDEIAPIDSVTPVFKGADWYEREVYDMYG 304
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHP RKD+P++G+ E+ YD ++K+VVY P E+ QE R +D
Sbjct: 305 VWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPELKRVVYEPSEMAQEFRKFDL 364
Query: 182 LSPWE 186
SPWE
Sbjct: 365 NSPWE 369
>gi|326387460|ref|ZP_08209069.1| NADH dehydrogenase, subunit C [Novosphingobium nitrogenifigens DSM
19370]
gi|326208116|gb|EGD58924.1| NADH dehydrogenase, subunit C [Novosphingobium nitrogenifigens DSM
19370]
Length = 210
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 122/190 (64%), Gaps = 2/190 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D +++ + + GE+ L V ++ ++ LRD F ++D+ GVD+ SR+
Sbjct: 19 DSLLSRLGDVIVASKEEHGEIVLTVKRDEIENVLRTLRDKE--QFQQLMDIAGVDYPSRA 76
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
RF+VVY LS N RL VK++ E VP++ ++P A W+ERE +D+YG+ F G+ D
Sbjct: 77 ERFEVVYCLLSVTRNLRLIVKVSTDEATPVPTVTTLWPNAGWYEREAYDLYGVLFAGNTD 136
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVN 189
LRRILTDYGF+GHP RKDFP+TG+VEL Y ++ ++VVY PV L Q+ R +D+ SPWEG +
Sbjct: 137 LRRILTDYGFQGHPFRKDFPLTGYVELRYSEEDQRVVYEPVRLAQDLRQFDYQSPWEGPH 196
Query: 190 SLFAKEDSKD 199
+ ++ +
Sbjct: 197 YVLPGDEKAE 206
>gi|302407618|ref|XP_003001644.1| NADH dehydrogenase iron-sulfur protein [Verticillium albo-atrum
VaMs.102]
gi|261359365|gb|EEY21793.1| NADH dehydrogenase iron-sulfur protein [Verticillium albo-atrum
VaMs.102]
Length = 284
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ V+ EL++ + ++ + SFL+ + F + +
Sbjct: 73 SDNLHKYGAWVMGCLPKYVQQFSVWKDELTIYIPPSGVIPVISFLKYNTSAEFTQVSTVT 132
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ +R RF+++Y+ LS +YN R+RVK E VPSI G++ GA+W+ERE +D++G
Sbjct: 133 AVDYPTRDQRFEIIYNLLSVRYNSRIRVKTYADEVSPVPSITGLFDGANWYEREAYDLFG 192
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
IFF GHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ +D++ K++V P+EL Q R+++
Sbjct: 193 IFFVGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRFDEEKKRIVTEPLELTQAFRNFEG 252
Query: 181 FLSPWEGVNSLFAKEDSKDD 200
S WE + +D + +
Sbjct: 253 GTSAWEQIG---PGDDRRPE 269
>gi|85086366|ref|XP_957689.1| NADH:ubiquinone oxidoreductase 30.4kD subunit [Neurospora crassa
OR74A]
gi|67477363|sp|P23710|NDUS3_NEUCR RecName: Full=NADH-ubiquinone oxidoreductase 30.4 kDa subunit,
mitochondrial; AltName: Full=CI-31kD; AltName:
Full=Complex I-30kD; Flags: Precursor
gi|28918783|gb|EAA28453.1| NADH:ubiquinone oxidoreductase 30.4kD subunit [Neurospora crassa
OR74A]
Length = 283
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL++ + ++ + SFL+ + + + D+
Sbjct: 70 ADNLHKYGSWLMGCLPKYIQQFSVWKDELTIYISPAGVIPVFSFLKYNTAAEYTQVSDIT 129
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF ++ RF+VVY+ LS ++N R+RVK E VPSI +Y GA+W+EREV+D++G
Sbjct: 130 AVDFPTKDQRFEVVYNLLSVRHNSRIRVKTYADEVSPVPSITPLYDGANWYEREVYDLFG 189
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q R+++
Sbjct: 190 VFFTGHPDLRRIMTDYGFDGHPLRKDFPMTGYTEIRYDEEKKRIVTEPLEMTQAFRNFEG 249
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 250 GSSAWEQVG 258
>gi|332020270|gb|EGI60704.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Acromyrmex echinatior]
Length = 263
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + G YI + ++ + G EL L + ++ +FL+D + FVN+ D+
Sbjct: 60 DRLINFGRYINDCLPKYIQQVQLAAGDELELLITPDGIIPTFTFLKDHHNTQFVNLSDIT 119
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
+D SR RF++VY+ LS +YN R+RVK E V S+ ++ A+W+ERE+WDM+G
Sbjct: 120 ALDVPSRQCRFELVYNLLSLRYNSRIRVKTYTNELTPVDSLYSVFQAANWYEREIWDMFG 179
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGF+GHPLRKDFP++G+VE+ YDD+ K++V P+EL QE R ++
Sbjct: 180 VFFSNHPDLRRILTDYGFQGHPLRKDFPLSGYVEVRYDDEHKRIVIEPLELTQEFRKFEL 239
Query: 182 LSPWEGVNSLFAKEDSKDDMS 202
+PWE + + +S
Sbjct: 240 AAPWEQFPNFRDAPAIAEPIS 260
>gi|103486795|ref|YP_616356.1| NADH (or F420H2) dehydrogenase, subunit C [Sphingopyxis alaskensis
RB2256]
gi|98976872|gb|ABF53023.1| NADH (or F420H2) dehydrogenase, subunit C [Sphingopyxis alaskensis
RB2256]
Length = 274
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRL 87
GE S+ V + + LRD+ + ++++ GVD+ R RF+VVYH LS N RL
Sbjct: 9 GEDSITVRREAIAGVMISLRDN--LDYQQLMEIAGVDYPDRPERFEVVYHLLSVTKNHRL 66
Query: 88 RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
RV+++ E VPSIV ++P A W EREV+DMYG+ F G+PDLRRILTDYGF+GHP RKD
Sbjct: 67 RVRVSTDEATPVPSIVPVWPVAGWLEREVFDMYGVLFAGNPDLRRILTDYGFQGHPQRKD 126
Query: 148 FPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSK 198
FP+TG++EL Y ++ K+VVY PV+L Q+ R++DFLSPWEG + + ++
Sbjct: 127 FPLTGYIELRYSEEDKRVVYEPVKLAQDFRNFDFLSPWEGADYVLPGDEKA 177
>gi|154274616|ref|XP_001538159.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
gi|150414599|gb|EDN09961.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
Length = 280
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ ++ EL++ + ++ +FL+ + ++D+
Sbjct: 74 SASLHKYGQYLMSCLPKYIQQFSVWKDELTIYIPPSGVIPTFTFLKQHTAAEYTQVVDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF R RF+VVY+ LS ++N R+RVK E VPSI +Y GA W+EREV+D++G
Sbjct: 134 AVDFPGRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITCLYDGALWYEREVYDLFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF HPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q RD+
Sbjct: 194 VFFVDHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLEMTQAFRDFQG 253
Query: 181 FLSPWEGVNSLFAKEDSK 198
S WE + K S+
Sbjct: 254 GSSAWEQIGDGIDKTPSE 271
>gi|324514811|gb|ADY45996.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 [Ascaris
suum]
Length = 260
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + G Y V+ + G EL L + +V + +FL+ + F N+ +C
Sbjct: 44 ERLANFGRYAAECLPKFVQRVQFAGGDELELLIHPSGVVPVMAFLKGNHSAQFTNLTFIC 103
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD +R RF+VVY LS ++N R+RV+ E + SI ++ GA+W+EREV+D+YG
Sbjct: 104 GVDVPTRKYRFEVVYALLSTRFNARIRVRTYTDEIAPIESITSVFKGANWYEREVYDLYG 163
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHPLRKDFP++G+ E+ YD ++K++VY P EL QE R +D
Sbjct: 164 VWFNNHPDLRRILTDYGFEGHPLRKDFPLSGYNEVRYDPELKRIVYEPTELAQEFRKFDL 223
Query: 182 LSPWE 186
+PWE
Sbjct: 224 ETPWE 228
>gi|225715412|gb|ACO13552.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Esox lucius]
Length = 255
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ + EL + + +V + +FLRD + F N+IDL
Sbjct: 49 KQLAVFGEYVAEMLPKYVQQVQVTCYNELEVMIHPDGVVPVLTFLRDHTNAQFRNMIDLT 108
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD SR NRF++VY+ LS +YN R+R+K E V S V ++ A+W+EREVWDMYG
Sbjct: 109 AVDIPSRQNRFEIVYNLLSLRYNSRIRLKTYTDELTPVDSAVSVHNAANWYEREVWDMYG 168
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++GFVE+ YDD+VK+VV PVEL +E R +D
Sbjct: 169 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGFVEVRYDDEVKRVVAEPVELAREFRKFDL 228
Query: 182 LSPWE 186
SPWE
Sbjct: 229 NSPWE 233
>gi|71990788|ref|NP_491881.2| NADH Ubiquinone Oxidoreductase family member (nuo-2)
[Caenorhabditis elegans]
gi|51988139|gb|AAB52474.2| Nadh ubiquinone oxidoreductase protein 2, isoform a, confirmed by
transcript evidence [Caenorhabditis elegans]
Length = 445
Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + G Y V+ + G EL L + +V + SFL+ + F N+ +
Sbjct: 230 ERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGNHSAQFTNLTFIT 289
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D +R NR +V+Y S ++N R+RV+ E + S ++ GADWFEREV+DMYG
Sbjct: 290 GMDVPTRKNRLEVIYSLYSVRFNARVRVRTYTDEIAPIDSATPVFKGADWFEREVYDMYG 349
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHP RKD+P++G+ E+ YD ++K+VVY P EL QE R +D
Sbjct: 350 VWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPELKRVVYEPSELAQEFRKFDL 409
Query: 182 LSPWE 186
+PWE
Sbjct: 410 NTPWE 414
>gi|32563621|ref|NP_871796.1| NADH Ubiquinone Oxidoreductase family member (nuo-2)
[Caenorhabditis elegans]
gi|27670051|gb|AAO21397.1| Nadh ubiquinone oxidoreductase protein 2, isoform b, confirmed by
transcript evidence [Caenorhabditis elegans]
Length = 268
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + G Y V+ + G EL L + +V + SFL+ + F N+ +
Sbjct: 53 ERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGNHSAQFTNLTFIT 112
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D +R NR +V+Y S ++N R+RV+ E + S ++ GADWFEREV+DMYG
Sbjct: 113 GMDVPTRKNRLEVIYSLYSVRFNARVRVRTYTDEIAPIDSATPVFKGADWFEREVYDMYG 172
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHP RKD+P++G+ E+ YD ++K+VVY P EL QE R +D
Sbjct: 173 VWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPELKRVVYEPSELAQEFRKFDL 232
Query: 182 LSPWE 186
+PWE
Sbjct: 233 NTPWE 237
>gi|322796534|gb|EFZ19008.1| hypothetical protein SINV_03420 [Solenopsis invicta]
Length = 270
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + + G YI + ++ + G EL L + ++ + +FL+D + FVN+ D+
Sbjct: 67 IDHLINFGRYINDCLPKYIQQVQMAAGDELELLIAPDGIIPILTFLKDHHNTQFVNLADI 126
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+D SR RF++VY+ LS +YN R+R+K E V S ++ ADW+ERE+WDM+
Sbjct: 127 TAIDVPSRQYRFELVYNLLSLRYNSRIRIKTYTDELTPVDSAYSVFQVADWYEREIWDMF 186
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD+ K++V P+EL QE R ++
Sbjct: 187 GVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDECKRIVIEPLELAQEFRKFE 246
Query: 181 FLSPWEGVNSLFAKEDSKDDMS 202
+PWE + + + +S
Sbjct: 247 LAAPWEQFPNFRDAPPAAETIS 268
>gi|225557350|gb|EEH05636.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus G186AR]
Length = 288
Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ ++ EL++ + ++ +FL+ + ++D+
Sbjct: 74 SASLHKYGQYLMSCLPKYIQQFSVWKDELTIYIPPSGVIPTFTFLKQHTAAEYTQVVDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF R RF+VVY+ LS ++N R+RVK E VPSI +Y GA W+EREV+D++G
Sbjct: 134 AVDFPGRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITCLYDGALWYEREVYDLFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF HPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q RD+
Sbjct: 194 VFFVDHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLEMTQAFRDFQG 253
Query: 181 FLSPWEGVNSLFAKEDSK 198
S WE + K S+
Sbjct: 254 GSSAWEQIGDGIDKTPSE 271
>gi|240277991|gb|EER41498.1| NADH-ubiquinone oxidoreductase subunit [Ajellomyces capsulatus
H143]
gi|325096052|gb|EGC49362.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus H88]
Length = 288
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+++ ++ EL++ + ++ +FL+ + ++D+
Sbjct: 74 SASLHKYGQYLMSCLPKYIQQFSVWKDELTIYIPPSGVIPTFTFLKQHTAAEYTQVVDIT 133
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF R RF+VVY+ LS ++N R+RVK E VPSI +Y GA W+EREV+D++G
Sbjct: 134 AVDFPGRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITCLYDGALWYEREVYDLFG 193
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF HPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+E+ Q RD+
Sbjct: 194 VFFVDHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLEMTQAFRDFQG 253
Query: 181 FLSPWEGVNSLFAKEDSK 198
S WE + K S+
Sbjct: 254 GSSAWEQIGDGIDKTPSE 271
>gi|329889334|ref|ZP_08267677.1| NADH-quinone oxidoreductase subunit C [Brevundimonas diminuta ATCC
11568]
gi|328844635|gb|EGF94199.1| NADH-quinone oxidoreductase subunit C [Brevundimonas diminuta ATCC
11568]
Length = 177
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 88/175 (50%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR 85
+ GEL+L +V + + LRD F +D+CG D+ R+ RF+VVYH LS
Sbjct: 2 AYGELTLIAQREKIVEVMTALRD--QFGFQQCMDVCGADYPDRAERFEVVYHLLSLTRAA 59
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
R+RVK++ E K VPS+ +YP A WFERE +DMYG+ F HPD+RRILTDYGF+GHPLR
Sbjct: 60 RVRVKVSTDEVKPVPSVSSVYPSAGWFEREAFDMYGMIFSDHPDMRRILTDYGFQGHPLR 119
Query: 146 KDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNS--LFAKEDSK 198
KDFP+TG+VE+ YD++ K++VY PV+L QE R++DFLSPWEG + + ++
Sbjct: 120 KDFPMTGYVEVRYDEEQKRIVYEPVKLTQEFRNFDFLSPWEGADYPTVLPGDEKA 174
>gi|67043755|gb|AAY63976.1| NADH dehydrogenase [Lysiphlebus testaceipes]
Length = 267
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 126/200 (63%), Gaps = 1/200 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++D G Y+ V+ + G EL + + + +FLRD + + ++D+
Sbjct: 57 TQLKDFGHYVAECLPKYVQKVQIAAGDELEVCIAPEGIRPTMAFLRDHHNAQYSILVDIT 116
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD S+ RF+++Y LS +YN R+RVK E V S+V ++ A+W+EREVWDMYG
Sbjct: 117 AVDVPSKPFRFELIYCLLSLRYNTRIRVKSYTDELTPVDSVVPVFKSANWYEREVWDMYG 176
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F HPD+RRILTDYGFEGHPLRKDFP++GFVE+ YDD+VK++V P+EL QE R ++
Sbjct: 177 ILFSDHPDMRRILTDYGFEGHPLRKDFPLSGFVEVRYDDEVKRIVAEPLELAQEFRRFEL 236
Query: 182 LSPWEGVNSLFAKEDSKDDM 201
+PWE + + +++
Sbjct: 237 SAPWEQFPNFRDPVKASEEI 256
>gi|225718856|gb|ACO15274.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial precursor
[Caligus clemensi]
Length = 264
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 89/200 (44%), Positives = 130/200 (65%), Gaps = 1/200 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + D G Y+ S V+ + EL L + ++ + SFL+D + F N++DLC
Sbjct: 56 QNLSDFGQYVAESMPKYVQKVQLTAGDELELLIHPDGVIPVISFLKDHHNAQFTNLVDLC 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D +R NRF+++Y+ LS ++N R+RVK E + SI I+ A+W+EREVWDMYG
Sbjct: 116 GLDVPTRKNRFEIIYNLLSLRFNSRVRVKTYTDELSPIDSIEDIHKAANWYEREVWDMYG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHPLRKDFP+TGF EL YD + +++V PVEL QE+R +D
Sbjct: 176 VYFSNHPDLRRILTDYGFEGHPLRKDFPLTGFYELRYDMEHQRIVQEPVELAQEYRKFDL 235
Query: 182 LSPWEGVNSLFAKEDSKDDM 201
+PWE + + +++
Sbjct: 236 AAPWEQFPNFREPLSAAEEV 255
>gi|159464845|ref|XP_001690652.1| NADH:ubiquinone oxidoreductase ND9 subunit [Chlamydomonas
reinhardtii]
gi|158280152|gb|EDP05911.1| NADH:ubiquinone oxidoreductase ND9 subunit [Chlamydomonas
reinhardtii]
Length = 282
Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats.
Identities = 92/187 (49%), Positives = 122/187 (65%), Gaps = 7/187 (3%)
Query: 7 DLGDYIVNSFSGSVR-------FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
L DYI+ + V+ + E ++ LV L FLRD + F ++D
Sbjct: 92 QLTDYIIKTVPKFVKMAVTGPAQSSVLYQEPTIYTTPESLVPLMVFLRDHTNTQFKCLLD 151
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VDF R+ RF+VVYH LSP++N R+RVK+ V E +VP++ ++ A+WFERE WDM
Sbjct: 152 VTAVDFPERAARFEVVYHLLSPRWNNRIRVKVCVDEVTAVPTLCKVFNTANWFERETWDM 211
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+G+FF GHPDLRRILTDYGF GHPLRKDFP+TG+ E+ YD K+VV P+EL QE R +
Sbjct: 212 FGVFFSGHPDLRRILTDYGFTGHPLRKDFPMTGYQEVRYDYGKKRVVSEPLELTQEFRYF 271
Query: 180 DFLSPWE 186
DF SPWE
Sbjct: 272 DFNSPWE 278
>gi|115975222|ref|XP_001178712.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein
3, 30kDa (NADH-coenzyme Q reductase) [Strongylocentrotus
purpuratus]
Length = 258
Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 90/207 (43%), Positives = 134/207 (64%), Gaps = 8/207 (3%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ + G+Y+ + V+ + G EL + + ++ + +FLRD + F ++ID+
Sbjct: 50 RLVEFGNYVADCLPKYVQEVQVTYGNELEVMIHPEGIIPVITFLRDHHNAQFKSLIDITA 109
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD +RS RF++VY+ LS +YN R+R+K E +V S+V ++ ADW EREVWDMYG+
Sbjct: 110 VDVPTRSQRFELVYNLLSLRYNERIRIKTYTDELSAVDSLVPVFKAADWLEREVWDMYGV 169
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHPLRKDFP++GFVE+ YDD++K+VV P+E+ QE R +D
Sbjct: 170 FFANHPDLRRILTDYGFEGHPLRKDFPLSGFVEVRYDDELKRVVAEPLEMTQEFRKFDLS 229
Query: 183 SPW-------EGVNSLFAKEDSKDDMS 202
SPW E + ++++ S
Sbjct: 230 SPWESFPNHREPAPEQLEQGKTEEEKS 256
>gi|302895891|ref|XP_003046826.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727753|gb|EEU41113.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 290
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL++ + + + SFL+ + F + +
Sbjct: 76 ADNMHRYGAWLMGCLPKYIQQFSVWKDELTIYISPSGVYPVFSFLKYNTAAEFTQVSTVT 135
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ +R NRF++VY+ LS ++N R+RVK E VPSI G++ GA+W+EREV+D+YG
Sbjct: 136 AADYPTRENRFEIVYNLLSVRHNSRIRVKTYADEASPVPSITGLFDGANWYEREVYDLYG 195
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 196 VFFAGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRYDEEKKRIVTEPLELTQAFRNFEG 255
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 256 GSSAWEPVG 264
>gi|156060183|ref|XP_001596014.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Sclerotinia sclerotiorum 1980]
gi|154699638|gb|EDN99376.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
precursor [Sclerotinia sclerotiorum 1980 UF-70]
Length = 292
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL + + ++ + SFL+ + F + D+
Sbjct: 78 ADDLHRYGSWLMGCLPKYIQQFSVWKDELVIYISPSGVIPVFSFLKYNTAAEFTQVSDIT 137
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF++VY+ LS ++N R+R+K E VPSI +Y GA+W+EREV+D++G
Sbjct: 138 AVDFPTRDQRFEIVYNLLSVRHNSRIRIKTYADEASPVPSICSLYDGANWYEREVYDLFG 197
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 198 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYDEEKKRIVVEPLELTQAFRNFEG 257
Query: 182 LS-PWEGVN 189
+ WE V
Sbjct: 258 GTAAWEQVG 266
>gi|148555891|ref|YP_001263473.1| NADH (or F420H2) dehydrogenase subunit C [Sphingomonas wittichii
RW1]
gi|148501081|gb|ABQ69335.1| NADH (or F420H2) dehydrogenase, subunit C [Sphingomonas wittichii
RW1]
Length = 217
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 85/186 (45%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
+ + A + VGE++L V+ LV LRD + ++++ GVD+ R+ RF+
Sbjct: 23 AALGARLIEARSCVGEIALHVERASLVETMRILRD--ELAYQQLMEIAGVDYPDRAERFE 80
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
VVY LS N R+RV + E + VPS+ G++P A W EREV+DMYG+ FEG+ DLRRI
Sbjct: 81 VVYCLLSVTKNHRIRVHVGTDEVQPVPSVTGLWPVAGWLEREVFDMYGVLFEGNADLRRI 140
Query: 134 LTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFA 193
LTDYGF GHP RKDFP+TG+VEL Y + K+VVY PV+L Q+ R ++F+SPWEG + +
Sbjct: 141 LTDYGFRGHPQRKDFPLTGYVELRYSEAHKRVVYEPVKLAQDFRSFEFMSPWEGADYILP 200
Query: 194 KEDSKD 199
++ +
Sbjct: 201 GDEKAE 206
>gi|33943525|gb|AAQ55457.1| putative NADH dehydrogenase subunit 9 precursor [Chlamydomonas
reinhardtii]
Length = 282
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 93/187 (49%), Positives = 123/187 (65%), Gaps = 7/187 (3%)
Query: 7 DLGDYIVNSFSGSVR-------FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
L DYI+ + V+ + E ++ LV L FLRD + F ++D
Sbjct: 92 QLTDYIIKTVPKFVKMAVTGPAQSSVLYQEPTIYTTPESLVPLMVFLRDHTNTQFKCLLD 151
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VDF SR+ RF+VVYH LSP++N R+RVK+ V E +VP++ ++ A+WFERE WDM
Sbjct: 152 VTAVDFPSRAARFEVVYHLLSPRWNNRIRVKVCVDEVTAVPTLCKVFNTANWFERETWDM 211
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+G+FF GHPDLRRILTDYGF GHPLRKDFP+TG+ E+ YD K+VV P+EL QE R +
Sbjct: 212 FGVFFSGHPDLRRILTDYGFTGHPLRKDFPMTGYQEVRYDYGKKRVVSEPLELTQEFRYF 271
Query: 180 DFLSPWE 186
DF SPWE
Sbjct: 272 DFNSPWE 278
>gi|331225012|ref|XP_003325177.1| NADH-ubiquinone oxidoreductase subunit [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309304167|gb|EFP80758.1| NADH-ubiquinone oxidoreductase subunit [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 270
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 88/173 (50%), Positives = 116/173 (67%), Gaps = 1/173 (0%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
V + EL+L +V +FLRD C + +ID+ GVD+ +R RF+VVYH
Sbjct: 74 YVEVSSVYKDELTLYTAPSGIVGTLTFLRDHKQCQYKQLIDISGVDYPTRPKRFEVVYHL 133
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
LS +Y RLRVK E VPS+ GI+ ADWFEREV+DM+G+FF HPDLRRILTDYG
Sbjct: 134 LSIQYASRLRVKTYADEVSPVPSVSGIFRSADWFEREVYDMFGVFFHNHPDLRRILTDYG 193
Query: 139 FEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD-FLSPWEGVNS 190
FEG+PLRKDFP+TG+ E+ YD++ K+VVY P++L Q R+++ SPWE
Sbjct: 194 FEGYPLRKDFPLTGYTEVRYDEEKKRVVYEPLQLSQAFRNFEGANSPWEQTGH 246
>gi|198427805|ref|XP_002131761.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein
3, (NADH-coenzyme Q reductase) [Ciona intestinalis]
Length = 275
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 87/195 (44%), Positives = 127/195 (65%), Gaps = 2/195 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+K+ + G+++ V+ + EL L VD +V + SFL+D+ F N+ D+
Sbjct: 69 QKLVEYGNFVSECLPKFVQQVQITHTNELELLVDPEYIVQVISFLKDNALSQFTNLSDIT 128
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R RF++VY+ LS YN+R+RVK E +V SIV I+ GA+W+ERE+WDM+G
Sbjct: 129 VVDVPTRPCRFELVYNLLSLAYNQRIRVKSYTDELTAVDSIVEIHEGANWYEREIWDMFG 188
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF+ HPDLRRILTDYGF+GHP RKDFP++G+ E+ YDD+ +++V P+E+ QE R +D
Sbjct: 189 VFFKNHPDLRRILTDYGFDGHPFRKDFPLSGYYEVRYDDETERIVREPLEMAQEFRKFDL 248
Query: 182 LSPWEG-VNSLFAKE 195
SPWE E
Sbjct: 249 TSPWEAFPKYRKPAE 263
>gi|11467145|ref|NP_054446.1| NADH dehydrogenase subunit 9 [Marchantia polymorpha]
gi|786229|gb|AAC09443.1| ORF212 [Marchantia polymorpha]
Length = 212
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ ++ + + S E L + L L FL+ + F +ID+
Sbjct: 18 MDNQL--FFKSLIATLPKWIHKCQTSKHENILYTNPNSLFQLLYFLKYHTNTRFKVLIDI 75
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ SR RF+VVY+ LS YN R+R+ +V E + S+V I+P A W+ERE WDM+
Sbjct: 76 CGVDYPSRKRRFEVVYNLLSIDYNTRIRILTSVDEITPICSVVSIFPSAGWWERETWDMF 135
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G++F HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +D
Sbjct: 136 GVYFSNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVVSEPIEMTQEFRYFD 195
Query: 181 FLSPWEGVNSLFAKEDS 197
F SPWE ++
Sbjct: 196 FASPWEQMSRSDESNQK 212
>gi|312376047|gb|EFR23253.1| hypothetical protein AND_13232 [Anopheles darlingi]
Length = 293
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 127/200 (63%), Gaps = 1/200 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ D G Y+ V+ S EL + + +V + FL+D + F N++D+ G
Sbjct: 88 ELSDFGKYVAECMPKYVQKVQLTSGDELEVLIAPEGVVPVLQFLKDHHNSQFANLVDIAG 147
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+D SR+ RF+++Y+ LS +YN R+RVK E + S ++ A+W+ERE+WDMYG+
Sbjct: 148 MDVPSRAFRFEIIYNILSLRYNSRIRVKTYTDELTPIDSCNEVFKAANWYEREIWDMYGV 207
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHP R+DFP++G+VEL YDD+ K+VV P+EL QE R +D
Sbjct: 208 FFANHPDLRRILTDYGFEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLS 267
Query: 183 SPWEGVNSLFAKEDSKDDMS 202
+PWE + + ++++
Sbjct: 268 APWEQFPNFRNANPATEEVA 287
>gi|46134189|ref|XP_389410.1| hypothetical protein FG09234.1 [Gibberella zeae PH-1]
Length = 290
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ V+ EL++ + + + SFL+ + F + +
Sbjct: 76 SDNMHRYGAWVMGCLPKYVQQFSVWKDELTIYISPSGVYPVFSFLKYNTAAEFTQVSTIT 135
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ +R NRF++VY+ LS ++N R+RVK E VPSI G++ GA+W+EREV+D+YG
Sbjct: 136 AADYPTRENRFEIVYNLLSVRHNSRIRVKTYADEASPVPSITGLFDGANWYEREVYDLYG 195
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGFEGHPLRKDFP+TG+ E+ YD++ K++V P+EL Q R+++
Sbjct: 196 VFFAGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRYDEEKKRIVTEPLELTQAFRNFEG 255
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 256 GSSAWEPVG 264
>gi|297493930|gb|ADI40687.1| NADH dehydrogenase Fe-S protein 3, 30kDa [Miniopterus schreibersii]
Length = 203
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F ++ DL
Sbjct: 22 KQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGIIPVLTFLRDHTNAQFKSLADLT 81
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G
Sbjct: 82 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPLESTVSVYKAANWYEREIWDMFG 141
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 142 VFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDL 201
Query: 182 LS 183
S
Sbjct: 202 NS 203
>gi|146420605|ref|XP_001486257.1| hypothetical protein PGUG_01928 [Meyerozyma guilliermondii ATCC
6260]
gi|146389672|gb|EDK37830.1| hypothetical protein PGUG_01928 [Meyerozyma guilliermondii ATCC
6260]
Length = 282
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 88/189 (46%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G YI+ ++ EL L V L FL+ F +++D+
Sbjct: 67 NEELHKFGRYIMGCMPKYIQQFSVWKDELVLYVAPSALRPTMLFLKHHTPADFKSVMDVT 126
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D+ SR+NRFDVVY+ LS ++N R+RVK +E +VPS+V ++ GA+WFERE +D++G
Sbjct: 127 AADYPSRTNRFDVVYNLLSVRHNSRIRVKTYASETTAVPSVVPLFEGANWFERETYDLFG 186
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFFEGHPDLRRI+TDYGFEGHPLRKDFP TG+ E+ YD++ K+VVY P+EL Q R++
Sbjct: 187 IFFEGHPDLRRIMTDYGFEGHPLRKDFPTTGYTEIRYDEEKKRVVYEPLELTQAFRNFSV 246
Query: 182 LSP-WEGVN 189
S WE V
Sbjct: 247 GSSVWEPVG 255
>gi|2828209|sp|P34944|NDUS3_MARPO RecName: Full=NADH-ubiquinone oxidoreductase 27 kDa subunit;
AltName: Full=Complex I-27kD; Short=CI-27kD; AltName:
Full=NADH dehydrogenase subunit 9
Length = 195
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ ++ + + S E L + L L FL+ + F +ID+
Sbjct: 1 MDNQL--FFKSLIATLPKWIHKCQTSKHENILYTNPNSLFQLLYFLKYHTNTRFKVLIDI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ SR RF+VVY+ LS YN R+R+ +V E + S+V I+P A W+ERE WDM+
Sbjct: 59 CGVDYPSRKRRFEVVYNLLSIDYNTRIRILTSVDEITPICSVVSIFPSAGWWERETWDMF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G++F HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +D
Sbjct: 119 GVYFSNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVVSEPIEMTQEFRYFD 178
Query: 181 FLSPWEGVNSLFAKEDS 197
F SPWE ++
Sbjct: 179 FASPWEQMSRSDESNQK 195
>gi|330994056|ref|ZP_08317986.1| NADH-quinone oxidoreductase subunit C [Gluconacetobacter sp.
SXCC-1]
gi|329759002|gb|EGG75516.1| NADH-quinone oxidoreductase subunit C [Gluconacetobacter sp.
SXCC-1]
Length = 224
Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 89/179 (49%), Positives = 122/179 (68%), Gaps = 1/179 (0%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ A GEL + L++L S LRDDP ++D+CGVDF R+ RFDVVY+ L
Sbjct: 36 ILSASIEKGELVVRTTRTRLLALMSLLRDDPRYACQQVMDICGVDFPERAERFDVVYNLL 95
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S +N R+RV + E +VPS+ ++P A W+ERE +D++GI F PDLRRILTDYGF
Sbjct: 96 SVTHNHRIRVIVTTDETSAVPSVHQLWPAATWWEREAYDLFGILFTDQPDLRRILTDYGF 155
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSK 198
EGHPLRKDFP+TG+VEL YD++ ++VVY PV L+Q+ R++DF SPWEG+ ++
Sbjct: 156 EGHPLRKDFPLTGYVELRYDEERRQVVYEPVNLVQDFRNFDFESPWEGI-LTLPGDEKA 213
>gi|148675792|gb|EDL07739.1| mCG50233, isoform CRA_a [Mus musculus]
Length = 214
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ +Y+ V+ S + +L + + ++ +FLRD + F ++ DL
Sbjct: 6 KQLSAFAEYVAEILPKYVQQVQVSCLDKLEICIHHDGVIPTLTFLRDHTNAQFKSLADLT 65
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+EREVWDM+G
Sbjct: 66 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFG 125
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF HPDLRRILTDYGFEGHP RKDFP+ G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 126 VFFFNHPDLRRILTDYGFEGHPFRKDFPLAGYVELRYDDEVKRVVAEPVELAQEFRKFDL 185
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 186 NSPWEAFPAYRQPPES 201
>gi|296283831|ref|ZP_06861829.1| NADH (or F420H2) dehydrogenase, subunit C [Citromicrobium
bathyomarinum JL354]
Length = 283
Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats.
Identities = 86/194 (44%), Positives = 120/194 (61%), Gaps = 2/194 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
I+ L D + + + A GEL L V L LRDD + ++++ GVD
Sbjct: 14 IDGLKDTLSGALGEMLVEAKEEHGELLLSVQRDRLEDALRLLRDDH--GYQQLMEIAGVD 71
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ R RF+VVY LS N R+ VK+ +E VP+ ++P A W EREV+D+YG+ F
Sbjct: 72 YPGRPERFEVVYMLLSLTKNSRIMVKVTASETTPVPTATTLWPNAGWLEREVFDLYGVVF 131
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
G+ DLRRILTDYGFEGHP RKDFP+TG+VEL Y ++ ++VVY PVEL Q+ R +DF+SP
Sbjct: 132 AGNMDLRRILTDYGFEGHPFRKDFPLTGYVELRYSEEEQRVVYEPVELAQDLRQFDFMSP 191
Query: 185 WEGVNSLFAKEDSK 198
WEG + + ++
Sbjct: 192 WEGADYVLPGDEKA 205
>gi|115957411|ref|XP_796382.2| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein
3, 30kDa (NADH-coenzyme Q reductase) [Strongylocentrotus
purpuratus]
Length = 256
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 90/207 (43%), Positives = 134/207 (64%), Gaps = 8/207 (3%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ + G+Y+ + V+ + G EL + + ++ + +FLRD + F ++ID+
Sbjct: 48 RLVEFGNYVADCLPKYVQEVQVTYGNELEVMIHPEGIIPVITFLRDHHNAQFKSLIDITA 107
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD +RS RF++VY+ LS +YN R+R+K E +V S+V ++ ADW EREVWDMYG+
Sbjct: 108 VDVPTRSQRFELVYNLLSLRYNERIRIKTYTDELSAVDSLVPVFKAADWLEREVWDMYGV 167
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHPLRKDFP++GFVE+ YDD++K+VV P+E+ QE R +D
Sbjct: 168 FFANHPDLRRILTDYGFEGHPLRKDFPLSGFVEVRYDDELKRVVAEPLEMTQEFRKFDLS 227
Query: 183 SPW-------EGVNSLFAKEDSKDDMS 202
SPW E + ++++ S
Sbjct: 228 SPWESFPNHREPAPEQLEQGKTEEEKS 254
>gi|38638287|ref|NP_943683.1| NADH dehydrogenase subunit 9 [Chara vulgaris]
gi|32966601|gb|AAP92184.1| NADH dehydrogenase subunit 9 [Chara vulgaris]
Length = 188
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ ++ + + + S E+ + + +L + FL++ + F +ID+
Sbjct: 1 MHNQL--FFKSLIATLPKWINKSKISKKEICIYTNPDNLFQMFFFLKNHTNTRFRVLIDI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ SR +RF+VVY+ LS +YN RLRV V E + S+V I+P A W+EREVWDM+
Sbjct: 59 CGVDYPSRKDRFEVVYNLLSIQYNSRLRVHTRVDEITPICSVVKIFPAAGWWEREVWDMF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G++F HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+V+ P+E+ QE R +D
Sbjct: 119 GVYFSNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVISEPIEMTQEFRYFD 178
Query: 181 FLSPW 185
F SPW
Sbjct: 179 FSSPW 183
>gi|321455691|gb|EFX66817.1| hypothetical protein DAPPUDRAFT_115970 [Daphnia pulex]
Length = 202
Score = 217 bits (552), Expect = 8e-55, Method: Composition-based stats.
Identities = 89/181 (49%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Query: 7 DLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
D G Y+ V+ + EL + + +V + FL+D C F ++ D+ +D
Sbjct: 2 DFGLYVAECMPKYVQKVQIVTGNELEVLIAPDGIVPVLQFLKDHHQCQFASLADIGAMDV 61
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
SR NRF+V+Y+ LS ++N R+RVK E V S ++ ADW+EREVWDMYG+FF
Sbjct: 62 PSRENRFEVIYNLLSLRFNSRIRVKSYTDELTPVDSSYEVFKAADWYEREVWDMYGVFFA 121
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGFEGHP RKDFP+TG+VE+ YDD+ K+VV PVEL QE R +D SPW
Sbjct: 122 NHPDLRRILTDYGFEGHPFRKDFPLTGYVEVRYDDEAKRVVVEPVELAQEFRKFDLSSPW 181
Query: 186 E 186
E
Sbjct: 182 E 182
>gi|261205336|ref|XP_002627405.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Ajellomyces
dermatitidis SLH14081]
gi|239592464|gb|EEQ75045.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Ajellomyces
dermatitidis SLH14081]
gi|239611381|gb|EEQ88368.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Ajellomyces
dermatitidis ER-3]
gi|327348610|gb|EGE77467.1| NADH-ubiquinone oxidoreductase 27 kDa subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 287
Score = 217 bits (552), Expect = 8e-55, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ G Y+++ ++ EL++ V ++ FL+ + ++D+ VD
Sbjct: 76 LHKYGQYLMSCLPKYIQQFSVWKDELTIYVPPSGIIPTFVFLKQHTAAEYTQVVDITAVD 135
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
F SR RF+VVY+ LS ++N R+RVK E VPSI +Y GA W+EREV+D++G+FF
Sbjct: 136 FPSRDQRFEVVYNLLSVRHNSRIRVKTYADEATPVPSITCLYDGALWYEREVYDLFGVFF 195
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD-FLS 183
HPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ Y ++ K++V P+E+ Q RD+ S
Sbjct: 196 VDHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRYCEEKKRIVVEPLEMTQAFRDFRAGSS 255
Query: 184 PWEGVNSLFAKEDSK 198
WE V K S+
Sbjct: 256 AWEQVGEGIDKTPSE 270
>gi|313227735|emb|CBY22884.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 2/199 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ + G YI V+ EL + + + + SFL+D F ++ D+
Sbjct: 71 EKLANFGAYIAQVLPKYVQLVQVTDQNELEICIHPAGIRPVHSFLKDHSLARFESMSDMT 130
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMY 120
VD +R NRF++VY LS +N R+R+K E V S+ ++P +W+ERE WDMY
Sbjct: 131 AVDVPNRQNRFEMVYCLLSTHFNARIRIKSYTNELNPVDSLAADLFPSCNWYERECWDMY 190
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G++F GHPDLRRILTDYGF+GHP RKDFP+TG+ E+ YDD + +VV P+EL QE+R +D
Sbjct: 191 GVYFNGHPDLRRILTDYGFQGHPQRKDFPLTGYYEVRYDDDLMRVVQEPLELAQEYRKFD 250
Query: 181 FLSPWEGVNSLFAKEDSKD 199
+PWE + + D
Sbjct: 251 LKNPWEVFPNFRDASELDD 269
>gi|260818990|ref|XP_002604665.1| hypothetical protein BRAFLDRAFT_167919 [Branchiostoma floridae]
gi|229289993|gb|EEN60676.1| hypothetical protein BRAFLDRAFT_167919 [Branchiostoma floridae]
Length = 202
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 80/187 (42%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ G+Y+ V+ S EL + + +V + SFL+D + F ++ D
Sbjct: 9 MRNQLTVFGEYVAECLPKYVQTVQVTSQNELEVLISPEGVVPVLSFLKDHHNAQFKSLAD 68
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD ++ RF++VY +S YN R+RV+ E + S ++ ADW+ERE WDM
Sbjct: 69 IACVDMPTKPYRFELVYMLMSLTYNSRIRVRTYTDEITPIESCYSVFKAADWYEREAWDM 128
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG++F HPDLRRILTDYGFEGHP RKDFP++G+VE+ YD+++K++V PVEL QE R +
Sbjct: 129 YGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEIRYDNELKRIVQEPVELAQEFRKF 188
Query: 180 DFLSPWE 186
D S WE
Sbjct: 189 DLSSTWE 195
>gi|221128571|ref|XP_002163056.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein
3, (NADH-coenzyme Q reductase) [Hydra magnipapillata]
Length = 268
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ + G ++ +S V+ A EL + + ++ + +FLRD + F ++D+
Sbjct: 65 TTRLMEFGQFVSDSMPKFVQSAEVTEGDELQVLISPDGIIPILTFLRDHTNAQFKQLMDI 124
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ S+ RF++VY+ LS +YN R+RVK E + S ++ A+W ERE+WDMY
Sbjct: 125 TAVDWPSKPYRFEIVYNLLSVRYNTRIRVKTYTDELTPLDSASSLFHSANWAEREIWDMY 184
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGFEGHPLRKDFP++GF E+ YD ++K++V PVEL QE R ++
Sbjct: 185 GVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGFYEIRYDSELKRLVQDPVELAQEFRKFE 244
Query: 181 FLSPWEGVN 189
SPWE
Sbjct: 245 LQSPWEQFP 253
>gi|22550347|ref|NP_689378.1| NADH dehydrogenase subunit 9 [Chaetosphaeridium globosum]
gi|22417013|gb|AAM96612.1|AF494279_17 NADH dehydrogenase subunit 9 [Chaetosphaeridium globosum]
Length = 187
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 119/185 (64%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + + ++ + ++ A S E L +D +V L FL+ + F +D+
Sbjct: 1 MNLMHNFVQNLIATLPLWIKKAQISKNESILYIDSDYIVPLLYFLKHHTNARFQICVDIT 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ SR RF++VY+ LS +YN R+R+ +V E V S+ I+ A WFEREVWDM+G
Sbjct: 61 AVDYPSRKQRFEIVYNLLSVQYNSRIRIHTSVDEITPVNSVTAIFASAGWFEREVWDMFG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+V+ P+E+ QE R +DF
Sbjct: 121 VYFSNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVISEPIEMAQEFRYFDF 180
Query: 182 LSPWE 186
S W+
Sbjct: 181 ASTWK 185
>gi|256088184|ref|XP_002580233.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|238665758|emb|CAZ36472.1| NADH-ubiquinone oxidoreductase mitochondrial precursor, putative
[Schistosoma mansoni]
Length = 270
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 1/201 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ ++ G Y+ V+ EL + + ++ + SFL+ + F+N+ D+
Sbjct: 50 IERLSSFGVYVGECLPKFVQKVQIGHTKELEICIHPDGIIPVLSFLKCHHNAQFLNLSDI 109
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD SR RF +VY+ LS +YN R+RV E + S I+ ++W+EREVWDMY
Sbjct: 110 TAVDIPSRKYRFQIVYNLLSLRYNSRIRVLTYTDELTPIDSSCSIFQASNWYEREVWDMY 169
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGF GHP R+DFP++G+ E+ YDD+ +VV PVEL QE R ++
Sbjct: 170 GVFFHDHPDLRRILTDYGFIGHPQRRDFPLSGYTEMRYDDQYYRVVIEPVELAQEFRRFE 229
Query: 181 FLSPWEGVNSLFAKEDSKDDM 201
F SPWE + +++
Sbjct: 230 FNSPWEAFPAFRDSSSQDENL 250
>gi|110225659|ref|YP_665665.1| NADH dehydrogenase subunit 9 [Nephroselmis olivacea]
gi|6066174|gb|AAF03192.1|AF110138_24 NADH dehydrogenase subunit 9 [Nephroselmis olivacea]
Length = 189
Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 95/181 (52%), Positives = 122/181 (67%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E I++ V+ +V EL L V LV L FLR+ + F ++D CGVD+
Sbjct: 3 EQFEQSIISILPKWVKSSVRVENELILSVSPEHLVPLLFFLRNHTNTQFELLVDACGVDY 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
SR RF++VY LS +YN RLR+K+AV E +PS +YP A W ERE WDMYGIFF
Sbjct: 63 PSRPLRFEMVYQLLSVQYNSRLRIKVAVDEFTPIPSATEVYPSAGWLEREAWDMYGIFFS 122
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGFEGHPLRKDFP+TG+ E+ YDD K+VV P+++ QE+R ++FLSPW
Sbjct: 123 NHPDLRRILTDYGFEGHPLRKDFPLTGYTEVRYDDSEKRVVIEPIQMTQEYRYFNFLSPW 182
Query: 186 E 186
+
Sbjct: 183 D 183
>gi|262186746|ref|YP_003276005.1| NADH dehydrogenase subunit 9 [Pleurozia purpurea]
gi|237780743|gb|ACR19389.1| NADH dehydrogenase subunit 9 [Pleurozia purpurea]
Length = 212
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 86/197 (43%), Positives = 118/197 (59%), Gaps = 2/197 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ ++ + + S E L + L L F + + F +ID+
Sbjct: 18 MHNQL--FLKSLIATLPKWIHKCQTSKHENILYTNPNSLFQLLYFPKYHTNTRFKVLIDI 75
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD SR RF+VVY+ LS YN R+R+ V E + S+VGI+P A W+ERE WDM+
Sbjct: 76 RGVDHPSRKRRFEVVYNLLSIDYNTRIRILTGVDEITPICSVVGIFPSAGWWERETWDMF 135
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G++F HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +D
Sbjct: 136 GVYFSNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVVSEPIEMTQEFRYFD 195
Query: 181 FLSPWEGVNSLFAKEDS 197
F SPWE ++
Sbjct: 196 FASPWEQMSRSDGSNQK 212
>gi|114327964|ref|YP_745121.1| NADH-quinone oxidoreductase chain C [Granulibacter bethesdensis
CGDNIH1]
gi|114316138|gb|ABI62198.1| NADH-quinone oxidoreductase chain C [Granulibacter bethesdensis
CGDNIH1]
Length = 205
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 1/179 (0%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
V A E+ ++V L ++ LRDDP ++D+CGVD+ SRS RFDVVY+ L
Sbjct: 11 VTRAQLEKNEVVVEVTRDQLEAVALTLRDDPRFLCQQLMDVCGVDWPSRSPRFDVVYNLL 70
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S N R+R+ + +G VPS+ I+P A WFERE WD++GI F G PD RRILTDYGF
Sbjct: 71 SISLNHRIRMIVGTDDGVPVPSVHTIWPVATWFERETWDLFGILFSGQPDHRRILTDYGF 130
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSK 198
EGHPLRKDFP+TG+VEL +D++ ++VVY PV+L Q+ R++DFLSPWEG+ ++
Sbjct: 131 EGHPLRKDFPLTGYVELRWDEERRQVVYEPVKLTQDFRNFDFLSPWEGMT-TLPGDEKA 188
>gi|308474977|ref|XP_003099708.1| CRE-NUO-2 protein [Caenorhabditis remanei]
gi|308266363|gb|EFP10316.1| CRE-NUO-2 protein [Caenorhabditis remanei]
Length = 284
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 16/203 (7%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRD------------- 48
++ + G Y V+ + G EL L + +V + SFL+
Sbjct: 53 ERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKVSFIDIILTEPINF 112
Query: 49 --DPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIY 106
+ F N+ + G+D +R NR +V+Y S ++N R+RV+ E + S+ ++
Sbjct: 113 QGNHSAQFTNLTFITGMDVPTRKNRLEVIYALYSVRFNARVRVRTYTDEIAPIDSVTPVF 172
Query: 107 PGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV 166
GADW+EREV+DMYG++F HPDLRRILTDYGFEGHP RKD+P++G+ E+ YD ++K+VV
Sbjct: 173 KGADWYEREVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPELKRVV 232
Query: 167 YRPVELMQEHRDYDFLSPWEGVN 189
Y P EL QE R +D +PWE
Sbjct: 233 YEPSELAQEFRKFDLNTPWEQFP 255
>gi|85374164|ref|YP_458226.1| NADH dehydrogenase I, C subunit [Erythrobacter litoralis HTCC2594]
gi|122544411|sp|Q2NA62|NUOC_ERYLH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|84787247|gb|ABC63429.1| NADH dehydrogenase I, C subunit [Erythrobacter litoralis HTCC2594]
Length = 250
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+V + V + GE+ + V+ + + LRDD + ++++ GVD+ R R
Sbjct: 20 LVKALGDYVAASHEKYGEIIITVERDAIEDVLRTLRDDHD--YQQLMEIAGVDYPERPER 77
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F+VVY LS N R+ VK++ E VP++ ++P A W EREV+D+YG+ F+G+ DLR
Sbjct: 78 FEVVYMLLSLTKNHRVMVKVSTDEKTPVPTVTTLWPNAGWLEREVFDLYGVLFDGNTDLR 137
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSL 191
RILTDYGFEGHP RKDFP+TG+ EL Y ++ ++VVY PVEL Q+ R +DFLSPWEG+
Sbjct: 138 RILTDYGFEGHPFRKDFPLTGYTELRYSEEEQRVVYEPVELAQDLRTFDFLSPWEGMTPP 197
Query: 192 FAKEDSKD 199
++ D
Sbjct: 198 LPGDEKAD 205
>gi|296116533|ref|ZP_06835143.1| NADH (or F420H2) dehydrogenase, subunit C [Gluconacetobacter
hansenii ATCC 23769]
gi|295976745|gb|EFG83513.1| NADH (or F420H2) dehydrogenase, subunit C [Gluconacetobacter
hansenii ATCC 23769]
Length = 221
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ A GEL + L+++ + LRDDP ++DLCGVD+ R+ RFDVVY+ L
Sbjct: 33 IISAGIEGGELVVRTTRPYLLAIMTMLRDDPRYACEQMMDLCGVDYPDRAERFDVVYNLL 92
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S +N R+RV + E + V S+ ++P A W+ERE +D++G+ F PDLRRILTDYGF
Sbjct: 93 SVTHNHRIRVIVTTDETQPVASVHRLWPSATWWERECYDLFGVLFADQPDLRRILTDYGF 152
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSK 198
EG+PLRKDFP+TG+VE YD++ ++VVY PV+L Q+ R++DF SPWEG+ ++
Sbjct: 153 EGYPLRKDFPLTGYVETRYDEERRQVVYEPVQLKQDFRNFDFESPWEGI-LTLPGDEKA 210
>gi|310816714|ref|YP_003964678.1| NADH dehydrogenase subunit C [Ketogulonicigenium vulgare Y25]
gi|308755449|gb|ADO43378.1| NADH dehydrogenase subunit C [Ketogulonicigenium vulgare Y25]
Length = 198
Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats.
Identities = 101/193 (52%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++DL Y+ + G+ A + GEL+L DL +L FLRDD C F ++D+ VD
Sbjct: 1 MQDLATYLRDMAPGAPT-AQLAYGELTLTSTLTDLPALLMFLRDDVQCRFSTLVDITAVD 59
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ +R RFD+VYHFLS N RLR+K+AVA+G+ PS + YP ADWFEREV+DM+GI F
Sbjct: 60 YPARIKRFDLVYHFLSMHLNHRLRLKVAVADGEMPPSAIPAYPAADWFEREVFDMFGILF 119
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
GHPDLRR+LTDYGF GHPLRKDFP TG+ E+ YD+ K+VV+ PV+L+Q +R +DFLSP
Sbjct: 120 TGHPDLRRLLTDYGFSGHPLRKDFPTTGYTEVLYDEVEKRVVHAPVQLVQAYRQFDFLSP 179
Query: 185 WEGVNSLFAKEDS 197
WEG+ + + +
Sbjct: 180 WEGMGNTLPGDQT 192
>gi|91208867|ref|YP_539028.1| NADH dehydrogenase subunit 9 [Physcomitrella patens]
gi|90991407|dbj|BAE93099.1| NADH dehydrogenase subunit 9 [Physcomitrella patens]
Length = 195
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/182 (48%), Positives = 119/182 (65%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ ++ + + S E L + L L FL+ + F +ID+CGVD+
Sbjct: 4 QSFFKSLIATLPKWIHQFQKSKHENILYTNPDYLFQLLWFLKYHTNTRFQVLIDICGVDY 63
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
SR RF+VVY+ LS +YN R+RV+ +V E + S V I+P A W+EREVWDM+G++F
Sbjct: 64 PSRKQRFEVVYNLLSIQYNSRIRVQTSVDEITPICSAVSIFPSAGWWEREVWDMFGVYFS 123
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPW
Sbjct: 124 NHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVVSEPIEMTQEFRYFDFASPW 183
Query: 186 EG 187
E
Sbjct: 184 EQ 185
>gi|85708752|ref|ZP_01039818.1| NADH dehydrogenase subunit C [Erythrobacter sp. NAP1]
gi|85690286|gb|EAQ30289.1| NADH dehydrogenase subunit C [Erythrobacter sp. NAP1]
Length = 259
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + S S + A GE+ L + + LRDD + ++++ G D+ R
Sbjct: 18 DALSESVSVWLDRAEEQHGEIILTAKRESIAEVLRILRDDH--AYQQMMEIAGADYPDRD 75
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
RF+VVY LS N R+ VK + E VPS+ ++P A W EREV+D+YG+ FEG+ D
Sbjct: 76 ERFEVVYMLLSLTKNHRIMVKCSTDETTPVPSVTSLWPNAGWLEREVFDLYGVVFEGNSD 135
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVN 189
LRRILTDYGFEGHP RKDFP+TG+ EL Y + K+VVY PVEL Q+ R +DFLSPWEG +
Sbjct: 136 LRRILTDYGFEGHPFRKDFPMTGYTELRYSEDEKRVVYEPVELPQDMRTFDFLSPWEGSD 195
Query: 190 SLFAKEDSKD 199
+ ++ D
Sbjct: 196 YVLPGDEKAD 205
>gi|258542720|ref|YP_003188153.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-01]
gi|256633798|dbj|BAH99773.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-01]
gi|256636857|dbj|BAI02826.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-03]
gi|256639910|dbj|BAI05872.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-07]
gi|256642966|dbj|BAI08921.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-22]
gi|256646021|dbj|BAI11969.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-26]
gi|256649074|dbj|BAI15015.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-32]
gi|256652061|dbj|BAI17995.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655118|dbj|BAI21045.1| NADH-quinone oxidoreductase chain C [Acetobacter pasteurianus IFO
3283-12]
Length = 219
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 83/183 (45%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
+V +A GEL + ++ L+ LRD P F ++DLCGVDF R RF+VVY+
Sbjct: 30 AVSYAAVEKGELVVRIERDHLLHFFELLRDHPSYRFEQLMDLCGVDFPERPQRFEVVYNL 89
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
LS +N R+RV + E VPS+ ++P A W+ERE +D++G+ F G PD+RRILTD G
Sbjct: 90 LSVTHNHRIRVIVQTDEVTPVPSVHHLWPCATWWERECYDLFGVVFSGQPDMRRILTDNG 149
Query: 139 FEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSK 198
FEGHPLRKDFP+TG+ ++ YD + ++VV PV L Q+ RD+DF+SPWEG+ ++
Sbjct: 150 FEGHPLRKDFPLTGYEQVRYDVERRQVVKEPVSLTQDFRDFDFVSPWEGM-LTLPGDEKA 208
Query: 199 DDM 201
++
Sbjct: 209 HEV 211
>gi|34765759|gb|AAQ82457.1| NADH-ubiquinone oxidoreductase 30.4 kDa subunit [Armillariella
tabescens]
Length = 270
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y+ ++ EL+L ++ + +FLRD C F +++D+
Sbjct: 59 AEALHTYGSYLTQCLPKFIQQFSVLKDELTLYTAPSGIIPVLTFLRDHAQCQFKSVVDIS 118
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G D+ R RF+VVYH LS K R+RVK EG VPS V + GADW+ERE WD++G
Sbjct: 119 GADYPDREKRFEVVYHLLSVKQAGRIRVKTYAGEGDHVPSAVKSFRGADWYEREAWDLFG 178
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F HPDLRRILTDYGFEG K P+TG+ EL D++ K+VVY P++L Q R+++
Sbjct: 179 ISFSDHPDLRRILTDYGFEGTLYAKTSPLTGYTELRCDEERKRVVYEPLQLTQAFRNFES 238
Query: 182 LSPWE----GVNSLFAKEDS 197
LSPWE G + +
Sbjct: 239 LSPWEQVGDGTKAPRPENLK 258
>gi|29841214|gb|AAP06227.1| SJCHGC06115 protein [Schistosoma japonicum]
gi|226478696|emb|CAX72843.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 3
[Schistosoma japonicum]
gi|257205792|emb|CAX82547.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 3
[Schistosoma japonicum]
gi|257206566|emb|CAX82911.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 3
[Schistosoma japonicum]
Length = 259
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 79/186 (42%), Positives = 114/186 (61%), Gaps = 1/186 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ ++ G Y+ V+ EL + + ++ + SFL+ + F+N+ D+
Sbjct: 40 IDRLSVFGTYVGECLPKFVQKVQMGHTKELEICIHPDGIIPVLSFLKYHHNAQFLNLSDI 99
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD SR RF +VY+ LS +YN R+RV E V S ++ ++W+EREVWDMY
Sbjct: 100 TAVDIPSRKYRFQIVYNLLSLRYNSRIRVLTYTDELTPVDSSCSVFQASNWYEREVWDMY 159
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGF GHP RKDFP++G+ E+ +D++ +VV PVEL QE R ++
Sbjct: 160 GVFFYDHPDLRRILTDYGFVGHPQRKDFPLSGYTEMRFDEEYCRVVIEPVELAQEFRRFE 219
Query: 181 FLSPWE 186
F SPWE
Sbjct: 220 FNSPWE 225
>gi|329114680|ref|ZP_08243439.1| NADH-quinone oxidoreductase subunit C [Acetobacter pomorum DM001]
gi|326696160|gb|EGE47842.1| NADH-quinone oxidoreductase subunit C [Acetobacter pomorum DM001]
Length = 219
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 118/182 (64%), Gaps = 1/182 (0%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
V +A GEL + ++ L+ LRD P F ++DLCGVDF R RFDVVY+ L
Sbjct: 31 VSYAAVEKGELVVRIERDHLLHFLELLRDHPSYRFEQLMDLCGVDFPERPQRFDVVYNLL 90
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S +N R+RV + E VPS+ ++P A W+ERE +D++G+ F PD+RRILTD GF
Sbjct: 91 SVTHNHRIRVIVQTDEIMPVPSVHHLWPCATWWERECYDLFGVVFSNQPDMRRILTDNGF 150
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKD 199
EGHPLRKDFP+TG+ ++ YD + ++VV PV L Q+ RD+DF+SPWEG+ ++
Sbjct: 151 EGHPLRKDFPLTGYEQVRYDVERRQVVKEPVSLTQDFRDFDFVSPWEGM-LTLPGDEKAH 209
Query: 200 DM 201
++
Sbjct: 210 EV 211
>gi|195998265|ref|XP_002109001.1| hypothetical protein TRIADDRAFT_52564 [Trichoplax adhaerens]
gi|190589777|gb|EDV29799.1| hypothetical protein TRIADDRAFT_52564 [Trichoplax adhaerens]
Length = 269
Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats.
Identities = 85/194 (43%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ D G Y+++ ++ ++G EL L V L+ FLR+ + F +++D+
Sbjct: 59 TRLTDYGRYLLDIIPKYLQGINLALGDELELLVYPEALIPTMIFLRNHTNAQFESLVDIT 118
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
+D R RF+++Y+ LS +YN R+RVK E + SI I+PGA+WFEREVWDMYG
Sbjct: 119 AIDVPKREYRFELIYNLLSLRYNSRVRVKTYTDELTPIESITPIFPGANWFEREVWDMYG 178
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGF+GHP RKDFP++G+ EL YDD++K++V PVE QE R +D
Sbjct: 179 VYFANHPDLRRILTDYGFDGHPQRKDFPLSGYTELRYDDELKRIVSEPVEFAQEFRKFDL 238
Query: 182 LSPWEGVNSLFAKE 195
+PWE + +
Sbjct: 239 ETPWEQFPAYREEN 252
>gi|296419098|ref|XP_002839156.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635162|emb|CAZ83347.1| unnamed protein product [Tuber melanosporum]
Length = 277
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 80/199 (40%), Positives = 122/199 (61%), Gaps = 15/199 (7%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G Y++++ ++ EL++ + ++ + + D+
Sbjct: 76 SESLHAYGRYLISALPKYIQQFSIWKDELTIYIAPSAILP------------YTQVSDIT 123
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ +R NRF+VVY+ LS ++N R+RVK E VPSI G+Y GA+W+EREV+D++G
Sbjct: 124 AVDYPTRINRFEVVYNLLSIRHNSRIRVKTYADEASPVPSITGLYDGANWYEREVYDLFG 183
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ F GHPDLRRI+TDYGF+GHPLRKDFP+TG+ EL YD++ K++V P+E+ Q R++
Sbjct: 184 VLFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKRIVVEPLEMTQAFRNFQG 243
Query: 182 LSP-WEGVNSLFAKEDSKD 199
S WE V S K+D D
Sbjct: 244 GSSVWEQVGS--GKDDKPD 260
>gi|148259934|ref|YP_001234061.1| NADH (or F420H2) dehydrogenase, subunit C [Acidiphilium cryptum
JF-5]
gi|326403112|ref|YP_004283193.1| NADH-quinone oxidoreductase subunit C [Acidiphilium multivorum
AIU301]
gi|146401615|gb|ABQ30142.1| NADH dehydrogenase subunit C [Acidiphilium cryptum JF-5]
gi|325049973|dbj|BAJ80311.1| NADH-quinone oxidoreductase subunit C [Acidiphilium multivorum
AIU301]
Length = 213
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
GD + V V E + VD L ++ LRD+P F +D+CGVD+
Sbjct: 19 FGDLLRAI--DGVTDVVLERDERIIAVDRAALAAVMRTLRDNPQFAFEQCMDVCGVDWPE 76
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
R+ RFDVVY+ LS N RLRV + E VPS+ I+PG W+EREV+D++G+ F+G
Sbjct: 77 RAERFDVVYNLLSVTRNDRLRVIVTTDETAPVPSVSDIWPGVTWWEREVFDLFGVSFDGL 136
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D RRILTD GFEGHP+RKDFP+TG VEL YD++ K+VVY V L QE R++DFLSPWE
Sbjct: 137 VDHRRILTDNGFEGHPMRKDFPLTGHVELRYDEEQKRVVYDKVALTQEFRNFDFLSPWEA 196
Query: 188 VNSLFAKEDSK 198
+ ++
Sbjct: 197 MT-TLPGDEKA 206
>gi|197105266|ref|YP_002130643.1| NADH dehydrogenase I, C subunit [Phenylobacterium zucineum HLK1]
gi|218534305|sp|B4RCM7|NUOC_PHEZH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|196478686|gb|ACG78214.1| NADH dehydrogenase I, C subunit [Phenylobacterium zucineum HLK1]
Length = 209
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 103/203 (50%), Positives = 136/203 (66%), Gaps = 7/203 (3%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++E LG +V G + GELSL +V + LRDD F ++D+CG
Sbjct: 8 DELEALGRELVAGGLGPFGGYEVAFGELSLTGPAHRIVEGLTLLRDDH--GFQQLVDICG 65
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R RFDVVYH LS NRR+RVK+ E +VPS+ G+YP ADW+ERE +DMYG+
Sbjct: 66 VDYPERERRFDVVYHLLSFTKNRRIRVKVQADEDTAVPSVTGVYPNADWYEREAFDMYGV 125
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF+GHPDLRRILTDYGF GHPLRKDFP+TG+VE+ YDD++K+VVY PV+ E R++DFL
Sbjct: 126 FFDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRYDDELKRVVYEPVK-SVEWRNWDFL 184
Query: 183 SPWEGVNS----LFAKEDSKDDM 201
SPWEGV + ++ ++
Sbjct: 185 SPWEGVERGFAPILPGDEKGEEA 207
>gi|6624942|emb|CAB63881.1| hypothetical protein [Homo sapiens]
Length = 190
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 85/174 (48%), Positives = 118/174 (67%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY 83
V+ EL + + ++ + +FLRD + F +++DL VD +R NRF++VY+ LS ++
Sbjct: 4 VSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRF 63
Query: 84 NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
N R+RVK E + S V ++ A+W+ERE+WDM+G+FF HPDLRRILTDYGFEGHP
Sbjct: 64 NSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHP 123
Query: 144 LRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDS 197
RKDFP++G+VEL YDD+VK+VV PVEL QE R +D SPWE +S
Sbjct: 124 FRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPES 177
>gi|229315931|ref|YP_002860157.1| NADH dehydrogenase subunit 9 [Micromonas sp. RCC299]
gi|226431216|gb|ACO55621.1| NADH dehydrogenase subunit 9 [Micromonas sp. RCC299]
Length = 188
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 114/181 (62%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + + E+ V L+ +FL++ + F +ID+ VD+
Sbjct: 3 QSFVHVLTSMVPKWLEEIQVIRDEIICIVPSWALLPFLTFLKNHTNTQFKMLIDITAVDY 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
SRS+RF+VVY LS YN R+RVK V E + S+ ++P A+WFERE WDM+GI F
Sbjct: 63 PSRSSRFEVVYQLLSIHYNARIRVKTNVDELTPIESVSSLFPSANWFERETWDMFGICFL 122
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGFEGHPLRKDFPV+G+VE YDD K+V+ PVEL QE R +DF SPW
Sbjct: 123 NHPDLRRILTDYGFEGHPLRKDFPVSGYVEFRYDDSKKRVISEPVELAQEFRYFDFASPW 182
Query: 186 E 186
E
Sbjct: 183 E 183
>gi|113170491|ref|YP_717282.1| nad9 [Ostreococcus tauri]
gi|112806898|emb|CAL36404.1| unnamed protein product [Ostreococcus tauri]
Length = 186
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 88/172 (51%), Positives = 114/172 (66%), Gaps = 1/172 (0%)
Query: 16 FSGSVRFAVNSVGELSLDVD-CGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
F V+ + E++L + DL + L++ F +ID+ VD+ SR RF+V
Sbjct: 9 FPKWVQKVIAQSNEVTLVLKSPQDLHPVLEILKNHSATQFKMLIDITAVDYPSREARFEV 68
Query: 75 VYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
VYH LS + N RLR+K+ +E V S+ +YP A+WFERE WDM+GI F HPDLRRIL
Sbjct: 69 VYHLLSVQRNTRLRLKVQCSEHAIVESVTSLYPAANWFERETWDMFGICFTNHPDLRRIL 128
Query: 135 TDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
TDYGFEGHPLRKDFP+TG+VE YDD K+VV PVEL Q+ R ++F SPWE
Sbjct: 129 TDYGFEGHPLRKDFPLTGYVEFKYDDTKKRVVAEPVELAQQFRQFEFRSPWE 180
>gi|302657857|ref|XP_003020640.1| hypothetical protein TRV_05262 [Trichophyton verrucosum HKI 0517]
gi|291184495|gb|EFE40022.1| hypothetical protein TRV_05262 [Trichophyton verrucosum HKI 0517]
Length = 207
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 83/181 (45%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
EL++ V +V + +FLRD + + D+ VDF +R RF+VVY+ LS +
Sbjct: 1 FSVWKDELTIYVPPAGVVPVMTFLRDHTAAEYTQVSDITAVDFPTREYRFEVVYNLLSVR 60
Query: 83 YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+N R+RVK E VPSI +Y GA WFEREV+DM+G+FF GHPDLRRI+TDYGF+GH
Sbjct: 61 HNSRIRVKTYADEATPVPSITSLYDGALWFEREVYDMFGVFFTGHPDLRRIMTDYGFDGH 120
Query: 143 PLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD-FLSPWEGVNSLFAKEDSKDDM 201
PLRKDFP++G+ E+ YD++ K++V P+EL Q R+++ S WEG+ + D++
Sbjct: 121 PLRKDFPLSGYTEIRYDEEKKRIVVEPLELTQAFRNFEGGSSAWEGIGQGI--DRKPDNV 178
Query: 202 S 202
S
Sbjct: 179 S 179
>gi|170574739|ref|XP_001892941.1| NADH-ubiquinone oxidoreductase 30 kDa subunit, mitochondrial
precursor [Brugia malayi]
gi|158601253|gb|EDP38212.1| NADH-ubiquinone oxidoreductase 30 kDa subunit, mitochondrial
precursor, putative [Brugia malayi]
Length = 267
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ G Y V+ + G EL L + + + +FL+ + F NI+ +
Sbjct: 52 EKLAKFGRYCAECLPKFVQKVQFAAGDELELLIHPSGVTPVIAFLKGNHAAQFTNIVFIT 111
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D SR RF+V+Y FLS ++N R+RV+ E + SI I+ GA+W+EREV+DMYG
Sbjct: 112 GMDVPSRKFRFEVIYAFLSIRFNARIRVRTYTDEIAPLESITPIFKGANWYEREVYDMYG 171
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
++F HPDLRRILTDYGFEGHP RKDFP++G+VEL YD ++ + VY P EL QE R +D
Sbjct: 172 VWFNNHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDSELBRCVYEPTELAQEFRKFDL 231
Query: 182 LSPWEGVNSLFAK 194
+PWE + + +
Sbjct: 232 KTPWELMPNFRNE 244
>gi|154315521|ref|XP_001557083.1| hypothetical protein BC1G_04333 [Botryotinia fuckeliana B05.10]
gi|150847273|gb|EDN22466.1| hypothetical protein BC1G_04333 [Botryotinia fuckeliana B05.10]
Length = 274
Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL + + ++ + SFL+ + F I D+
Sbjct: 78 ADDMHRYGSWLMGCLPKYIQQFSVWKDELVIYISPSGVIPVFSFLKYNTSAEFTQISDIT 137
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF++VY+ LS ++N R+R+K E VPS+ +Y GA+W+EREV+D++G
Sbjct: 138 AVDFPTRDQRFEIVYNLLSVRHNSRIRIKTYADEASPVPSLCSLYDGANWYEREVYDLFG 197
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ +D++ K++V P+ + Q R+
Sbjct: 198 VFFVGHPDLRRIMTDYGFDGHPLRKDFPLTGYTEIRFDEEKKRIVVEPLGVTQAFRNLRG 257
Query: 182 LS-PWEGVNSLFAKEDS 197
+ WE +L
Sbjct: 258 GTAAWETWQNLAPALPK 274
>gi|209916088|gb|ACI95883.1| NADH dehydrogenase subunit 9 [Isoetes engelmannii]
gi|217331584|gb|ACK38310.1| NADH dehydrogenase subunit 9 [Isoetes engelmannii]
gi|241912114|gb|ACS71777.1| NADH dehydrogenase subunit 9 [Isoetes engelmannii]
gi|314908356|gb|ADT62125.1| NADH dehydrogenase subunit 9 [Isoetes engelmannii]
Length = 185
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 114/175 (65%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
+ + S E L + L L FL+ + F +ID+CGVD+ SR RF+V
Sbjct: 11 AIPKWINQCQTSKRENLLYTNPDYLFQLLWFLKYHTNTRFQVLIDICGVDYPSRKERFEV 70
Query: 75 VYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
VY+ LS N R+R+ + E + S+V I+P A W+EREVWDM+G+FF HPDLRRIL
Sbjct: 71 VYNLLSVDCNTRVRISTSYDEITPICSVVSIFPSAGWWEREVWDMFGVFFSNHPDLRRIL 130
Query: 135 TDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVN 189
TDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +D SPWE ++
Sbjct: 131 TDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVVSEPIEMTQEFRYFDLASPWEQMS 185
>gi|150406474|ref|YP_001315138.1| NADH dehydrogenase subunit 9 [Chlorokybus atmophyticus]
gi|126507711|gb|ABO15108.1| NADH dehydrogenase subunit 9 [Chlorokybus atmophyticus]
Length = 227
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 125/190 (65%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E+ ++ + + ++ E+ + D +V FLRD ++D+CGVD+
Sbjct: 36 ENFLKSLIATVPKWIERSMVIKNEMIIYTDPEYIVPFLFFLRDHMGTQVKILLDICGVDY 95
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
SR +RF+VVY+ L+ +YN R+R+K V E V S+V ++ A W+EREVWD++GIFF
Sbjct: 96 PSRKDRFEVVYNLLTIQYNSRIRIKTCVDEITPVSSVVSVFNSAAWWEREVWDLFGIFFS 155
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV +E+ QE R +DF SPW
Sbjct: 156 NHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDAEKRVVSESIEMAQEFRYFDFSSPW 215
Query: 186 EGVNSLFAKE 195
E ++ + ++
Sbjct: 216 EDIDKMKTEK 225
>gi|110816055|ref|YP_684387.1| NADH dehydrogenase subunit 9 [Oltmannsiellopsis viridis]
gi|86450266|gb|ABC96345.1| NADH dehydrogenase subunit 9 [Oltmannsiellopsis viridis]
Length = 188
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 84/184 (45%), Positives = 118/184 (64%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ L YI+ + ++F V+ + L LV+LC FL+ + + + ++D+C
Sbjct: 1 MEVKNRLASYILKTVPNLIKFCVSRRDSVVLYTTPDKLVALCKFLKYNVNTQYKVLVDVC 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ SR RF++VY+FLS YN R+ VK V E +PS+ + A W+EREVWD+ G
Sbjct: 61 GVDYPSRELRFEIVYNFLSVSYNSRICVKTCVDETTPIPSVTPTFSAAGWYEREVWDLLG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+F GHPDLRRILTDYGFEGHPLRKDFP+TG+ E+ YD K+V+ P +L Q R ++F
Sbjct: 121 VFISGHPDLRRILTDYGFEGHPLRKDFPLTGYSEVRYDHNEKRVIKEPTQLSQNFRYFNF 180
Query: 182 LSPW 185
SPW
Sbjct: 181 NSPW 184
>gi|262277299|ref|ZP_06055092.1| NADH-quinone oxidoreductase subunit c (nadhdehydrogenase i subunit
c) (ndh-1 subunit c) [alpha proteobacterium HIMB114]
gi|262224402|gb|EEY74861.1| NADH-quinone oxidoreductase subunit c (nadhdehydrogenase i subunit
c) (ndh-1 subunit c) [alpha proteobacterium HIMB114]
Length = 199
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 120/199 (60%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++++ I S + L + L+ L+ F ++D+
Sbjct: 1 MKSLDEMKTIIEGSPNFRFAKIEFQNDNLVCHCNADQLIDNVVQLKRHSDLKFRQLVDIL 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ +R RF+++Y FLS + N R+ +KI + + + + ++ ++P A+W EREV+DM G
Sbjct: 61 AVDYPNREKRFEIIYLFLSHENNLRISIKIDLEDQQKIQTLTNVFPSANWLEREVFDMNG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F HPDLRRILTDY FEG PLRKDFP+TG+ E+ YD + KKVVY PV+L Q +RD+DF
Sbjct: 121 IEFSDHPDLRRILTDYNFEGFPLRKDFPLTGYKEVRYDPETKKVVYGPVKLQQAYRDFDF 180
Query: 182 LSPWEGVNSLFAKEDSKDD 200
SPW+G + + +++ +
Sbjct: 181 KSPWQGPDYIKKQQEKSGE 199
>gi|332375566|gb|AEE62924.1| unknown [Dendroctonus ponderosae]
Length = 253
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 114/183 (62%), Gaps = 1/183 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+++ G Y+ V+ + EL + V L+ FL+D + ++++C +
Sbjct: 48 LKEFGAYVNECLPKFVQKVQFNHCKELEIMVAPDGLLPTMQFLKDHHNSQMECLMEVCAI 107
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D R RF+++Y+ LS +Y R+RVK E + S+ GIY ADW EREVWD++G+F
Sbjct: 108 DVPGRVFRFELIYNLLSLRYKSRIRVKTYTDEVTPIDSVTGIYKSADWPEREVWDLHGVF 167
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGF+GHPLRKDFP++G+ E YDD+ K+VV PVE QE R +D S
Sbjct: 168 FANHPDLRRILTDYGFDGHPLRKDFPLSGYYESRYDDEKKRVVLEPVEFAQEFRQFDLSS 227
Query: 184 PWE 186
PWE
Sbjct: 228 PWE 230
>gi|156372565|ref|XP_001629107.1| predicted protein [Nematostella vectensis]
gi|156216100|gb|EDO37044.1| predicted protein [Nematostella vectensis]
Length = 193
Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ + G+Y+ N V+ A + EL + + G +V + +FLRD + F ++ DL +
Sbjct: 1 LSEFGEYVANILPKYVQQAQVNHCKELEILIAPGGIVPVLTFLRDHTNAEFKSMADLTAI 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
D SR RF+++Y+ LS YN R+RVK E ++ + ++ A+W+EREVWDMYG+F
Sbjct: 61 DVPSRPYRFEIIYNLLSLTYNSRIRVKTYTDELTAIDTASEVHRIANWYEREVWDMYGVF 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHP RKDFPV G+VE+ YDD++K++V P+E+ QE+R +D
Sbjct: 121 FSNHPDLRRILTDYGFEGHPFRKDFPVQGYVEVRYDDELKRLVCEPIEMAQEYRKFDISP 180
Query: 184 PWEGVNSLFAKED 196
WE + ++
Sbjct: 181 TWEQFPTFRKDKE 193
>gi|323398658|ref|YP_004222733.1| NADH dehydrogenase subunit 9 [Glaucocystis nostochinearum]
gi|321401351|gb|ADW83105.1| NADH dehydrogenase subunit 9 [Glaucocystis nostochinearum]
Length = 196
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Query: 1 MVRK-----IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M +E+ G + + ++ EL + + L L FL++ H +
Sbjct: 1 MNENINIITLENYGKSLFSIMPKFIQNVEIIYNELIITTNSKYLFQLVYFLKNYSHAQYK 60
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
+ D+ GVDFL RF V Y FLS +N R+RVK V+E +++ SIV ++P A+W+ERE
Sbjct: 61 LLSDIAGVDFLENKKRFLVSYQFLSILFNTRIRVKAYVSEFEAIESIVPLHPSANWYERE 120
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
VWD+YG+FF HPDLRRILTDYGFEGHPLRKDFP++G+ E+ YDD +K+VV P+E+ QE
Sbjct: 121 VWDLYGVFFINHPDLRRILTDYGFEGHPLRKDFPLSGYTEVRYDDSLKQVVCEPLEITQE 180
Query: 176 HRDYDFLSPWE 186
R++DF S W+
Sbjct: 181 FRNFDFWSYWD 191
>gi|11497471|ref|NP_042261.1| NADH dehydrogenase (ubiquinone), subunit 9 [Prototheca wickerhamii]
gi|6647673|sp|Q37622|NDUS3_PROWI RecName: Full=NADH-ubiquinone oxidoreductase subunit 9
gi|467862|gb|AAD12649.1| NADH dehydrogenase (ubiquinone), subunit 9 [Prototheca wickerhamii]
Length = 192
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 83/184 (45%), Positives = 115/184 (62%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ I+ +++ V+ E + V L FLRD + ID+ D+
Sbjct: 3 NNFEKSILLMVPQWIQYHVSHRNETTFYVYPEYLKPFLYFLRDHMSTQYKVCIDITAADY 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
SR++RF+ VY+ LS +YN R+R+K V E ++ S+ +Y A W+EREVWDM+G+FF
Sbjct: 63 PSRASRFECVYNLLSVEYNSRIRIKTCVDEITTLESVTPVYSSAAWWEREVWDMFGVFFH 122
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGF+GHPLRKDFP++G+VE+ YDD K+V VE QE R +DF SPW
Sbjct: 123 NHPDLRRILTDYGFQGHPLRKDFPLSGYVEVRYDDSEKRVCIESVEYSQEFRYFDFESPW 182
Query: 186 EGVN 189
E V+
Sbjct: 183 EQVD 186
>gi|321268765|gb|ADW79214.1| NADH dehydrogenase subunit 9 [Cyanophora paradoxa]
Length = 198
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 120/186 (64%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ I ++ EL L V+ +L S FL+ + + + D+ V
Sbjct: 13 SLKHFSQLITKIIPRLIKDVFIINNELILIVENNNLNSTLFFLKYHTYTQYKVLCDITAV 72
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DFL R RF+VVY FLS Y RLR+K+ + E + + SI +YP A+W+ERE+WD++GIF
Sbjct: 73 DFLDRIERFEVVYQFLSVSYASRLRIKVNLKETELINSISTLYPCANWYEREIWDLFGIF 132
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHPL+KDFP++G++E+ YDD VK+V+ PV++ QE R+++F S
Sbjct: 133 FMNHPDLRRILTDYGFEGHPLKKDFPLSGYLEVRYDDIVKQVICEPVDITQEFRNFNFSS 192
Query: 184 PWEGVN 189
PWE
Sbjct: 193 PWEITQ 198
>gi|312796900|ref|YP_004029822.1| NADH-quinone oxidoreductase chain C [Burkholderia rhizoxinica HKI
454]
gi|312168675|emb|CBW75678.1| NADH-quinone oxidoreductase chain C (EC 1.6.5.3) [Burkholderia
rhizoxinica HKI 454]
Length = 200
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + + ++ A S+G+L++ V DL+ + + LRDDP F + DL
Sbjct: 1 MANKLETLKANLDKALGNKLKSATESLGQLTIVVAASDLIDVATRLRDDPTLGFKQLTDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLRV++ + PS++ ++ +W+
Sbjct: 61 CGVDYSTYGDGAYDGPRFAAVSHLLSIRNNWRLRVRVFAPDDDVPILPSLIDVWNSVNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G+VE+ YD K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGYVEMRYDAAEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + +E
Sbjct: 181 E----------PREITPRVIREE 193
>gi|327195244|ref|YP_004339026.1| NADH dehydrogenase subunit 9 [Coccomyxa sp. C-169]
gi|325070740|gb|ADY75468.1| NADH dehydrogenase subunit 9 [Coccomyxa sp. C-169]
Length = 189
Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 116/181 (64%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + ++ V+ +S E L V LVS FLRD + +ID+ +D
Sbjct: 3 QRFTNSLIKIVPKWVQHLQSSQEEAVLFVYPQHLVSFLLFLRDYTNTQCKQLIDITAIDN 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
SRS+RF VVY LS +YN R+RVK + E + S G++ A W+EREVWDM+GIFF
Sbjct: 63 PSRSSRFQVVYQLLSVQYNARIRVKSCIDEVTPISSATGVFSCAAWWEREVWDMFGIFFY 122
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGF+GHPLRKDFP+TG+VE+ YDD K+V+ VE+ QE R +DF +PW
Sbjct: 123 DHPDLRRILTDYGFQGHPLRKDFPLTGYVEVRYDDSEKRVITEAVEISQEFRYFDFSTPW 182
Query: 186 E 186
E
Sbjct: 183 E 183
>gi|167585973|ref|ZP_02378361.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia ubonensis
Bu]
Length = 200
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V +VGEL+L V D + + + LRDDP F +IDL
Sbjct: 1 MASKIETLKANLEAALGARVVSLTEAVGELTLVVKASDYLEVATTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ + RF V H LS N RLRV++ + VPS+V I+ A+W+
Sbjct: 61 CGLDYQTYGDGAYDGPRFAAVSHLLSVTNNWRLRVRVFAPDDDLPIVPSVVDIWTSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|107023186|ref|YP_621513.1| NADH dehydrogenase subunit C [Burkholderia cenocepacia AU 1054]
gi|116690268|ref|YP_835891.1| NADH dehydrogenase subunit C [Burkholderia cenocepacia HI2424]
gi|170733607|ref|YP_001765554.1| NADH dehydrogenase subunit C [Burkholderia cenocepacia MC0-3]
gi|206560701|ref|YP_002231466.1| NADH dehydrogenase subunit C [Burkholderia cenocepacia J2315]
gi|254247659|ref|ZP_04940980.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia cenocepacia
PC184]
gi|123371444|sp|Q1BV15|NUOC_BURCA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534251|sp|B1JVN9|NUOC_BURCC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534253|sp|B4E5M0|NUOC_BURCJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534265|sp|A0K921|NUOC_BURCH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|105893375|gb|ABF76540.1| NADH dehydrogenase subunit C [Burkholderia cenocepacia AU 1054]
gi|116648357|gb|ABK08998.1| NADH dehydrogenase subunit C [Burkholderia cenocepacia HI2424]
gi|124872435|gb|EAY64151.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia cenocepacia
PC184]
gi|169816849|gb|ACA91432.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia cenocepacia
MC0-3]
gi|198036743|emb|CAR52643.1| NADH dehydrogenase I chain C [Burkholderia cenocepacia J2315]
Length = 200
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + LRDDP F +IDL
Sbjct: 1 MASKIETLKANLEAALGARVVSLTEAIGELTLVVKASDYLEVAKTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS N RLR++ + V S+V I+ A+W+
Sbjct: 61 CGVDYQTFGDGAYDGPRFAAVSHLLSVTNNWRLRLRAFAPDDDLPIVASLVDIWTSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|309781854|ref|ZP_07676587.1| NADH dehydrogenase (ubiquinone), C subunit [Ralstonia sp.
5_7_47FAA]
gi|308919495|gb|EFP65159.1| NADH dehydrogenase (ubiquinone), C subunit [Ralstonia sp.
5_7_47FAA]
Length = 200
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 110/204 (53%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + + V+ S+GEL+L V D + LRDD F +IDL
Sbjct: 1 MTEKLATLKAALEKALGDRVQSLTESIGELTLVVKAADYYDVMRTLRDDASLKFEQLIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + V H LS +N R+RV++ + S+ I+ ADW+
Sbjct: 61 CGVDYADYGDGAWNGPRFAAVSHLLSITHNWRVRVRVFAPDDDLPVVASVTTIWNSADWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|300703644|ref|YP_003745246.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum
CFBP2957]
gi|299071307|emb|CBJ42625.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum
CFBP2957]
Length = 200
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 112/204 (54%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + + ++ +VGEL+L V D + LRDD F +IDL
Sbjct: 1 MTDKLATLKAALEKALGDRIQSLTEAVGELTLVVKAADYLDAMRTLRDDAALKFEQLIDL 60
Query: 61 CGVDFL------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ RF V H LS +N RLRV++ + S+V ++ ADWF
Sbjct: 61 CGVDYSAYGDGAWNGPRFAAVSHLLSITHNWRLRVRVFAPDDDLPVVASVVDVWNAADWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++V+Y+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|148284881|ref|YP_001248971.1| NADH dehydrogenase I chain C [Orientia tsutsugamushi str. Boryong]
gi|146740320|emb|CAM80724.1| NADH dehydrogenase I chain C [Orientia tsutsugamushi str. Boryong]
Length = 195
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+++L + + + F+ S+ N + ++ L+ + L++D F + D+
Sbjct: 6 LKELKELVESQFAISSISAKFNITNHVEAIINKEQLIEVLKLLKNDKELKFTILTDVFAA 65
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF R+ RF++VY+ LS N RL VKI + + + + S ++ A+W+ERE++D++GI
Sbjct: 66 DFPDRNKRFEIVYNLLSIIKNIRLIVKINLNDNELIQSATPVFSNANWYEREIYDLFGIK 125
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HP L+RILTDYGF GHPLRKDF ++G+ ++ YDDK++KVVY PV+L QE+R+++F S
Sbjct: 126 FANHPHLKRILTDYGFVGHPLRKDFALSGYSQVKYDDKLEKVVYEPVKLDQEYRNFNFSS 185
Query: 184 PWEGVN 189
PW+G
Sbjct: 186 PWQGPK 191
>gi|161524206|ref|YP_001579218.1| NADH dehydrogenase subunit C [Burkholderia multivorans ATCC 17616]
gi|189351037|ref|YP_001946665.1| NADH dehydrogenase subunit C [Burkholderia multivorans ATCC 17616]
gi|221199658|ref|ZP_03572702.1| NADH dehydrogenase I, C subunit [Burkholderia multivorans CGD2M]
gi|221205442|ref|ZP_03578457.1| NADH dehydrogenase I, C subunit [Burkholderia multivorans CGD2]
gi|221211737|ref|ZP_03584716.1| NADH dehydrogenase I, C subunit [Burkholderia multivorans CGD1]
gi|218534254|sp|A9AFY9|NUOC_BURM1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|160341635|gb|ABX14721.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia multivorans
ATCC 17616]
gi|189335059|dbj|BAG44129.1| NADH dehydrogenase I chain C [Burkholderia multivorans ATCC 17616]
gi|221169098|gb|EEE01566.1| NADH dehydrogenase I, C subunit [Burkholderia multivorans CGD1]
gi|221174280|gb|EEE06712.1| NADH dehydrogenase I, C subunit [Burkholderia multivorans CGD2]
gi|221180943|gb|EEE13346.1| NADH dehydrogenase I, C subunit [Burkholderia multivorans CGD2M]
Length = 200
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + + LRDDP F +IDL
Sbjct: 1 MASKIETLKANLEAALGARVVSLTEAIGELTLVVKASDYLDVATTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS N RLR+++ + VPS+V I+ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVTHLLSVTNNWRLRLRVFAPDDDLPIVPSLVDIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|325520399|gb|EGC99517.1| NADH dehydrogenase subunit C [Burkholderia sp. TJI49]
Length = 200
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 117/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + + LRDDP F +IDL
Sbjct: 1 MASKIETLKANLEAALGARVVSLTEAIGELTLVVKASDYLEVATTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS N RLR+++ + V S+V I+ A+W+
Sbjct: 61 CGVDYQTFGDGAYDGPRFAAVSHLLSVTNNWRLRLRVFAPDDDLPIVASLVDIWTSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|321268760|gb|ADW79209.1| NADH dehydrogenase subunit 9 [Cyanophora paradoxa]
Length = 198
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 120/186 (64%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ I ++ EL L V+ +L S FL+ + + + D+ V
Sbjct: 13 SLKHFSQLITKIIPRLIKDVFIINNELILIVENNNLNSTLFFLKYHTYTQYKVLCDITAV 72
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DFL R RF+VVY FLS Y RLR+K+ + E + + SI +YP A+W+ERE+WD++GIF
Sbjct: 73 DFLDRIERFEVVYQFLSVSYASRLRIKVNLKETELINSISMLYPCANWYEREIWDLFGIF 132
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGFEGHPL+KDFP++G++E+ YDD VK+V+ PV++ QE R+++F S
Sbjct: 133 FMNHPDLRRILTDYGFEGHPLKKDFPLSGYLEVRYDDIVKQVICEPVDITQEFRNFNFSS 192
Query: 184 PWEGVN 189
PWE
Sbjct: 193 PWEITQ 198
>gi|189183820|ref|YP_001937605.1| NADH dehydrogenase I chain C [Orientia tsutsugamushi str. Ikeda]
gi|189180591|dbj|BAG40371.1| NADH dehydrogenase I chain C [Orientia tsutsugamushi str. Ikeda]
Length = 196
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+++L + + + F+ S+ N + + L+ + L++D F + D+
Sbjct: 6 LKELKELVESQFAISSISAKFNITNHVEAIIHKEQLIEVLKLLKNDKELKFTILTDIFAA 65
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF R+ RF++VY+ LS N RL VKI + + + + S ++ A+W+ERE++D++GI
Sbjct: 66 DFPDRNKRFEIVYNLLSIIKNIRLIVKINLNDNELIQSATPVFSNANWYEREIYDLFGIK 125
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HP L+RILTDYGF GHPLRKDF ++G+ ++ YDDK++KVVY PV+L QE+R+++F S
Sbjct: 126 FANHPHLKRILTDYGFVGHPLRKDFALSGYSQVKYDDKLEKVVYEPVKLDQEYRNFNFSS 185
Query: 184 PWEGVNSLFAK 194
PW+G S
Sbjct: 186 PWQGPKSTIQD 196
>gi|241663482|ref|YP_002981842.1| NADH dehydrogenase subunit C [Ralstonia pickettii 12D]
gi|240865509|gb|ACS63170.1| NADH (or F420H2) dehydrogenase, subunit C [Ralstonia pickettii 12D]
Length = 200
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 110/204 (53%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + + V+ S+GEL+L V D + LRDD F +IDL
Sbjct: 1 MTEKLATLKAALEKALGDRVQSLTESIGELTLVVKAADYYDVMRTLRDDASLKFEQLIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + V H LS +N R+RV++ + S+ I+ ADW+
Sbjct: 61 CGVDYADYGDGAWNGPRFAGVSHLLSITHNWRVRVRVFAPDDDLPVVASVTTIWNSADWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|116202719|ref|XP_001227171.1| hypothetical protein CHGG_09244 [Chaetomium globosum CBS 148.51]
gi|88177762|gb|EAQ85230.1| hypothetical protein CHGG_09244 [Chaetomium globosum CBS 148.51]
Length = 284
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 112/189 (59%), Gaps = 7/189 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ EL++ + D+ F + +
Sbjct: 77 SDNMHKYGSWLMGCLPKYIQQFSVWKDELTIYIPPFRRYP------DNTAAEFTQMSTIT 130
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF +R RF++VY+ LS ++N R+RVK E VPS ++ GA+W+EREV+DM+G
Sbjct: 131 AVDFPTRDQRFEIVYNLLSVRHNSRIRVKTYADETTPVPSATPLFDGANWYEREVYDMFG 190
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF HPDLRRI+TDYGFEGHPLRKDFPVTG+ E+ +D++ K++V P+EL Q R+++
Sbjct: 191 VFFLNHPDLRRIMTDYGFEGHPLRKDFPVTGYTEIRWDEEKKRIVTEPLELTQAFRNFEG 250
Query: 181 FLSPWEGVN 189
S WE +
Sbjct: 251 GSSAWEQIG 259
>gi|300311097|ref|YP_003775189.1| NADH dehydrogenase I subunit C [Herbaspirillum seropedicae SmR1]
gi|300073882|gb|ADJ63281.1| NADH dehydrogenase I (Chain C) oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 198
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + N+ G ++ ++GE+++ V D +S LRD F +IDL
Sbjct: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + + VV H +S +N R+RV++ + V S+ I+ A W+
Sbjct: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D YGI F+GHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+V+Y+PV +
Sbjct: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 E----------PREITPRIIREEN 194
>gi|167562179|ref|ZP_02355095.1| NADH dehydrogenase subunit C [Burkholderia oklahomensis EO147]
gi|167569424|ref|ZP_02362298.1| NADH dehydrogenase subunit C [Burkholderia oklahomensis C6786]
Length = 200
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 90/203 (44%), Positives = 117/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V V +VGEL+L V GD + + LRDD F +IDL
Sbjct: 1 MASKIETLKANLEAALGARVVSLVEAVGELTLVVKAGDYLEVAKALRDDRTLGFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS N RLRV++ VPSIV ++ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVLHLLSIANNWRLRVRVFAPNDDLPIVPSIVDVWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|56684557|gb|AAW21977.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494311|gb|ABF29491.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494315|gb|ABF29494.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494319|gb|ABF29497.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494323|gb|ABF29500.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494327|gb|ABF29503.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494331|gb|ABF29506.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494335|gb|ABF29509.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494339|gb|ABF29512.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494343|gb|ABF29515.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494347|gb|ABF29518.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
gi|94494351|gb|ABF29521.1| NADH dehydrogenase subunit 9 [Plasmopara viticola]
Length = 186
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 79/184 (42%), Positives = 125/184 (67%), Gaps = 2/184 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ Y++N + EL +++ LV + F ++ + F + ++C
Sbjct: 1 MKILQKFSQYLLNVLP--IVNYTLYKNELCINISTNKLVPILLFFKNHTNSQFKILSEIC 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD++++ RF+++Y+ LS ++N RL+VKI + E + V SI+ +Y A+W ERE+WDM+G
Sbjct: 59 AVDYINKKKRFEIIYNLLSIRFNSRLKVKITLNELQPVNSIIKVYKSANWCEREIWDMFG 118
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFF HPDLRRILTDYGFEGHPLRKDFP++GF+E+ Y++ K+VVY PV L Q++R ++F
Sbjct: 119 IFFLNHPDLRRILTDYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPVNLAQQYRLFEF 178
Query: 182 LSPW 185
SPW
Sbjct: 179 NSPW 182
>gi|83746299|ref|ZP_00943352.1| NADH-quinone oxidoreductase chain C [Ralstonia solanacearum UW551]
gi|207723875|ref|YP_002254273.1| nadh dehydrogenaseI(chain c) protein [Ralstonia solanacearum MolK2]
gi|207742737|ref|YP_002259129.1| nadh dehydrogenaseI(chain c) protein [Ralstonia solanacearum
IPO1609]
gi|83727049|gb|EAP74174.1| NADH-quinone oxidoreductase chain C [Ralstonia solanacearum UW551]
gi|206589080|emb|CAQ36042.1| nadh dehydrogenaseI(chain c) protein [Ralstonia solanacearum MolK2]
gi|206594131|emb|CAQ61058.1| nadh dehydrogenaseI(chain c) protein [Ralstonia solanacearum
IPO1609]
Length = 200
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 112/204 (54%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + ++ +VGEL+L V D + + LRDD F +IDL
Sbjct: 1 MTDKLATLKAALEKVLGDRIQSLTEAVGELTLVVKAADYLDVMRTLRDDATLKFEQLIDL 60
Query: 61 CGVDFL------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ RF V H LS +N RLRV++ + S+V ++ ADWF
Sbjct: 61 CGVDYSAYGDGAWNGPRFAAVSHLLSVTHNWRLRVRVFAPDDDLPVVASVVDVWNAADWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++V+Y+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|318037333|ref|NP_001188173.1| mitochondrial NADH dehydrogenase (ubiquinone) iron-sulfur protein 3
[Ictalurus punctatus]
gi|308323727|gb|ADO28999.1| mitochondrial NADH dehydrogenase (ubiquinone) iron-sulfur protein 3
[Ictalurus punctatus]
Length = 176
Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/166 (50%), Positives = 114/166 (68%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
+ ++ + +FLRD + F N+ DL VD +R NRF++VY+ LS ++N R+RVK
Sbjct: 2 IHPEGVLPVLTFLRDHSNAQFRNMTDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYT 61
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
E V S V ++ A+W+EREVWDM+G+FF HPDLRRILTDYGFEGHP RKDFP++G+
Sbjct: 62 DELTPVDSAVPVHEAANWYEREVWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGY 121
Query: 154 VELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKD 199
VE+ YDD++K+VV PVEL QE R +D SPWE + +D+
Sbjct: 122 VEVRYDDELKRVVAEPVELAQEFRKFDLNSPWEAFPAYREPKDAPK 167
>gi|254251863|ref|ZP_04945181.1| NADH dehydrogenase I,D subunit [Burkholderia dolosa AUO158]
gi|124894472|gb|EAY68352.1| NADH dehydrogenase I,D subunit [Burkholderia dolosa AUO158]
Length = 200
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + LRDDP F +IDL
Sbjct: 1 MASKIETLKANLEAALGARVVSLTEAIGELTLVVKASDYLDVAKTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS N RLR+++ + V S+V ++ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVTHLLSITNNWRLRLRVFAPDDDLPIVASLVDVWSSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|78067044|ref|YP_369813.1| NADH dehydrogenase subunit C [Burkholderia sp. 383]
gi|123568006|sp|Q39EE7|NUOC_BURS3 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|77967789|gb|ABB09169.1| NADH dehydrogenase subunit C [Burkholderia sp. 383]
Length = 200
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + LRDDP F ++DL
Sbjct: 1 MASKIETLKANLEAALGARVVSLTEAIGELTLVVKASDYLEVAKMLRDDPKLRFEQLLDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS N RLR++ + V S+V I+ A+W+
Sbjct: 61 CGVDYQTFGDGAYDGPRFAAVSHLLSVTNNWRLRLRAFAPDDDLPIVASLVDIWTSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|170696397|ref|ZP_02887526.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia graminis
C4D1M]
gi|170138725|gb|EDT06924.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia graminis
C4D1M]
Length = 200
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G + ++GEL++ V D +++ + LRDD F ++DL
Sbjct: 1 MASKLETLKANLEAAFGGLLLSTTEAIGELTIVVKASDYLNVATRLRDDRSLGFEQMMDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ PS+V I+ A+W+
Sbjct: 61 CGVDYQTYADGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPNDDMPILPSVVDIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|238028141|ref|YP_002912372.1| NADH dehydrogenase subunit C [Burkholderia glumae BGR1]
gi|237877335|gb|ACR29668.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia glumae
BGR1]
Length = 200
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V +VGEL+L V D + + + LRDD F +IDL
Sbjct: 1 MASKIETLKANLEAALGERVVSLTEAVGELTLVVRARDYIEVATLLRDDRKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V LS N RLR+++ + + S+V I+ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVLQLLSITNNWRLRLRVFAPDDDLPIIASVVDIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|308072463|dbj|BAJ22093.1| NADH dehydrogenase subunit 9 [Cycas taitungensis]
Length = 197
Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 3/199 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ + Y+ ++ V S E L + L L FL+ + F +ID
Sbjct: 1 MDNQL--IFKYLRDTLPSKWVHKMERSEHENRLYTNTDYLFQLLWFLKSHTYTRFQVLID 58
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+CGVD+ SR RF+VVY+ LS +YN R+ V+ +V E + S+V ++P A W+EREVWDM
Sbjct: 59 ICGVDYPSRKRRFEVVYNLLSTRYNSRICVRTSVDEITRISSVVSLFPSAGWWEREVWDM 118
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+G++F HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV+ P+ + QE R +
Sbjct: 119 FGVYFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVVFEPIGMTQEFRYF 178
Query: 180 DFLSPWEGVNSLFAKEDSK 198
DF SPWE + ++ +
Sbjct: 179 DFASPWEQMARSDGSDNEE 197
>gi|134296431|ref|YP_001120166.1| NADH dehydrogenase subunit C [Burkholderia vietnamiensis G4]
gi|218534284|sp|A4JGC8|NUOC_BURVG RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|134139588|gb|ABO55331.1| NADH dehydrogenase subunit C [Burkholderia vietnamiensis G4]
Length = 200
Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + LRDDP F +IDL
Sbjct: 1 MASKIETLKANLEAALGARVVSLTEAIGELTLVVKASDYLEVAKTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ + RF V LS N RLR+++ + VPS+V + ++W+
Sbjct: 61 CGIDYQTYGDGAYDGPRFAAVSQLLSVTNNWRLRLRVFAPDDDLPIVPSLVDTWSSSNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRR+LTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRLLTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|157827451|ref|YP_001496515.1| NADH dehydrogenase subunit C [Rickettsia bellii OSU 85-389]
gi|157802755|gb|ABV79478.1| NADH dehydrogenase subunit C [Rickettsia bellii OSU 85-389]
Length = 196
Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 117/196 (59%), Gaps = 1/196 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+E + + + S + L+ V+ L+ L++ F + DL G
Sbjct: 2 TLEKIIEKLAAKSSILISPITVKEN-LAYKVEPNFLLPFLKALKESEELRFTVLTDLFGS 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF ++ RF+VVY+ LS K N+RL +K V+E +S+PS + I+ A W+EREV+DM+GI
Sbjct: 61 DFPEKAKRFEVVYNLLSLKLNKRLIIKTYVSEHESIPSAMSIFNAACWYEREVYDMFGIN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F+G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD++ KKV Y PV L E+R++DF S
Sbjct: 121 FDGNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDEQTKKVAYEPVNLDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSKD 199
PW ++
Sbjct: 181 PWHSPTYTLPGDEKAK 196
>gi|209518513|ref|ZP_03267334.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp. H160]
gi|209501058|gb|EEA01093.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp. H160]
Length = 200
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 117/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G + +VGEL++ V D +++ LRDD F +DL
Sbjct: 1 MASKLETLKANLEAAFGGLLLSTTEAVGELTIVVKASDYLNVAKRLRDDRTLGFEQCVDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ + PS+V I+ +W+
Sbjct: 61 CGVDYQTYADGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPDDDMPILPSVVEIWNSVNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|91205211|ref|YP_537566.1| NADH dehydrogenase subunit C [Rickettsia bellii RML369-C]
gi|122425873|sp|Q1RJI7|NUOC_RICBR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|91068755|gb|ABE04477.1| NADH dehydrogenase I chain C [Rickettsia bellii RML369-C]
Length = 196
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 116/196 (59%), Gaps = 1/196 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+E + + + S + L+ V+ L+ L++ F + DL G
Sbjct: 2 TLEKIIEKLAAKSSILISPITVKEN-LAYKVEPNFLLPFLKALKESEELRFTVLTDLFGS 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF ++ RF+VVY+ LS K N+RL +K V+E +S+PS + I+ W+EREV+DM+GI
Sbjct: 61 DFPEKAKRFEVVYNLLSLKLNKRLIIKTYVSEHESIPSAMSIFNATCWYEREVYDMFGIN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F+G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD++ KKV Y PV L E+R++DF S
Sbjct: 121 FDGNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDEQTKKVAYEPVNLDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSKD 199
PW ++
Sbjct: 181 PWHSPTYTLPGDEKAK 196
>gi|295676039|ref|YP_003604563.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp.
CCGE1002]
gi|295435882|gb|ADG15052.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp.
CCGE1002]
Length = 200
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G + SVGEL++ V GD +++ LRDD F +DL
Sbjct: 1 MASKLETLKANLEAAFGGLLVSVTESVGELTIVVKAGDYLNVAKRLRDDRSLGFEQCVDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ + PS+V I+ +W+
Sbjct: 61 CGVDYQTYAEGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPDDDMPILPSVVDIWNSVNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|299066335|emb|CBJ37519.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum
CMR15]
Length = 200
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + + ++ +VGEL+L V D + LRDD F +IDL
Sbjct: 1 MTDKLATLQSALEKALGNRIQSLTEAVGELTLVVKAADYLETMRTLRDDAALKFEQLIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + + V H LS +N R+RV++ + S+V I+ ADWF
Sbjct: 61 CGVDYSTYGDGAWNGPRFAAVSHLLSVTHNWRVRVRVFAPDDDLPVVASVVDIWNAADWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++V+Y+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|186476762|ref|YP_001858232.1| NADH dehydrogenase subunit C [Burkholderia phymatum STM815]
gi|218534257|sp|B2JDM6|NUOC_BURP8 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|184193221|gb|ACC71186.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia phymatum
STM815]
Length = 200
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G + S+GEL++ V D + + + LRDD F +IDL
Sbjct: 1 MASKLETLKANLEAAFGGRLTSITESIGELTIVVKADDFLEVATRLRDDAKLHFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CG+D+ + RF V H LS N RLRV++ + PS+V I+ A+W+
Sbjct: 61 CGIDYQTYGEGAYDGPRFAAVLHLLSITNNWRLRVRVFAPDDDVPLIPSVVEIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|187929291|ref|YP_001899778.1| NADH dehydrogenase subunit C [Ralstonia pickettii 12J]
gi|218534309|sp|B2U7Q9|NUOC_RALPJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|187726181|gb|ACD27346.1| NADH (or F420H2) dehydrogenase, subunit C [Ralstonia pickettii 12J]
Length = 200
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + + V+ SVGEL+L V D + LRDD F ++DL
Sbjct: 1 MTDKLATLKAALEKALGNRVQSLTESVGELTLVVKAADYLDAMRTLRDDASLKFEQLMDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + V H LS +N R+RV++ + S+ I+ ADWF
Sbjct: 61 CGVDYADYGDGAWNGPRFAAVSHLLSITHNWRVRVRVFAPDDDLPVVSSVTTIWNSADWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|330813984|ref|YP_004358223.1| NADH-ubiquinone oxidoreductase chain C [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487079|gb|AEA81484.1| NADH-ubiquinone oxidoreductase chain C [Candidatus Pelagibacter sp.
IMCC9063]
Length = 202
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 119/175 (68%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR 86
L L+ D +++ L+ P F +ID+ GVD+ +S RF+V+Y FLS + N R
Sbjct: 27 HDNLILNCDVDNIIHNIDILKRSPEFKFRQLIDILGVDYPQQSKRFEVIYLFLSHENNFR 86
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ +KI + + + VP++ I+P A+W EREV+DMYGI F HPDLRRILTDY FEG+PLRK
Sbjct: 87 ISLKIKIGDEEIVPTLTDIFPSANWQEREVFDMYGIRFADHPDLRRILTDYEFEGYPLRK 146
Query: 147 DFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDM 201
DFP+TG+ E+ Y + +KV+Y PV+L Q++RD++F SPWEG + ++D ++
Sbjct: 147 DFPLTGYKEVRYSAEHQKVIYEPVKLAQDYRDFNFESPWEGSEYIKKEQDKVEEK 201
>gi|323525438|ref|YP_004227591.1| NADH (or F420H2) dehydrogenase subunit C [Burkholderia sp.
CCGE1001]
gi|323382440|gb|ADX54531.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp.
CCGE1001]
Length = 200
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G + ++GEL++ V D +++ + LRDD F ++DL
Sbjct: 1 MASKLETLKANLEAAFGGLLLSTTEAIGELTIVVKASDYLNVATRLRDDRSLGFDQMMDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ + PS+V ++ A+W+
Sbjct: 61 CGVDYQTYADGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPDDDMPILPSVVEVWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|83719353|ref|YP_441616.1| NADH dehydrogenase subunit C [Burkholderia thailandensis E264]
gi|167618533|ref|ZP_02387164.1| NADH dehydrogenase subunit C [Burkholderia thailandensis Bt4]
gi|257139688|ref|ZP_05587950.1| NADH dehydrogenase subunit C [Burkholderia thailandensis E264]
gi|123537637|sp|Q2SZN3|NUOC_BURTA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|83653178|gb|ABC37241.1| NADH dehydrogenase I, C subunit [Burkholderia thailandensis E264]
Length = 200
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V +VGEL+L V D + + LRDD F +IDL
Sbjct: 1 MASKIETLKANLEAALGARAVSLVEAVGELTLVVKASDYLEVAKQLRDDRSLGFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ + RF V H LS N RLRV++ + VPS+V I+ A+W+
Sbjct: 61 CGIDYQTYGDGAYDGPRFAAVLHLLSVANNWRLRVRVFAPDDDLPIVPSVVDIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|167580424|ref|ZP_02373298.1| NADH dehydrogenase subunit C [Burkholderia thailandensis TXDOH]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V +VGEL+L V D + + LRDD F +IDL
Sbjct: 1 MASKIETLKANLEAALGARAVSLVEAVGELTLVVKASDYLEVAKQLRDDRSLGFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ + RF V H LS N RLR+++ + VPS+V I+ A+W+
Sbjct: 61 CGIDYQTYGDGAYDGPRFAAVLHLLSVANNWRLRLRVFAPDDDLPIVPSVVDIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|91782614|ref|YP_557820.1| NADH dehydrogenase subunit C [Burkholderia xenovorans LB400]
gi|122970576|sp|Q142H1|NUOC_BURXL RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|91686568|gb|ABE29768.1| NADH dehydrogenase subunit C [Burkholderia xenovorans LB400]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G ++ ++GEL++ V GD +++ + LRDD F +DL
Sbjct: 1 MASKLETLKANLEAAFGGLLQSTTEAIGELTIVVKAGDYLNVATRLRDDRSLGFEQCVDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ + +PS+V I+ +W+
Sbjct: 61 CGVDYQTYADGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPDDEVPILPSVVEIWNSVNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|171316305|ref|ZP_02905526.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia ambifaria
MEX-5]
gi|171098531|gb|EDT43332.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia ambifaria
MEX-5]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + LRDDP F +IDL
Sbjct: 1 MASKIEILKANLEAALGARVVSLTEAIGELTLVVKASDYLEVAKTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V LS N RLR+++ + V S+V I+ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVSQLLSVTNNWRLRLRVFAPDDDLPIVASLVDIWASANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|167836051|ref|ZP_02462934.1| NADH dehydrogenase subunit C [Burkholderia thailandensis MSMB43]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V +VGEL+L V D + + LRDD F +IDL
Sbjct: 1 MASKIETLKANLEAALGARAVSLVEAVGELTLVVKASDYLEVAKQLRDDRSLGFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ + RF V H LS N RLRV++ + VPS+V I+ A+W+
Sbjct: 61 CGIDYQTYGDGAYDGPRFAAVLHLLSVANNWRLRVRVFAPDDDLPIVPSVVDIWSSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|170698111|ref|ZP_02889191.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia ambifaria
IOP40-10]
gi|172061207|ref|YP_001808859.1| NADH dehydrogenase subunit C [Burkholderia ambifaria MC40-6]
gi|218534293|sp|B1YTQ5|NUOC_BURA4 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|170136969|gb|EDT05217.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia ambifaria
IOP40-10]
gi|171993724|gb|ACB64643.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia ambifaria
MC40-6]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + LRDDP F +IDL
Sbjct: 1 MASKIEILKANLEAALGARVVSLTEAIGELTLVVKASDYLEVAKTLRDDPKLRFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V LS N RLR+++ + V S+V I+ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVSQLLSVTNNWRLRLRVFAPDDDLPIVASLVDIWTSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|224824821|ref|ZP_03697928.1| NADH (or F420H2) dehydrogenase, subunit C [Lutiella nitroferrum
2002]
gi|224603314|gb|EEG09490.1| NADH (or F420H2) dehydrogenase, subunit C [Lutiella nitroferrum
2002]
Length = 197
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + + + ++ EL++ ++V + S LRD F +IDL
Sbjct: 1 MASKMEALKSVVEQVLGDRLVQSTLALDELTIVCKAENIVEVASLLRDHAELSFEQLIDL 60
Query: 61 CGVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ RF VV H LS K+N R+R+K E V S+VG++ A+WF
Sbjct: 61 CGVDYSSYKDQPWDGPRFAVVSHLLSLKHNWRIRLKTFAPEDDFPVVNSVVGVWNSANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D++GI F+GHPDLRR+LTDYGF GHP RKDFP++G+VE+ YD ++V+Y+PV +
Sbjct: 121 EREAFDLFGIVFDGHPDLRRLLTDYGFVGHPFRKDFPLSGYVEMRYDPTQQRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + +E
Sbjct: 181 E----------PREITPRIIREE 193
>gi|296160631|ref|ZP_06843446.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp. Ch1-1]
gi|295889157|gb|EFG68960.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp. Ch1-1]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G ++ ++GEL++ V GD +++ + LRDD F +DL
Sbjct: 1 MASKLETLKANLEAAFGGLLQSTTEAIGELTIVVKAGDYLNVATRLRDDRSLGFEQCVDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ + +PS+V I+ +W+
Sbjct: 61 CGVDYQTYADGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPDDEVPILPSVVEIWSSVNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|53718849|ref|YP_107835.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei K96243]
gi|53725817|ref|YP_103432.1| NADH dehydrogenase subunit C [Burkholderia mallei ATCC 23344]
gi|67642190|ref|ZP_00440950.1| NADH-quinone oxidoreductase chain c (nadh dehydrogenasei, chain c)
(ndh-1, chain c) [Burkholderia mallei GB8 horse 4]
gi|76809661|ref|YP_332846.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 1710b]
gi|121600967|ref|YP_992471.1| NADH dehydrogenase subunit C [Burkholderia mallei SAVP1]
gi|124384508|ref|YP_001026726.1| NADH dehydrogenase subunit C [Burkholderia mallei NCTC 10229]
gi|126440556|ref|YP_001058340.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 668]
gi|126451055|ref|YP_001079989.1| NADH dehydrogenase subunit C [Burkholderia mallei NCTC 10247]
gi|126454408|ref|YP_001065579.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 1106a]
gi|134283898|ref|ZP_01770594.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 305]
gi|167000366|ref|ZP_02266184.1| NADH dehydrogenase I, C subunit [Burkholderia mallei PRL-20]
gi|167718845|ref|ZP_02402081.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei DM98]
gi|167737854|ref|ZP_02410628.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 14]
gi|167815038|ref|ZP_02446718.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 91]
gi|167823454|ref|ZP_02454925.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 9]
gi|167845006|ref|ZP_02470514.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei B7210]
gi|167893547|ref|ZP_02480949.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 7894]
gi|167901993|ref|ZP_02489198.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei NCTC 13177]
gi|167910229|ref|ZP_02497320.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei 112]
gi|167918262|ref|ZP_02505353.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei BCC215]
gi|217420241|ref|ZP_03451747.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 576]
gi|226195449|ref|ZP_03791038.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei Pakistan
9]
gi|237811584|ref|YP_002896035.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei MSHR346]
gi|242316909|ref|ZP_04815925.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 1106b]
gi|254175567|ref|ZP_04882227.1| NADH dehydrogenase I, C subunit [Burkholderia mallei ATCC 10399]
gi|254181185|ref|ZP_04887782.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
1655]
gi|254190548|ref|ZP_04897055.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
Pasteur 52237]
gi|254195095|ref|ZP_04901524.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
S13]
gi|254202108|ref|ZP_04908471.1| NADH dehydrogenase I, C subunit [Burkholderia mallei FMH]
gi|254207438|ref|ZP_04913788.1| NADH dehydrogenase I, C subunit [Burkholderia mallei JHU]
gi|254262053|ref|ZP_04953107.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
1710a]
gi|254298535|ref|ZP_04965987.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
406e]
gi|254359860|ref|ZP_04976130.1| NADH dehydrogenase I, C subunit [Burkholderia mallei 2002721280]
gi|81380047|sp|Q63VN1|NUOC_BURPS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|81604653|sp|Q62IN7|NUOC_BURMA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|123599739|sp|Q3JUA7|NUOC_BURP1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534255|sp|A3MIA3|NUOC_BURM7 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534268|sp|A3NTA8|NUOC_BURP0 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534271|sp|A1V2L8|NUOC_BURMS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534280|sp|A2S457|NUOC_BURM9 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534296|sp|A3N7L9|NUOC_BURP6 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|52209263|emb|CAH35208.1| NADH dehydrogenase I chain C [Burkholderia pseudomallei K96243]
gi|52429240|gb|AAU49833.1| NADH dehydrogenase I, C subunit [Burkholderia mallei ATCC 23344]
gi|76579114|gb|ABA48589.1| NADH dehydrogenase I chain C [Burkholderia pseudomallei 1710b]
gi|121229777|gb|ABM52295.1| NADH dehydrogenase I, C subunit [Burkholderia mallei SAVP1]
gi|124292528|gb|ABN01797.1| NADH dehydrogenase I, C subunit [Burkholderia mallei NCTC 10229]
gi|126220049|gb|ABN83555.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 668]
gi|126228050|gb|ABN91590.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 1106a]
gi|126243925|gb|ABO07018.1| NADH dehydrogenase I, C subunit [Burkholderia mallei NCTC 10247]
gi|134244687|gb|EBA44785.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 305]
gi|147746355|gb|EDK53432.1| NADH dehydrogenase I, C subunit [Burkholderia mallei FMH]
gi|147751332|gb|EDK58399.1| NADH dehydrogenase I, C subunit [Burkholderia mallei JHU]
gi|148029100|gb|EDK87005.1| NADH dehydrogenase I, C subunit [Burkholderia mallei 2002721280]
gi|157808081|gb|EDO85251.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
406e]
gi|157938223|gb|EDO93893.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
Pasteur 52237]
gi|160696611|gb|EDP86581.1| NADH dehydrogenase I, C subunit [Burkholderia mallei ATCC 10399]
gi|169651843|gb|EDS84536.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
S13]
gi|184211723|gb|EDU08766.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
1655]
gi|217397545|gb|EEC37561.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 576]
gi|225932651|gb|EEH28649.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei Pakistan
9]
gi|237503483|gb|ACQ95801.1| NADH dehydrogenase subunit C [Burkholderia pseudomallei MSHR346]
gi|238523286|gb|EEP86725.1| NADH-quinone oxidoreductase chain c (nadh dehydrogenasei, chain c)
(ndh-1, chain c) [Burkholderia mallei GB8 horse 4]
gi|242140148|gb|EES26550.1| NADH dehydrogenase I, C subunit [Burkholderia pseudomallei 1106b]
gi|243063700|gb|EES45886.1| NADH dehydrogenase I, C subunit [Burkholderia mallei PRL-20]
gi|254220742|gb|EET10126.1| NADH-quinone oxidoreductase, C subunit [Burkholderia pseudomallei
1710a]
Length = 200
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 117/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V +VGEL+L V D + + LRDD F +IDL
Sbjct: 1 MASKIETLKANLEAALGARAVSLVEAVGELTLVVKASDYLEVAKQLRDDRSLGFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS N RLRV++ ++ VPS+V I+ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVLHLLSVANNWRLRVRVFASDDDLPIVPSVVDIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPQEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|17546779|ref|NP_520181.1| NADH dehydrogenase subunit C [Ralstonia solanacearum GMI1000]
gi|81504308|sp|Q8XXQ3|NUOC_RALSO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|17429079|emb|CAD15767.1| probable nadh dehydrogenaseI(chain c) oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 200
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + + ++ +VGE++L V D + LRDD F +IDL
Sbjct: 1 MTDKLATLQSALEKALGNRIQSLTEAVGEITLVVKAADYLETMRTLRDDATLKFEQLIDL 60
Query: 61 CGVDFL------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ RF V H LS +N R+RV++ + S+V ++ ADWF
Sbjct: 61 CGVDYSAYGDGAWNGPRFAAVSHLLSVTHNWRVRVRVFAPDDDLPVVASVVDVWNAADWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++V+Y+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|330817790|ref|YP_004361495.1| NADH dehydrogenase, subunit C [Burkholderia gladioli BSR3]
gi|327370183|gb|AEA61539.1| NADH dehydrogenase, subunit C [Burkholderia gladioli BSR3]
Length = 200
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D V + + LRDD F +IDL
Sbjct: 1 MASKIETLKANLEAALGERVVSLTEAIGELTLVVRARDYVEVATQLRDDRKLGFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V LS N RLR+++ + + S+V ++ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVLQLLSITNNWRLRLRVFAPDDDLPILASMVEVWSSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D++GI FEGHPDLRRILTDYGF GHP RKDFP++G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLFGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|145932432|ref|YP_001165343.1| NADH dehydrogenase subunit 9 [Phytophthora ramorum]
gi|110169630|gb|ABG54095.1| NADH dehydrogenase subunit 9 [Phytophthora ramorum]
gi|188037994|gb|ACD46612.1| NADH dehydrogenase subunit 9 [Phytophthora ramorum]
Length = 188
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ +++ + EL +++ L+ + F ++ F + ++C
Sbjct: 1 MKLLKKFSQHLLQILP--IINYTLYKNELCINISRNKLIPVLFFFKNHTTSQFKVLSEIC 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD++++ RF+++Y+ LS ++N RL++KI V E + V SI+ IY A+W EREVWDM+G
Sbjct: 59 AVDYINKKKRFEIIYNLLSIRFNTRLKIKITVNELQPVDSIIPIYKAANWCEREVWDMFG 118
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFF HPDLRRILTDYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F
Sbjct: 119 IFFLNHPDLRRILTDYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRLFEF 178
Query: 182 LSPWE 186
+PW+
Sbjct: 179 NNPWD 183
>gi|294340859|emb|CAZ89254.1| putative NADH (or F420H2) dehydrogenase, subunit C (NuoC)
[Thiomonas sp. 3As]
Length = 209
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 89/203 (43%), Positives = 114/203 (56%), Gaps = 19/203 (9%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + + + SVGEL+LDV +C LRDD F +IDL
Sbjct: 1 MTSKLEQLDTALRAALGERIVALQASVGELTLDVAPAHYRDVCLALRDDAELHFEQLIDL 60
Query: 61 CGVDFLSRSN-------RFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADW 111
CGVD+ N RF VV H LS K+N RLRV++ A+ SI I+ A+W
Sbjct: 61 CGVDYAQYGNAVRDEAGRFMVVVHLLSLKHNWRLRVRVRCADDDLPLVASINDIWNSANW 120
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
FERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD K+V+Y+PV
Sbjct: 121 FEREAFDLYGIIFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPDSKRVIYQPVT 180
Query: 172 LMQEHRDYDFLSPWEGVNSLFAK 194
+ P E + +
Sbjct: 181 IE----------PREITPRVIRE 193
>gi|187923342|ref|YP_001894984.1| NADH dehydrogenase subunit C [Burkholderia phytofirmans PsJN]
gi|218534258|sp|B2T2E9|NUOC_BURPP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|187714536|gb|ACD15760.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia
phytofirmans PsJN]
Length = 200
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + +F G + ++GEL++ V D +++ + LRDD F +DL
Sbjct: 1 MASKLETLKANLEAAFGGLLLNLSEAIGELTIVVKASDYLNVATRLRDDRSLGFEQCVDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ + +PS+V I+ +W+
Sbjct: 61 CGVDYQTYAEGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPDDEVPILPSVVEIWNSVNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|115352336|ref|YP_774175.1| NADH dehydrogenase subunit C [Burkholderia ambifaria AMMD]
gi|122322643|sp|Q0BDD2|NUOC_BURCM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|115282324|gb|ABI87841.1| NADH dehydrogenase subunit C [Burkholderia ambifaria AMMD]
Length = 200
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KIE L + + V ++GEL+L V D + + LRDDP CF +IDL
Sbjct: 1 MASKIEILKANLEAALGARVVSLTEAIGELTLVVKASDYLEVAKTLRDDPKLCFEQLIDL 60
Query: 61 CGVDFLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + RF V LS N RLR+++ + V S+V I+ A+W+
Sbjct: 61 CGVDYQTYGDGAYDGPRFAAVSQLLSVTNNWRLRLRVFAPDDDLPIVASLVDIWTSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|9695380|ref|NP_037602.1| NADH dehydrogenase subunit 9 [Phytophthora infestans]
gi|6692633|gb|AAF24776.1|U17009_8 NADH dehydrogenase subunit 9 [Phytophthora infestans]
gi|58012138|gb|AAW62546.1| NADH dehydrogenase subunit 9 [Phytophthora infestans]
gi|58201977|gb|AAW67032.1| NADH dehydrogenase subunit 9 [Phytophthora infestans]
gi|58202024|gb|AAW67078.1| NADH dehydrogenase subunit 9 [Phytophthora infestans]
Length = 188
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 75/185 (40%), Positives = 125/185 (67%), Gaps = 2/185 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ Y++ + EL +++ L+ + F ++ + F + ++C
Sbjct: 1 MKILKKFSQYLLQILP--IINYTLYKNELCINISSDKLIPILFFFKNHTNTQFKVLSEIC 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD++++ RF+++Y+ LS ++N RL++KI + E + + SI+ IY A+W EREVWDM+G
Sbjct: 59 AVDYINKEKRFEIIYNLLSIRFNSRLKIKITINELQPINSIIKIYRAANWCEREVWDMFG 118
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFF HPDLRRILTDYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F
Sbjct: 119 IFFLNHPDLRRILTDYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRVFEF 178
Query: 182 LSPWE 186
+PW+
Sbjct: 179 NNPWD 183
>gi|74317162|ref|YP_314902.1| NADH dehydrogenase subunit C [Thiobacillus denitrificans ATCC
25259]
gi|123611052|sp|Q3SEX6|NUOC_THIDA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|74056657|gb|AAZ97097.1| NADH dehydrogenase I chain C [Thiobacillus denitrificans ATCC
25259]
Length = 200
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 104/181 (57%), Gaps = 8/181 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E L + N+ ++ + +GEL+L V LRD P C F +IDL
Sbjct: 1 MSITLESLSACLKNALGDALVQTIERLGELTLVVKPQAYAPAMLALRDHPDCRFEQLIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSVP--SIVGIYPGADWF 112
CGVD+ VV H LS N R+RV++ + S+V I+P A WF
Sbjct: 61 CGVDYSGYGEGAWEGPRFAVVAHLLSVSKNARVRVRVFCPDDDLPAVASVVDIWPAASWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD ++V+Y+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGNVEMRYDPTQQRVIYQPVSI 180
Query: 173 M 173
Sbjct: 181 E 181
>gi|50261313|ref|YP_052922.1| NADH dehydrogenase subunit 9 [Saprolegnia ferax]
gi|48237626|gb|AAT40675.1| NADH dehydrogenase subunit 9 [Saprolegnia ferax]
Length = 187
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 129/185 (69%), Gaps = 3/185 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M G Y++ + + + ELSL++ ++ + FL+ +C + I D+
Sbjct: 1 MTLN-TKYGQYLLKTLP--IINYTFNKKELSLNIPANKMIPIFFFLKYHTNCQYKVISDI 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
C VD+L+R NRF+V+Y+ LS ++N R+R+KI + E +S+ SI IY GA W+EREVWDM+
Sbjct: 58 CAVDYLNRLNRFEVIYNLLSIRFNTRIRIKIIINELQSIDSITNIYKGASWWEREVWDMF 117
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GIFF HPDLRRILTDYGFEG+PLRKDFP++G++E++Y++ K+VVY P+ L Q++R ++
Sbjct: 118 GIFFINHPDLRRILTDYGFEGYPLRKDFPLSGYLEVYYNELKKRVVYEPIHLSQKYRLFE 177
Query: 181 FLSPW 185
F SPW
Sbjct: 178 FNSPW 182
>gi|300691027|ref|YP_003752022.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum
PSI07]
gi|299078087|emb|CBJ50730.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum
PSI07]
Length = 200
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 112/204 (54%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ L + + ++ +VGE++L V D + LRDD F +IDL
Sbjct: 1 MTDKLATLKAALEKALGNRIQGLTEAVGEITLLVKAADYLETMRTLRDDVTLKFEQLIDL 60
Query: 61 CGVDFL------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ RF V H LS +N RLRV++ + S+V I+ A+WF
Sbjct: 61 CGVDYSAYGDGAWNGPRFAAVSHLLSVTHNWRLRVRVFAPDDDLPVVASVVDIWDAANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD ++V+Y+PV +
Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 E----------PREITPRVIREDQ 194
>gi|145932338|ref|YP_001165386.1| NADH dehydrogenase subunit 9 [Phytophthora sojae]
gi|110169581|gb|ABG54047.1| NADH dehydrogenase subunit 9 [Phytophthora sojae]
Length = 188
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 126/185 (68%), Gaps = 2/185 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ Y++ + EL +++ L+ + FL++ +C F + ++C
Sbjct: 1 MKLLQKFSQYLLQILP--IINYTLYKNELCINIPTNKLIPILFFLKNHTNCQFKLLSEIC 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD++++ RF+++Y+ LS ++N RL+VKI + E + V SI+ IY A+W EREVWDM+G
Sbjct: 59 AVDYINKEKRFEIIYNLLSIRFNSRLKVKIMINELQPVDSIIHIYKAANWCEREVWDMFG 118
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFF H DLRRILTDYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F
Sbjct: 119 IFFLNHNDLRRILTDYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRLFEF 178
Query: 182 LSPWE 186
+PW+
Sbjct: 179 NNPWD 183
>gi|84508616|ref|YP_448663.1| NADH dehydrogenase subunit 9 [Desmarestia viridis]
gi|45925648|gb|AAS79049.1| NADH dehydrogenase subunit 9 [Desmarestia viridis]
Length = 191
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 2/192 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + V+ E+ + V L++ +FL + F + +
Sbjct: 1 MSNSLIVYATSLTRLLP--VQTFQVFGHEIVISVPKKYLLATLTFLHHHSNGNFQMLTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RF+VVY L+ + N RLRVK E +PS+V ++P A+W+ERE+WD++
Sbjct: 59 SGVDYPDREERFEVVYDLLNVRANCRLRVKTCTDEINPLPSVVSLFPSANWWEREIWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GIFF HPDLRRILTDYGFEGHPLRKDFP++G+ EL YD+ + VV +EL QE R ++
Sbjct: 119 GIFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFN 178
Query: 181 FLSPWEGVNSLF 192
F PW N
Sbjct: 179 FHIPWSQNNKSI 190
>gi|67458957|ref|YP_246581.1| NADH dehydrogenase subunit C [Rickettsia felis URRWXCal2]
gi|75536605|sp|Q4UM07|NUOC_RICFE RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|67004490|gb|AAY61416.1| NADH dehydrogenase I chain C [Rickettsia felis URRWXCal2]
Length = 207
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + S + + L+ V+ L+ L++ F + DL G
Sbjct: 2 TLDKLIEKLAAK-SSILITPIIVKDYLAYQVEPNFLLPFLKALKESEELRFTVLTDLFGT 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF R RF+V+Y+ LS K N+RL +K+ ++E +++PS + I+ + W+EREV+DMYG+
Sbjct: 61 DFPERDKRFEVIYNLLSLKLNKRLIIKVYISEKETIPSAMNIFNASCWYEREVYDMYGVN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F+G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD+K+KKV Y PV+L E+R++DF S
Sbjct: 121 FDGNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSKDDM 201
W + + ++ D+
Sbjct: 181 HWHSPSYVLPGDEKATDV 198
>gi|73540666|ref|YP_295186.1| NADH dehydrogenase subunit C [Ralstonia eutropha JMP134]
gi|123625483|sp|Q473U1|NUOC_RALEJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|72118079|gb|AAZ60342.1| NADH (or F420H2) dehydrogenase, subunit C [Ralstonia eutropha
JMP134]
Length = 199
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 80/203 (39%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ K+E L + V+ + + GEL+L V D + + LRDDP F +IDLC
Sbjct: 1 MAKLETLKAALEKVLGKRVQKLIEATGELTLIVKADDYLEVARTLRDDPSLRFEQLIDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + V H LS +N RLR+++ + VPS++ ++ +WFE
Sbjct: 61 GVDYSDFGDGAWDGLRFAAVSHLLSVTHNWRLRLRVFAPDDDFPVVPSLIDVWNSVNWFE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D YGI FEGHPDLRR+LTDYGF GHP RKDFPV+G+VE+ YD + K+V+Y+PV +
Sbjct: 121 REAFDFYGIVFEGHPDLRRLLTDYGFVGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRVIREEN 193
>gi|47214471|emb|CAG12476.1| unnamed protein product [Tetraodon nigroviridis]
Length = 325
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 127/270 (47%), Gaps = 74/270 (27%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ G+Y+ V+ + EL + + ++ + +FLRD + F N+IDL
Sbjct: 52 NQLAAFGEYVSEMMPKYVQQVQVTCYNELEVMIHPDGVIPVLTFLRDHTNAQFRNMIDLT 111
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREV----- 116
VD +R NRF++VY+ LS ++N R+RVK E V S V ++ A+W+EREV
Sbjct: 112 AVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPVDSAVPVHIAANWYEREVSVGPR 171
Query: 117 --------------------WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE- 155
WDM+G+FF HPDLRRILTDYGFEGHP RKDFP++G+VE
Sbjct: 172 VRRRDGVCEDAGDRNLRVQVWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEV 231
Query: 156 -------------------------------------------LHYDDKVKKVVYRPVEL 172
+ YDD+VK+VV PVEL
Sbjct: 232 SSLLPVRTVLRISFMTVADVGWSLKSALLFRFPVLKALLLLPQVRYDDEVKRVVAEPVEL 291
Query: 173 MQEHRDYDFLSPWEGVNSLFAKEDSKDDMS 202
QE R +D +PWE +F + +
Sbjct: 292 SQEFRKFDLNTPWE----VFPAHREAKEAT 317
>gi|296136704|ref|YP_003643946.1| NADH (or F420H2) dehydrogenase, subunit C [Thiomonas intermedia
K12]
gi|295796826|gb|ADG31616.1| NADH (or F420H2) dehydrogenase, subunit C [Thiomonas intermedia
K12]
Length = 209
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 90/203 (44%), Positives = 115/203 (56%), Gaps = 19/203 (9%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + + + SVGEL+LDV +C LRDD F +IDL
Sbjct: 1 MTSKLEQLDTALRAALGERIVALQASVGELTLDVAPAHYRDVCLALRDDAELHFEQLIDL 60
Query: 61 CGVDFLSRSN-------RFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADW 111
CGVD+ N RF VV H LS K+NRRLRV++ A+ SI I+ A+W
Sbjct: 61 CGVDYAQYGNAVRDEAGRFMVVLHLLSLKHNRRLRVRVRCADDDLPLVASINDIWNSANW 120
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
FERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD K+V+Y+PV
Sbjct: 121 FEREAFDLYGIIFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPDSKRVIYQPVT 180
Query: 172 LMQEHRDYDFLSPWEGVNSLFAK 194
+ P E + +
Sbjct: 181 IE----------PREITPRVIRE 193
>gi|84508538|ref|YP_448702.1| NADH dehydrogenase subunit 9 [Dictyota dichotoma]
gi|45925706|gb|AAS79087.1| NADH dehydrogenase subunit 9 [Dictyota dichotoma]
Length = 192
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 2/183 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
I + + ++ + E+ + V L+ + FL + F + + G
Sbjct: 7 NSIVAYANKLTKLLP--IQTYKVNGQEMVISVSKEHLLVVLIFLHHHTNGGFQLLTCVSG 64
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R NRF++VY LS YN R+RVK E V S V ++P A+W+ERE+WD++G+
Sbjct: 65 VDYPERENRFEIVYELLSLGYNCRIRVKTYTNEVNPVFSCVSLFPCANWWEREIWDLFGV 124
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHPLRKDFP++GFVEL YD+ + VV P+EL QE R + F
Sbjct: 125 FFFTHPDLRRILTDYGFEGHPLRKDFPLSGFVELRYDEDQRVVVCEPIELSQEFRMFSFS 184
Query: 183 SPW 185
+PW
Sbjct: 185 TPW 187
>gi|299830460|ref|YP_003734831.1| NADH dehydrogenase subunit 9 [Pythium ultimum]
gi|299830479|ref|YP_003734850.1| NADH dehydrogenase subunit 9 [Pythium ultimum]
gi|269810837|gb|ACZ43866.1| NADH dehydrogenase subunit 9 [Pythium ultimum]
gi|269810856|gb|ACZ43885.1| NADH dehydrogenase subunit 9 [Pythium ultimum]
gi|269812150|gb|ACZ44448.1| NADH dehydrogenase subunit 9 [Pythium ultimum]
gi|269812169|gb|ACZ44467.1| NADH dehydrogenase subunit 9 [Pythium ultimum]
Length = 187
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 79/184 (42%), Positives = 125/184 (67%), Gaps = 2/184 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + Y++ + ELS+++ +V + FL++ + F + D+C
Sbjct: 1 MKLTQKFSQYLLQILP--IINYTTYKNELSINIPFNKMVPIFFFLKNHTNTQFKVLSDIC 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD++++ RF+++Y+ LS ++N RL+VKI + E + V SI+ IY A+W ERE WDM+G
Sbjct: 59 VVDYINKKKRFEIIYNLLSIRFNSRLKVKILINELQPVDSIISIYKTANWCEREAWDMFG 118
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFF HPDLRRILTDYGFEGHPLRKDFP++G++E++Y++ K+VVY P+ L Q++R ++F
Sbjct: 119 IFFINHPDLRRILTDYGFEGHPLRKDFPLSGYLEVYYNELKKRVVYEPINLSQQYRLFEF 178
Query: 182 LSPW 185
SPW
Sbjct: 179 NSPW 182
>gi|7545239|gb|AAA32025.2| NADH dehydrogenase [Phytophthora megasperma]
Length = 188
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 125/185 (67%), Gaps = 2/185 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + Y++ + EL +++ L+ + FL++ + F + ++C
Sbjct: 1 MKLLTKFSQYLLQILP--IINYTLYKNELCINIPTKKLIPILFFLKNHTNSQFKILSEIC 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD++++ RF+++Y+ LS ++N RL+VKI + E + V SI+ IY A+W EREVWDM+G
Sbjct: 59 AVDYINKEKRFEIIYNLLSIRFNSRLKVKITINEVQPVDSIINIYKAANWCEREVWDMFG 118
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
IFF HPDLRRILTDYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F
Sbjct: 119 IFFSNHPDLRRILTDYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRLFEF 178
Query: 182 LSPWE 186
+PW+
Sbjct: 179 NNPWD 183
>gi|194289161|ref|YP_002005068.1| NADH dehydrogenase subunit c [Cupriavidus taiwanensis LMG 19424]
gi|218534267|sp|B3R3W9|NUOC_CUPTR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|193222996|emb|CAQ69001.1| NADH:ubiquinone oxidoreductase complex I, chain C [Cupriavidus
taiwanensis LMG 19424]
Length = 199
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ K++ L + + V+ V + GEL+L V D + + LRDDP F +IDLC
Sbjct: 1 MAKLDTLKAALEKALGKRVQNLVEATGELTLIVKADDYLDVAQILRDDPSLRFEQLIDLC 60
Query: 62 GVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+L RF V LS +N RLR++ ++ +PS++ ++ +WFE
Sbjct: 61 GVDYLEYADGAWDGPRFAAVSQLLSVTHNWRLRLRAFASDDDFPVLPSLINVWNSVNWFE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D YGI F+GHPDLRRILTDYGF GHP RKDFPV+GFVE+ YD K+V+Y+PV +
Sbjct: 121 REAFDFYGIVFDGHPDLRRILTDYGFVGHPFRKDFPVSGFVEMRYDPDQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 181 ----------PRELTPRVIREDK 193
>gi|299507926|emb|CBN88264.1| NADH dehydrogenase subunit 9 [Asplenium nidus]
Length = 226
Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 88/185 (47%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E IV + S E L L L FLR + F +ID+CGVD
Sbjct: 6 LEQFA--IVPLVPKRIHRFRTSKKENILCATPDYLFQLPWFLRCHTNTRFGILIDICGVD 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ S+ RF VVY+ LS +YN R+R++I V E V S++ I+P A W+EREVWDM+G+ F
Sbjct: 64 YPSQKRRFGVVYNLLSIQYNSRIRIRIGVDEITPVSSVISIFPSAGWWEREVWDMFGLIF 123
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
H DLRRILTDYGFEGHPLRKDFP++G+ E+ YDD K+VV PVE+ QE R +D SP
Sbjct: 124 SHHHDLRRILTDYGFEGHPLRKDFPLSGYAEVRYDDSEKRVVSEPVEMTQEFRYFDLASP 183
Query: 185 WEGVN 189
W+ +
Sbjct: 184 WQLMP 188
>gi|186920123|ref|YP_001874777.1| NADH dehydrogenase subunit 9 [Hemiselmis andersenii]
gi|186461069|gb|ACC78231.1| NADH dehydrogenase subunit 9 [Hemiselmis andersenii]
Length = 186
Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 80/172 (46%), Positives = 109/172 (63%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
SV + GE+ ++V+ L + +FL+ +C + ++D+ +D RF
Sbjct: 11 KILKYSVICIYYNFGEVVIEVEYNKLKKVIAFLKGHENCLYKLLVDIVVIDCPENPLRFK 70
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
+VY S KYN R++V V E V SI +Y A W ERE WDMYGI+FEGHPDLRRI
Sbjct: 71 IVYLLCSVKYNLRIKVVTRVDEITPVSSITDLYKNAGWMEREGWDMYGIYFEGHPDLRRI 130
Query: 134 LTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
LTDYGFEG+PLRKDFP++G+ E+ YDD K+V++ P+E+ QE R Y F SPW
Sbjct: 131 LTDYGFEGYPLRKDFPLSGYKEVRYDDSQKRVIFEPLEMSQEFRIYQFTSPW 182
>gi|113867072|ref|YP_725561.1| NADH dehydrogenase subunit C [Ralstonia eutropha H16]
gi|123329441|sp|Q0KCS8|NUOC_RALEH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|113525848|emb|CAJ92193.1| NADH dehydrogenase chain C [Ralstonia eutropha H16]
Length = 198
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ K++ L + + V+ + + GEL+L V D + + LRDDP F +IDLC
Sbjct: 1 MAKLDILKAALEKALGKRVQNLIEATGELTLIVKADDYLEVARILRDDPSLRFEQLIDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + V LS +N RLRV++ + +PS++ ++ G +WFE
Sbjct: 61 GVDYSEYGDGAWDGLRFAAVSQLLSITHNWRLRVRVFAPDDDFPVLPSLIDVWNGVNWFE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D YGI F+GHPDLRRILTDYGF GHP RKDFPV+GFVE+ YD + K+V+Y+PV +
Sbjct: 121 REAFDFYGIVFDGHPDLRRILTDYGFVGHPFRKDFPVSGFVEMRYDPEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 181 ----------PREITPRVIREDN 193
>gi|307730338|ref|YP_003907562.1| NADH (or F420H2) dehydrogenase subunit C [Burkholderia sp.
CCGE1003]
gi|307584873|gb|ADN58271.1| NADH (or F420H2) dehydrogenase, subunit C [Burkholderia sp.
CCGE1003]
Length = 200
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K E L + +F G + ++GEL++ V D +++ + LRDD F ++DL
Sbjct: 1 MASKFETLKANLEAAFGGLLLSTTEAIGELTIVVKASDYLNVATRLRDDRSLGFDQMMDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + RF V H LS + N RLR+++ + PS+V I+ A+W+
Sbjct: 61 CGVDYQTYADGAYDGPRFAAVLHLLSVQNNWRLRLRVFAPDDDLPLLPSVVDIWNSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+VVY+PV +
Sbjct: 121 EREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEEKRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PREITPRVIRED 193
>gi|239811626|gb|ACS27113.1| NADH dehydrogenase subunit 9 [Heterosigma akashiwo]
gi|239811666|gb|ACS27152.1| NADH dehydrogenase subunit 9 [Heterosigma akashiwo]
gi|288871923|dbj|BAI70609.1| NADH dehydrogenase subunit 9 [Heterosigma akashiwo]
Length = 188
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + I + + + V E+ + V L+ FL+ + + +
Sbjct: 1 MNQIIFNFAFSLQSLIP--VENIKVFKNEIIVVVSSQFLLETVEFLKLHTQTQYKILTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ + RF+VVY FL+ YN R+RVK V E +PS++ ++P A+W+EREVWD++
Sbjct: 59 SGVDYPEYNKRFEVVYDFLTLVYNGRIRVKTYVDEVTPLPSLIPLFPCANWWEREVWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE-LMQEHRDY 179
G+FF H DLRRILTDYGFEGHP+RK+FP++G+VE+ YD+ K+VV P++ QE R +
Sbjct: 119 GVFFSNHTDLRRILTDYGFEGHPMRKNFPLSGYVEVRYDENQKRVVCEPIKQFSQEFRSF 178
Query: 180 DFLSPW 185
+F SPW
Sbjct: 179 NFSSPW 184
>gi|15150743|ref|NP_150409.1| NADH dehydrogenase subunit 9 [Pylaiella littoralis]
gi|15147749|emb|CAC50850.1| NADH dehydrogenase subunit 9 [Pylaiella littoralis]
Length = 190
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ + + V+ E+ + V L+ +FL + F + +
Sbjct: 1 MLSSLVVYAKSLTRLLP--VQTFQVFGHEIVISVSKNHLLGTLTFLHHHSNGNFQMLTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVDF R RF+VVY L+ + N RLRV+ E +PSI ++P A+W+ERE+WD++
Sbjct: 59 SGVDFPEREERFEVVYDLLNVRSNSRLRVRTHTDEINPLPSITSLFPSANWWEREIWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGFEGHPLRKDFP++G+ EL YD+ K VV +EL QE R +D
Sbjct: 119 GVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCESIELSQEFRTFD 178
Query: 181 FLSPW 185
F PW
Sbjct: 179 FHMPW 183
>gi|171058187|ref|YP_001790536.1| NADH (or F420H2) dehydrogenase subunit C [Leptothrix cholodnii
SP-6]
gi|218534295|sp|B1Y829|NUOC_LEPCP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|170775632|gb|ACB33771.1| NADH (or F420H2) dehydrogenase, subunit C [Leptothrix cholodnii
SP-6]
Length = 199
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 115/204 (56%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +K++ L I + V GEL+L V D ++ LRD P F +ID+
Sbjct: 1 MTQKLDTLQAAIERVIGDRIVHLVRDRGELTLTVKATDYAAIGKTLRDHPDLGFEQLIDI 60
Query: 61 CGVDFLSRSN------RFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + R+ V H LS ++N RLR+K+ + S+ I+ GA+WF
Sbjct: 61 CGVDYSGYKDGGYEGLRYAAVSHLLSVQHNWRLRLKVFAPDDDFPLVASLTPIWSGANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +DMYGI F+GH DLRRILTDYGF GHP+RKDFPVTG VE+ YD + K+V+Y+PV +
Sbjct: 121 EREAFDMYGIVFDGHTDLRRILTDYGFIGHPMRKDFPVTGHVEMRYDPEQKRVIYQPVSI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 181 E----------PREITPRIIREDN 194
>gi|319738243|emb|CBJ18019.1| NADH dehydrogenase subunit 9 [Ectocarpus siliculosus]
Length = 190
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M R + + V+ E+ + V L++ +FL + F + +
Sbjct: 1 MFRSLIVYAKSLTRLLP--VQTFQVFGHEIVISVAKKHLLATLTFLHHHSNGNFQMLTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RF++VY L+ + N R+R+K E +PS+V ++P A+W+ERE+WD++
Sbjct: 59 SGVDYPEREERFEIVYDLLNVRCNSRIRIKTHTDEVNPLPSVVSLFPSANWWEREIWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGFEGHPLRKDFP++G++EL YD+ + VV P+EL QE R ++
Sbjct: 119 GVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYLELRYDEDQRVVVCEPIELSQEFRSFN 178
Query: 181 FLSPWEG 187
F PW
Sbjct: 179 FHIPWSQ 185
>gi|34496398|ref|NP_900613.1| NADH dehydrogenase subunit C [Chromobacterium violaceum ATCC 12472]
gi|81656635|sp|Q7NZH9|NUOC_CHRVO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|34102251|gb|AAQ58617.1| NADH-ubiquinone oxidoreductase, chain C [Chromobacterium violaceum
ATCC 12472]
Length = 198
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+K+E LG + + + + ++ EL++ DL+S+ LRD F ID+C
Sbjct: 3 SKKMEALGSVVAEALGDKLVRSTLALDELTIVCKASDLLSVAQTLRDHADLAFEQCIDVC 62
Query: 62 GVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
G+D+ RF VYH LS K N R+R+++ + +PS+ GI+ A+WFE
Sbjct: 63 GMDYSAYRDEPWDGPRFAAVYHLLSVKLNHRIRLRVFAEDDDFPVIPSVNGIWNAANWFE 122
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI FEGHPDLRR+LTDYGF GHP RKDFP++G+VE+ YD ++V+Y+PV +
Sbjct: 123 REAFDLYGIVFEGHPDLRRLLTDYGFVGHPFRKDFPLSGYVEMRYDPTQQRVIYQPVTIE 182
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 183 ----------PREITPRIIREEN 195
>gi|332526749|ref|ZP_08402851.1| NADH dehydrogenase (quinone) [Rubrivivax benzoatilyticus JA2]
gi|332111152|gb|EGJ11184.1| NADH dehydrogenase (quinone) [Rubrivivax benzoatilyticus JA2]
Length = 199
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++ L + ++ +G +R +V ++GE+++ V D + + LRD P F ++DL
Sbjct: 1 MSIRLDLLQSALESALAGKIRTSVRALGEITITVGAADYLDVARTLRDTPELRFEQLVDL 60
Query: 61 CGVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ RF VV H LS +N RLR+K+ + S+ I+ A+WF
Sbjct: 61 CGVDYSDYRNQPWDGPRFCVVSHLLSVTHNWRLRLKVFCPDDDLPVVASVNDIWGSANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGH DLRRILTDYGF GHP+RKDFP TG VE+ YD + K+V+Y+PV +
Sbjct: 121 EREAFDLYGIVFEGHLDLRRILTDYGFIGHPMRKDFPTTGNVEMRYDPEKKRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + + +++
Sbjct: 181 E----------PREIIPRVVREDN 194
>gi|84508576|ref|YP_448624.1| NADH dehydrogenase subunit 9 [Fucus vesiculosus]
gi|39653299|gb|AAR29318.1| NADH dehydrogenase subunit 9 [Fucus vesiculosus]
Length = 191
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/187 (41%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M R + + V+ E+ ++V L++ FL + + + +
Sbjct: 1 MFRSLIVYATSLTRLLP--VQTFQVFGHEIVINVSKKYLLATLMFLHHHSNSNYQLLTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RF++VY L+ + N R+R+K E +PS+V IYP A+W+ERE+WD++
Sbjct: 59 SGVDYPERDERFEIVYDLLNIRSNSRIRIKTQTDEINPLPSVVSIYPSANWWEREIWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF GHPDLRR+LTDYGFEGHPLRKDFP++G+ EL YD+ + VV P+EL QE R +D
Sbjct: 119 GVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRTFD 178
Query: 181 FLSPWEG 187
F PW
Sbjct: 179 FHIPWSQ 185
>gi|94309874|ref|YP_583084.1| NADH dehydrogenase subunit C [Cupriavidus metallidurans CH34]
gi|218534311|sp|Q1LPW1|NUOC_RALME RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|93353726|gb|ABF07815.1| NADH dehydrogenase chain C [Cupriavidus metallidurans CH34]
Length = 199
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 113/203 (55%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ L + V+ + + GEL+L V D + + LRDDP F ++DLC
Sbjct: 1 MANLDTLKAALEKVLGKRVQNLIEATGELTLIVKAADYLEVARLLRDDPSLRFEQLLDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + V LS +N RLR+++ + +PS++ ++ +WFE
Sbjct: 61 GVDYSDYAEGAWDGLRFAAVSQLLSVTHNWRLRLRVFAPDDDFPVLPSVINVWNSVNWFE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D YGI FEGHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+V+Y+PV +
Sbjct: 121 REAFDFYGIVFEGHPDLRRILTDYGFVGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREVTPRVIREEN 193
>gi|56416678|ref|YP_153752.1| NADH-ubiquinone oxidoreductase subunit [Anaplasma marginale str.
St. Maries]
gi|222475043|ref|YP_002563458.1| NADH-ubiquinone oxidoreductase subunit (nuoC1) [Anaplasma marginale
str. Florida]
gi|254994890|ref|ZP_05277080.1| NADH-ubiquinone oxidoreductase subunit (nuoC1) [Anaplasma marginale
str. Mississippi]
gi|255003023|ref|ZP_05277987.1| NADH-ubiquinone oxidoreductase subunit (nuoC1) [Anaplasma marginale
str. Puerto Rico]
gi|255004146|ref|ZP_05278947.1| NADH-ubiquinone oxidoreductase subunit (nuoC1) [Anaplasma marginale
str. Virginia]
gi|56387910|gb|AAV86497.1| NADH-ubiquinone oxidoreductase subunit [Anaplasma marginale str.
St. Maries]
gi|222419179|gb|ACM49202.1| NADH-ubiquinone oxidoreductase subunit (nuoC1) [Anaplasma marginale
str. Florida]
Length = 187
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 89/187 (47%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +E + ++ V AV S G L ++ GDL+ + LRDD F + D+
Sbjct: 1 MQQSVEHVTKHVGKILKREV--AVRSDGVLECRLEAGDLLKCITTLRDDEKSKFKILTDI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+ +R RFDVVY LS +N R+ K+ + EG +VPS+ ++ A WFEREV+DMY
Sbjct: 59 FAVDYQAREARFDVVYMLLSVAFNARICCKVPLVEGHNVPSVTSVFGSAGWFEREVFDMY 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI F+GHPDLRRILTDYGF GHP+ KDFP+TG+ E+ YD + K+VVY+PV L Q+ R++D
Sbjct: 119 GIVFDGHPDLRRILTDYGFTGHPMLKDFPLTGYDEVRYDLQKKQVVYQPVNLQQDFRNFD 178
Query: 181 FLSPWEG 187
+SPW+G
Sbjct: 179 AISPWKG 185
>gi|269958903|ref|YP_003328692.1| NADH dehydrogenase subunit C [Anaplasma centrale str. Israel]
gi|269848734|gb|ACZ49378.1| NADH dehydrogenase subunit C [Anaplasma centrale str. Israel]
Length = 187
Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats.
Identities = 83/180 (46%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDV--DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
++ ++ V + L+ + GDL+ + LRDD F + D+ VD+ +
Sbjct: 6 KHVTERVGKILKREVAVRDDGVLECRLEAGDLLKCITTLRDDEKSKFRILTDIFAVDYQA 65
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
R RFDVVY LS +N R+ K+ + EG +VPS+ ++ A WFEREV+DMYGI F+GH
Sbjct: 66 REARFDVVYMLLSVAFNARICCKVPLVEGHNVPSVTSVFGAAGWFEREVFDMYGIVFDGH 125
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
PDLRRILTDYGF GHP+ KDFP+TG+ E+ YD + K+VVY+PV L Q+ R++D +SPW+G
Sbjct: 126 PDLRRILTDYGFTGHPMLKDFPLTGYDEVRYDLQKKQVVYQPVNLQQDFRNFDAISPWKG 185
>gi|226348820|gb|ACO50724.1| NADH dehydrogenase subunit 9 [Micromonas pusilla CCMP1545]
Length = 180
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 89/158 (56%), Positives = 106/158 (67%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
E V L+ L F ++D+ VD+ SR+ RFDVVYH LS +YN RLR
Sbjct: 18 EAECVVHPSALLFFMQVLHKTTTLQFKVLVDVTAVDYPSRAKRFDVVYHLLSVQYNTRLR 77
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
VK V E V S+ +YP A+WFEREVWDM+GI F HPDLRRILTDYGF+GHPLRKDF
Sbjct: 78 VKTMVDELTPVHSLTSLYPSANWFEREVWDMFGICFLHHPDLRRILTDYGFQGHPLRKDF 137
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
P++G+VE YDD K+VV PVEL QE R +DF SPWE
Sbjct: 138 PLSGYVEFRYDDSKKRVVAEPVELSQEFRYFDFASPWE 175
>gi|71906590|ref|YP_284177.1| NADH dehydrogenase subunit C [Dechloromonas aromatica RCB]
gi|123627978|sp|Q47HH4|NUOC_DECAR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|71846211|gb|AAZ45707.1| NADH dehydrogenase subunit C [Dechloromonas aromatica RCB]
Length = 201
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + F ++ ++GE++++V D + + LRD+ F +IDL
Sbjct: 1 MSAKLETLSQNLQEHFGDKLKSLKLALGEITIEVAAADYFCVMTALRDEAAFGFEEMIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ + + VV H LS N RLRV++ + SV SI ++ A+WF
Sbjct: 61 CGVDYSTYGDGTWQGARFAVVVHLLSVANNWRLRVRVFAEDEGFPSVASITTVWASANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI F GH DLRRILTDYGF GHP RKDFP++G VE+ YD +V+Y+PV +
Sbjct: 121 EREAFDLYGIAFVGHDDLRRILTDYGFIGHPFRKDFPISGHVEMRYDPDQARVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + ++
Sbjct: 181 E----------PRENTPRIVRED 193
>gi|217970158|ref|YP_002355392.1| NADH dehydrogenase subunit C [Thauera sp. MZ1T]
gi|217507485|gb|ACK54496.1| NADH (or F420H2) dehydrogenase, subunit C [Thauera sp. MZ1T]
Length = 201
Score = 194 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 113/204 (55%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + + F ++ V GE++++V + + LRD F +IDL
Sbjct: 1 MSAKLERLSQTLRDVFGNRIQSLVLDRGEVTIEVSAAEYPRVARQLRDHADLRFEQLIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
G+D+ + N V H S K+N RLRV++ + + S+V ++P A+W+
Sbjct: 61 SGLDYSAYGNAIWEGKRFASVAHLTSVKHNWRLRVRVFADDDAFPVIDSVVDVWPSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI + GHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + +VVY+PV +
Sbjct: 121 ERESFDLYGILYSGHPDLRRILTDYGFVGHPFRKDFPVSGYVEMRYDPEQGRVVYQPVSI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + +E
Sbjct: 181 E----------PRENTPRIVREEK 194
>gi|239947492|ref|ZP_04699245.1| NADH-quinone oxidoreductase subunit C [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239921768|gb|EER21792.1| NADH-quinone oxidoreductase subunit C [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 197
Score = 194 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + +V S + L+ + L+ L++ F + DL G
Sbjct: 2 TLDKLIEKLVAKSSILITPVTVK-NYLAYKIAPNFLLPFLKALKESEELRFTVLTDLFGS 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF R RF+VVY+ LS K N+RL +K+ ++E +++PS + I+ A W+EREV+DMYGI
Sbjct: 61 DFPERDKRFEVVYNLLSLKLNKRLIIKVDISEKETIPSAMNIFSAACWYEREVYDMYGIN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F+G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD+K+KKV Y PV+L E+R++DF S
Sbjct: 121 FDGNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSK 198
W + ++
Sbjct: 181 HWHSPTYILPGDEKA 195
>gi|163855989|ref|YP_001630287.1| NADH dehydrogenase subunit C [Bordetella petrii DSM 12804]
gi|218534259|sp|A9II05|NUOC_BORPD RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|163259717|emb|CAP42018.1| NADH dehydrogenase I, 30 kDa subunit, chain C [Bordetella petrii]
Length = 209
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 29/212 (13%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++E L + + + ++GEL+L+V +++C+ LR D F IDLC
Sbjct: 3 MTRLETLKHNLQAALGADI-ALTEALGELTLEVPADQWLAVCNKLRTDAGLSFETCIDLC 61
Query: 62 GVDFLSRSN----------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIV 103
GVD+L+ N R+ VV H LS +N RLRV+ + V S++
Sbjct: 62 GVDYLTWGNGTRQAGEDKVAGVQRSRYAVVAHLLSIAHNWRLRVRTWAPDDDFPMVGSLI 121
Query: 104 GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+PG +WFERE +D++GI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD + +
Sbjct: 122 DCWPGVNWFEREAFDLFGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQR 181
Query: 164 KVVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
+V+Y+PV + P E + ++
Sbjct: 182 RVIYQPVTID----------PREITPRVVRED 203
>gi|307101738|ref|YP_003875482.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|296040729|gb|ADG85332.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|301338033|gb|ADK73325.1| NADH dehydrogenase subunit 9 [Silene latifolia]
Length = 192
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 86/175 (49%), Positives = 115/175 (65%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + F +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|326316101|ref|YP_004233773.1| NADH (or F420H2) dehydrogenase subunit C [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372937|gb|ADX45206.1| NADH (or F420H2) dehydrogenase, subunit C [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 202
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D + + R V ++ EL++ V D ++ LRD P C F ++DLCG+D+
Sbjct: 9 EALRDAVAAALGDKARDIVIALDELTVTVPAADYLAAMQLLRDAPGCRFEQLVDLCGIDY 68
Query: 66 LSRSN------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ + R+ VV H LS N+R+RVK+ + V S+ I+ A+W+ERE +
Sbjct: 69 STYGDVGTEGARYAVVSHLLSVSLNQRVRVKVFCPDDDFPVVASVSSIWNSANWYEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D+YGI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY PV +
Sbjct: 129 DLYGIVFDGHDDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDTEARRVVYEPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +E
Sbjct: 185 ------PREITPRIIREEK 197
>gi|297538954|ref|YP_003674723.1| NADH (or F420H2) dehydrogenase subunit C [Methylotenera sp. 301]
gi|297258301|gb|ADI30146.1| NADH (or F420H2) dehydrogenase, subunit C [Methylotenera sp. 301]
Length = 198
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K++ L + S + V ++ E++++ + +++C LRD F +IDL
Sbjct: 1 MSAKLDQLLSDLQASLGDKITKHVVALDEITIECKAENYLAVCQILRDATTLKFEQLIDL 60
Query: 61 CGVDFLSRSNRFD--------VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWF 112
GVD+ + + +S + RLRV + +P++V I+ A+W+
Sbjct: 61 SGVDYQTYGDGAYDGVRYAVVCHLLSVSLNHRVRLRVFAQDEDFPILPTLVDIWSVANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +DM+GI FE HPDLRR+LTDYGF GHP RKDFP+ G VE+ YD + ++V+Y+PV +
Sbjct: 121 EREAFDMFGIMFENHPDLRRLLTDYGFVGHPFRKDFPMIGNVEMRYDPEQQRVIYQPVTI 180
Query: 173 M 173
Sbjct: 181 D 181
>gi|2499319|sp|Q33994|NDUS3_BETTR RecName: Full=NADH-ubiquinone oxidoreductase 27 kDa subunit;
AltName: Full=Complex I-27kD; Short=CI-27kD; AltName:
Full=NADH dehydrogenase subunit 9
Length = 192
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 115/175 (65%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + F +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+R++ + E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRLQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|329914958|ref|ZP_08276194.1| NADH-ubiquinone oxidoreductase chain C [Oxalobacteraceae bacterium
IMCC9480]
gi|327545008|gb|EGF30333.1| NADH-ubiquinone oxidoreductase chain C [Oxalobacteraceae bacterium
IMCC9480]
Length = 198
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 117/204 (57%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+++L + ++ + N++GE++L + +S LRD P F ++DL
Sbjct: 1 MTTKLDNLQAALHSALGDHIVSLTNALGEITLVIKDSHYLSAMRVLRDHPDTRFEQLLDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
GVDF + + VV H LS +N R+RV++ ++ + S++ I+ A+W+
Sbjct: 61 AGVDFSTYGDGAWDGRRFAVVSHLLSLTHNWRVRVRVFASDDEVPVVASLIDIWSSANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D +GI FEGH DLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+V+Y+PV +
Sbjct: 121 EREAFDFFGILFEGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E V + +E
Sbjct: 181 E----------PREVVPRVIREEQ 194
>gi|149927543|ref|ZP_01915797.1| NADH dehydrogenase subunit C [Limnobacter sp. MED105]
gi|149823816|gb|EDM83042.1| NADH dehydrogenase subunit C [Limnobacter sp. MED105]
Length = 203
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 109/208 (52%), Gaps = 22/208 (10%)
Query: 1 MVRK----IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M + +E L +V + + + GE++L V + C LRD F
Sbjct: 1 MTQNQSLSLEKLSADLVAALGDRIVECKLAFGEVNLTVKADSYMESCLILRDHEDLQFEQ 60
Query: 57 IIDLCGVDFLSRSN------RFDVVYHFLSPKYNRRLRVKIAVAEGKSVP--SIVGIYPG 108
+IDLCG+D N RF VV LS N R+R+K+ + S++ ++
Sbjct: 61 LIDLCGLDRSEYGNELNESQRFWVVCQLLSVSKNMRVRLKVCCPDDDLPTVASVIDVWSS 120
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
A+W+ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD ++ +VVY+
Sbjct: 121 ANWYEREAFDLYGIVFEGHPDLRRILTDYGFVGHPFRKDFPLSGHVEMRYDPELGRVVYQ 180
Query: 169 PVELMQEHRDYDFLSPWEGVNSLFAKED 196
PV + P E + +
Sbjct: 181 PVTIE----------PREITPRIIREPQ 198
>gi|119897689|ref|YP_932902.1| NADH dehydrogenase subunit C [Azoarcus sp. BH72]
gi|218534250|sp|A1K5B0|NUOC_AZOSB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|119670102|emb|CAL94015.1| respiratory-chain NADH dehydrogenase, chain C probable [Azoarcus
sp. BH72]
Length = 201
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 116/204 (56%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + + V V GE++++V G+ + + LRD+ F ++D+
Sbjct: 1 MSAKLERLSQTLRDVLGDVVESLVVDRGEVTIEVAAGNFLDVARRLRDEAALGFEQLMDI 60
Query: 61 CGVDFL------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
G+D+ + RF V H LS K N RLR+++ + + S+V ++P A+WF
Sbjct: 61 SGIDYSAFGNGAWQGKRFASVAHLLSVKNNWRLRLRVFADDDDFPVLGSLVEVWPSANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI + GHPDLRRILTDYGF GHP RKDFP++G+VE+ YD + +VVY+PV +
Sbjct: 121 EREAFDLYGILYAGHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDPEQGRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 E----------PRENTPRIVREEN 194
>gi|323435086|ref|YP_004222304.1| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. maritima]
gi|317905639|emb|CBJ14038.1| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. maritima]
gi|319439819|emb|CBJ17529.1| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. maritima]
Length = 192
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + F +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ E + +V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRVQTCADEVTRISLVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|221068610|ref|ZP_03544715.1| NADH (or F420H2) dehydrogenase, subunit C [Comamonas testosteroni
KF-1]
gi|220713633|gb|EED69001.1| NADH (or F420H2) dehydrogenase, subunit C [Comamonas testosteroni
KF-1]
Length = 203
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 81/199 (40%), Positives = 116/199 (58%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D + + VR + GE++++V G + + LR+ P C F ++DLCGVD+
Sbjct: 9 EKLRDVVTAALGDKVRSVTLAYGEVTVEVSAGQYLDVMQILRNAPDCQFEMLLDLCGVDY 68
Query: 66 LSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ RF VV H +S N+RLRV++ A+ V SI I+ A+WFERE +
Sbjct: 69 STYAEVGKDGPRFAVVSHLMSLTLNQRLRVRVYCADDDFPVVASINPIWNSANWFEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D++GI FEGH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY+PV +
Sbjct: 129 DLFGIVFEGHEDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDAEQQRVVYQPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 185 ------PREITPRIIREEN 197
>gi|162279909|ref|NP_063974.2| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. vulgaris]
gi|37999950|sp|Q37787|NDUS3_BETVU RecName: Full=NADH-ubiquinone oxidoreductase 27 kDa subunit;
AltName: Full=Complex I-27kD; Short=CI-27kD; AltName:
Full=NADH dehydrogenase subunit 9
gi|27753503|dbj|BAA07213.2| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. vulgaris]
gi|148491411|dbj|BAA99286.2| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. vulgaris]
Length = 192
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + F +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+R++ E + +V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRLQTCADEVTRISLVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|120609952|ref|YP_969630.1| NADH (or F420H2) dehydrogenase subunit C [Acidovorax citrulli
AAC00-1]
gi|218534248|sp|A1TLL8|NUOC_ACIAC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|120588416|gb|ABM31856.1| NADH dehydrogenase subunit C [Acidovorax citrulli AAC00-1]
Length = 202
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 80/199 (40%), Positives = 114/199 (57%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D + + VR V ++ EL++ V D ++ LRD P C F ++DLCG+D+
Sbjct: 9 EALRDAVAAALGDKVRDIVLALDELTVTVSAADYLAAMQLLRDAPGCRFEQLMDLCGIDY 68
Query: 66 LSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ R+ VV H LS N+R+RVK+ + V S+ GI+ A+W+ERE +
Sbjct: 69 STYGDVGTEGPRYAVVSHLLSVSLNQRVRVKVFCPDDDFPVVASVSGIWNSANWYEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D+YGI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY PV +
Sbjct: 129 DLYGIVFDGHDDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDTEARRVVYEPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +E
Sbjct: 185 ------PREITPRIIREEK 197
>gi|91789114|ref|YP_550066.1| NADH (or F420H2) dehydrogenase subunit C [Polaromonas sp. JS666]
gi|123164660|sp|Q127X4|NUOC_POLSJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|91698339|gb|ABE45168.1| NADH dehydrogenase subunit C [Polaromonas sp. JS666]
Length = 203
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 113/198 (57%), Gaps = 18/198 (9%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
LGD I V+ ++GE+++ V D ++ LRD C F +IDLCG+D+
Sbjct: 11 QLGDTIAAVLGDKVKSLKIALGEVTVTVGAADYLASAVLLRDAAGCRFEQLIDLCGLDYS 70
Query: 67 SRSN------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWD 118
+ R+ V H LS N+R+R+K+ + V S+ G++ A+WFERE +D
Sbjct: 71 EYKDGQYDGLRYCVASHLLSVSLNQRVRLKVFCPDDDFPVVDSVNGVWNSANWFEREAFD 130
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
+YGI FEGH DLRRILTDYGF GHP RKDFP TG+VE+ YD + K+V+Y+PV +
Sbjct: 131 LYGIIFEGHNDLRRILTDYGFIGHPFRKDFPTTGYVEMRYDAEQKRVIYQPVTIE----- 185
Query: 179 YDFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 186 -----PREITPRVIREDN 198
>gi|222110088|ref|YP_002552352.1| NADH (or f420h2) dehydrogenase subunit c [Acidovorax ebreus TPSY]
gi|221729532|gb|ACM32352.1| NADH (or F420H2) dehydrogenase, subunit C [Acidovorax ebreus TPSY]
Length = 202
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 111/199 (55%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D + ++ VR ++ E+++ V + LRD P C F +IDLCGVD+
Sbjct: 9 ESLRDVVASALGDRVRQISVALDEVTVVVSAARYLEAMQILRDAPDCKFEQLIDLCGVDY 68
Query: 66 LSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ R+ VV H LS N+RLRVK+ ++ V S+ I+ A+WFERE +
Sbjct: 69 SAYGATGSEGPRYAVVSHLLSVSLNQRLRVKVFCSDDDFPIVASVTDIWNSANWFEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D++GI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD ++V+Y PV +
Sbjct: 129 DLFGIVFDGHNDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDADQRRVIYEPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 185 ------PREVTPRIIREDK 197
>gi|289065165|ref|YP_003434217.1| NADH dehydrogenase subunit 9 [Chattonella marina]
gi|288871877|dbj|BAI70564.1| NADH dehydrogenase subunit 9 [Chattonella marina]
Length = 186
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + I + + + + E+ + V L+ FL+ + + +
Sbjct: 1 MNQIIFNFAFSLQSLIP--IDNTKLFKNEVIISVPSKYLLESIYFLKFHTQSQYKILTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ RF++VY L+ YN RLRVK V E +PSI+ ++P ++W+EREVWD++
Sbjct: 59 SGVDYPQYQQRFEIVYDLLTLVYNNRLRVKTYVDEVTPLPSIISVFPCSNWWEREVWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE-LMQEHRDY 179
G+FF HPDLRRILTDYGFEGHPLRK+FP++G+VE+ YD+ K+VV P++ L QE R +
Sbjct: 119 GVFFLNHPDLRRILTDYGFEGHPLRKNFPLSGYVEVRYDESQKRVVCEPIKQLSQEFRSF 178
Query: 180 DFLSPWE 186
+F +PW+
Sbjct: 179 NFPTPWK 185
>gi|33592009|ref|NP_879653.1| NADH dehydrogenase subunit C [Bordetella pertussis Tohama I]
gi|161609262|ref|NP_890374.2| NADH dehydrogenase subunit C [Bordetella bronchiseptica RB50]
gi|81425362|sp|Q7VZQ3|NUOC_BORPE RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|33571653|emb|CAE41146.1| respiratory-chain NADH dehydrogenase, 30 kDa subunit [Bordetella
pertussis Tohama I]
gi|332381425|gb|AEE66272.1| NADH dehydrogenase subunit C [Bordetella pertussis CS]
Length = 207
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 27/211 (12%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + +F S+GEL+L+V S C+ LR DP F + IDL
Sbjct: 2 MMTRLETLKNNLQAAFGQD-LALTESLGELTLEVAAEQWFSACTKLRTDPALRFESCIDL 60
Query: 61 CGVDFLSRSN--------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVG 104
CGVD+L+ N R+ VV H LS ++N RLRV+ + V S++
Sbjct: 61 CGVDYLTWGNGTQPEEKTGPVTRGRYAVVVHLLSIEHNWRLRVRTWAPDDEFPMVSSLLE 120
Query: 105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
+PG +WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD + K+
Sbjct: 121 CWPGVNWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQKR 180
Query: 165 VVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
V+Y+PV + P E + ++
Sbjct: 181 VIYQPVTID----------PREITPRVVRED 201
>gi|121593379|ref|YP_985275.1| NADH (or F420H2) dehydrogenase subunit C [Acidovorax sp. JS42]
gi|218534270|sp|A1W4M4|NUOC_ACISJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|120605459|gb|ABM41199.1| NADH dehydrogenase subunit C [Acidovorax sp. JS42]
Length = 202
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 111/199 (55%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D + ++ VR ++ E+++ V + LRD P C F +IDLCGVD+
Sbjct: 9 ESLRDVVASALGDRVRQISVALDEVTVVVSAARYLEAMQILRDAPDCKFEQLIDLCGVDY 68
Query: 66 LSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ R+ VV H LS N+RLRVK+ ++ V S+ I+ A+WFERE +
Sbjct: 69 SAYGATGSEGPRYAVVSHLLSVSLNQRLRVKVFCSDDDFPIVASVTDIWNSANWFEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D++GI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD ++V+Y PV +
Sbjct: 129 DLFGIVFDGHNDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDADQRRVIYEPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 185 ------PREVTPRVIREDK 197
>gi|81429888|sp|Q7WCU1|NUOC_BORBR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|33577256|emb|CAE35813.1| respiratory-chain NADH dehydrogenase, 30 kDa subunit [Bordetella
bronchiseptica RB50]
Length = 215
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 27/211 (12%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + +F S+GEL+L+V S C+ LR DP F + IDL
Sbjct: 10 MMTRLETLKNNLQAAFGQD-LALTESLGELTLEVAAEQWFSACTKLRTDPALRFESCIDL 68
Query: 61 CGVDFLSRSN--------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVG 104
CGVD+L+ N R+ VV H LS ++N RLRV+ + V S++
Sbjct: 69 CGVDYLTWGNGTQPEEKTGPVTRGRYAVVVHLLSIEHNWRLRVRTWAPDDEFPMVSSLLE 128
Query: 105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
+PG +WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD + K+
Sbjct: 129 CWPGVNWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQKR 188
Query: 165 VVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
V+Y+PV + P E + ++
Sbjct: 189 VIYQPVTID----------PREITPRVVRED 209
>gi|264677200|ref|YP_003277106.1| NADH (or F420H2) dehydrogenase, subunit C [Comamonas testosteroni
CNB-2]
gi|262207712|gb|ACY31810.1| NADH (or F420H2) dehydrogenase, subunit C [Comamonas testosteroni
CNB-2]
Length = 203
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 80/199 (40%), Positives = 115/199 (57%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D + + VR + GE++++V + + LR+ P C F ++DLCGVD+
Sbjct: 9 EKLRDVVTAALGDRVRSVTLAYGEVTVEVSADKYLDVMQILRNAPDCQFEMLLDLCGVDY 68
Query: 66 LSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ RF VV H +S N+RLRV++ A+ V SI I+ A+WFERE +
Sbjct: 69 STYAEVGKDGPRFAVVSHLMSLTLNQRLRVRVYCADDDFPVVASINPIWNSANWFEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D++GI FEGH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY+PV +
Sbjct: 129 DLFGIVFEGHEDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDAEQQRVVYQPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 185 ------PREITPRIIREEN 197
>gi|319412294|gb|ADV41831.1| NADH dehydrogenase subunit 9 [Bigelowiella natans]
Length = 185
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 84/182 (46%), Positives = 116/182 (63%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ D + S S S+ +L +LV + F++ F ++ D+ D
Sbjct: 3 LKKYCDQLQTSLSLSLTEVSAKGWDLRAHTTASNLVGVLFFIKSSTSSLFNSLSDIAASD 62
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
F ++ RF++ Y+ LS KY RL +K+ V EG VPSI ++PGA+W ERE WD+ G+FF
Sbjct: 63 FPDKAERFELSYNLLSTKYGSRLLLKLTVGEGDVVPSITTLFPGANWMEREAWDLLGVFF 122
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
GHPDLRRILTDYGFEGHPLRKDFP+TG++E YD ++VY PVEL QE+RD+ F SP
Sbjct: 123 NGHPDLRRILTDYGFEGHPLRKDFPLTGYLEARYDVARARIVYEPVELAQEYRDFSFKSP 182
Query: 185 WE 186
W+
Sbjct: 183 WK 184
>gi|57239035|ref|YP_180171.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Welgevonden]
gi|58578976|ref|YP_197188.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Welgevonden]
gi|58617034|ref|YP_196233.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Gardel]
gi|57161114|emb|CAH58024.1| putative NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium
str. Welgevonden]
gi|58416646|emb|CAI27759.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Gardel]
gi|58417602|emb|CAI26806.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Welgevonden]
Length = 191
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 76/184 (41%), Positives = 111/184 (60%), Gaps = 2/184 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+E++ +I + V+ L D+ + FL +D C F +ID+
Sbjct: 6 NTLEEIMTHINTCLN--VKCIAQDSTTLEFYSTPQDIHNHILFLCNDRICKFQILIDIFI 63
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ R RF+++Y LS N R+ K+++ E +++ SI I+ A WFERE +DMYGI
Sbjct: 64 VDYPHREARFEIIYSLLSIANNIRIFCKVSLHENENITSITNIFNAAGWFEREAFDMYGI 123
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
F +PDLRRILTDYGF GHP+ KDFP++G+ E+ YD K+V+Y PV L Q+ R +DFL
Sbjct: 124 LFTNNPDLRRILTDYGFSGHPMLKDFPLSGYKEVRYDIAKKEVIYEPVNLQQDFRSFDFL 183
Query: 183 SPWE 186
SPW+
Sbjct: 184 SPWK 187
>gi|58584501|ref|YP_198074.1| NADH:ubiquinone oxidoreductase chain C [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|75507999|sp|Q5GT42|NUOC_WOLTR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|58418817|gb|AAW70832.1| NADH:ubiquinone oxidoreductase chain C [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 190
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 83/183 (45%), Positives = 115/183 (62%), Gaps = 2/183 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ YI F G + + ++ FLRDD C F ++D+ GVD
Sbjct: 1 MDKTAKYIQKK--TKCEFIQQGDGTIVIYSTLDNIEDHLLFLRDDEKCRFELLVDIFGVD 58
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ R RF+++Y+ LS +N R+ +K+ + E PS+V I+ A WFEREV+DMYGI F
Sbjct: 59 YPDREKRFELIYNLLSIVHNIRVHIKLQLYEDDMPPSVVRIFNTASWFEREVFDMYGIEF 118
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
HPDLRRILTDYGF+GHP+ KDFP+TG+ E+ YD + KKVVY P++L Q+ R +D LSP
Sbjct: 119 SNHPDLRRILTDYGFKGHPMLKDFPLTGYEEVRYDIEAKKVVYNPIDLPQDFRMFDSLSP 178
Query: 185 WEG 187
WEG
Sbjct: 179 WEG 181
>gi|268164098|ref|YP_003288875.1| NADH dehydrogenase subunit 9 [Saccharina coriacea]
gi|262318408|dbj|BAI48727.1| NADH dehydrogenase subunit 9 [Saccharina coriacea]
Length = 190
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + V+ E+ + V L++ +FL + F + +
Sbjct: 1 MFSSLIVYATSLTRLVP--VQTFQVFGHEIVISVSKKYLLATLTFLHHHSNGNFQMLTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RF+VVY L+ + N RLR+K E +PS+V ++P A+W+ERE+WD++
Sbjct: 59 SGVDYPEREERFEVVYDLLNVRSNCRLRIKTHTDEINPLPSVVSLFPSANWWEREIWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGFEGHPLRKDFP++G+ EL YD+ + VV +EL QE R ++
Sbjct: 119 GVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFN 178
Query: 181 FLSPWEGVNSL 191
F PW N +
Sbjct: 179 FHVPWSQNNLI 189
>gi|317401990|gb|EFV82590.1| NADH dehydrogenase subunit I [Achromobacter xylosoxidans C54]
Length = 208
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 29/213 (13%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + + + ++GEL+L+V S+C+ LR + F IDL
Sbjct: 1 MMTRLETLKNNLQTTLGADI-ALTEALGELTLEVPAEQWFSVCNKLRTEAGLRFEICIDL 59
Query: 61 CGVDFLSRSN----------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSI 102
CGVD+L+ N RF VV H LS + N RLRV+ + V S+
Sbjct: 60 CGVDYLTWGNGTRQLPEEANAKVHRARFAVVAHLLSVENNWRLRVRTWAPDDEFPMVASL 119
Query: 103 VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ +P WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD +
Sbjct: 120 MECWPAVGWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQ 179
Query: 163 KKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
K+V+Y+PV + P E + ++
Sbjct: 180 KRVIYQPVTID----------PREITPRVVRED 202
>gi|10802934|gb|AAG23682.1|AF288091_27 NADH dehydrogenase subunit 9 [Thraustochytrium aureum]
Length = 194
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
++ S+ + L + L+ + FL +C + + D+ VD+
Sbjct: 4 YSKWLQKMLGKSLISVKIETNSIFLSIKKEKLLEVLVFLAKHTNCNYTILSDITVVDYPK 63
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+NRF+++Y+ LS N RL VKI VPS+V ++ A+W+ERE +D++GIFF GH
Sbjct: 64 NNNRFEIIYNLLSLTNNHRLFVKIQTNSNWFVPSMVTLFSNANWYEREAFDIFGIFFSGH 123
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY-DFL 182
PDLRRILTDYGFEGHPLRKDFP+ GF E+ +D + K+V+ P+E+ QE R+Y DF
Sbjct: 124 PDLRRILTDYGFEGHPLRKDFPLNGFNEVRFDFEKKRVICEPLEISQEFRNYKDFS 179
>gi|2499321|sp|Q34011|NDUS3_BETWE RecName: Full=NADH-ubiquinone oxidoreductase 27 kDa subunit;
AltName: Full=Complex I-27kD; Short=CI-27kD; AltName:
Full=NADH dehydrogenase subunit 9
Length = 192
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 115/175 (65%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + F +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+R++ + E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRLQTSADEVTRISSVVRLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|21450013|ref|NP_659275.1| NADH dehydrogenase subunit 9 [Laminaria digitata]
gi|21425338|emb|CAC87971.1| NADH dehydrogenase subunit 9 [Laminaria digitata]
Length = 190
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + V+ E+ + V L++ +FL + F + +
Sbjct: 1 MFSSLIVYATSLTRLVP--VQTFQVFGHEIVISVSKKYLLATLTFLHHHSNGNFQMLTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RF++VY L+ + N RLR+K E +PS+V ++P A+W+ERE+WD++
Sbjct: 59 SGVDYPEREERFEIVYDLLNIRSNCRLRIKTHTDEINPLPSVVSLFPSANWWEREIWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGFEGHPLRKDFP++G+ EL YD+ + VV +EL QE R ++
Sbjct: 119 GVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFN 178
Query: 181 FLSPWEGVNSL 191
F PW N +
Sbjct: 179 FHVPWSQNNLI 189
>gi|161610381|ref|NP_885552.2| NADH dehydrogenase subunit C [Bordetella parapertussis 12822]
Length = 207
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 120/210 (57%), Gaps = 27/210 (12%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + +F S+GEL+L+V S C+ LR DP F + IDL
Sbjct: 2 MMTRLETLKNNLQAAFGQD-LALTESLGELTLEVAAEQWFSACTKLRTDPALRFESCIDL 60
Query: 61 CGVDFLSRSN--------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVG 104
CGVD+L+ N R+ VV H LS ++N RLRV+ + V S++
Sbjct: 61 CGVDYLTWGNGTQPEEKTGPVTHGRYAVVVHLLSIEHNWRLRVRTWAPDDEFPMVSSLLE 120
Query: 105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
+PG +WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD + K+
Sbjct: 121 CWPGVNWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQKR 180
Query: 165 VVYRPVELMQEHRDYDFLSPWEGVNSLFAK 194
V+Y+PV + P E + +
Sbjct: 181 VIYQPVTID----------PREITPRVVRE 200
>gi|319761764|ref|YP_004125701.1| NADH (or f420h2) dehydrogenase, subunit c [Alicycliphilus
denitrificans BC]
gi|330826544|ref|YP_004389847.1| NADH (or F420H2) dehydrogenase subunit C [Alicycliphilus
denitrificans K601]
gi|317116325|gb|ADU98813.1| NADH (or F420H2) dehydrogenase, subunit C [Alicycliphilus
denitrificans BC]
gi|329311916|gb|AEB86331.1| NADH (or F420H2) dehydrogenase, subunit C [Alicycliphilus
denitrificans K601]
Length = 202
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D + + +R ++GE+++ V D ++ LRD P C F +IDLCGVD+
Sbjct: 9 EKLRDAVAGALGDKLREIRLALGEVTVVVAAEDYLAAMEILRDAPQCRFEQLIDLCGVDY 68
Query: 66 LSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ R+ VV H LS N+RLRVK+ + +PS+ GI+ GA+WFERE +
Sbjct: 69 STYGEVGTDGPRYAVVTHLLSLSLNQRLRVKVFCPDDDFPVIPSVTGIWNGANWFEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D+YGI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY PV +
Sbjct: 129 DLYGIVFDGHNDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDAEQRRVVYEPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 185 ------PREITPRIIREDN 197
>gi|296040731|gb|ADG85333.1| NADH dehydrogenase subunit 9 [Silene noctiflora]
Length = 192
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 89/183 (48%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
Query: 8 LGDYIVNSFSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L Y + + V+ S D L L FLR + F +ID+CGVD+
Sbjct: 6 LFKYSLETLPKSWVKRLEKSEHGTRFDTTPAFLFQLLCFLRLHTYTRFEVLIDICGVDYP 65
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
SR RF+VVY+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F
Sbjct: 66 SRQVRFEVVYNLLSTRYNSRIRVQSSADEVTRISSVVSLFPSAGWWEREVWDMFGLSFIN 125
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 126 HPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWE 185
Query: 187 GVN 189
Sbjct: 186 QGK 188
>gi|187477543|ref|YP_785567.1| NADH dehydrogenase subunit C [Bordetella avium 197N]
gi|123513816|sp|Q2KV11|NUOC_BORA1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|115422129|emb|CAJ48653.1| NADH dehydrogenase I chain C [Bordetella avium 197N]
Length = 206
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 27/210 (12%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + + + ++GEL+L+V +++C+ LR D F + IDL
Sbjct: 1 MMTRLETLKNNLQATLGQDI-ALTEALGELTLEVPADQWLTVCNKLRTDAGLRFESCIDL 59
Query: 61 CGVDFLSRSN--------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVG 104
CG+D+ + + RF VV H LS ++N RLRV+ + V S++
Sbjct: 60 CGMDYQTWGDGSHANAHDEPARPGRFAVVIHLLSIEHNWRLRVRTYAVDEEFPIVASLIE 119
Query: 105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
+PG +W+ERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD + K+
Sbjct: 120 CWPGVNWYEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQKR 179
Query: 165 VVYRPVELMQEHRDYDFLSPWEGVNSLFAK 194
V+Y+PV + P E + +
Sbjct: 180 VIYQPVTID----------PREITPRIVRE 199
>gi|257095317|ref|YP_003168958.1| NADH (or F420H2) dehydrogenase subunit C [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047841|gb|ACV37029.1| NADH (or F420H2) dehydrogenase, subunit C [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 202
Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+E L + V+ ++GE++++VD D +++ LRD+P F +IDLC
Sbjct: 3 SATLEALSHTLQEHLGDRVKSLKVALGEVTVEVDAADYLAVMQTLRDEPALSFEELIDLC 62
Query: 62 GVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFE 113
GVD+ RF V H +S N RLRV+ + PS+ G++ ADWFE
Sbjct: 63 GVDYSTYANAPRAGRRFAAVSHLISITRNWRLRVRCFAPDDDFPSVPSVTGVWNVADWFE 122
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D++GI F GH DLRRILTDYGF GHP RKDFP++G+VE+ YD ++V+Y+PV +
Sbjct: 123 REAFDLFGIVFPGHLDLRRILTDYGFIGHPFRKDFPISGYVEMRYDPDQQRVIYQPVTIE 182
>gi|134095029|ref|YP_001100104.1| putative NADH-quinone oxidoreductase chain C [Herminiimonas
arsenicoxydans]
gi|218534292|sp|A4G642|NUOC_HERAR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|133738932|emb|CAL61979.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
(NDH-1, chain C) [Herminiimonas arsenicoxydans]
Length = 198
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + N+ ++ ++GE+++ V+ D S LRD F +IDL
Sbjct: 1 MTIKLELLESALRNALGDQLQSLTLALGEITIVVNSRDYASAMRVLRDHADLRFEELIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ + + VV H LS +N R+RV++ ++ + S+ I+P A+W+
Sbjct: 61 CGVDYSTYGDGAWDGQRFAVVSHLLSITHNWRVRVRVFASDDEMPVVASMTEIWPAANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D +GI FEGH DLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+V+Y+PV +
Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E V + +E
Sbjct: 181 D----------PRENVPRVIREEQ 194
>gi|160900610|ref|YP_001566192.1| NADH (or F420H2) dehydrogenase subunit C [Delftia acidovorans
SPH-1]
gi|218534269|sp|A9BNB2|NUOC_DELAS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|160366194|gb|ABX37807.1| NADH (or F420H2) dehydrogenase, subunit C [Delftia acidovorans
SPH-1]
Length = 203
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 22/208 (10%)
Query: 1 MVRKI----EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M+ I E L D + + R ++GE++++V + L P C F
Sbjct: 1 MMTAIAIHPEVLRDVVAAALGDKARSVTVALGEVTVEVSAAQYLEAMQVLHTAPDCRFEV 60
Query: 57 IIDLCGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPG 108
++DLCGVD+ + RF VV H LS N+RLRV++ + V S+ ++ G
Sbjct: 61 LVDLCGVDYSTYAEVGREGPRFAVVSHLLSISLNQRLRVRVFCTDDDFPVVASVTSVWAG 120
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
A+WFERE +D++GI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY+
Sbjct: 121 ANWFEREAFDLFGIVFDGHDDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDPEQQRVVYQ 180
Query: 169 PVELMQEHRDYDFLSPWEGVNSLFAKED 196
PV + P E + +++
Sbjct: 181 PVTIE----------PREITPRIIREDN 198
>gi|268053554|ref|YP_003288913.1| NADH dehydrogenase subunit 9 [Saccharina japonica]
gi|268053593|ref|YP_003288951.1| NADH dehydrogenase subunit 9 [Saccharina religiosa]
gi|268053632|ref|YP_003288989.1| NADH dehydrogenase subunit 9 [Saccharina ochotensis]
gi|268053671|ref|YP_003289066.1| NADH dehydrogenase subunit 9 [Saccharina diabolica]
gi|268053710|ref|YP_003289117.1| NADH dehydrogenase subunit 9 [Saccharina longipedalis]
gi|268164059|ref|YP_003288824.1| NADH dehydrogenase subunit 9 [Saccharina angustata]
gi|262318174|dbj|BAI48499.1| NADH dehydrogenase subunit 9 [Saccharina japonica]
gi|262318213|dbj|BAI48537.1| NADH dehydrogenase subunit 9 [Saccharina religiosa]
gi|262318252|dbj|BAI48575.1| NADH dehydrogenase subunit 9 [Saccharina ochotensis]
gi|262318291|dbj|BAI48613.1| NADH dehydrogenase subunit 9 [Saccharina diabolica]
gi|262318330|dbj|BAI48651.1| NADH dehydrogenase subunit 9 [Saccharina longipedalis]
gi|262318369|dbj|BAI48689.1| NADH dehydrogenase subunit 9 [Saccharina angustata]
Length = 190
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + V+ E+ + V L++ +FL + F + +
Sbjct: 1 MFSSLIVYATSLTRLVP--VQTFQVFGHEIVISVSKKYLLATLTFLHHHSNGNFQMLTSI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ R RF++VY L+ + N RLR+K E +PS+V ++P A+W+ERE+WD++
Sbjct: 59 SGVDYPEREERFEIVYDLLNVRSNCRLRIKTHTDEINPLPSVVSLFPSANWWEREIWDLF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G+FF HPDLRRILTDYGFEGHPLRKDFP++G+ EL YD+ + VV +EL QE R ++
Sbjct: 119 GVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFN 178
Query: 181 FLSPWEGVNSL 191
F PW N +
Sbjct: 179 FHVPWSQNNLI 189
>gi|81426433|sp|Q7W5A9|NUOC_BORPA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|33574338|emb|CAE38674.1| respiratory-chain NADH dehydrogenase, 30 kDa subunit [Bordetella
parapertussis]
Length = 215
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 120/210 (57%), Gaps = 27/210 (12%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + +F S+GEL+L+V S C+ LR DP F + IDL
Sbjct: 10 MMTRLETLKNNLQAAFGQD-LALTESLGELTLEVAAEQWFSACTKLRTDPALRFESCIDL 68
Query: 61 CGVDFLSRSN--------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVG 104
CGVD+L+ N R+ VV H LS ++N RLRV+ + V S++
Sbjct: 69 CGVDYLTWGNGTQPEEKTGPVTHGRYAVVVHLLSIEHNWRLRVRTWAPDDEFPMVSSLLE 128
Query: 105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
+PG +WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD + K+
Sbjct: 129 CWPGVNWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQKR 188
Query: 165 VVYRPVELMQEHRDYDFLSPWEGVNSLFAK 194
V+Y+PV + P E + +
Sbjct: 189 VIYQPVTID----------PREITPRVVRE 208
>gi|320148013|emb|CBJ20679.1| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. maritima]
Length = 206
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V D + L L FL+ + F +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVTKIEKLEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ E + +V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRVQTCADEVTRISLVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQELRYFDFASPWEQ 186
>gi|293603921|ref|ZP_06686336.1| NADH-quinone oxidoreductase subunit C [Achromobacter piechaudii
ATCC 43553]
gi|292817758|gb|EFF76824.1| NADH-quinone oxidoreductase subunit C [Achromobacter piechaudii
ATCC 43553]
Length = 208
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 119/213 (55%), Gaps = 29/213 (13%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + + + ++GEL+L+V ++C+ LR + F IDL
Sbjct: 1 MMTRLESLKNNLQTTLGADI-ALTEALGELTLEVPAQQWFAVCNKLRTEAGLRFETCIDL 59
Query: 61 CGVDFLSRSN----------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSI 102
CGVD+L+ N RF VV H LS ++N RLRV+ A+ V S+
Sbjct: 60 CGVDYLTWGNGTRQLPEEPGAKVHRARFAVVIHLLSIEHNWRLRVRTWAADDEFPIVASL 119
Query: 103 VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ +P WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD +
Sbjct: 120 MECWPAVGWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQ 179
Query: 163 KKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
++V+Y+PV + P E + ++
Sbjct: 180 RRVIYQPVTID----------PREITPRVVRED 202
>gi|311247861|ref|XP_003122850.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial-like isoform 2 [Sus scrofa]
Length = 234
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 84/197 (42%), Positives = 111/197 (56%), Gaps = 30/197 (15%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ G Y+ V+ F ++ DL
Sbjct: 56 KQLSAFGQYVAEILPKYVQQV-----------------------------QFKSLADLTA 86
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD +R NRF++VY+ LS ++N R+RVK E + S V +Y A+W+ERE+WDM+G+
Sbjct: 87 VDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVTVYKAANWYEREIWDMFGV 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
FF HPDLRRILTDYGFEGHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D
Sbjct: 147 FFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLN 206
Query: 183 SPWEGVN-SLFAKEDSK 198
SPWE ED K
Sbjct: 207 SPWEAFPAYRQPPEDLK 223
>gi|218673425|ref|ZP_03523094.1| NADH dehydrogenase subunit C [Rhizobium etli GR56]
Length = 169
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 93/161 (57%), Positives = 112/161 (69%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L Y+ + + + GEL+L +L++L +FLRDD C FVN+ID+
Sbjct: 1 MSEALTELASYLGEARGNLIAASQLKYGELTLTTTGENLIALLTFLRDDAKCGFVNLIDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD+ R RFDVVYH LSPK N R+RVK+A E VPS +YPGADWFERE WDMY
Sbjct: 61 CGVDWPQRELRFDVVYHLLSPKQNLRVRVKVATDEDTPVPSACAVYPGADWFERETWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
G+ F GHPDLRRILTDYGFE HPLRKDFP TGFVE+ YDD
Sbjct: 121 GVLFTGHPDLRRILTDYGFESHPLRKDFPTTGFVEVRYDDA 161
>gi|253996971|ref|YP_003049035.1| NADH (or F420H2) dehydrogenase subunit C [Methylotenera mobilis
JLW8]
gi|253983650|gb|ACT48508.1| NADH (or F420H2) dehydrogenase, subunit C [Methylotenera mobilis
JLW8]
Length = 198
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K++ L + + ++ E++++ D +++C LRDD F +IDL
Sbjct: 1 MSAKLDQLLASLQTVLGEKITKQTVALDEVTIECRAEDYLAVCELLRDDTALKFEQLIDL 60
Query: 61 CGVDFLSRSN------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ R+ VV HFLS N+RLR+++ + + ++VG++P A+WF
Sbjct: 61 CGVDYQEYGEGSYDGLRYAVVCHFLSVSLNQRLRLRVFAKDEDFPILSTLVGLWPVANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FE HPDLRR+LTDYGF GHP RKDFP+ G VE+ YD + ++V+Y+PV +
Sbjct: 121 EREAFDLYGILFENHPDLRRLLTDYGFVGHPFRKDFPMIGNVEMRYDPEQQRVIYQPVSI 180
Query: 173 MQEHRD 178
E R+
Sbjct: 181 --ELRN 184
>gi|194033258|ref|YP_002000595.1| NADH dehydrogenase subunit 9 [Oryza sativa Japonica Group]
gi|60498753|dbj|BAC19900.2| NADH dehydrogenase subunit 9 [Oryza sativa Japonica Group]
Length = 190
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 82/156 (52%), Positives = 109/156 (69%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ L L FL+ + +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+
Sbjct: 31 FYTNTDYLFPLLCFLKWHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT 90
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + S+V ++P A W+EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 91 SADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLS 150
Query: 152 GFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 151 GYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|218460351|ref|ZP_03500442.1| NADH dehydrogenase subunit C [Rhizobium etli Kim 5]
Length = 133
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 99/129 (76%)
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
RFDVVYH LSPK N R+RVK+A E VPS +YPGADWFERE WDMYG+ F GHPDL
Sbjct: 4 RFDVVYHLLSPKQNLRIRVKVATDEDTPVPSACAVYPGADWFERETWDMYGVLFTGHPDL 63
Query: 131 RRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNS 190
RRILTDYGFEGHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++DF+SPWEG
Sbjct: 64 RRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFMSPWEGTEY 123
Query: 191 LFAKEDSKD 199
+ ++
Sbjct: 124 VLPGDEKAK 132
>gi|57337517|emb|CAI23792.1| NADH dehydrogenase, subunit 9 [Zea mays]
Length = 190
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/156 (52%), Positives = 109/156 (69%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ L L FL+ + +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+
Sbjct: 31 FYTNTDYLFPLLCFLKWHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT 90
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + S+V ++P A W+EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 91 SADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLS 150
Query: 152 GFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 151 GYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|190571253|ref|YP_001975611.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018651|ref|ZP_03334459.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357525|emb|CAQ54962.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995602|gb|EEB56242.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 191
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/182 (43%), Positives = 113/182 (62%), Gaps = 2/182 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ YI + G + + D+ + FLRDD C ++D+ GVD
Sbjct: 1 MDKTAKYIQKK--TKCECIQKNDGTIVIYSALNDIENHLLFLRDDEKCRLELLVDVFGVD 58
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ R RF+++Y+ LS +N R+ +K+ + EG S+ I+ A WFEREV+DMYGI F
Sbjct: 59 YPDREKRFELIYNLLSVVHNIRVHIKLQLCEGDIPLSVAKIFNAASWFEREVFDMYGIEF 118
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
HPDLRRILTDYGF+GHP+ KDFP+TG+ E+ YD + KKVVY P++L Q+ R +D LSP
Sbjct: 119 SDHPDLRRILTDYGFKGHPMLKDFPLTGYEEVRYDIEAKKVVYNPIDLPQDFRMFDSLSP 178
Query: 185 WE 186
WE
Sbjct: 179 WE 180
>gi|298370382|ref|ZP_06981698.1| NADH dehydrogenase (ubiquinone), C subunit [Neisseria sp. oral
taxon 014 str. F0314]
gi|298281842|gb|EFI23331.1| NADH dehydrogenase (ubiquinone), C subunit [Neisseria sp. oral
taxon 014 str. F0314]
Length = 261
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L D + ++++GE++++ VS+ + LRD F ++DLC
Sbjct: 65 MASIQNLYDTVSRVLGNQASKVISALGEITVECLPEHYVSVMTTLRDHEELHFELLVDLC 124
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V +Y ADW+E
Sbjct: 125 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVPVYNSADWYE 184
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 185 REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 244
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 245 ----------PREITPRIVREEN 257
>gi|150421605|sp|Q35322|NDUS3_ORYSJ RecName: Full=NADH-ubiquinone oxidoreductase 27 kDa subunit;
AltName: Full=Complex I-27kD; Short=CI-27kD; AltName:
Full=NADH dehydrogenase subunit 9
Length = 190
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 82/156 (52%), Positives = 109/156 (69%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ L L FL+ + +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+
Sbjct: 31 FYTNTDYLFPLLCFLKWHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT 90
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + S+V ++P A W+EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 91 SADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLS 150
Query: 152 GFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 151 GYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|316996027|dbj|BAD83545.2| NADH dehydrogenase subunit 9 [Nicotiana tabacum]
Length = 190
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKQRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSIRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|295311696|ref|YP_003587378.1| NADH dehydrogenase subunit 9 [Cucurbita pepo]
gi|259156824|gb|ACV96685.1| NADH dehydrogenase subunit 9 [Cucurbita pepo]
Length = 190
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 86/175 (49%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S LD + L L FL+ + +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKRERSEHGNRLDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
VVY+ LS +YN R+RV+ E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 AVVYNLLSTRYNSRIRVQTRADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|124266598|ref|YP_001020602.1| NADH dehydrogenase (quinone) [Methylibium petroleiphilum PM1]
gi|218534299|sp|A2SFM8|NUOC_METPP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|124259373|gb|ABM94367.1| NADH dehydrogenase (quinone) [Methylibium petroleiphilum PM1]
Length = 203
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 118/208 (56%), Gaps = 22/208 (10%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M KI+ L + + +G ++ V GEL+L V D +++C+ LRD +IDL
Sbjct: 1 MDHKIDLLQPALEAALAGKIQALVRDRGELTLTVTAADYLAVCTTLRDHAELKLEQLIDL 60
Query: 61 CGVDFLSRS----------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPG 108
CG+D+ S R+ VV H LS N RLR+K+ A+ VPS+ I+
Sbjct: 61 CGLDYSSYKDGAGSPYTEGPRYCVVLHLLSVSKNWRLRLKVFCADDGLPVVPSVNEIWAA 120
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
A+WFERE +D+YGI FEGH DLRRILTDYGF GHP RKDFP TG VE+ YD + ++V+Y+
Sbjct: 121 ANWFEREAFDLYGIVFEGHADLRRILTDYGFIGHPFRKDFPTTGHVEMRYDAEQRRVIYQ 180
Query: 169 PVELMQEHRDYDFLSPWEGVNSLFAKED 196
PV + P E + +++
Sbjct: 181 PVTIE----------PREITPRIIREDN 198
>gi|73666916|ref|YP_302932.1| NADH (or F420H2) dehydrogenase, subunit C [Ehrlichia canis str.
Jake]
gi|72394057|gb|AAZ68334.1| NADH dehydrogenase subunit C [Ehrlichia canis str. Jake]
Length = 192
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 86/193 (44%), Positives = 121/193 (62%), Gaps = 5/193 (2%)
Query: 1 MVRK---IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M I+++ +I S + V+ + L L+ + D+ S FLR+D C F +
Sbjct: 1 MSDNNNAIDNIIAHINTSIN--VKCTIKDSINLELNSNVNDIYSHILFLRNDTKCKFHIL 58
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVW 117
ID+ +D+ SR RF+VVY LS N R+ K+ + E +S+PSI ++ A WFEREV+
Sbjct: 59 IDIFAIDYPSRPARFEVVYSLLSIINNIRIFCKVPLQENESIPSITNLFSAAGWFEREVF 118
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DMYGI F +PDLRRILTDYGF GHP+ KDFP+TG+ E+ YD K+V Y V L Q+ R
Sbjct: 119 DMYGIIFANNPDLRRILTDYGFSGHPMLKDFPLTGYKEVRYDILKKEVTYEAVNLQQDFR 178
Query: 178 DYDFLSPWEGVNS 190
+DFLSPW+ V++
Sbjct: 179 SFDFLSPWKEVSN 191
>gi|311104660|ref|YP_003977513.1| NADH-quinone oxidoreductase subunit C [Achromobacter xylosoxidans
A8]
gi|310759349|gb|ADP14798.1| NADH-quinone oxidoreductase subunit C [Achromobacter xylosoxidans
A8]
Length = 208
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 118/213 (55%), Gaps = 29/213 (13%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L + + + + ++GEL+L+V S+C+ LR + F IDL
Sbjct: 1 MMTRLETLKNNLQTTLGADI-ALTEALGELTLEVPAQQWFSVCNKLRTEAGLRFETCIDL 59
Query: 61 CGVDFLSRSN----------------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSI 102
CGVD+L+ N RF VV H +S ++N RLRV+ + V S+
Sbjct: 60 CGVDYLTWGNGTRQMPEETAAKIHRARFAVVVHLVSIEHNWRLRVRTWAEDDEFPMVASL 119
Query: 103 VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ +P WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD +
Sbjct: 120 MECWPTVGWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEMRYDPEQ 179
Query: 163 KKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
++V+Y+PV + P E + ++
Sbjct: 180 RRVIYQPVTID----------PREITPRVVRED 202
>gi|152980703|ref|YP_001353154.1| NADH dehydrogenase I chain C [Janthinobacterium sp. Marseille]
gi|218534294|sp|A6SY07|NUOC_JANMA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|151280780|gb|ABR89190.1| NADH dehydrogenase I chain C [Janthinobacterium sp. Marseille]
Length = 198
Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 118/204 (57%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + N+ ++ ++GE+++ V D S LRD F +IDL
Sbjct: 1 MTIKLELLEAALRNALGDQLQSLTQALGEVTIVVKSHDYASAMRVLRDHADLRFEEMIDL 60
Query: 61 CGVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWF 112
CGVD+ L RF VV H LS K+N R+RV++ A+ + S++ I+ A+W+
Sbjct: 61 CGVDYSTYGDGLWEGPRFAVVSHLLSIKHNWRVRVRVFAADDEMPVVASMIDIWATANWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D +GI FEGH DLRRILTDYGF GHP RKDFPV+G+VE+ YD + K+V+Y+PV +
Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E V + +E
Sbjct: 181 D----------PRENVPRVIREEQ 194
>gi|68171627|ref|ZP_00544994.1| NADH (or F420H2) dehydrogenase, subunit C [Ehrlichia chaffeensis
str. Sapulpa]
gi|88658220|ref|YP_507586.1| NADH dehydrogenase I, C subunit [Ehrlichia chaffeensis str.
Arkansas]
gi|67998948|gb|EAM85632.1| NADH (or F420H2) dehydrogenase, subunit C [Ehrlichia chaffeensis
str. Sapulpa]
gi|88599677|gb|ABD45146.1| NADH dehydrogenase I, C subunit [Ehrlichia chaffeensis str.
Arkansas]
Length = 192
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 83/189 (43%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
I+++ YI S + V + L L D ++ + SFLR D C F ++D+
Sbjct: 5 NNAIDNISTYINTSIN--VECVIKDNITLELHSDVQNIYNHISFLRTDTKCKFHILVDIF 62
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
+D+ +R RF+V+Y LS N R+ K+ + E +S+PSI I+ A WFEREV+DMYG
Sbjct: 63 AIDYPTRLARFEVIYSLLSIINNIRVSCKVPLQENESIPSITNIFSAAGWFEREVFDMYG 122
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
I F +PDLRRILTDYGF GHP+ KDFP+TG+ E+ YD K+V Y V L Q+ R +DF
Sbjct: 123 IIFANNPDLRRILTDYGFSGHPMLKDFPLTGYKEVRYDISKKEVAYENVNLQQDFRSFDF 182
Query: 182 LSPWEGVNS 190
LSPW+ + +
Sbjct: 183 LSPWKELKN 191
>gi|9280616|gb|AAF86496.1|AF279449_1 NADH dehydrogenase subunit 9 [Lupinus angustifolius]
Length = 190
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V S D + L L FL+ + +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVNKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ + E + +V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|112253858|ref|YP_717114.1| NADH dehydrogenase subunit 9 [Brassica napus]
gi|37591060|dbj|BAC98862.1| NADH dehydrogenase subunit 9 [Brassica napus]
gi|80978902|gb|ABB54700.1| NADH dehydrogenase subunit 9 [Brassica oleracea var. botrytis]
Length = 190
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|58698297|ref|ZP_00373214.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630973|ref|YP_002727764.1| NADH dehydrogenase I, C subunit [Wolbachia sp. wRi]
gi|58535170|gb|EAL59252.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592954|gb|ACN95973.1| NADH dehydrogenase I, C subunit [Wolbachia sp. wRi]
Length = 190
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ YI G + + ++ FLRDD C F ++D+ GVD
Sbjct: 1 MDKTAKYIQKK--TKCECIQKDDGIIVIYSTLDEIEKHLFFLRDDEKCRFELLVDIFGVD 58
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ +R RF+++Y+ LS +N R+ +K+ + E PS+ I+ A WFEREV+DMYGI F
Sbjct: 59 YPNREKRFELIYNLLSIVHNIRVHIKLQLCESDMPPSVAKIFSTALWFEREVFDMYGIEF 118
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
HPDLRRILTDYGF+GHP+ KDFP+TG+ E+ YD + KKVVY P++L Q+ R +D LSP
Sbjct: 119 SDHPDLRRILTDYGFKGHPMLKDFPLTGYEEVRYDIETKKVVYNPIDLPQDFRMFDSLSP 178
Query: 185 WEG 187
WEG
Sbjct: 179 WEG 181
>gi|295311653|ref|YP_003587251.1| NADH dehydrogenase subunit 9 [Citrullus lanatus]
gi|259156781|gb|ACV96643.1| NADH dehydrogenase subunit 9 [Citrullus lanatus]
Length = 190
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 86/171 (50%), Positives = 114/171 (66%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY 76
V+ S LD + L L FL+ + +ID+CGVD+ SR RF+VVY
Sbjct: 16 KKWVKKRERSEHGNRLDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRFEVVY 75
Query: 77 HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F HPDLRRILTD
Sbjct: 76 NLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTD 135
Query: 137 YGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
YGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 136 YGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|9280612|gb|AAF86494.1|AF279447_1 NADH dehydrogenase subunit 9 [Lupinus luteus]
gi|9280614|gb|AAF86495.1|AF279448_1 NADH dehydrogenase subunit 9 [Lupinus angustifolius]
Length = 190
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V S D + L L FL+ + +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVNKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|332285015|ref|YP_004416926.1| NADH dehydrogenase I chain C [Pusillimonas sp. T7-7]
gi|330428968|gb|AEC20302.1| NADH dehydrogenase I chain C [Pusillimonas sp. T7-7]
Length = 203
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 120/208 (57%), Gaps = 25/208 (12%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++E L + +F S ++ EL+L+V + V LC+ LRDD F IDLC
Sbjct: 1 MTRLETLHTNLQAAFGESAT-LKLALNELTLEVPAKNWVDLCTALRDDAKLGFDTCIDLC 59
Query: 62 GVDFLSRS------------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYP 107
G+D+ + RF VV H LS K+N RLRV++ V +PS+V ++P
Sbjct: 60 GMDYSAWGAPTYPAAASMHPQRFAVVLHLLSVKHNWRLRVRVYVPNDEFPVIPSLVNVWP 119
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVY 167
+WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+ YD + K+VVY
Sbjct: 120 AVNWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGNVEMRYDTEQKRVVY 179
Query: 168 RPVELMQEHRDYDFLSPWEGVNSLFAKE 195
+PV + P E + +E
Sbjct: 180 QPVTIE----------PREITPRVVREE 197
>gi|56478178|ref|YP_159767.1| NADH dehydrogenase subunit C [Aromatoleum aromaticum EbN1]
gi|81356985|sp|Q5P1E8|NUOC_AZOSE RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|56314221|emb|CAI08866.1| NADH dehydrogenase I, chain C [Aromatoleum aromaticum EbN1]
Length = 201
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 113/204 (55%), Gaps = 18/204 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E L + N VR V GE++L+V D ++ LRD F +IDL
Sbjct: 1 MSSKLERLSSSLQNILGAKVRSVVVDRGEVTLEVAAADYLAAAQMLRDHRDLRFEELIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
G+D+ + N V H LS +N R+R++ + S+VG++PG +W+
Sbjct: 61 TGLDYSAYGNGAWTGKRFAVAVHLLSLTHNWRIRLRAFADDDAFPMFESLVGVWPGVNWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YG+ F GHPDLRRILTDYGF GHP RKDFPV+G+VE+ YD + +VVY+PV +
Sbjct: 121 EREAFDLYGLMFAGHPDLRRILTDYGFVGHPFRKDFPVSGYVEMRYDPEQGRVVYQPVTI 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 E----------PRENTPRIVREEN 194
>gi|254805715|ref|YP_003083936.1| NADH dehydrogenase I chain C [Neisseria meningitidis alpha14]
gi|304389068|ref|ZP_07371112.1| NADH-quinone oxidoreductase subunit C [Neisseria meningitidis ATCC
13091]
gi|254669257|emb|CBA08151.1| NADH dehydrogenase I chain C [Neisseria meningitidis alpha14]
gi|304336941|gb|EFM03131.1| NADH-quinone oxidoreductase subunit C [Neisseria meningitidis ATCC
13091]
Length = 197
Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|218767067|ref|YP_002341579.1| NADH dehydrogenase subunit C [Neisseria meningitidis Z2491]
gi|241760669|ref|ZP_04758761.1| NADH-quinone oxidoreductase, c subunit [Neisseria flavescens SK114]
gi|261379578|ref|ZP_05984151.1| NADH dehydrogenase, C subunit [Neisseria subflava NJ9703]
gi|11134094|sp|Q9JX80|NUOC_NEIMA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|121051075|emb|CAM07345.1| NADH dehydrogenase I chain C [Neisseria meningitidis Z2491]
gi|241318850|gb|EER55376.1| NADH-quinone oxidoreductase, c subunit [Neisseria flavescens SK114]
gi|284798052|gb|EFC53399.1| NADH dehydrogenase, C subunit [Neisseria subflava NJ9703]
gi|319411274|emb|CBY91681.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C;
NDH-1, chain C) [Neisseria meningitidis WUE 2594]
gi|325129041|gb|EGC51891.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
N1568]
Length = 197
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|296313745|ref|ZP_06863686.1| NADH dehydrogenase, C subunit [Neisseria polysaccharea ATCC 43768]
gi|296839668|gb|EFH23606.1| NADH dehydrogenase, C subunit [Neisseria polysaccharea ATCC 43768]
Length = 197
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 80/203 (39%), Positives = 122/203 (60%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYISVMTTLRDHEELHFELLVDLC 60
Query: 62 GVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ L + RF VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNELWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|99034973|ref|ZP_01314776.1| hypothetical protein Wendoof_01000399 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 190
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ YI G + + ++ FLRDD C F ++D+ GVD
Sbjct: 1 MDKTAKYIQKK--TKCECIQKDDGIIVIYSTLDEIEKYLFFLRDDKKCRFELLVDIFGVD 58
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ +R RF+++Y+ LS +N R+ +K+ + E PS+ I+ A WFEREV+DMYGI F
Sbjct: 59 YPNREKRFELIYNLLSIVHNIRVHIKLQLCESDMPPSVAKIFSTALWFEREVFDMYGIEF 118
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
HPDLRRILTDYGF+GHP+ KDFP+TG+ E+ YD + KKVVY P++L Q+ R +D LSP
Sbjct: 119 SDHPDLRRILTDYGFKGHPMLKDFPLTGYEEVRYDIETKKVVYNPIDLPQDFRMFDSLSP 178
Query: 185 WEG 187
WEG
Sbjct: 179 WEG 181
>gi|42520926|ref|NP_966841.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|225631315|ref|ZP_03787990.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|42410667|gb|AAS14775.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|225590990|gb|EEH12197.1| NADH dehydrogenase I, C subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 190
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ YI G + + ++ FLRDD C F ++D+ GVD
Sbjct: 1 MDKTAKYIQKK--TKCECIQKDDGIIVIYSTLDEIEKYLFFLRDDEKCRFELLVDIFGVD 58
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ +R RF+++Y+ LS +N R+ +K+ + E PS+ I+ A WFEREV+DMYGI F
Sbjct: 59 YPNREKRFELIYNLLSIVHNIRVHIKLQLCESDMPPSVAKIFSTALWFEREVFDMYGIEF 118
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
HPDLRRILTDYGF+GHP+ KDFP+TG+ E+ YD + KKVVY P++L Q+ R +D LSP
Sbjct: 119 SDHPDLRRILTDYGFKGHPMLKDFPLTGYEEVRYDIETKKVVYNPIDLPQDFRMFDSLSP 178
Query: 185 WEG 187
WEG
Sbjct: 179 WEG 181
>gi|308388463|gb|ADO30783.1| NADH dehydrogenase I chain C [Neisseria meningitidis alpha710]
Length = 197
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 120/203 (59%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ VS+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYVSVMTTLRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|171463528|ref|YP_001797641.1| NADH (or F420H2) dehydrogenase, subunit C [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|218534306|sp|B1XUK0|NUOC_POLNS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|171193066|gb|ACB44027.1| NADH (or F420H2) dehydrogenase, subunit C [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 199
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 107/181 (59%), Gaps = 8/181 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ L + ++ ++GE+++ V +RDDP F +IDL
Sbjct: 1 MSERLIQLAANLKKVLGKRIQSVEIALGEVTVVVYADTYFESAMLMRDDPSLAFEQLIDL 60
Query: 61 CGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ RF VV H LS ++N RLRV++ + V S+ ++ A+WF
Sbjct: 61 CGVDYQDFRDGAWAGQRFGVVSHLLSLEHNWRLRVRVFAPDDSYPLVASVSPVWNSANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD ++K+V+Y+PV +
Sbjct: 121 EREAFDLYGILFDGHDDLRRILTDYGFIGHPFRKDFPISGNVEMRYDPELKRVIYQPVTI 180
Query: 173 M 173
Sbjct: 181 E 181
>gi|299530744|ref|ZP_07044159.1| NADH (or F420H2) dehydrogenase, subunit C [Comamonas testosteroni
S44]
gi|298721260|gb|EFI62202.1| NADH (or F420H2) dehydrogenase, subunit C [Comamonas testosteroni
S44]
Length = 190
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 112/193 (58%), Gaps = 18/193 (9%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR--- 68
+ + VR + GE++++V + + LR+ P C F ++DLCGVD+ +
Sbjct: 2 VTAALGDRVRSVTLAYGEVTVEVSADKYLDVMQILRNAPDCQFEMLLDLCGVDYSTYAEV 61
Query: 69 ---SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIF 123
RF VV H +S N+RLRV++ A+ V SI I+ A+WFERE +D++GI
Sbjct: 62 GKDGPRFAVVSHLMSLTLNQRLRVRVYCADDDFPVVASINPIWNSANWFEREAFDLFGIV 121
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
FEGH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY+PV +
Sbjct: 122 FEGHEDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDAEQQRVVYQPVTIE---------- 171
Query: 184 PWEGVNSLFAKED 196
P E + +E+
Sbjct: 172 PREITPRIIREEN 184
>gi|253998385|ref|YP_003050448.1| NADH (or F420H2) dehydrogenase subunit C [Methylovorus sp. SIP3-4]
gi|313200461|ref|YP_004039119.1| NADH (or f420h2) dehydrogenase subunit c [Methylovorus sp. MP688]
gi|253985064|gb|ACT49921.1| NADH (or F420H2) dehydrogenase, subunit C [Methylovorus sp. SIP3-4]
gi|312439777|gb|ADQ83883.1| NADH (or F420H2) dehydrogenase, subunit C [Methylovorus sp. MP688]
Length = 198
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 115/181 (63%), Gaps = 8/181 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++ L I ++ + V+ VGEL+++ +++ +C LRD P F +IDL
Sbjct: 1 MSSRLQQLTANIESALGDKLGRLVSHVGELTIECSVANMLDVCLILRDHPSLKFEQLIDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ VYHFLS N+R+R+++ A+ +P++V ++P A+WF
Sbjct: 61 CGVDYAEYGEGSWSGLRFATVYHFLSISLNQRVRLRVFAADDDFPVLPTLVDMWPVANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI +EGHPDLRR+LTDYGF GHP RKDFP+ G VE+ YD + ++V+Y+PV +
Sbjct: 121 ERESFDLYGIMYEGHPDLRRLLTDYGFVGHPFRKDFPMIGNVEMRYDPEQQRVIYQPVTI 180
Query: 173 M 173
Sbjct: 181 D 181
>gi|261391775|emb|CAX49230.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C;
NDH-1, chain C) [Neisseria meningitidis 8013]
Length = 197
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ VS+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYVSVMTTLRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS + N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVQNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|218679173|ref|ZP_03527070.1| NADH dehydrogenase subunit C [Rhizobium etli CIAT 894]
Length = 120
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 77/119 (64%), Positives = 91/119 (76%)
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
PK N R+RVK+A E VPS ++PGADWFERE WDMYG+ F GHPDLRRILTDYGFE
Sbjct: 1 PKQNLRIRVKVATDEDTPVPSACAVHPGADWFERETWDMYGVLFTGHPDLRRILTDYGFE 60
Query: 141 GHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKD 199
GHPLRKDFP TGFVE+ YDD K+VVY PVEL QE R++DF+SPWEG + + ++
Sbjct: 61 GHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFMSPWEGTDYVLPGDEKAK 119
>gi|41019517|sp|Q95748|NDUS3_ARATH RecName: Full=NADH-ubiquinone oxidoreductase 27 kDa subunit;
AltName: Full=Complex I-27kD; Short=CI-27kD; AltName:
Full=NADH dehydrogenase subunit 9
Length = 190
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L FL+ + +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F HPDLRR
Sbjct: 72 EVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+V++ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVQVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|241763290|ref|ZP_04761347.1| NADH (or F420H2) dehydrogenase, subunit C [Acidovorax delafieldii
2AN]
gi|241367565|gb|EER61852.1| NADH (or F420H2) dehydrogenase, subunit C [Acidovorax delafieldii
2AN]
Length = 202
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 108/199 (54%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L D I R ++ E+++ V D LRD C F +IDLCGVD+
Sbjct: 9 EKLKDAIAAVLGAKARQITVALEEVTVVVAAADYRDAMQLLRDSEACRFEQLIDLCGVDY 68
Query: 66 LSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
S +++ VV H LS N+R+RVK+ + V S+ ++ A+W+ERE +
Sbjct: 69 SSYADKVHEGARYGVVSHLLSVSLNQRVRVKVFCPDDDFPVVASVSDLWNSANWYEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D++GI F+GH DLRRILTDYGF GHP RKDFP++G VE+ YD + ++VVY PV +
Sbjct: 129 DLFGIVFDGHNDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDTERRRVVYEPVSIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + ++
Sbjct: 185 ------PREITPRIIREDK 197
>gi|161870821|ref|YP_001599994.1| NADH dehydrogenase subunit C [Neisseria meningitidis 053442]
gi|218534321|sp|A9M3E0|NUOC_NEIM0 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|161596374|gb|ABX74034.1| NADH dehydrogenase I chain C [Neisseria meningitidis 053442]
Length = 197
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 120/203 (59%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V +Y ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVPVYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|89900288|ref|YP_522759.1| NADH (or F420H2) dehydrogenase subunit C [Rhodoferax ferrireducens
T118]
gi|122479524|sp|Q21YC5|NUOC_RHOFD RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|89345025|gb|ABD69228.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodoferax ferrireducens
T118]
Length = 202
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + ++ + + +V + EL++ VD + LRDDP+C F ++DLCGVD+
Sbjct: 9 QSIKVHVEAALGDLLISSVLRLDELTVVVDGAHYLQAAKILRDDPNCRFEQLMDLCGVDY 68
Query: 66 ------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVW 117
R+ VV H LS N+R+R+K+ + S+ ++ A+WFERE +
Sbjct: 69 STYKDQPQTGLRYCVVSHLLSVSLNQRVRLKVFAPDDNLPVVQSLCDVWSSANWFEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D++GI FEGH DLRRILTDYGF GHP RKDFPV+G VE+ YD ++K+VVY+PV +
Sbjct: 129 DLFGIVFEGHADLRRILTDYGFVGHPFRKDFPVSGHVEMRYDAELKRVVYQPVTIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 185 ------PREITPRIIREDN 197
>gi|226939458|ref|YP_002794531.1| NADH-quinone oxidoreductase [Laribacter hongkongensis HLHK9]
gi|254767811|sp|C1DCA5|NUOC_LARHH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|226714384|gb|ACO73522.1| NADH-quinone oxidoreductase [Laribacter hongkongensis HLHK9]
Length = 195
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 109/204 (53%), Gaps = 20/204 (9%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ L + + + A GEL++ + C LRD F IDL
Sbjct: 1 MASSLDALKARVESLLGDHLESATIDRGELTIVCSASSIAVSCQLLRD--QAGFDQCIDL 58
Query: 61 CGVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ L RF VV H +S + N+RLRV+ + VPS++ ++ +W+
Sbjct: 59 CGMDYSTYRDGLHDRPRFAVVLHLMSVQNNQRLRVRFFAPDDDFPVVPSLIDVWASVNWY 118
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +DMYGI FEGHPDLRRILTDYGF GHP RKDFPV+G VE+ YD +V+Y+PV +
Sbjct: 119 EREAFDMYGIVFEGHPDLRRILTDYGFVGHPFRKDFPVSGHVEMRYDPTEGRVIYQPVTI 178
Query: 173 MQEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 179 E----------PREITPRIIREEN 192
>gi|325203360|gb|ADY98813.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
M01-240355]
Length = 197
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
>gi|319638816|ref|ZP_07993574.1| NADH-quinone oxidoreductase subunit C [Neisseria mucosa C102]
gi|317399720|gb|EFV80383.1| NADH-quinone oxidoreductase subunit C [Neisseria mucosa C102]
Length = 197
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 121/203 (59%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V F ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVVGVFGEQAGKVISALGEITVECLPEHYISVMTALRDHEDLHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSIKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|15676167|ref|NP_273299.1| NADH dehydrogenase subunit C [Neisseria meningitidis MC58]
gi|11134102|sp|Q9K1C1|NUOC_NEIMB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|7225465|gb|AAF40697.1| NADH dehydrogenase I, C subunit [Neisseria meningitidis MC58]
gi|316985171|gb|EFV64123.1| NADH-quinone oxidoreductase subunit C [Neisseria meningitidis
H44/76]
gi|325141079|gb|EGC63582.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
CU385]
gi|325199446|gb|ADY94901.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
H44/76]
Length = 197
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I+DL + + ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQDLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|254674106|emb|CBA09890.1| respiratory-chain NADH dehydrogenase, 30 kDa subunit [Neisseria
meningitidis alpha275]
Length = 197
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + + ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGK--SVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDNFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|145589232|ref|YP_001155829.1| NADH (or F420H2) dehydrogenase, subunit C [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|218534319|sp|A4SXQ1|NUOC_POLSQ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|145047638|gb|ABP34265.1| NADH dehydrogenase subunit C [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 199
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 108/181 (59%), Gaps = 8/181 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ L + V+ ++GE+++ V+ +RDDP F +IDL
Sbjct: 1 MSDRLVHLAANLEKVLGKRVQSIEIALGEVTVVVNADTYFESAMLMRDDPSLAFEQLIDL 60
Query: 61 CGVDFL------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CGVD+ RF VV H LS ++N RLRV++ + V SI ++ A+WF
Sbjct: 61 CGVDYQDFRDGAWNGQRFGVVSHLLSLEHNWRLRVRVFAPDDSYPLVASITPVWSSANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI FEGH DLRRILTDYGF GHP RKDFP++G VE+ YD ++K+VVY+PV +
Sbjct: 121 EREAFDLYGIIFEGHEDLRRILTDYGFIGHPFRKDFPISGNVEMRYDPELKRVVYQPVTI 180
Query: 173 M 173
Sbjct: 181 E 181
>gi|157828357|ref|YP_001494599.1| NADH dehydrogenase subunit C [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157800838|gb|ABV76091.1| NADH dehydrogenase subunit C [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 242
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 122/233 (52%), Gaps = 36/233 (15%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + + + L+ ++ L+ L++ F + DL G
Sbjct: 2 TLDKLIERLAAKSNILITPITVK-DYLAYKIEPNFLLPFLKALKESEELRFTLLTDLFGA 60
Query: 64 DFLSRS-----------------------------------NRFDVVYHFLSPKYNRRLR 88
DF + RF+VVY+ LS K N+RL
Sbjct: 61 DFPQNNVVNSVGLGHKEQGAKPITNRRTTSDNVGESKSIDYKRFEVVYNLLSLKLNKRLI 120
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+K+ ++E +++PS + I+ A W+EREV+DMYG+ FEG+ D RRILTDY FEGHPLRKDF
Sbjct: 121 IKVYISEQETIPSAMSIFSAACWYEREVYDMYGVNFEGNDDKRRILTDYEFEGHPLRKDF 180
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDM 201
P+TG+ ++ YD+K+KKV Y PV+L E+R++DF S W + + ++ ++
Sbjct: 181 PLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHWHSPSYVLPGDEKATNV 233
>gi|319794666|ref|YP_004156306.1| NADH (or f420h2) dehydrogenase, subunit c [Variovorax paradoxus
EPS]
gi|315597129|gb|ADU38195.1| NADH (or F420H2) dehydrogenase, subunit C [Variovorax paradoxus
EPS]
Length = 203
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 18/197 (9%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L I + + ++GE+++ V D + + LRD P C F +IDLCG+D+
Sbjct: 11 LRATITETLGAKAKSVTLALGEVTVVVSAADYIEAATLLRDAPGCRFEQLIDLCGMDYSD 70
Query: 68 R------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDM 119
R+ VV H LS N+R+R+K+ S+ ++ A WFERE +D+
Sbjct: 71 YREGEWQGERYGVVSHLLSVTLNQRVRLKVFAPNEDLPVVDSLQPVWNAATWFEREAFDL 130
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI F+GH DLRRILTDYGF GHP RKDFPV+G VE+ YD++ K+VVY+PV +
Sbjct: 131 YGIVFDGHDDLRRILTDYGFIGHPFRKDFPVSGHVEMRYDEEQKRVVYQPVSIE------ 184
Query: 180 DFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 185 ----PREITPRVIREDN 197
>gi|325135046|gb|EGC57674.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
M13399]
gi|325145307|gb|EGC67585.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
M01-240013]
gi|325205328|gb|ADZ00781.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
M04-240196]
Length = 197
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + ++ ++++GE++++ +S + LRD F ++DLC
Sbjct: 1 MASIQNLYETVIGVLGNQAGKVISALGEITVECLPEHYISAMTALRDHEDLHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|225077018|ref|ZP_03720217.1| hypothetical protein NEIFLAOT_02070 [Neisseria flavescens
NRL30031/H210]
gi|224951575|gb|EEG32784.1| hypothetical protein NEIFLAOT_02070 [Neisseria flavescens
NRL30031/H210]
Length = 197
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + + ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD+ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEAQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|261400471|ref|ZP_05986596.1| NADH-quinone oxidoreductase chain 5 [Neisseria lactamica ATCC
23970]
gi|269209730|gb|EEZ76185.1| NADH-quinone oxidoreductase chain 5 [Neisseria lactamica ATCC
23970]
gi|309379801|emb|CBX21577.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|325137070|gb|EGC59666.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
M0579]
gi|325202928|gb|ADY98382.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
M01-240149]
gi|325207274|gb|ADZ02726.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
NZ-05/33]
Length = 197
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + + ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|34580592|ref|ZP_00142072.1| NADH dehydrogenase I chain C [Rickettsia sibirica 246]
gi|28261977|gb|EAA25481.1| NADH dehydrogenase I chain C [Rickettsia sibirica 246]
Length = 242
Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 36/233 (15%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + S + L+ ++ L+ L L++ F + DL G
Sbjct: 2 TLDKLIERLAAKSSILITPITVK-DYLAYKIEPNFLLPLLKALKESEELRFTLLTDLFGA 60
Query: 64 DFLSRS-----------------------------------NRFDVVYHFLSPKYNRRLR 88
DF + RF+VVY+ LS K N+RL
Sbjct: 61 DFPQNNVVNSVGLGHKEQGAKPITNRSTTSDNVGESKSIDYKRFEVVYNLLSLKLNKRLI 120
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+K+ ++E +++PS + I+ A W+EREV+DMYG+ FEG+ D RRILTDY FEGHPLRKDF
Sbjct: 121 IKVYISEKETIPSAMNIFSAACWYEREVYDMYGVNFEGNDDKRRILTDYEFEGHPLRKDF 180
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDM 201
P+TG+ ++ YD+K+KKV Y PV+L E+R++DF S W + + ++ D+
Sbjct: 181 PLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHWHSPSYVLPGDEKATDV 233
>gi|319943350|ref|ZP_08017632.1| NADH-quinone oxidoreductase subunit C [Lautropia mirabilis ATCC
51599]
gi|319743165|gb|EFV95570.1| NADH-quinone oxidoreductase subunit C [Lautropia mirabilis ATCC
51599]
Length = 202
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 70/181 (38%), Positives = 109/181 (60%), Gaps = 10/181 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M E L + ++ + ++GE+++++ +C LRDDP F +IDL
Sbjct: 1 MST--ETLVAALQDALGERILGLSTALGEVTIEISGDCHHIVCERLRDDPRLGFEVMIDL 58
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ + N VV LS ++N R+R++ + V ++ ++P A+WF
Sbjct: 59 CGIDYSTYGNAEWDAPRFAVVMQLLSIRHNHRVRLRSFCMDDEAPMVETVTDLWPCANWF 118
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D++GI F GHPDLRRILTDYGF GHP RKDFP++G+ E+ YD+K ++VVY+PV +
Sbjct: 119 EREAFDLFGIVFSGHPDLRRILTDYGFIGHPFRKDFPISGYTEMRYDEKQRRVVYQPVTI 178
Query: 173 M 173
Sbjct: 179 E 179
>gi|229586622|ref|YP_002845123.1| NADH dehydrogenase subunit C [Rickettsia africae ESF-5]
gi|228021672|gb|ACP53380.1| NADH dehydrogenase I chain C [Rickettsia africae ESF-5]
Length = 242
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 122/233 (52%), Gaps = 36/233 (15%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + S + L+ ++ L+ L++ F + DL G
Sbjct: 2 TLDKLIERLAAKSSILITPITVK-DYLAYKIEPNFLLPFLKALKESEELRFTLLTDLFGA 60
Query: 64 DFLSRS-----------------------------------NRFDVVYHFLSPKYNRRLR 88
DF + RF+VVY+ LS K N+RL
Sbjct: 61 DFPQNNVVNSVGLGHKEQGAKPITNRRTTSDNVGESKSIDYKRFEVVYNLLSLKLNKRLI 120
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+K+ ++E +++PS + I+ A W+EREV+DMYGI FEG+ D RRILTDY FEGHPLRKDF
Sbjct: 121 IKVYISEKETIPSAMNIFSAACWYEREVYDMYGINFEGNDDKRRILTDYEFEGHPLRKDF 180
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDM 201
P+TG+ ++ YD+K+KKV Y PV+L E+R++DF S W + + ++ D+
Sbjct: 181 PLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHWHSPSYVLPGDEKATDV 233
>gi|15892406|ref|NP_360120.1| NADH dehydrogenase subunit C [Rickettsia conorii str. Malish 7]
gi|81528332|sp|Q92ID7|NUOC_RICCN RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|15619557|gb|AAL03021.1| NADH dehydrogenase I chain C [Rickettsia conorii str. Malish 7]
Length = 242
Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 36/233 (15%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + S + L+ ++ L+ L++ F + DL G
Sbjct: 2 TLDKLIEKLAAKSSILITPITVK-DYLAYKIEPNFLLPFLKALKESEELRFTLLTDLFGA 60
Query: 64 DFLSRS-----------------------------------NRFDVVYHFLSPKYNRRLR 88
DF + RF+VVY+ LS K N+RL
Sbjct: 61 DFPQNNVVNSVGLGHKEQGAKPITNRRTTSDNVGESKSIDYKRFEVVYNLLSLKLNKRLI 120
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+K+ ++E +++PS + I+ A W+EREV+DMYG+ FEG+ D RRILTDY FEGHPLRKDF
Sbjct: 121 IKVYISEKETIPSAMNIFSAACWYEREVYDMYGVNFEGNDDKRRILTDYEFEGHPLRKDF 180
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDM 201
P+TG+ ++ YD+K+KKV Y PV+L E+R++DF S W + + ++ D+
Sbjct: 181 PLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHWHSPSYVLPGDEKATDV 233
>gi|198284344|ref|YP_002220665.1| NADH (or F420H2) dehydrogenase subunit C [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218666570|ref|YP_002427006.1| NADH-quinone oxidoreductase, C subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218534236|sp|B5EN69|NUOC_ACIF5 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|226737321|sp|B7J7U3|NUOC_ACIF2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|198248865|gb|ACH84458.1| NADH (or F420H2) dehydrogenase, subunit C [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218518783|gb|ACK79369.1| NADH-quinone oxidoreductase, C subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 202
Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E+L ++ + ++R A GEL++++ + C LRDD C F ++D+
Sbjct: 1 MTDALENLRQHLSDELGATLRTAHLDRGELTVELSREGFPAACLLLRDDVACAFDLLVDV 60
Query: 61 CGVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFE 113
CGVD+ L RF VVYH LS K+ +RLRV+I + + +V ++ A+WFE
Sbjct: 61 CGVDYSAYGEGLWEGPRFAVVYHLLSLKHRQRLRVRIFADDDLPIVPSVVEVWAAANWFE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F+GHPDLRRILTDYGF GHP RKDFP+ G VE+ YD +VVY P
Sbjct: 121 REAFDLYGILFDGHPDLRRILTDYGFVGHPFRKDFPLVGTVEMRYDADQGRVVYEPTRTE 180
>gi|325130971|gb|EGC53698.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
OX99.30304]
Length = 197
Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I+DL + + ++++GE++++ VS+ + LRD F ++DLC
Sbjct: 1 MASIQDLYETVSRVLGNQAGKVISALGEITVECLPEHYVSVMTTLRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEAWRGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVNIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|254670955|emb|CBA07621.1| respiratory-chain NADH dehydrogenase, 30 kDa subunit [Neisseria
meningitidis alpha153]
Length = 197
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + + ++++GE++++ +S+ LRD F ++DLC
Sbjct: 1 MASIQNLYETVSRVLGNQASKVISALGEITVECLPEHYISVMIALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|238651036|ref|YP_002916893.1| NADH dehydrogenase subunit C [Rickettsia peacockii str. Rustic]
gi|238625134|gb|ACR47840.1| NADH dehydrogenase subunit C [Rickettsia peacockii str. Rustic]
Length = 242
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 36/233 (15%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + S + L+ ++ L+ L++ F + DL G
Sbjct: 2 TLDKLIERLAAKSSILITPITVK-DYLAYKIEPNFLLPFLKALKESEELRFTLLTDLFGA 60
Query: 64 DFLSRS-----------------------------------NRFDVVYHFLSPKYNRRLR 88
DF + RF+VVY+ LS K N+RL
Sbjct: 61 DFPQNNVVNSVGLGHKEQGAKPITNRRTTSDNVGESKSIDYKRFEVVYNLLSLKLNKRLI 120
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+K+ ++E +++PS + I+ A W+EREV+DMYG+ FEG+ D RRILTDY FEGHPLRKDF
Sbjct: 121 IKVYISEKETIPSAMNIFSAACWYEREVYDMYGVNFEGNDDKRRILTDYEFEGHPLRKDF 180
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDM 201
P+TG+ ++ YD+K+KKV Y PV+L E+R++DF S W + + ++ ++
Sbjct: 181 PLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHWHSPSYVLPGDEKATNV 233
>gi|229328252|ref|YP_002860265.1| NADH dehydrogenase subunit 9 [Megaceros aenigmaticus]
gi|186695221|gb|ACC86788.1| NADH dehydrogenase subunit 9 [Nothoceros aenigmaticus]
Length = 191
Score = 184 bits (466), Expect = 8e-45, Method: Composition-based stats.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++ ++ + + S E L + L L F + + F +ID+
Sbjct: 1 MDKQL--FLKSLIATLPKRIHQFKTSKHENILYTNPDYLFELLWFPKHHTNTRFQVLIDI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RF+VV++ S +YN R+RV+ +V E + S+VGI+P A W+EREVWDM+
Sbjct: 59 RGVDYPSRKRRFEVVHNSPSIRYNSRIRVESSVNEITPICSVVGIFPSAGWWEREVWDMF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G + HPD RRI DYG EGH LRKD P++G+ E+ YDD K+VV P+E+ QE R +D
Sbjct: 119 GAYSSNHPDSRRISIDYGSEGHLLRKDLPLSGYFEVRYDDSEKRVVSEPIEMTQESRYFD 178
Query: 181 FLSPWE 186
F SPWE
Sbjct: 179 FASPWE 184
>gi|313669284|ref|YP_004049568.1| NADH dehydrogenase I chain C [Neisseria lactamica ST-640]
gi|313006746|emb|CBN88216.1| NADH dehydrogenase I chain C [Neisseria lactamica 020-06]
Length = 197
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + + ++++ E++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVSRVLGNQAGKVISALDEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +DMYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|237746749|ref|ZP_04577229.1| NADH-quinone oxidoreductase subunit C/D [Oxalobacter formigenes
HOxBLS]
gi|229378100|gb|EEO28191.1| NADH-quinone oxidoreductase subunit C/D [Oxalobacter formigenes
HOxBLS]
Length = 200
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 116/204 (56%), Gaps = 20/204 (9%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M R +L D + F ++ + S GE+++ V+ + LRDD F +IDL
Sbjct: 1 MQRNPVELADRLRAVFGAKLKDLIESFGEVTIVVNKAVYPDVMGQLRDDSRFRFEELIDL 60
Query: 61 CGVDFLSRSN--------RFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGAD 110
CGVD+ N RF VV H LS +N RLRV++ + PSI+ I+P A+
Sbjct: 61 CGVDYAGYGNEEKGLKGKRFAVVVHLLSLAFNCRLRVRVFADDDAMPEVPSIMAIWPAAN 120
Query: 111 WFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPV 170
WFERE +D+YGI F+GHPDLRRILTDYGF G+P RKDFPV G+VE+ YD+K K+VVY+PV
Sbjct: 121 WFEREAFDLYGILFKGHPDLRRILTDYGFVGYPFRKDFPVQGYVEMRYDEKQKRVVYQPV 180
Query: 171 ELMQEHRDYDFLSPWEGVNSLFAK 194
+ P E +
Sbjct: 181 TIE----------PREITPRVIRD 194
>gi|121634115|ref|YP_974360.1| NADH dehydrogenase subunit C [Neisseria meningitidis FAM18]
gi|218534322|sp|A1KRS4|NUOC_NEIMF RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|120865821|emb|CAM09553.1| NADH dehydrogenase I chain C [Neisseria meningitidis FAM18]
gi|325131611|gb|EGC54318.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
M6190]
gi|325139134|gb|EGC61680.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
ES14902]
gi|325143084|gb|EGC65431.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
961-5945]
gi|325143154|gb|EGC65500.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
961-5945]
gi|325197529|gb|ADY92985.1| NADH:ubiquinone dehydrogenase, C subunit [Neisseria meningitidis
G2136]
Length = 197
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + + ++++GE++++ +S+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V IY ADW+E
Sbjct: 61 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|332528753|ref|ZP_08404730.1| NADH (or F420H2) dehydrogenase, subunit C [Hylemonella gracilis
ATCC 19624]
gi|332041819|gb|EGI78168.1| NADH (or F420H2) dehydrogenase, subunit C [Hylemonella gracilis
ATCC 19624]
Length = 202
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 113/199 (56%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L + + + VR + E++++V D + LRD P C F +IDLCGVD+
Sbjct: 9 EALKNAVTAALGELVRRIEVRLDEVTVEVAPKDYRTAAMLLRDAPGCQFEQLIDLCGVDY 68
Query: 66 LSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ + VV H LS N+R+R+K+ + + S+ ++ A+W+ERE +
Sbjct: 69 SAYGDGAWEGARYAVVSHLLSVSLNQRVRLKVYATDDEFPVLDSLTSVWAAANWYEREAF 128
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
D++GI FEGH DLRRILTDYGF GHP RKDFP++G VE+ YD ++++VVY+PV +
Sbjct: 129 DLFGIVFEGHDDLRRILTDYGFIGHPFRKDFPLSGHVEMRYDAELQRVVYQPVSIE---- 184
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 185 ------PREITPRIIREDN 197
>gi|59802070|ref|YP_208782.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae FA 1090]
gi|194099645|ref|YP_002002776.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae NCCP11945]
gi|239999842|ref|ZP_04719766.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae 35/02]
gi|240015001|ref|ZP_04721914.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae DGI18]
gi|240017449|ref|ZP_04723989.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae FA6140]
gi|240081588|ref|ZP_04726131.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae FA19]
gi|240113870|ref|ZP_04728360.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae MS11]
gi|240116601|ref|ZP_04730663.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae PID18]
gi|240118825|ref|ZP_04732887.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae PID1]
gi|240122070|ref|ZP_04735032.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae PID24-1]
gi|240124364|ref|ZP_04737320.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae PID332]
gi|240126576|ref|ZP_04739462.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae SK-92-679]
gi|240129041|ref|ZP_04741702.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae SK-93-1035]
gi|254494625|ref|ZP_05107796.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae 1291]
gi|260439638|ref|ZP_05793454.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae DGI2]
gi|268595652|ref|ZP_06129819.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae 35/02]
gi|268597684|ref|ZP_06131851.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae FA19]
gi|268599936|ref|ZP_06134103.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae MS11]
gi|268602270|ref|ZP_06136437.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae PID18]
gi|268604536|ref|ZP_06138703.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae PID1]
gi|268682991|ref|ZP_06149853.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae
PID332]
gi|268685156|ref|ZP_06152018.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae
SK-92-679]
gi|268687419|ref|ZP_06154281.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae
SK-93-1035]
gi|291042879|ref|ZP_06568620.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae DGI2]
gi|293398110|ref|ZP_06642315.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae F62]
gi|75355477|sp|Q5F617|NUOC_NEIG1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534297|sp|B4RPI2|NUOC_NEIG2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|59718965|gb|AAW90370.1| putative NADH dehydrogenase I chain C [Neisseria gonorrhoeae FA
1090]
gi|193934935|gb|ACF30759.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae NCCP11945]
gi|226513665|gb|EEH63010.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae 1291]
gi|268549041|gb|EEZ44459.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae 35/02]
gi|268551472|gb|EEZ46491.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae FA19]
gi|268584067|gb|EEZ48743.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae MS11]
gi|268586401|gb|EEZ51077.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae PID18]
gi|268588667|gb|EEZ53343.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae PID1]
gi|268623275|gb|EEZ55675.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae
PID332]
gi|268625440|gb|EEZ57840.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae
SK-92-679]
gi|268627703|gb|EEZ60103.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae
SK-93-1035]
gi|291013313|gb|EFE05279.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae DGI2]
gi|291611373|gb|EFF40443.1| NADH-quinone oxidoreductase subunit C [Neisseria gonorrhoeae F62]
gi|317165130|gb|ADV08671.1| NADH dehydrogenase subunit C [Neisseria gonorrhoeae TCDC-NG08107]
Length = 197
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + +V ++++GE++++ +S+ + L D F ++DLC
Sbjct: 1 MASIQNLYETVVGVLGDQAGKVISALGEITVECLPEHYISVMTALHDHEDLHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+ IY ADW+E
Sbjct: 61 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVADIYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|255067283|ref|ZP_05319138.1| NADH-quinone oxidoreductase chain 5 [Neisseria sicca ATCC 29256]
gi|255048434|gb|EET43898.1| NADH-quinone oxidoreductase chain 5 [Neisseria sicca ATCC 29256]
Length = 197
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L D + ++++GE++++ VS+ + LRD F ++DLC
Sbjct: 1 MASIQNLYDTVSRVLGNQASKVISALGEVTVECLPEHYVSVMTTLRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V +Y ADW+E
Sbjct: 61 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVPVYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|289619332|emb|CBI53615.1| unnamed protein product [Sordaria macrospora]
Length = 266
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 24/189 (12%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ G +++ ++ D+ + + D+
Sbjct: 76 ADNLHKYGSWLMGCLPKYIQQFS-----------------------DNTAAEYTQVSDIT 112
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VDF ++ RF+VVY+ LS ++N R+RVK V E VPSI +Y GA+W+EREV+D++G
Sbjct: 113 AVDFPTKDQRFEVVYNLLSVRHNSRIRVKTYVDEVSPVPSITPLYNGANWYEREVYDLFG 172
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD- 180
+FF GHPDLRRI+TDYGF+GHPLRKDFP+TG+ E+ +D++ K++V P+E+ Q R+++
Sbjct: 173 VFFTGHPDLRRIMTDYGFDGHPLRKDFPMTGYTEIRWDEEKKRIVTEPLEMTQAFRNFEG 232
Query: 181 FLSPWEGVN 189
S WE V
Sbjct: 233 GSSAWEQVG 241
>gi|38605724|sp|P80261|NDUS3_SOLTU RecName: Full=NADH-ubiquinone oxidoreductase 27 kDa subunit;
AltName: Full=Complex I-27 kDa; Short=CI-27kD; AltName:
Full=NADH dehydrogenase subunit 9
Length = 190
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 14 NSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ V+ S D + L L F++ + +ID+CGVD+ SR RF
Sbjct: 12 ETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFMKLHTYTRVQVLIDICGVDYPSRKQRF 71
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+VVY+ LS +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+F HPDLRR
Sbjct: 72 EVVYNLLSIRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVFSINHPDLRR 131
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
ILTDYGFEGHPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 132 ILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|237748889|ref|ZP_04579369.1| NADH-quinone oxidoreductase subunit C/D [Oxalobacter formigenes
OXCC13]
gi|229380251|gb|EEO30342.1| NADH-quinone oxidoreductase subunit C/D [Oxalobacter formigenes
OXCC13]
Length = 200
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 113/206 (54%), Gaps = 20/206 (9%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M R L + + F + E++L + D + + L+ P F +IDL
Sbjct: 1 MRRHPAQLIEILRAVFGERITHLSEDFSEVTLVIGKSDYLDVMKTLKGAPELQFAELIDL 60
Query: 61 CGVDFLSR--------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGAD 110
CG+D+ RF VV H LS ++N RLRV++ + + PSIV I+P A+
Sbjct: 61 CGIDYAGYNNDPNGLEGKRFAVVSHLLSLEFNCRLRVRVFAEDEQMPSVPSIVDIWPSAN 120
Query: 111 WFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPV 170
WFERE +D+YGI F+GHPDLRRILTDYGF GHP RKDFP+ G+VE+ YD++ K+VVY+PV
Sbjct: 121 WFEREAFDLYGILFDGHPDLRRILTDYGFVGHPFRKDFPIQGYVEMRYDEEQKRVVYQPV 180
Query: 171 ELMQEHRDYDFLSPWEGVNSLFAKED 196
+ P E + +
Sbjct: 181 TIE----------PREITPRVIRDDK 196
>gi|300113267|ref|YP_003759842.1| NADH /F420H2 dehydrogenase subunit C [Nitrosococcus watsonii C-113]
gi|299539204|gb|ADJ27521.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrosococcus watsonii
C-113]
Length = 230
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 109/204 (53%), Gaps = 31/204 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + DL + F G + GEL+++V ++C LRD+ F +IDL
Sbjct: 1 MANGVADLRRRVEGRFDGEIGSCRLDRGELTIEVPRESYFAVCKTLRDEEDFGFEQLIDL 60
Query: 61 CGVDFLSRSN------------------------------RFDVVYHFLSPKYNRRLRVK 90
CGVD+L RF VV H LS ++N RLRV+
Sbjct: 61 CGVDYLEHGVADWATRKATAQGFGRAVERRQHKEQAWAGLRFAVVVHLLSVRHNWRLRVR 120
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
V E V ++ ++ A+WFERE +D++GI F+GHPDLRRILTDYGF GHP RKDFP
Sbjct: 121 TFVDEEILVVPSVIQLWASANWFEREAFDLFGILFDGHPDLRRILTDYGFIGHPFRKDFP 180
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
++G VE+ YD + ++V+Y PV +
Sbjct: 181 LSGNVEMRYDPEQQRVIYEPVSIE 204
>gi|325303432|tpg|DAA34135.1| TPA_exp: NADH-ubiquinone oxidoreductase NDUFS3 30 kDa subunit
[Amblyomma variegatum]
Length = 217
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 79/159 (49%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
K+ED G Y+ V+ + G EL + + +V + SFL+D + + NI+D+CG
Sbjct: 59 KLEDFGRYVAECLPKYVQKVQITPGDELEVMIAPEGIVPVLSFLKDHQNAQYTNIVDICG 118
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD +R RF+VVYH LS +N R+RVK E + S ++ GA+W+EREVWDMYG+
Sbjct: 119 VDVPTRQYRFEVVYHLLSVHFNSRIRVKTYTDELTPLDSATAVFKGANWYEREVWDMYGV 178
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
FF HPDLRRILTDYGFEGHP RKDFP++G+VE+ YDD+
Sbjct: 179 FFGNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDE 217
>gi|30249735|ref|NP_841805.1| NADH dehydrogenase subunit C [Nitrosomonas europaea ATCC 19718]
gi|75540323|sp|Q82TU5|NUOC_NITEU RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|30180772|emb|CAD85686.1| Respiratory-chain NADH dehydrogenase 30 Kd subunit [Nitrosomonas
europaea ATCC 19718]
Length = 206
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 112/210 (53%), Gaps = 24/210 (11%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++E L + ++GEL+L V DL + LRD F +ID
Sbjct: 1 MTNSRLEKLAADLQRILGDRQIDISCALGELTLLVHSRDLPDIAEVLRDHQDLGFDTLID 60
Query: 60 LCGVDFLSR-----------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIY 106
LCGVDF RF VVYH LS K+N RLRV++ + V S++ ++
Sbjct: 61 LCGVDFSEYSTDTHAGYKREDRRFAVVYHLLSVKHNHRLRVRVFAEDNEFPMVDSVMPVW 120
Query: 107 PGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV 166
P A+WFERE +D++GI F HPDLRRILTDYGF G+P RKDFP++G VE+ YD K+VV
Sbjct: 121 PSANWFEREAFDLFGIIFNNHPDLRRILTDYGFIGNPFRKDFPLSGHVEMRYDPDQKRVV 180
Query: 167 YRPVELMQEHRDYDFLSPWEGVNSLFAKED 196
Y+PV + P E + +E
Sbjct: 181 YQPVTIE----------PREITPYVIREEQ 200
>gi|329118900|ref|ZP_08247595.1| NADH-quinone oxidoreductase subunit C [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464928|gb|EGF11218.1| NADH-quinone oxidoreductase subunit C [Neisseria bacilliformis ATCC
BAA-1200]
Length = 196
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
DL + + GE++++ + + + LRD F ++DLCGVD+
Sbjct: 4 NDLHAAASRILGDKASNIILAFGEVTVECRAEHYLDVMTTLRDHEELHFELLVDLCGVDY 63
Query: 66 LSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+ N+ V LS K N+R+RV++ + V S+V +Y ADW+ERE +
Sbjct: 64 STYKNQAWQGKRFAAVSQLLSVKNNQRIRVRVWADDDGFPVVESVVPVYNSADWYEREAF 123
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DMYGI F HPDLRRILTDYGF GHP RKDFPV+G+VE+ YD+ K+V+Y+PV +
Sbjct: 124 DMYGIIFNNHPDLRRILTDYGFVGHPFRKDFPVSGYVEMRYDEAEKRVIYQPVTIE---- 179
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 180 ------PREITPRVVREEN 192
>gi|302499495|ref|XP_003011743.1| hypothetical protein ARB_01971 [Arthroderma benhamiae CBS 112371]
gi|291175296|gb|EFE31103.1| hypothetical protein ARB_01971 [Arthroderma benhamiae CBS 112371]
Length = 174
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 78/159 (49%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI 102
+FLRD + + D+ VDF +R RF+VVY+ LS ++N R+RVK E VPSI
Sbjct: 1 MTFLRDHTAAEYTQVSDITAVDFPTREYRFEVVYNLLSVRHNSRIRVKTYADEATPVPSI 60
Query: 103 VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+Y GA WFEREV+DM+G+FF GHPDLRRI+TDYGF+GHPLRKDFP++G+ E+ YD++
Sbjct: 61 TSLYDGALWFEREVYDMFGVFFTGHPDLRRIMTDYGFDGHPLRKDFPLSGYTEIRYDEEK 120
Query: 163 KKVVYRPVELMQEHRDYD-FLSPWEGVNSLFAKEDSKDD 200
K++V P+EL Q R+++ S WEG+ + D+
Sbjct: 121 KRIVVEPLELTQAFRNFEGGSSAWEGIGQGI--DRKPDN 157
>gi|157825616|ref|YP_001493336.1| NADH dehydrogenase subunit C [Rickettsia akari str. Hartford]
gi|157799574|gb|ABV74828.1| NADH dehydrogenase subunit C [Rickettsia akari str. Hartford]
Length = 207
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ + + + S + + L+ V+ L+ L++ F + DL G
Sbjct: 2 TLDKFIEKLADKSSILITPVMVK-DYLAYKVELNFLLPFLKALKESAELRFTVLTDLFGA 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF R RF+VVY+ LS K N+RL +K+ ++E +++PS + I+ A W+EREV+DMYG+
Sbjct: 61 DFPKRDKRFEVVYNLLSLKLNKRLIIKVYISEEETIPSAMNIFSTACWYEREVYDMYGVN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F+G+ D RRILTDY F+GHPLRKDFP+TG+ ++ YD+++K+V Y PV E+R++DF S
Sbjct: 121 FDGNDDKRRILTDYEFDGHPLRKDFPLTGYTQVKYDEQLKQVAYEPVNCDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSK 198
W + ++
Sbjct: 181 HWHSQTYVLPGDEKA 195
>gi|261364349|ref|ZP_05977232.1| NADH-quinone oxidoreductase chain 5 [Neisseria mucosa ATCC 25996]
gi|288567613|gb|EFC89173.1| NADH-quinone oxidoreductase chain 5 [Neisseria mucosa ATCC 25996]
Length = 197
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I L + +V ++++GE++++ VS+ + LRD F ++DLC
Sbjct: 1 MASIHKLYETVVRVLGNQASKVISALGEITVECLPEHYVSIMTALRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V +Y ADW+E
Sbjct: 61 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVPVYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+PV +
Sbjct: 121 REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|11466593|ref|NP_066483.1| NADH dehydrogenase subunit 9 [Rhodomonas salina]
gi|10444180|gb|AAG17754.1|AF288090_30 NADH dehydrogenase subunit 9 [Rhodomonas salina]
Length = 188
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 116/180 (64%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
++ +++ S + S+ L + + L + SFL+++ CCF ++D+ +DFL
Sbjct: 8 NIFEFLEYSLHNYILIVKKSINGLVVKIVKSKLKEILSFLKNNEFCCFKMLLDIYAIDFL 67
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
R+NRF + Y S KYN L ++ ++ E SV SI +Y +W EREVWDM GIFF+
Sbjct: 68 QRANRFVLNYLLRSLKYNYFLTLQFSLNENSSVDSITYLYKNGNWVEREVWDMNGIFFDN 127
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
HPDLRRILTDYGFEG PLRKDFP++GF E+ YDD K+++ +EL QE R ++F SPW+
Sbjct: 128 HPDLRRILTDYGFEGFPLRKDFPISGFKEIRYDDSQKRIISEQIELAQEFRLFNFESPWK 187
>gi|11467084|ref|NP_042560.1| NADH dehydrogenase, subunit 9 [Acanthamoeba castellanii]
gi|3914188|sp|Q37383|NDUS3_ACACA RecName: Full=NADH-ubiquinone oxidoreductase subunit 9
gi|562065|gb|AAD11853.1| NADH dehydrogenase, subunit 9 [Acanthamoeba castellanii]
Length = 195
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 113/192 (58%), Gaps = 6/192 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGE---LSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M RKI + + ++ + E L V+ + +L L+ F +
Sbjct: 7 MSRKIY-YIKLLTGLYKKFIKALIVKKNESNNAYLLVETANFYNLVFSLQRSSLTQFKVL 65
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVW 117
D+C VD+ + +RF++ Y+ S KYN R+ +K + SI ++ A+W ERE W
Sbjct: 66 NDVCIVDYPEKIDRFELSYNLSSIKYNFRIFIKTYTSAYVP--SISTLFNSANWIERECW 123
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DM+G+FF HPDLRRILTDYGFEG PLRKDFP+TG++E+ YDD+ +VY P+EL QE+R
Sbjct: 124 DMFGVFFTNHPDLRRILTDYGFEGFPLRKDFPLTGYIEIRYDDEKANIVYEPLELSQEYR 183
Query: 178 DYDFLSPWEGVN 189
++F SPWE +
Sbjct: 184 LFNFTSPWEKIK 195
>gi|239816481|ref|YP_002945391.1| NADH (or F420H2) dehydrogenase, subunit C [Variovorax paradoxus
S110]
gi|239803058|gb|ACS20125.1| NADH (or F420H2) dehydrogenase, subunit C [Variovorax paradoxus
S110]
Length = 203
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 107/197 (54%), Gaps = 18/197 (9%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L I + + ++GE+++ V + LRD P C F +IDLCG+D+
Sbjct: 11 LRATIAETLGARAKSVTLALGEVTVVVAADAYIEAAMLLRDAPGCRFEQLIDLCGMDYSD 70
Query: 68 R------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDM 119
R+ VV H LS N+R+R+K+ S+ ++ A WFERE +D+
Sbjct: 71 YREGEWQGERYGVVTHLLSVSLNQRVRLKVFAPNEDLPVVDSLQPVWNAATWFEREAFDL 130
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI FEGH DLRRILTDYGF GHP RKDFPV+G VE+ YD++ K+VVY+PV +
Sbjct: 131 YGIVFEGHDDLRRILTDYGFIGHPFRKDFPVSGHVEMRYDEEQKRVVYQPVSIE------ 184
Query: 180 DFLSPWEGVNSLFAKED 196
P E + +++
Sbjct: 185 ----PREITPRVIREDN 197
>gi|54606793|dbj|BAD66816.1| NADH dehydrogenase subunit 9 [Beta vulgaris subsp. vulgaris]
Length = 192
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 79/148 (53%), Positives = 104/148 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ E +
Sbjct: 39 FKLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTCADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|224143075|ref|XP_002335983.1| predicted protein [Populus trichocarpa]
gi|222837161|gb|EEE75540.1| predicted protein [Populus trichocarpa]
Length = 190
Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 80/155 (51%), Positives = 107/155 (69%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNSDYLFQLLCFLKFHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRIFPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|742345|prf||2009372A NADH dehydrogenase:SUBUNIT=9
Length = 192
Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 78/148 (52%), Positives = 104/148 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+R++ E +
Sbjct: 39 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTCADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|88606931|ref|YP_505116.1| NADH dehydrogenase I, C subunit [Anaplasma phagocytophilum HZ]
gi|88597994|gb|ABD43464.1| NADH dehydrogenase I, C subunit [Anaplasma phagocytophilum HZ]
Length = 188
Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Query: 1 MVRKIEDLGD-YIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M IE + +I + + G L ++ + LRDDP + D
Sbjct: 1 MSLDIEPVASSHIQELLQTDIVLRQD--GVLQCYLEAQSIRDNLITLRDDPKTKLRVLTD 58
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ VD+ ++ +RF+VVY LS YN R+ K+A+ EG +PS+ ++ A WFEREV+DM
Sbjct: 59 IFAVDYHNKKSRFEVVYMLLSLVYNIRVCCKVALTEGSIIPSVTSVFGSAGWFEREVYDM 118
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YGI F HPDLRRILTDYGF GHP+ KDFP+TG+ E+ YD + KV Y+PV+L Q R +
Sbjct: 119 YGIEFSDHPDLRRILTDYGFRGHPMLKDFPLTGYEEIRYDFRKGKVAYQPVDLQQNFRLF 178
Query: 180 DFLSPWEGVN 189
+ +SPW+G
Sbjct: 179 NSMSPWKGYK 188
>gi|302879340|ref|YP_003847904.1| NADH (or F420H2) dehydrogenase, subunit C [Gallionella
capsiferriformans ES-2]
gi|302582129|gb|ADL56140.1| NADH (or F420H2) dehydrogenase, subunit C [Gallionella
capsiferriformans ES-2]
Length = 198
Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 18/203 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M L + + S + +GE ++ V D++ + + LRD + F + DL
Sbjct: 1 MTTDKISLREALEALLSDQLLSVQERLGETTIVVRAVDMLPVLTKLRDAENLQFTQMTDL 60
Query: 61 CGVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
CG+D+ VVY LS +NRRLRV+I E + S+ ++ GA+WF
Sbjct: 61 CGMDYSEYGEGAWEGRRFAVVYQLLSVVHNRRLRVRIFAEEDDFPVLASVTPVWAGANWF 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D++GI F GHPDLRRILTDYGF G+P RKDFP++G VE+ YD + ++VVY+PV +
Sbjct: 121 EREAFDLFGIIFTGHPDLRRILTDYGFVGNPFRKDFPISGHVEMRYDAEQQRVVYQPVTV 180
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + +E
Sbjct: 181 E----------PREVTPRIIREE 193
>gi|261378538|ref|ZP_05983111.1| NADH-quinone oxidoreductase chain 5 [Neisseria cinerea ATCC 14685]
gi|269145088|gb|EEZ71506.1| NADH-quinone oxidoreductase chain 5 [Neisseria cinerea ATCC 14685]
Length = 197
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 18/203 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ I++L + + ++++GE++++ VS+ + LRD F ++DLC
Sbjct: 1 MASIQNLYETVSRVLGNQASKVISALGEITVECLPEHYVSVMTTLRDHEELHFELLVDLC 60
Query: 62 GVDFLSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFE 113
GVD+ + N VV LS K N+R+RV++ V++ V S+V +Y ADW+E
Sbjct: 61 GVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVPVYNSADWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D+YGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD++ K+V+Y+ V +
Sbjct: 121 REAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQSVTIE 180
Query: 174 QEHRDYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 181 ----------PREITPRIVREEN 193
>gi|121609760|ref|YP_997567.1| NADH (or F420H2) dehydrogenase subunit C [Verminephrobacter
eiseniae EF01-2]
gi|218534345|sp|A1WLP2|NUOC_VEREI RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|121554400|gb|ABM58549.1| NADH (or F420H2) dehydrogenase, subunit C [Verminephrobacter
eiseniae EF01-2]
Length = 203
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 22/211 (10%)
Query: 1 MVRKI----EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M+ + E L D+I + +R ++ E+++ + D LRDDP C F
Sbjct: 1 MMTAVAIRPERLRDHIAAALGARLRQITLALEEVTVVLAAADYFDAMRVLRDDPVCRFEQ 60
Query: 57 IIDLCGVDFLSR------SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPG 108
+IDLC VD+ + R+ VV H LS N+RLRVK+ + PS+ G++
Sbjct: 61 LIDLCAVDYSTYADAVQQGPRYCVVAHLLSVSLNQRLRVKVFCPDDDFPLLPSVCGLWNS 120
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
A+W+ERE +D++GI F+GH DLRRILTDYGF GHP RKDFP++G V++ YD ++++VVY
Sbjct: 121 ANWYEREAFDLFGILFDGHDDLRRILTDYGFIGHPFRKDFPLSGHVQMRYDAELRRVVYE 180
Query: 169 PVELMQEHRDYDFLSPWEGVNSLFAKEDSKD 199
PV + P E + ++ D
Sbjct: 181 PVSIE----------PREITPRIIREDHYAD 201
>gi|15054572|gb|AAK82657.1|AF276428_1 NADH dehydrogenase subunit 9 [Beta vulgaris subsp. maritima]
Length = 206
Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 79/148 (53%), Positives = 104/148 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ E +
Sbjct: 39 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTCADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQELRYFDFASPWEQ 186
>gi|255590759|ref|XP_002535359.1| NADH-ubiquinone oxidoreductase mitochondrial precursor, putative
[Ricinus communis]
gi|223523367|gb|EEF27025.1| NADH-ubiquinone oxidoreductase mitochondrial precursor, putative
[Ricinus communis]
Length = 169
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 79/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 11 DTNSDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTS 70
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A W+EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 71 ADEVTRISPVVSLFPSAGWWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 130
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 131 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 165
>gi|260223140|emb|CBA33406.1| NADH-quinone oxidoreductase subunit C [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 197
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 18/196 (9%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ V+ ++GE+++ V + LR P C F +IDLCGVD+
Sbjct: 7 KAAVEAVLGDKVKHIDIALGEVTVLVSAQHYHAAAEILRTAPGCQFEQLIDLCGVDYSEY 66
Query: 69 S------NRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMY 120
R+ VV H LS N+RLR+K+ + S+ I+ A+WFERE +D++
Sbjct: 67 KEGAYDGPRYAVVSHLLSISLNQRLRLKVMAPDDDMPLVASVNDIWNSANWFEREAFDLF 126
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GI FEGH DLRRILTDYGF GHP RKDFP+TG VE+ YD + +VVY+PV +
Sbjct: 127 GIIFEGHDDLRRILTDYGFIGHPFRKDFPMTGHVEMRYDAEQARVVYQPVTIE------- 179
Query: 181 FLSPWEGVNSLFAKED 196
E + ++
Sbjct: 180 ---AREITPRIIREDK 192
>gi|87043014|ref|YP_492628.1| NADH dehydrogenase subunit 9 [Dictyostelium citrinum]
gi|122000118|sp|Q2LCR4|NDUS3_DICCI RecName: Full=NADH-ubiquinone oxidoreductase subunit 9
gi|84682114|gb|ABC60379.1| NADH dehydrogenase subunit 9 [Dictyostelium citrinum]
Length = 209
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 70/183 (38%), Positives = 114/183 (62%), Gaps = 4/183 (2%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
DLG+ + S G ++ + L + V+ +L+ + FL++ ++D+ +D L
Sbjct: 13 DLGENLRGSIPGLIKKVMYKTQYLEIQVEKKNLLPVLRFLKESSKYQCTMLLDIVCIDCL 72
Query: 67 SRSN----RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ RF ++Y S N R+ + V + + G++ + W ERE+WDM+GI
Sbjct: 73 NIEEIKIGRFKIIYVLNSIYNNTRVHISTYVENNGIIETTSGLFESSVWLEREIWDMFGI 132
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
+FE HPDLRRILTDYGF G+PL+KDFP+TG++E++YD KK++Y+P+ELMQE+R+Y+F
Sbjct: 133 YFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVADKKIIYKPIELMQEYRNYNFG 192
Query: 183 SPW 185
+ W
Sbjct: 193 AVW 195
>gi|1020087|dbj|BAA07214.1| NADH dehydrogenase subunit 9 [Beta trigyna]
Length = 192
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 78/148 (52%), Positives = 105/148 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+R++ + E +
Sbjct: 39 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|157803903|ref|YP_001492452.1| NADH dehydrogenase subunit C [Rickettsia canadensis str. McKiel]
gi|157785166|gb|ABV73667.1| NADH dehydrogenase subunit C [Rickettsia canadensis str. McKiel]
Length = 196
Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 119/196 (60%), Gaps = 1/196 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + +S + G L+ +V+ L+ L+ F + DL G
Sbjct: 2 TLDKLIEELAAKYSILITHITVQ-GYLAYNVEPHFLLLFLKALKKSEELRFTVLTDLFGA 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF R RF+VVY+ LS K N+RL +K+ ++E +S+PS + I+ A W+EREV+DM+G+
Sbjct: 61 DFPERDKRFEVVYNLLSLKLNKRLIIKVQISEKESIPSAMNIFNAACWYEREVYDMFGVN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
FEG+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD K+KKV Y PV+L E+R +DF S
Sbjct: 121 FEGNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDKKLKKVAYEPVDLDIEYRKFDFSS 180
Query: 184 PWEGVNSLFAKEDSKD 199
W + ++
Sbjct: 181 QWHSPTYILPGDEKAK 196
>gi|254796792|ref|YP_003081629.1| NADH-quinone oxidoreductase chain c 1 [Neorickettsia risticii str.
Illinois]
gi|254590039|gb|ACT69401.1| NADH-quinone oxidoreductase chain c 1 [Neorickettsia risticii str.
Illinois]
Length = 186
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY 76
+ V +N+ + +++ LV L S+L C F +ID+ G+D+L R R +VVY
Sbjct: 5 TSKVDALINAPEKCTVNSSLESLVELISYL---SSCGFEQLIDIFGIDYLEREKRIEVVY 61
Query: 77 HFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
L+ K NRR VK++V + VP+ G++ A+WFEREV+DMYG+ FEGHPDLRRILT
Sbjct: 62 LLLNLKRNRRCCVKVSVDPASEKVPTCCGVFSVANWFEREVYDMYGVVFEGHPDLRRILT 121
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
DYGFEG P+ KDFP+TG+ E+ YD + K+VVY V+L Q++R +D L+PW+G+
Sbjct: 122 DYGFEGFPMLKDFPLTGYKEVRYDLESKEVVYEKVDLSQDYRSFDSLTPWKGIGHPSGAF 181
Query: 196 DSKDD 200
D K +
Sbjct: 182 DGKKE 186
>gi|238023161|ref|ZP_04603587.1| hypothetical protein GCWU000324_03087 [Kingella oralis ATCC 51147]
gi|237865544|gb|EEP66684.1| hypothetical protein GCWU000324_03087 [Kingella oralis ATCC 51147]
Length = 195
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 108/197 (54%), Gaps = 18/197 (9%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
DL + + GE++L+ + +SL LRD F ++DLCGVD+
Sbjct: 5 DLQAACATLLGDKASNIILAYGEITLECQPKNYLSLMQTLRDHDDLHFEQLVDLCGVDYS 64
Query: 67 SRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWD 118
+ N+ V LS K N+R+RV++ + PS+V +Y ADW+ERE +D
Sbjct: 65 TYQNQAWQGKRFAAVSQLLSIKNNQRIRVRVWADDDDMPIVPSVVSLYNSADWYEREAFD 124
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
MYGI F HPDLRRILTDYGF GHP RKDFPV+G+VE+ YD+ K+V+Y+PV +
Sbjct: 125 MYGIIFNEHPDLRRILTDYGFVGHPFRKDFPVSGYVEMRYDEAEKRVIYQPVTIE----- 179
Query: 179 YDFLSPWEGVNSLFAKE 195
P E + +E
Sbjct: 180 -----PREITPRVVREE 191
>gi|242023154|ref|XP_002432001.1| NADH-ubiquinone oxidoreductase 30 kDa subunit, putative [Pediculus
humanus corporis]
gi|212517352|gb|EEB19263.1| NADH-ubiquinone oxidoreductase 30 kDa subunit, putative [Pediculus
humanus corporis]
Length = 222
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/170 (42%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 8 LGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
G Y+ V+ S GEL + + ++ + FL+D +C F +++D+ G+D
Sbjct: 41 FGKYVSECLPKYVQMIQMTSQGELEILIAPEGVLPVMQFLKDHHNCQFESLVDIAGMDVP 100
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
R RF+++Y+ LS +YN R+RVK E + S+ +Y ADW+EREVWDMYG++F+
Sbjct: 101 GREYRFEIIYNLLSLRYNSRVRVKTYTDELTPIDSVYEVYRAADWYEREVWDMYGVYFKN 160
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
HPDLRRILTDYGFEGHP R+DFP++G+VE+ YDD+V++VV ++
Sbjct: 161 HPDLRRILTDYGFEGHPQRRDFPLSGYVEVRYDDEVQRVVCESLDKTPAF 210
>gi|117926907|ref|YP_867524.1| NADH (or F420H2) dehydrogenase, subunit C [Magnetococcus sp. MC-1]
gi|117610663|gb|ABK46118.1| NADH dehydrogenase subunit C [Magnetococcus sp. MC-1]
Length = 187
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K++ L + + G L + D +V +RDDP F ID+
Sbjct: 3 SDKLQRLESRVASILPE--LKREWVCGALVVWCDPEQVVDTLRTMRDDPGMNFKLFIDVT 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
V + R F+VVY LS N R+RVK V VPSI G++ ADWFERE+++M+G
Sbjct: 61 AVHYPKREKPFEVVYQLLSVHKNHRIRVKTLVDADTPVPSITGLWKAADWFEREMYEMFG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
I GHPDLRR+L DY F+G PLRKDFPVTG EL YD+ +++V PV L +R++
Sbjct: 121 ILISGHPDLRRLLLDYDFDGFPLRKDFPVTGPFELRYDETQQRIVREPVSLTVPNRNF 178
>gi|292559465|ref|YP_003540833.1| NADH dehydrogenase subunit 9 [Hartmannella vermiformis]
gi|290775718|gb|ADD62217.1| NADH dehydrogenase subunit 9 [Hartmannella vermiformis]
Length = 195
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/170 (42%), Positives = 106/170 (62%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY 76
+ V V + L + ++ SL FL+ F +++D+ G D+ R+ RF+V +
Sbjct: 21 NKWVDAIVVKPCSMILITNSKNMRSLLIFLKFLFDTNFSSLMDIWGSDYPHRNYRFEVNF 80
Query: 77 HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
L+ RL ++++ E + +I +Y A W EREVWDMYG++F GH DLRRILTD
Sbjct: 81 LILNLSLPYRLIIRVSTNEYIPISTISDLYSSAGWLEREVWDMYGVYFSGHKDLRRILTD 140
Query: 137 YGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
YGF G+PLRKDFP+TG+ E+ YDD K+VV P+E+ QE R ++F SPWE
Sbjct: 141 YGFSGYPLRKDFPLTGYTEVRYDDTKKQVVLEPLEISQELRLFNFKSPWE 190
>gi|292571964|gb|ADE29879.1| NADH dehydrogenase I chain C [Rickettsia prowazekii Rp22]
Length = 197
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + F + L+ ++ L+ L++ F + DL GV
Sbjct: 2 TLDKLIEKLAAKFRIVITKVAVK-DHLAYKIEPHFLLPFLKALKESEELRFTVLTDLFGV 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF + RF+VVY+ LS K N+ L +K ++E +S+PS + I A W+E EV+DMYG+
Sbjct: 61 DFPKKEKRFEVVYNLLSLKLNKNLIIKTHISEKESIPSAMQILSAAYWYELEVYDMYGVN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD K++KV Y PV L E+R++DF S
Sbjct: 121 FNGNNDKRRILTDYDFEGHPLRKDFPLTGYTQVKYDKKLEKVTYEPVNLDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSKDD 200
W + + ++ ++
Sbjct: 181 HWHSPSYVLPGDEKAEE 197
>gi|284794748|ref|YP_003412101.1| NADH dehydrogenase subunit 9 [Phaeoceros laevis]
gi|254596068|gb|ACT75309.1| NADH dehydrogenase subunit 9 [Phaeoceros laevis]
Length = 191
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 77/189 (40%), Positives = 112/189 (59%), Gaps = 2/189 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++ ++ + + S E L + L L FL+ + F ID+
Sbjct: 1 MDKQL--FLKSLIATLPKRIHQFKTSKHENILYTNPDYLFELLWFLKHHINTRFQVSIDI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GVD+ SR RF+VV++ LS +YN +RV+ +V+E + +V I+P A W+EREVWDM+
Sbjct: 59 RGVDYSSRKRRFEVVHNSLSIRYNSCIRVESSVSEITPICLVVNIFPSAGWWEREVWDMF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
G + HPD RRI DYGFEGHPLRKD ++G+ E+ YDD K+VV P+E+ QE +D
Sbjct: 119 GAYSSNHPDSRRISIDYGFEGHPLRKDLSLSGYFEVRYDDSEKRVVSEPIEMTQESCYFD 178
Query: 181 FLSPWEGVN 189
F SPWE +
Sbjct: 179 FASPWEIAS 187
>gi|291613540|ref|YP_003523697.1| NADH (or F420H2) dehydrogenase, subunit C [Sideroxydans
lithotrophicus ES-1]
gi|291583652|gb|ADE11310.1| NADH (or F420H2) dehydrogenase, subunit C [Sideroxydans
lithotrophicus ES-1]
Length = 209
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 109/192 (56%), Gaps = 19/192 (9%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + L + +FS V +GEL+L + D++++ + LRDD F ++D+
Sbjct: 1 MATDLNILSANLNEAFSVKVVSLEERLGELTLVIKAHDMLAVFTRLRDDADLRFEELVDV 60
Query: 61 CGVDF-----------------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PS 101
CG+D+ RF VYH LS +N RLRV++ + S
Sbjct: 61 CGIDYSTYGSELCEDGKYLPDEPRAGPRFAAVYHLLSITHNIRLRVRVFADDDDMPVLNS 120
Query: 102 IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
+ GI+P A+W+ERE +D+YGI F GHPDLRRILTDYGF G+P RKDFP++G VE+ YD
Sbjct: 121 VTGIWPSANWYEREAFDLYGIIFVGHPDLRRILTDYGFVGNPFRKDFPLSGTVEMRYDAA 180
Query: 162 VKKVVYRPVELM 173
++V+Y PV +
Sbjct: 181 QQRVIYEPVTVE 192
>gi|323649874|ref|YP_004237248.1| NADH dehydrogenase subunit 9 [Ricinus communis]
gi|322394254|gb|ADW96011.1| NADH dehydrogenase subunit 9 [Ricinus communis]
Length = 190
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 79/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNSDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A W+EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGWWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|15604223|ref|NP_220739.1| NADH dehydrogenase subunit C [Rickettsia prowazekii str. Madrid E]
gi|6647679|sp|Q9ZDH3|NUOC_RICPR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|3860915|emb|CAA14815.1| NADH DEHYDROGENASE I CHAIN C (nuoC) [Rickettsia prowazekii]
Length = 197
Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + F + L+ ++ L+ L++ F + DL GV
Sbjct: 2 TLDKLIEKLAAKFRIVITKVAVK-DHLAYKIEPHFLLPFLKALKESEELRFTVLTDLFGV 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF + RF+VVY+ LS K N+ L +K ++E +S+PS + I A W+E EV+DMYG+
Sbjct: 61 DFPKKEKRFEVVYNLLSLKLNKNLIIKTHISEKESIPSAMQILSAAYWYELEVYDMYGVN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD K++KV Y PV L E+R++DF S
Sbjct: 121 FNGNNDKRRILTDYDFEGHPLRKDFPLTGYTQVKYDKKLEKVTYEPVNLDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSKDD 200
W + + ++ ++
Sbjct: 181 HWHSPSYVLPGDEKTEE 197
>gi|82702222|ref|YP_411788.1| NADH dehydrogenase subunit C [Nitrosospira multiformis ATCC 25196]
gi|123544731|sp|Q2YA25|NUOC_NITMU RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|82410287|gb|ABB74396.1| NADH dehydrogenase subunit C [Nitrosospira multiformis ATCC 25196]
Length = 205
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 13/185 (7%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++E L + N + + + +L + V +L+ + S LRD P F +IDLC
Sbjct: 3 STRLETLALCLQNVLADKLANVDQQLDQLIITVSPVNLLPVMSVLRDHPELGFEMLIDLC 62
Query: 62 GVDFLSRS-----------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPG 108
GVD+ RF VVYH LS ++NRR+RVK + V S++ I+P
Sbjct: 63 GVDYSIYGVEPTSEQGREGKRFAVVYHLLSIRHNRRVRVKAFPEDDEFPVVVSVIDIWPS 122
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
A+WFERE +D+YGI F GHPDLRRILTDYGF G+P RKDFP++G VE+ YD ++VVY+
Sbjct: 123 ANWFEREAFDLYGIVFTGHPDLRRILTDYGFIGNPFRKDFPLSGNVEMRYDPDQQRVVYQ 182
Query: 169 PVELM 173
PV +
Sbjct: 183 PVTIE 187
>gi|1020088|dbj|BAA07215.1| NADH dehydrogenase subunit 9 [Beta webbiana]
Length = 192
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 78/148 (52%), Positives = 105/148 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+R++ + E +
Sbjct: 39 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVRLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|80978900|gb|ABB54699.1| NADH dehydrogenase subunit 9 [Brassica oleracea var. botrytis]
Length = 190
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 79/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ F HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|74325198|ref|YP_316618.1| NADH dehydrogenase subunit 9 [Thalassiosira pseudonana]
gi|74100264|gb|AAZ99425.1| NADH dehydrogenase subunit 9 [Thalassiosira pseudonana]
Length = 184
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ + I + F + + L + V L + F + F +
Sbjct: 1 MNSQL--IVKSIKDLFQLCPLEKIQFYNQDLVIIVKPNLLYDILLFFKYHVSYQFDILTC 58
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ + RF +VY LS +YN RLRVK E V S +Y A W+E E+WDM
Sbjct: 59 ITGVDYPNNKYRFKLVYDLLSIRYNIRLRVKTFTHELFGVDSCDKLYFTAGWYECEIWDM 118
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
YG+FF+ H +L+RILTDYGFEGHPLRKDFP++GFVE+ Y++ K+V+ +EL QE+R +
Sbjct: 119 YGVFFKNHSNLKRILTDYGFEGHPLRKDFPLSGFVEMKYNETEKRVINESIELCQEYRTF 178
Query: 180 DFLSPW 185
FLSPW
Sbjct: 179 KFLSPW 184
>gi|51473549|ref|YP_067306.1| NADH dehydrogenase subunit C [Rickettsia typhi str. Wilmington]
gi|81390151|sp|Q68X18|NUOC_RICTY RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|51459861|gb|AAU03824.1| NADH dehydrogenase (ubiquinone) subunit C [Rickettsia typhi str.
Wilmington]
Length = 197
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 115/196 (58%), Gaps = 1/196 (0%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+++L D + + L+ ++ L+ L++ F + DL GV
Sbjct: 2 TLDELIDKLAAKSRILITKVTVK-DHLAYKIEPHFLLPFLKALKESEELRFTVLTDLFGV 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
DF R RF++VY+ LS K N+ L +K ++E +S+PS + I A W+E EV+DMYG+
Sbjct: 61 DFPKREKRFEIVYNLLSLKLNKNLIIKTNISEKESIPSAMKILSAACWYELEVYDMYGVN 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD K+KK+ Y PV L E+R++DF S
Sbjct: 121 FNGNNDKRRILTDYDFEGHPLRKDFPLTGYTQVKYDKKLKKIAYEPVNLDIEYREFDFSS 180
Query: 184 PWEGVNSLFAKEDSKD 199
W + + ++ +
Sbjct: 181 HWHSPSYILPGDEKAE 196
>gi|81176530|ref|YP_398414.1| nad9 [Triticum aestivum]
gi|416536|emb|CAA49376.1| 30 kDa subunit of complex I NADH dehydrogenase [Triticum aestivum]
gi|78675254|dbj|BAE47679.1| nad9 [Triticum aestivum]
gi|169649064|gb|ACA62625.1| nad9 [Triticum aestivum]
Length = 287
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 76/148 (51%), Positives = 100/148 (67%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 136 FPLLCFLKWHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 195
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM G+ HPDLRRI TDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 196 SPVVSLFPSAGRWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDFPLSGYVEVRYD 255
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 256 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 283
>gi|256821517|ref|YP_003145480.1| NADH (or F420H2) dehydrogenase subunit C [Kangiella koreensis DSM
16069]
gi|256795056|gb|ACV25712.1| NADH (or F420H2) dehydrogenase, subunit C [Kangiella koreensis DSM
16069]
Length = 231
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 76/200 (38%), Positives = 105/200 (52%), Gaps = 32/200 (16%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L + + N F + + GE++++V DL+ + LRD F +IDL VD+
Sbjct: 3 ESLVNTLGNIFGDKLIACDKAFGEVTIEVAQDDLLEVAKELRDQDELKFEQLIDLTVVDY 62
Query: 66 LSRSNRFD-------------------------------VVYHFLSPKYNRRLRVKIAVA 94
++ VVYH LS +N RLRVK V
Sbjct: 63 MTYGQDEWATTEATGTGFGRAREAISSPVHQEWQRDRFAVVYHLLSISHNWRLRVKCFVK 122
Query: 95 EGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
E + + ++ ++ A+W+ERE +D++GI FEGHPDLRRILTDYGF GHP RKDFP+ G
Sbjct: 123 ENRPMLPSVIPVWNSANWYEREAFDLFGILFEGHPDLRRILTDYGFIGHPFRKDFPLIGN 182
Query: 154 VELHYDDKVKKVVYRPVELM 173
VEL YD K K+ VY PV +
Sbjct: 183 VELRYDAKQKRCVYEPVSIE 202
>gi|224020983|ref|YP_002608216.1| NADH dehydrogenase subunit 9 [Carica papaya]
gi|170522395|gb|ACB20505.1| NADH dehydrogenase subunit 9 [Carica papaya]
Length = 190
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 79/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ F HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGLSFINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|325267316|ref|ZP_08133978.1| NADH-quinone oxidoreductase subunit C [Kingella denitrificans ATCC
33394]
gi|324981253|gb|EGC16903.1| NADH-quinone oxidoreductase subunit C [Kingella denitrificans ATCC
33394]
Length = 195
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 18/198 (9%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
DL G + + GEL+++ + + LRD F +IDLCGVD+
Sbjct: 5 DLKAACTRILGGKADNIILAFGELTVECRPEHYLDIMQTLRDHAELHFETLIDLCGVDYS 64
Query: 67 SRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWD 118
+ N+ VV LS + N+R+RV++ + V ++ +Y GADW+ERE +D
Sbjct: 65 TYKNQEWHGKRFAVVSQLLSVQNNQRVRVRVWADDDSFPIVHTVTHLYNGADWYEREAFD 124
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
MYGI F HPDLRRILTDYGF GHP RKDFPV+G VE+ YD+ K+V+Y+PV +
Sbjct: 125 MYGIIFNEHPDLRRILTDYGFVGHPFRKDFPVSGHVEMRYDETEKRVIYQPVTIE----- 179
Query: 179 YDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 180 -----PREITPRVVREEN 192
>gi|77166021|ref|YP_344546.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrosococcus oceani
ATCC 19707]
gi|254436376|ref|ZP_05049882.1| NADH dehydrogenase, subunit C subfamily, putative [Nitrosococcus
oceani AFC27]
gi|123593539|sp|Q3J830|NUOC_NITOC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|76884335|gb|ABA59016.1| NADH dehydrogenase subunit C [Nitrosococcus oceani ATCC 19707]
gi|207088066|gb|EDZ65339.1| NADH dehydrogenase, subunit C subfamily, putative [Nitrosococcus
oceani AFC27]
Length = 231
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 111/204 (54%), Gaps = 31/204 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L I F G + F GEL+++V ++C LRD+ + F +IDL
Sbjct: 1 MANSVAELRRRIEGRFDGEIGFCRLERGELTIEVPREFYFAVCKALRDEENFGFEQLIDL 60
Query: 61 CGVDFLSRS------------------------------NRFDVVYHFLSPKYNRRLRVK 90
CGVD++ +RF VV H LS ++N RLRV+
Sbjct: 61 CGVDYMEYGLSDWETKKATVDGFSRAVERRQYKKQAWTRSRFAVVVHLLSVRHNWRLRVR 120
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
V E V ++ ++ +WFERE +D++GI FEGHPDLRRILTDYGF GHP RKDFP
Sbjct: 121 TFVDEEILVAPSVIQLWASVNWFEREAFDLFGILFEGHPDLRRILTDYGFIGHPFRKDFP 180
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
++G VE+ YD + ++V+Y PV +
Sbjct: 181 LSGNVEMRYDPEQQRVIYEPVSIE 204
>gi|332968233|gb|EGK07310.1| NADH-quinone oxidoreductase subunit C [Kingella kingae ATCC 23330]
Length = 195
Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 18/198 (9%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
DL + + E++++ + + + LRD F +++DLCGVD+
Sbjct: 5 DLQAACTEILGKKASKILLAFDEVTIECQPEHYLDIMTTLRDHEDLHFESLVDLCGVDYS 64
Query: 67 SRSNRFD------VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWD 118
+ N V +S K N+R+RV++ + VPS+V +Y GADW+ERE +D
Sbjct: 65 TYKNEAWQGKRFAAVSQLVSVKNNQRVRVRVWAQDDDLPIVPSVVELYNGADWYEREAFD 124
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
MYGI F HPDLRRILTDYGF GHP RKDFP++G+VE+ YD+ K+V+Y+PV +
Sbjct: 125 MYGIIFNEHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDENEKRVIYQPVTIE----- 179
Query: 179 YDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 180 -----PREITPRVVREEN 192
>gi|91776411|ref|YP_546167.1| NADH (or F420H2) dehydrogenase, subunit C [Methylobacillus
flagellatus KT]
gi|122399587|sp|Q1GZL1|NUOC_METFK RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|91710398|gb|ABE50326.1| NADH dehydrogenase subunit C [Methylobacillus flagellatus KT]
Length = 197
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 8/180 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++E L ++ + F S+ E++++ L+ + + LRD F +IDLC
Sbjct: 1 MTRLEQLKQHLQDVFGNSITRLQECRNEVTIECQAPCLLEVANLLRDHKLLKFEQLIDLC 60
Query: 62 GVDFLSRSNRFDVVYHF--------LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFE 113
GVD+ + +S RLRV + +P++V I+P A+WFE
Sbjct: 61 GVDYADYGEGSWSGLRYATVYHFLSVSLNQRLRLRVFAPDDDFPVLPTVVDIWPVANWFE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D++GI +EGHPDLRR+LTDYGF GHP RKDFP+ G VE+ YD + ++VVY+PV +
Sbjct: 121 RESFDLFGIMYEGHPDLRRLLTDYGFVGHPFRKDFPMIGNVEMRYDPERQRVVYQPVTID 180
>gi|114330927|ref|YP_747149.1| NADH dehydrogenase subunit C [Nitrosomonas eutropha C91]
gi|122314157|sp|Q0AHJ8|NUOC_NITEC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|114307941|gb|ABI59184.1| NADH dehydrogenase subunit C [Nitrosomonas eutropha C91]
Length = 206
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 24/216 (11%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +++ L + S +++GEL++ + DL+ + LR+ F ++D
Sbjct: 1 MTDSRVDKLATNLQQVLSDQQVDMSHALGELTILIHSRDLLGIAETLRNHTDLAFDTLVD 60
Query: 60 LCGVDFLSR-----------SNRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIY 106
LCGVD+ RF VVYH LS K+N RLR+++ V + + S++ I+
Sbjct: 61 LCGVDYSEYTTNTHAGYKRGDKRFAVVYHLLSVKHNHRLRIRVFVDDNEFPMLDSVIHIW 120
Query: 107 PGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV 166
P A+W+ERE +D++GI F HPDLRRILTDYGF G+P RKDFP++G +E+ YD + K+V+
Sbjct: 121 PSANWYEREAFDLFGIVFNNHPDLRRILTDYGFIGNPFRKDFPLSGHMEMQYDPEQKRVI 180
Query: 167 YRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDMS 202
Y+P+ + P E + +E + +
Sbjct: 181 YQPITIE----------PREITPYIIREEQYGKEET 206
>gi|292493666|ref|YP_003529105.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrosococcus halophilus
Nc4]
gi|291582261|gb|ADE16718.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrosococcus halophilus
Nc4]
Length = 231
Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 31/204 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + +L + + F G + GEL++ V ++C LRD+ F +IDL
Sbjct: 1 MATGVMELQERVERRFEGEISSCRLDRGELTVQVPRESYFAVCKALRDEEDFAFEQLIDL 60
Query: 61 CGVDFLSRSN------------------------------RFDVVYHFLSPKYNRRLRVK 90
CGVD+L RF V+ H LS ++N RLRV+
Sbjct: 61 CGVDYLEYGVGDWETRKATTQGFSRAVERRQHQEHVWGGLRFAVITHLLSIRHNWRLRVR 120
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
V E V + ++ A+WFERE +D++GI F+GHPDLRRILTDYGF GHP RKDFP
Sbjct: 121 TFVEEEVPVAPSVTELWASANWFEREAFDLFGILFDGHPDLRRILTDYGFIGHPFRKDFP 180
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
++G VE+ YD + ++V+Y PV +
Sbjct: 181 LSGNVEMRYDLEQQRVIYEPVSIE 204
>gi|88812974|ref|ZP_01128217.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrococcus mobilis
Nb-231]
gi|88789752|gb|EAR20876.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrococcus mobilis
Nb-231]
Length = 240
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 44/213 (20%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E L +I + G V + GEL+L V +L+ + LRD+ F +ID+ GVD
Sbjct: 1 MEQLAGHIEQALDGRVSESQIHCGELTLVVKPAELMPVMRVLRDNEAFRFDQLIDITGVD 60
Query: 65 FLSRSNRFDVV------------------------------------------YHFLSPK 82
+ + + YH LS
Sbjct: 61 YAAYGQDEWITEQASATGFSRGVDGFTTGRLGLTGIYGVHEIKSNTGRRFAAVYHLLSVA 120
Query: 83 YNRRLRVKIAVAEGK--SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
N+R+RV+ + + SI I+ ADWFERE +D++GI F+GHPDLRRILTDYGF
Sbjct: 121 LNQRVRVRAFCEDDNFPMLDSITSIWSCADWFEREAFDLFGIIFDGHPDLRRILTDYGFV 180
Query: 141 GHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
GHP RKDFP+ G VE+ YD+ ++VVY PV +
Sbjct: 181 GHPFRKDFPLIGNVEVRYDEDRQRVVYEPVSIA 213
>gi|253807638|gb|ACT36216.1| NADH dehydrogenase subunit 9 [Helicosporidium sp. ex Simulium
jonesi]
Length = 259
Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats.
Identities = 72/167 (43%), Positives = 103/167 (61%), Gaps = 9/167 (5%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR 85
+ V L+S FL++ + + +ID+ VD+ S+ NRF++VY+ LS +YN
Sbjct: 88 KFNQAIFYVYPQYLLSFLDFLKNHMNTQYKVLIDITAVDYPSKYNRFEIVYNLLSVQYNN 147
Query: 86 RLRVKIAV---------AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
R+ VK V + V S +Y A W+EREVWDM+GIFF+ +PDLRRILTD
Sbjct: 148 RIIVKTIVDEYSNINSQNYSQCVDSSQSLYSCATWYEREVWDMFGIFFKNNPDLRRILTD 207
Query: 137 YGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
YGF GHPLRKDFP++G+ E+ YDD K+V+ +E QE R +D+ +
Sbjct: 208 YGFSGHPLRKDFPLSGYKEVRYDDSEKRVITESIECSQEFRSFDYET 254
>gi|13449296|ref|NP_085479.1| NADH dehydrogenase subunit 9 [Arabidopsis thaliana]
gi|6851007|emb|CAA69753.3| NADH dehydrogenase subunit 9 [Arabidopsis thaliana]
Length = 190
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ F HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+V++ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVQVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|149022593|gb|EDL79487.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 248
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ + EL + + ++ +FL+D + F ++ DL
Sbjct: 56 KRLSAFGEYVAEILPKYVQQVQVTCFDELEICIHPDGVIPTITFLKDHTNAQFKSLADLT 115
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E ++ SIV ++ A+W+EREVWDM+G
Sbjct: 116 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTAIDSIVSVHIAANWYEREVWDMFG 175
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+FF HPDLRRILTDYGFEGHP RKDFP+TG+VE+++
Sbjct: 176 VFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVEIYF 212
>gi|11465870|ref|NP_066419.1| NADH dehydrogenase subunit 9 [Ochromonas danica]
gi|10505203|gb|AAG18385.1|AF287134_10 NADH dehydrogenase subunit 9 [Ochromonas danica]
Length = 181
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 74/165 (44%), Positives = 105/165 (63%)
Query: 21 RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS 80
+ +++ E+ + +L+ L+ + + + + G+DF S RF + Y LS
Sbjct: 17 QCFIHNNDEVCFIISHENLLHALKILKLHINYQYKLLTCISGIDFFSLKYRFCIAYDLLS 76
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
N R+RVKI V E + S V IY A+W+ERE+WDMYGI+F HPDLRRILTDYGFE
Sbjct: 77 LVNNSRVRVKIFVNEITPIESCVEIYKNANWWEREIWDMYGIYFYNHPDLRRILTDYGFE 136
Query: 141 GHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
G+PLRKDFP++GFVEL YD K+VV P++L QE+R +++ W
Sbjct: 137 GYPLRKDFPLSGFVELRYDSIKKRVVLEPLQLAQEYRLFNYEIQW 181
>gi|9280606|gb|AAF86491.1|AF279444_1 NADH dehydrogenase subunit 9 [Lupinus albus]
Length = 190
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 77/155 (49%), Positives = 103/155 (66%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+ L L FL+ + ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 YTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|153799814|gb|ABS50638.1| NADH dehydrogenase subunit 9 [Arabidopsis thaliana]
gi|153799816|gb|ABS50639.1| NADH dehydrogenase subunit 9 [Arabidopsis thaliana]
Length = 176
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/153 (50%), Positives = 103/153 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 24 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTS 83
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ F HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 84 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSG 143
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
+VE+ YDD K+VV P+E+ QE R +DF SPW
Sbjct: 144 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPW 176
>gi|57014008|ref|YP_173479.1| NADH dehydrogenase subunit 9 [Nicotiana tabacum]
Length = 190
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKQRFEVVYNLLSIRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|325983287|ref|YP_004295689.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrosomonas sp. AL212]
gi|325532806|gb|ADZ27527.1| NADH (or F420H2) dehydrogenase, subunit C [Nitrosomonas sp. AL212]
Length = 207
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 23/203 (11%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L + + EL++ V+ D++ + LRDD F +IDLCG+D+
Sbjct: 7 ETLAASLRGLLQNKLINLQMQRDELTIVVNAEDILEVSKVLRDDSALMFDTLIDLCGIDY 66
Query: 66 LSRSN-----------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWF 112
L N RF V+YH LS N+RLRV++ +V S+ ++P A+WF
Sbjct: 67 LIYGNDLSAKYDLKDRRFAVIYHLLSVVRNQRLRVRVLAENNEFPAVHSVTEVWPAANWF 126
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE +D+YGI F HPDLRRILTDYGF G+P RKDFP+TG+VE+ YD++ ++V+Y+PV +
Sbjct: 127 EREAFDLYGIVFPDHPDLRRILTDYGFIGNPFRKDFPITGYVEMRYDEQQRRVIYQPVSI 186
Query: 173 MQEHRDYDFLSPWEGVNSLFAKE 195
P E + +E
Sbjct: 187 E----------PREITPLVIREE 199
>gi|7524986|ref|NP_050084.1| NADH dehydrogenase subunit 9 [Dictyostelium discoideum]
gi|128861|sp|P22237|NDUS3_DICDI RecName: Full=NADH-ubiquinone oxidoreductase subunit 9
gi|12910|emb|CAA36903.1| unnamed protein product [Dictyostelium discoideum]
gi|4958889|dbj|BAA78066.1| NADH dehydrogenase subunit 9 [Dictyostelium discoideum]
Length = 209
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 69/183 (37%), Positives = 115/183 (62%), Gaps = 4/183 (2%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+LG+++ S G V+ + L + V+ ++++ +L++ ++D+ VD L
Sbjct: 13 NLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCL 72
Query: 67 SRSN----RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ RF ++Y S N R+ + V + + G++ + W ERE+WDM+GI
Sbjct: 73 NIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGI 132
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFL 182
+FE HPDLRRILTDYGF G+PL+KDFP+TG++E++YD KK++Y+P+ELMQE+R+Y+F
Sbjct: 133 YFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFG 192
Query: 183 SPW 185
+ W
Sbjct: 193 AVW 195
>gi|148695559|gb|EDL27506.1| mCG13496, isoform CRA_b [Mus musculus]
Length = 244
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 71/157 (45%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S + EL + + ++ +FLRD + F ++ DL
Sbjct: 55 KQLSAFGEYVAEILPKYVQQVQVSCLDELEICIHPDGVIPTLTFLRDHTNAQFKSLADLT 114
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+EREVWDM+G
Sbjct: 115 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFG 174
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+FF HPDLRRILTDYGFEGHP RKDFP+TG+VE+H+
Sbjct: 175 VFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVEIHF 211
>gi|9280608|gb|AAF86492.1|AF279445_1 NADH dehydrogenase subunit 9 [Lupinus angustifolius]
gi|9280610|gb|AAF86493.1|AF279446_1 NADH dehydrogenase subunit 9 [Lupinus luteus]
Length = 190
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 78/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|187764084|ref|YP_001876533.1| NADH dehydrogenase subunit 9 [Dictyostelium fasciculatum]
gi|160688792|gb|ABX45207.1| NADH dehydrogenase subunit 9 [Dictyostelium fasciculatum]
Length = 207
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 114/198 (57%), Gaps = 8/198 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M R ++ +G + ++ V L++ V+ DL+++ + L+++ + ++D+
Sbjct: 6 MKRNMQ-IGLLLSEMCPKVIKKVVYKPNMLNVFVESKDLINILTILQNNTMFQYKMLLDI 64
Query: 61 CGVDFLSRSNR----FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREV 116
VD L+ F ++Y S N RL + + + + + Y A W ERE+
Sbjct: 65 VVVDCLNIDENKKGRFKLLYVLHSIYNNHRLNIVTYLNNNEIIKTSSLNYSSAVWLEREI 124
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
WDMYGI+FE HPDLRRILTDYGF +PLRKDFP+TG++E++YD KK++Y+ +ELMQE
Sbjct: 125 WDMYGIYFESHPDLRRILTDYGFSWYPLRKDFPLTGYLEVYYDINDKKIIYKSIELMQEF 184
Query: 177 RDYDFLSPW---EGVNSL 191
R+Y+F W E +
Sbjct: 185 RNYEFGKSWGDFEQKTYI 202
>gi|78485164|ref|YP_391089.1| NADH (or F420H2) dehydrogenase, subunit C [Thiomicrospira crunogena
XCL-2]
gi|123555686|sp|Q31HF8|NUOC_THICR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|78363450|gb|ABB41415.1| NADH dehydrogenase chain C [Thiomicrospira crunogena XCL-2]
Length = 223
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 110/208 (52%), Gaps = 37/208 (17%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + DL I + ++ + + EL++++ +S + L+ F +ID+
Sbjct: 1 MKQSVLDLQATIQETLGDAIVVSDIKLDELTVELAPEQSLSALTKLK--EKLGFDQLIDV 58
Query: 61 CGVDFLSRSNRFD---------------------------------VVYHFLSPKYNRRL 87
CGVD+L+ + VVYH LS + NRR+
Sbjct: 59 CGVDYLAFGDVTWETRKATNSGFSRGVFDFAEEDGEADTNIPRRFAVVYHLLSVENNRRV 118
Query: 88 RVKIAVA--EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
RVK+ + V S+V ++ ADWFERE +D++GI F GHPDLRRILTDYGF GHPLR
Sbjct: 119 RVKVYPEDTQMPMVDSVVSVWNCADWFEREAFDLFGILFNGHPDLRRILTDYGFVGHPLR 178
Query: 146 KDFPVTGFVELHYDDKVKKVVYRPVELM 173
KDFP+TG VE+ YD + +VVY PV +
Sbjct: 179 KDFPLTGHVEMRYDAEKGRVVYEPVTIE 206
>gi|323149051|ref|YP_004222820.1| NADH dehydrogenase subunit 9 [Vigna radiata]
gi|308206757|gb|ADO19894.1| NADH dehydrogenase subunit 9 [Vigna radiata]
Length = 190
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 78/155 (50%), Positives = 103/155 (66%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D L L FL+ + ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTKTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|9280604|gb|AAF86490.1|AF279443_1 NADH dehydrogenase subunit 9 [Lupinus mutabilis]
Length = 190
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 78/155 (50%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|220934164|ref|YP_002513063.1| NADH (or F420H2) dehydrogenase, subunit C [Thioalkalivibrio sp.
HL-EbGR7]
gi|254767814|sp|B8GNY7|NUOC_THISH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|219995474|gb|ACL72076.1| NADH (or F420H2) dehydrogenase, subunit C [Thioalkalivibrio sp.
HL-EbGR7]
Length = 239
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 106/214 (49%), Gaps = 43/214 (20%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++E L + F + ++ GEL+L V + LRDD F +IDL
Sbjct: 1 MSERLEKLAARLTERFKAAGGKVDSAYGELTLTVPAAAMTDTAKALRDD--LGFEMLIDL 58
Query: 61 CGVDFLSRS---------------------------------------NRFDVVYHFLSP 81
CGVD+ RF VVYH LS
Sbjct: 59 CGVDYQEYGVAEWSTEESSNQGFSRGVEKATFGRFIFDEVAERKAHEGPRFAVVYHLLSI 118
Query: 82 KYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
N+RLR+K+ + V ++ ++ ADW+ERE +D++GI FEGHPDLRRILTDYGF
Sbjct: 119 SANQRLRMKVFCEDEEFPVVSTVTDVWTSADWYEREAFDLFGIMFEGHPDLRRILTDYGF 178
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
GHP RKDFP+ G VE+ YD + +VVY+PV +
Sbjct: 179 VGHPFRKDFPLVGHVEMRYDPEQARVVYQPVSIE 212
>gi|110225715|ref|YP_665720.1| NADH dehydrogenase subunit 9 [Mesostigma viride]
gi|17222586|gb|AAL36759.1|AF353999_39 NADH dehydrogenase subunit 9 [Mesostigma viride]
Length = 190
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/177 (46%), Positives = 111/177 (62%), Gaps = 1/177 (0%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSR 68
++IV + GE S+ V ++ FLRD +ID+ GVD+ SR
Sbjct: 11 EHIVAMVPKWIECVEYQKGEWSITVSNETVIDSFFHFLRDTEFAECEMLIDIAGVDYPSR 70
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
RF++VY LS Y +R+RVK+ V E VPS+ IYP A +FEREVWDMYG+FF HP
Sbjct: 71 LKRFEIVYQLLSIHYGQRIRVKVKVDELSPVPSVTNIYPSAGYFEREVWDMYGVFFSHHP 130
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
DLRRILTDYGFEG+PLRKDFP++G+ E+ YD +V+ P+E+ QE R + +PW
Sbjct: 131 DLRRILTDYGFEGYPLRKDFPLSGYFEVRYDLSKTRVIVEPLEMSQEFRYLETRNPW 187
>gi|88608330|ref|YP_506318.1| NADH dehydrogenase I, C subunit [Neorickettsia sennetsu str.
Miyayama]
gi|123491985|sp|Q2GDX8|NUOC_NEOSM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|88600499|gb|ABD45967.1| NADH dehydrogenase I, C subunit [Neorickettsia sennetsu str.
Miyayama]
Length = 186
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 116/185 (62%), Gaps = 4/185 (2%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY 76
+ V +N+ G ++ LV L S L C F + D+ G+D+L R R +VVY
Sbjct: 5 TTEVDALINAPGRCVVNSSLESLVELISHL---SSCGFEQLTDIFGIDYLEREKRIEVVY 61
Query: 77 HFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
L K NRR VK++V + VP+ G++ A+WFEREV+DMYG+ FEGHPDLRRILT
Sbjct: 62 LLLDLKRNRRCCVKVSVDPASEKVPTCCGVFSVANWFEREVYDMYGVVFEGHPDLRRILT 121
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKE 195
DY FEG P+ KDFP+TG+ E+ YD + K+VVY V+L Q++R +D L+PW+GV
Sbjct: 122 DYEFEGFPMLKDFPLTGYKEVRYDLESKEVVYEKVDLSQDYRSFDSLTPWKGVGRPSDPF 181
Query: 196 DSKDD 200
D + +
Sbjct: 182 DGRKE 186
>gi|294788081|ref|ZP_06753325.1| NADH dehydrogenase (ubiquinone), C subunit [Simonsiella muelleri
ATCC 29453]
gi|294484374|gb|EFG32057.1| NADH dehydrogenase (ubiquinone), C subunit [Simonsiella muelleri
ATCC 29453]
Length = 195
Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 18/198 (9%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
DL + + E++++ + + + LRD F +I+DLCGVD+
Sbjct: 5 DLQAACTEILGKKASKILLAFDEVTIECQPEHYLDIMTTLRDHEDLHFESIVDLCGVDYS 64
Query: 67 SRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWD 118
+ N V +S K+N+R+RV++ + PS+V IY ADW+ERE +D
Sbjct: 65 TYKNEKWQGKRFAAVSQLVSVKHNQRVRVRVWAQDDDLPLVPSVVNIYNSADWYEREAFD 124
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
MYGI F HPDLRRILTDYGF GHP RKDFPV+G+VE+ YD+ K+V+Y+PV +
Sbjct: 125 MYGIIFNEHPDLRRILTDYGFVGHPFRKDFPVSGYVEMRYDETEKRVIYQPVTIE----- 179
Query: 179 YDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 180 -----PREITPRVVREEN 192
>gi|89280732|ref|YP_514683.1| NADH dehydrogenase subunit 9 [Oryza sativa Indica Group]
gi|289065051|ref|YP_003433862.1| NADH dehydrogenase subunit 9 [Oryza rufipogon]
gi|1101745|dbj|BAA08794.1| NADH dehydrogenase subunit 9 [Oryza sativa Japonica Group]
gi|56784284|dbj|BAD81966.1| Mitochondrion NADH dehydrogenase subunit 9 [Oryza sativa Japonica
Group]
gi|74100099|gb|AAZ99263.1| NADH dehydrogenase subunit 9 [Oryza sativa Indica Group]
gi|74100154|gb|AAZ99317.1| NADH dehydrogenase subunit 9 [Oryza sativa Japonica Group]
gi|74100208|gb|AAZ99370.1| NADH dehydrogenase subunit 9 [Oryza sativa Japonica Group]
gi|164422243|gb|ABY55216.1| NADH dehydrogenase subunit 9 [Bambusa oldhamii]
gi|285026133|dbj|BAI67966.1| NADH dehydrogenase subunit 9 [Oryza rufipogon]
gi|285026183|dbj|BAI68015.1| NADH dehydrogenase subunit 9 [Oryza sativa Indica Group]
gi|285026196|dbj|BAI68028.1| NADH dehydrogenase subunit 9 [Oryza sativa Indica Group]
Length = 190
Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats.
Identities = 76/148 (51%), Positives = 99/148 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 39 FPLLCFLKWHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM G+ HPDLRRI TDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSPFPSAGRWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|288942132|ref|YP_003444372.1| NADH (or F420H2) dehydrogenase subunit C [Allochromatium vinosum
DSM 180]
gi|288897504|gb|ADC63340.1| NADH (or F420H2) dehydrogenase, subunit C [Allochromatium vinosum
DSM 180]
Length = 235
Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 106/202 (52%), Gaps = 30/202 (14%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ L I F+ S +++ EL+L V L+ + LRD F +IDLC
Sbjct: 9 TARVDALVAAIRAHFAESDFELIDAFDELTLVVPAERLLDVARTLRDHDDFRFEQLIDLC 68
Query: 62 GVDFLSRSNRFD-----------------------------VVYHFLSPKYNRRLRVKIA 92
GVD+ + VV H LS +N RLR+++
Sbjct: 69 GVDYAAYGCSEWETDEASTTGFGRGVDRDLRIEADDPKRFGVVVHLLSLAHNHRLRLRVH 128
Query: 93 VAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
V + ++ ++ A+WFERE +D+YGI F GHPDLRRILTDYGF GHP RKDFP++
Sbjct: 129 VGAAAPIVDSLIPVWDSANWFEREAFDLYGILFRGHPDLRRILTDYGFVGHPFRKDFPLS 188
Query: 152 GFVELHYDDKVKKVVYRPVELM 173
G VE+ YD ++K+VVY PV +
Sbjct: 189 GQVEMRYDPELKRVVYEPVSIE 210
>gi|94502590|ref|YP_588298.1| NADH dehydrogenase subunit 9 [Zea mays subsp. mays]
gi|114151581|ref|YP_740371.1| NADH dehydrogenase subunit 9 [Zea perennis]
gi|114151613|ref|YP_740429.1| NADH dehydrogenase subunit 9 [Zea luxurians]
gi|114151647|ref|YP_740398.1| NADH dehydrogenase subunit 9 [Zea mays subsp. parviglumis]
gi|115278549|ref|YP_762327.1| NADH dehydrogenase subunit 9 [Sorghum bicolor]
gi|115278619|ref|YP_762490.1| NADH dehydrogenase subunit 9 [Tripsacum dactyloides]
gi|40795029|gb|AAR91073.1| NADH dehydrogenase subunit 9 [Zea mays]
gi|93116054|gb|ABE98687.1| NADH dehydrogenase subunit 9 [Zea mays subsp. mays]
gi|93116098|gb|ABE98730.1| NADH dehydrogenase subunit 9 [Zea mays subsp. mays]
gi|93116146|gb|ABE98777.1| NADH dehydrogenase subunit 9 [Zea mays subsp. mays]
gi|102567915|gb|ABF70832.1| NADH dehydrogenase subunit 9 [Zea perennis]
gi|102567980|gb|ABF70864.1| NADH dehydrogenase subunit 9 [Zea mays subsp. parviglumis]
gi|102579647|gb|ABF70927.1| NADH dehydrogenase subunit 9 [Zea mays subsp. mays]
gi|110287609|gb|ABG65655.1| NADH dehydrogenase subunit 9 [Zea luxurians]
gi|114309670|gb|ABI60887.1| NADH dehydrogenase subunit 9 [Sorghum bicolor]
gi|114432110|gb|ABI74659.1| NADH dehydrogenase subunit 9 [Tripsacum dactyloides]
Length = 190
Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats.
Identities = 76/148 (51%), Positives = 99/148 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 39 FPLLCFLKWHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM G+ HPDLRRI TDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSPFPSAGRWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|160688744|gb|ABX45160.1| NADH dehydrogenase subunit 9 [Polysphondylium pallidum]
Length = 207
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 108/182 (59%), Gaps = 4/182 (2%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+G + ++ + + G L + +D DL ++ S L+ + ++D+ +D L+
Sbjct: 12 IGTILAKLVPNLIKKIIYTPGNLDVIIDSKDLNNVLSILKLNTIMQCKMLLDIVCIDCLN 71
Query: 68 RSNR----FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
F ++Y S N R+ V + + +++ S ++ A W ERE+WDMYGI+
Sbjct: 72 IEENKLGRFKIIYVLNSIFNNSRIHVIVYLKNNETIDSCSSLFSSAVWLEREIWDMYGIY 131
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGF +PL+KDFP+TG++E++YD KK++Y+P+ELMQE R Y++
Sbjct: 132 FANHPDLRRILTDYGFSWYPLKKDFPLTGYIEVYYDINDKKIIYKPIELMQEFRMYEYGI 191
Query: 184 PW 185
W
Sbjct: 192 SW 193
>gi|291498617|gb|ADE08091.1| nad9 [Triticum aestivum]
Length = 190
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 76/148 (51%), Positives = 100/148 (67%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 39 FPLLCFLKWHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM G+ HPDLRRI TDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSLFPSAGRWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +DF SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|11466473|ref|NP_038176.1| NADH dehydrogenase subunit 9 [Chrysodidymus synuroideus]
gi|7110470|gb|AAF36942.1|AF222718_16 NADH dehydrogenase subunit 9 [Chrysodidymus synuroideus]
Length = 177
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 107/181 (59%), Gaps = 6/181 (3%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ L I F + E + + +L L+ + F + + GVD
Sbjct: 3 KTLKKIIPFIFFQKI------NNEDLIILLPKNLRFSLLCLKKHINYQFSLLSYIAGVDL 56
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
L RF VVY LS +N RLR+K+ + E ++PS+ IY ++W+EREVWD++GI+FE
Sbjct: 57 LGCKYRFCVVYDLLSLSFNIRLRIKLFITEVNTIPSVTDIYVNSNWWEREVWDLFGIYFE 116
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
HPDLRRILTDYGFEG+P+RKDFP+ G+ EL YD+ K++V VEL Q R ++F PW
Sbjct: 117 NHPDLRRILTDYGFEGYPMRKDFPLYGYTELRYDESKKQIVVESVELSQNFRLFEFEMPW 176
Query: 186 E 186
+
Sbjct: 177 Q 177
>gi|505273|emb|CAA56168.1| NADH dehydrogenase [Solanum tuberosum]
Length = 190
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 77/155 (49%), Positives = 104/155 (67%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L F++ + ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFMKLHTYTRVQVSIDICGVDYPSRKQRFEVVYNLLSIRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|114321117|ref|YP_742800.1| NADH (or F420H2) dehydrogenase, subunit C [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311304|sp|Q0A777|NUOC_ALHEH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|114227511|gb|ABI57310.1| NADH dehydrogenase subunit C [Alkalilimnicola ehrlichii MLHE-1]
Length = 247
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/219 (33%), Positives = 107/219 (48%), Gaps = 46/219 (21%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNS--VGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M +K+E L + +R V GEL+++V DL + LRD F ++
Sbjct: 1 MAKKLEQLQTAVQERLGERLRDCVLDADRGELAIEVAPADLHQAMTTLRDAEGLRFDMLM 60
Query: 59 DLCGVDFLSRSNRFDVV------------------------------------------Y 76
DL GVD+ + Y
Sbjct: 61 DLAGVDYAAWGEDEWFTDTAEGTGFSRGVQGNNFARLGITGIYGVQEITENTGRRFAAVY 120
Query: 77 HFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
LS + N+RLRV+ + + S+V ++ GA+WFERE +D+YGI F+GHPDLRRIL
Sbjct: 121 QLLSVELNQRLRVRCFCEDDRFPVLDSVVDVWSGANWFEREAFDLYGIIFDGHPDLRRIL 180
Query: 135 TDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
TDYGF GHP RKDFP+ G VE+ YD++ ++V+Y+PV +
Sbjct: 181 TDYGFVGHPFRKDFPLIGNVEVRYDEQKRRVIYQPVSIE 219
>gi|58582857|ref|YP_201873.1| NADH dehydrogenase subunit C [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84624722|ref|YP_452094.1| NADH dehydrogenase subunit C [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577694|ref|YP_001914623.1| NADH dehydrogenase subunit C [Xanthomonas oryzae pv. oryzae PXO99A]
gi|81311785|sp|Q5GXT3|NUOC_XANOR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|123521395|sp|Q2P0V7|NUOC_XANOM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534329|sp|B2SVL7|NUOC_XANOP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|58427451|gb|AAW76488.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84368662|dbj|BAE69820.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|188522146|gb|ACD60091.1| NADH-quinone oxidoreductase chain c [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 250
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSGEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSAGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPLVASVTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDEERKRVVYEPVT 218
>gi|121604332|ref|YP_981661.1| NADH (or F420H2) dehydrogenase subunit C [Polaromonas
naphthalenivorans CJ2]
gi|218534341|sp|A1VM62|NUOC_POLNA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|120593301|gb|ABM36740.1| NADH dehydrogenase subunit C [Polaromonas naphthalenivorans CJ2]
Length = 204
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 18/201 (8%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ LG+ I G + ++GE+++ V D ++ + LRD P C F ++DLCG+
Sbjct: 9 SVSQLGETIALVLGGKAKSVKIALGEITVTVAAADYLAAATLLRDAPGCKFEQLLDLCGL 68
Query: 64 DFLSRSN------RFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFERE 115
D+ N R+ V H LS N+R+R+K+ + V S+ GI+ A+WFERE
Sbjct: 69 DYSEYKNGQYDGLRYCVSSHLLSVSLNQRVRLKVFCPDDDFPVVDSVNGIWNSANWFERE 128
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
+D+YGI FEGH DLRRILTDYGF GHP RKDFP TG VE+ YD + K+V+Y+PV +
Sbjct: 129 AFDLYGIVFEGHNDLRRILTDYGFIGHPFRKDFPTTGHVEMRYDAEQKRVIYQPVTIE-- 186
Query: 176 HRDYDFLSPWEGVNSLFAKED 196
P E + + +++
Sbjct: 187 --------PREMIPRVIREDN 199
>gi|319779200|ref|YP_004130113.1| NADH-ubiquinone oxidoreductase chain C [Taylorella equigenitalis
MCE9]
gi|317109224|gb|ADU91970.1| NADH-ubiquinone oxidoreductase chain C [Taylorella equigenitalis
MCE9]
Length = 204
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 113/207 (54%), Gaps = 24/207 (11%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+R IEDL ++ S V V E+++DV D V C LRD F +DLC
Sbjct: 1 MRDIEDLKASLIQSIGDKF-PIVEHVHEITIDVPSSDWVQTCITLRDHVDLRFDIAVDLC 59
Query: 62 GVDFLSRS-----------NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPG 108
GVD+ NR+ VV H LS +N R+RV+ + V S+ ++
Sbjct: 60 GVDYSKYGFPGNSTISKFPNRYAVVLHLLSTVHNSRVRVRTFALDDELPMVRSLTDVWAN 119
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
WFERE +DM+GI FEGHPDLRRILTDYGF GHPLRKDFPV+G+VE+ +D++ +VVY+
Sbjct: 120 IGWFEREAFDMFGIVFEGHPDLRRILTDYGFIGHPLRKDFPVSGYVEMIFDEEQNRVVYQ 179
Query: 169 PVELMQEHRDYDFLSPWEGVNSLFAKE 195
PV + P E + +E
Sbjct: 180 PVSIE----------PREITPRIIREE 196
>gi|160872520|ref|ZP_02062652.1| NADH-quinone oxidoreductase, c subunit [Rickettsiella grylli]
gi|159121319|gb|EDP46657.1| NADH-quinone oxidoreductase, c subunit [Rickettsiella grylli]
Length = 230
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 33/204 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + L + F+ ++ + E++L++ L + LRD+ F ++D+
Sbjct: 1 MSDVVSQL-QKLNQRFNSVIQEIAVARNEINLEISAEKLKEVGLALRDEADFKFELLVDV 59
Query: 61 CGVDFLSR-------------------------------SNRFDVVYHFLSPKYNRRLRV 89
C VD+ RF VVYH LS +N+RLR+
Sbjct: 60 CVVDYAEYGVSEWTTEQSTLTGFERGVDKTGDLHPINWNKPRFAVVYHLLSLTHNQRLRL 119
Query: 90 KIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+I VPS++ ++P A+W+ERE +D++G+FF+GHPDLRR+LTDYGF GHP RKDF
Sbjct: 120 RIFAQGEPPQVPSVIKLWPAANWYEREAFDLFGVFFDGHPDLRRLLTDYGFVGHPFRKDF 179
Query: 149 PVTGFVELHYDDKVKKVVYRPVEL 172
P+TG VE+ YD +VVY+PV +
Sbjct: 180 PLTGHVEVRYDATKGRVVYQPVTI 203
>gi|166712612|ref|ZP_02243819.1| NADH dehydrogenase subunit C [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 250
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVASADWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CG+D+L RF
Sbjct: 59 CGIDYLGYGSGEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSAGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASVTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDEERKRVVYEPVT 218
>gi|21243430|ref|NP_643012.1| NADH dehydrogenase subunit C [Xanthomonas axonopodis pv. citri str.
306]
gi|81860559|sp|Q8PJ42|NUOC_XANAC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|21108983|gb|AAM37548.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 250
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSAGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASVTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YDD+ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDDERKRVVYEPVT 218
>gi|324309726|gb|ADY18507.1| NADH dehydrogenase subunit 9-ribosomal protein S14 fusion protein
[Phaeodactylum tricornutum]
Length = 284
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I + S E S + L + + +++ +C F + + GVD+ S+R
Sbjct: 8 IAKILP--ILRFELSRTEGSFLIQTNLLPEILTMVKNHFNCQFKVLTCISGVDYPESSHR 65
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F +VY LS K N RLR+K+ + E + S+ I GA W+E E+WDM+G+FF +L
Sbjct: 66 FKIVYELLSIKRNSRLRLKVILDELSPINSVEKIISGASWWECEIWDMFGVFFLNQDNLT 125
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
R+LTDYGF+G+PLRKDFP++GF E Y +VVY +E+ QE+R ++FLSPWE
Sbjct: 126 RLLTDYGFQGYPLRKDFPLSGFTESRYSSIKSRVVYENLEMSQEYRTFEFLSPWE 180
>gi|1507657|dbj|BAA11532.1| subunit 9 of NADH dehydrogenase [Arabidopsis thaliana]
Length = 190
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/155 (49%), Positives = 103/155 (66%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ +
Sbjct: 32 DTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A +EREVWDM+G+ F HPDL RI TDYGFEGHPLRKD P++G
Sbjct: 92 ADEVTRISPVVSLFPSAGRWEREVWDMFGVSFINHPDLPRISTDYGFEGHPLRKDLPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+V++ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 152 YVQVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>gi|282767720|gb|ADA85897.1| NADH hydrogenase subunit 9 [Allium cepa]
Length = 186
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 73/147 (49%), Positives = 100/147 (68%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
+ FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 39 FPVLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM+G+ HPDLRRI TD+GFEGHPLRKDFP++G+VE+ YD
Sbjct: 99 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRISTDHGFEGHPLRKDFPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWE 186
D K+VV P+E+ QE R +D SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDSASPWE 185
>gi|294624676|ref|ZP_06703346.1| NADH dehydrogenase subunit C [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601032|gb|EFF45099.1| NADH dehydrogenase subunit C [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 250
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 105/220 (47%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSRSNRFD----------------------------------------------- 73
CGVD+L +
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSAGAQPQQLPKRRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASVTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YDD+ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDDERKRVVYEPVT 218
>gi|78048407|ref|YP_364582.1| NADH dehydrogenase subunit C [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123584673|sp|Q3BRN1|NUOC_XANC5 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|78036837|emb|CAJ24530.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 250
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSAGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASLTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDEERKRVVYEPVT 218
>gi|325924677|ref|ZP_08186115.1| NADH dehydrogenase subunit C [Xanthomonas perforans 91-118]
gi|325544883|gb|EGD16228.1| NADH dehydrogenase subunit C [Xanthomonas perforans 91-118]
Length = 250
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSSGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASLTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDEERKRVVYEPVT 218
>gi|21231958|ref|NP_637875.1| NADH dehydrogenase subunit C [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767915|ref|YP_242677.1| NADH dehydrogenase subunit C [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991031|ref|YP_001903041.1| NADH dehydrogenase subunit C [Xanthomonas campestris pv. campestris
str. B100]
gi|81306108|sp|Q4UWB6|NUOC_XANC8 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|81860265|sp|Q8P7T4|NUOC_XANCP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534327|sp|B0RRA0|NUOC_XANCB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|21113689|gb|AAM41799.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66573247|gb|AAY48657.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xanthomonas campestris
pv. campestris str. 8004]
gi|167732791|emb|CAP50985.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xanthomonas campestris
pv. campestris]
Length = 250
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ V GE++L+V + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQISVVQPRGEVTLEVAAAQWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSRS-----------------------------------------------NRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKALGRFAWGEFPSQESSNGAQPQQLPTQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASLTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YDD+ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDDERKRVVYEPVT 218
>gi|325915541|ref|ZP_08177852.1| NADH dehydrogenase subunit C [Xanthomonas vesicatoria ATCC 35937]
gi|325538257|gb|EGD09942.1| NADH dehydrogenase subunit C [Xanthomonas vesicatoria ATCC 35937]
Length = 250
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAVGRFGWGEFPSQESSTGAHPQHMPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASVTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDEERKRVVYEPVT 218
>gi|294666775|ref|ZP_06732009.1| NADH dehydrogenase subunit C [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603436|gb|EFF46853.1| NADH dehydrogenase subunit C [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 250
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V + + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAAEWHATCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSAGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASVTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YDD+ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDDERKRVVYEPVT 218
>gi|255019909|ref|ZP_05291984.1| NADH-ubiquinone oxidoreductase chain C [Acidithiobacillus caldus
ATCC 51756]
gi|254970689|gb|EET28176.1| NADH-ubiquinone oxidoreductase chain C [Acidithiobacillus caldus
ATCC 51756]
Length = 198
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 79/176 (44%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ D ++ VR EL+L+++ L+ FLRDDP C F +IDLCGVD
Sbjct: 1 MNDTSQILLAELGQLVRHCRVDRAELTLELERDGLLESLRFLRDDPRCDFQQLIDLCGVD 60
Query: 65 FLSRS------NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVW 117
+ RF VVYH LS +++RLRV++ + E + V I+P A+WFERE +
Sbjct: 61 YAEYGDGSWSGPRFAVVYHLLSLNHHQRLRVRVYLDEELPIVPSAVEIWPAANWFEREAF 120
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
D++G FEGHPDLRRILTDYGF GHP RKDFP+ G VE+ YD ++VVY P
Sbjct: 121 DLFGFLFEGHPDLRRILTDYGFVGHPFRKDFPLVGTVEMRYDADQRRVVYEPTRTE 176
>gi|325921409|ref|ZP_08183266.1| NADH dehydrogenase subunit C [Xanthomonas gardneri ATCC 19865]
gi|325548167|gb|EGD19164.1| NADH dehydrogenase subunit C [Xanthomonas gardneri ATCC 19865]
Length = 250
Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 105/220 (47%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D + C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHATCLVLRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD L RF
Sbjct: 59 CGVDHLGYGSDEWDTADVSSQGFSRGVEGKAVGRFAWGEFPSQESSDGAHPQHMPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASLTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDEEKKRVVYEPVT 218
>gi|294669094|ref|ZP_06734180.1| NADH dehydrogenase, C subunit [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309086|gb|EFE50329.1| NADH dehydrogenase, C subunit [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 196
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+DL G + ++ E++++ + + LRD F ++DLCGVD+
Sbjct: 4 KDLYSAAQRILDGKADKVLLALDEVTVECRPEYYLDIMQTLRDHEEMHFELLVDLCGVDY 63
Query: 66 LSRSNRFD------VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVW 117
+ N VV LS K N+R+RV++ S++ IY ADW+ERE +
Sbjct: 64 STYKNEAWPGQRFAVVSQLLSVKNNQRIRVRVWAENDDFPLVQSVINIYNSADWYEREAF 123
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DMYGI FE HPDLRRILTDYGF GHP RKDFP++G+VE+ YD+ K+V+Y+PV +
Sbjct: 124 DMYGIVFENHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDETEKRVIYQPVTIE---- 179
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 180 ------PREITPRVVREEN 192
>gi|289667378|ref|ZP_06488453.1| NADH dehydrogenase subunit C [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 250
Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 105/220 (47%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ GE++L+V D C LRD F + DL
Sbjct: 1 MAEQASSFTDRLAARFAGAQIAVTLPRGEVTLEVAAADWHVTCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAIGRFAWGEFPSQESSSGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDKQVPVVASLTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YDD+ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDDERKRVVYEPVT 218
>gi|225024123|ref|ZP_03713315.1| hypothetical protein EIKCOROL_00991 [Eikenella corrodens ATCC
23834]
gi|224943148|gb|EEG24357.1| hypothetical protein EIKCOROL_00991 [Eikenella corrodens ATCC
23834]
Length = 196
Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 108/199 (54%), Gaps = 18/199 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+DL G + ++ E++++ + + LRD F ++DLCGVD+
Sbjct: 4 KDLYSAAQRILEGKADKVLLALDEVTVECRPEYYLDIMQTLRDHEEMHFELLVDLCGVDY 63
Query: 66 ------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVW 117
RF VV LS K N+R+RV++ S++ IY ADW+ERE +
Sbjct: 64 STYKDEPWLGKRFAVVSQLLSVKNNQRIRVRVWAENDDFPLVQSVINIYNSADWYEREAF 123
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DMYGI FE HPDLRRILTDYGF GHP RKDFP++G+VE+ YD+ K+V+Y+PV +
Sbjct: 124 DMYGIVFENHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDETEKRVIYQPVTIE---- 179
Query: 178 DYDFLSPWEGVNSLFAKED 196
P E + +E+
Sbjct: 180 ------PREITPRVVREEN 192
>gi|153207289|ref|ZP_01946053.1| NADH dehydrogenase (ubiquinone), C subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|165918788|ref|ZP_02218874.1| NADH dehydrogenase (ubiquinone), C subunit [Coxiella burnetii RSA
334]
gi|212218214|ref|YP_002305001.1| NADH-quinone oxidoreductase chain C [Coxiella burnetii CbuK_Q154]
gi|120576777|gb|EAX33401.1| NADH dehydrogenase (ubiquinone), C subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|165917512|gb|EDR36116.1| NADH dehydrogenase (ubiquinone), C subunit [Coxiella burnetii RSA
334]
gi|212012476|gb|ACJ19856.1| NADH-quinone oxidoreductase chain C [Coxiella burnetii CbuK_Q154]
Length = 227
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 110/205 (53%), Gaps = 33/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K + L D I + F+ + V V +++++ L+ +C+ LRDDP F ++D+
Sbjct: 1 MSEK-QTLIDAINDRFNSQIEAVVAGVDMVTIELLPTHLLEVCTALRDDPPFNFELLLDV 59
Query: 61 CGVDF-------------------------------LSRSNRFDVVYHFLSPKYNRRLRV 89
CGVD+ RF VVYH LS ++N R+R+
Sbjct: 60 CGVDYLEYGMSPWRTEETPNTGFSRGFEEVIQEQIIPWNKPRFAVVYHLLSLRHNHRIRL 119
Query: 90 KIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K V + ++ I+ ADW+ERE +D+YGI FEGHPDLRR+LTDYGF GHP RKDF
Sbjct: 120 KTYVEGDPPLVPSVIKIWSSADWYEREAFDLYGIVFEGHPDLRRLLTDYGFVGHPFRKDF 179
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P+ G VEL YD ++ VY PV +
Sbjct: 180 PLIGEVELRYDAAQQRCVYEPVSIQ 204
>gi|270158112|ref|ZP_06186769.1| NADH-quinone oxidoreductase C subunit [Legionella longbeachae
D-4968]
gi|289163623|ref|YP_003453761.1| NADH dehydrogenase I chain C [Legionella longbeachae NSW150]
gi|269990137|gb|EEZ96391.1| NADH-quinone oxidoreductase C subunit [Legionella longbeachae
D-4968]
gi|288856796|emb|CBJ10607.1| NADH dehydrogenase I chain C [Legionella longbeachae NSW150]
Length = 227
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 32/204 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + L + + + + V + E++++VD +L ++ LRD CF +IDL
Sbjct: 1 MTKN-DYLVEQLKSELASYVDGVSVAHNEVTIEVDVSNLKAVMHELRDLESFCFDQLIDL 59
Query: 61 CGVDFLSRSNR------------------------------FDVVYHFLSPKYNRRLRVK 90
C VD+L F VVYH LS K N R+RVK
Sbjct: 60 CAVDYLLYGQYDWETDAATEKGFSRGVERQETKACTLDKPRFAVVYHLLSTKKNHRIRVK 119
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V E + + ++ GA+WFERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFP
Sbjct: 120 VFVDESHLIVPSVHDLWKGANWFEREAYDLYGVLFEGHPDLRRILTDYGFIGHPFRKDFP 179
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
++G VE+ YD K +KV+Y PV++
Sbjct: 180 LSGHVEMRYDAKSEKVIYAPVDIE 203
>gi|165933065|ref|YP_001649854.1| NADH dehydrogenase subunit C [Rickettsia rickettsii str. Iowa]
gi|165908152|gb|ABY72448.1| NADH-quinone oxidoreductase chain C [Rickettsia rickettsii str.
Iowa]
Length = 206
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 35/196 (17%)
Query: 41 SLCSFLRDDPHCCFVNIIDLCGVDFLSRS------------------------------- 69
L++ F + DL G DF +
Sbjct: 2 PFLKALKESEELRFTLLTDLFGADFPQNNVVNSVGLGHKEQGAKPITNRRTTSDNVGESK 61
Query: 70 ----NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
RF+VVY+ LS K N+RL +K+ ++E +++PS + I+ A W+EREV+DMYG+ FE
Sbjct: 62 SIDYKRFEVVYNLLSLKLNKRLIIKVYISEQETIPSAMSIFSAACWYEREVYDMYGVNFE 121
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
G+ D RRILTDY FEGHPLRKDFP+TG+ ++ YD+K+KKV Y PV+L E+R++DF S W
Sbjct: 122 GNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHW 181
Query: 186 EGVNSLFAKEDSKDDM 201
+ + ++ ++
Sbjct: 182 HSPSYVLPGDEKATNV 197
>gi|308311749|gb|ADO27643.1| nad9 [Rhizanthella gardneri]
Length = 190
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 75/155 (48%), Positives = 99/155 (63%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+ D L FL+ + ID+CGVD SR RF VV++ LS +YN R+RV+ +
Sbjct: 32 ETDTDYPFPLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFSVVHNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V +P A +EREVWDM G+ HPDLRRI TD+GFEGHPLRKDFP++G
Sbjct: 92 ADEVTRISPVVSPFPSAGRWEREVWDMSGVSSINHPDLRRISTDHGFEGHPLRKDFPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +D SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDSASPWEQ 186
>gi|326910754|gb|AEA11195.1| NADH dehydrogenase subunit 9 [Selaginella moellendorffii]
gi|327176863|gb|AEA29870.1| NADH dehydrogenase subunit 9 [Selaginella moellendorffii]
Length = 205
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 68/184 (36%), Positives = 102/184 (55%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ + +L L L + FL+ F ++ L
Sbjct: 1 METTYPFVTFLTAILPHWIHGWDRPRRDLLLHPYPDHLFQVLWFLKYHSIARFSVLMHLA 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVD+ SR+ R +VY LS N R+R++ E + S+ ++P ADW+EREVWDM+G
Sbjct: 61 GVDYPSRAQRVALVYTLLSVSLNTRIRLRTTYDELTPICSVSSLFPTADWWEREVWDMFG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
+ F HPD RRILTDYGF+ HPLRK+FP++G+V + YDD ++V P+E+ QE+R +D
Sbjct: 121 VHFSHHPDCRRILTDYGFDWHPLRKEFPLSGYVHVRYDDSDGRIVTAPIEMNQEYRYFDL 180
Query: 182 LSPW 185
PW
Sbjct: 181 ACPW 184
>gi|254468244|ref|ZP_05081650.1| NADH dehydrogenase i chain c [beta proteobacterium KB13]
gi|207087054|gb|EDZ64337.1| NADH dehydrogenase i chain c [beta proteobacterium KB13]
Length = 195
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + L + ++F +V E +L + +++ L+ F+ +ID+
Sbjct: 1 MSDLNKLISNLKSTFPQAVVNKQ--FDEATLSIYGNEIIKTLKKLKTGSQFKFLQLIDIA 58
Query: 62 GVDF------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK--SVPSIVGIYPGADWFE 113
VD+ L +NR+ VVYH LS K N+RLRV+ V + + + +Y ADW+E
Sbjct: 59 AVDYSQYPQKLFDNNRYAVVYHLLSIKNNQRLRVRAFVEDNNFPVIETATTVYANADWYE 118
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE +D++G+ F HPDLRRILTDYGF GHP RKDFP+ G VE+ YD + K+V+Y+PV +
Sbjct: 119 REAFDLFGVMFLNHPDLRRILTDYGFIGHPFRKDFPMIGNVEMRYDPEQKRVIYQPVTIE 178
>gi|157964435|ref|YP_001499259.1| NADH dehydrogenase subunit C [Rickettsia massiliae MTU5]
gi|157844211|gb|ABV84712.1| NADH dehydrogenase I chain C [Rickettsia massiliae MTU5]
Length = 242
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 36/233 (15%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + S + L+ ++ L+ L++ F + DL G
Sbjct: 2 TLDKLIERLAAKSSILITPITVK-DYLAYKIEPNFLLLFLKALKESEELRFTLLTDLFGA 60
Query: 64 DFLSRS-----------------------------------NRFDVVYHFLSPKYNRRLR 88
DF + RF+VVY+ LS K N+RL
Sbjct: 61 DFPQNNVVNSVGLGYKEQGAKPITNRRATSDNVGESKSIDYKRFEVVYNLLSLKLNKRLI 120
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+K+ ++E +++PS + I+ A W+EREV+DMYG+ FEG+ D RRILTDY FEGHPLRKDF
Sbjct: 121 IKVYISEKETIPSAMNIFSAACWYEREVYDMYGVNFEGNDDKRRILTDYEFEGHPLRKDF 180
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKDDM 201
P+TG+ ++ YD+K+KKV Y PV+L E+R++DF S W + + ++ D+
Sbjct: 181 PLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHWHSPSYVLPGDEKATDV 233
>gi|161829956|ref|YP_001597291.1| NADH dehydrogenase (ubiquinone), C subunit [Coxiella burnetii RSA
331]
gi|218534266|sp|A9N8X1|NUOC_COXBR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|161761823|gb|ABX77465.1| NADH dehydrogenase (ubiquinone), C subunit [Coxiella burnetii RSA
331]
Length = 227
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 110/205 (53%), Gaps = 33/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K + L D I + F+ + V V +++++ L+ +C+ LRDDP F ++D+
Sbjct: 1 MAEK-QTLIDAINDRFNSQIEAVVAGVDMVTIELLPTHLLEVCTTLRDDPPFNFELLLDV 59
Query: 61 CGVDF-------------------------------LSRSNRFDVVYHFLSPKYNRRLRV 89
CGVD+ RF VVYH LS ++N R+R+
Sbjct: 60 CGVDYLEYGMSPWRTEETPNTGFSRGFEEVIQEQIIPWNKPRFAVVYHLLSLRHNHRIRL 119
Query: 90 KIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K V + ++ I+ ADW+ERE +D+YGI FEGHPDLRR+LTDYGF GHP RKDF
Sbjct: 120 KTYVEGDPPLVPSVIKIWSSADWYEREAFDLYGIVFEGHPDLRRLLTDYGFVGHPFRKDF 179
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P+ G VEL YD ++ VY PV +
Sbjct: 180 PLIGEVELRYDAAQQRCVYEPVSIQ 204
>gi|60117113|ref|YP_209576.1| NADH dehydrogenase subunit 9 [Polysphondylium pallidum]
gi|51339677|gb|AAU00591.1| NADH dehydrogenase subunit 9 [Polysphondylium pallidum]
Length = 207
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 110/182 (60%), Gaps = 4/182 (2%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+G ++ G ++ + + +S+ V+ +L ++ S L+ + ++D+ VD L+
Sbjct: 12 IGTMLLKLVPGLIQKIIYNPENISVIVNSKNLNNILSILKLNTIMQCKMLLDIVCVDCLN 71
Query: 68 RSNR----FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIF 123
F ++Y S N R+ V + + +++ S ++ A W ERE+WDMYG++
Sbjct: 72 IEENKLGRFKLIYVLNSVFNNNRIHVIVYLKNNETIESCSSLFSSAVWLEREIWDMYGVY 131
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLS 183
F HPDLRRILTDYGF +PL+KDFP+TG++E++YD KK++Y+P+ELMQE R Y++
Sbjct: 132 FANHPDLRRILTDYGFSWYPLKKDFPLTGYIEVYYDINDKKIIYKPIELMQEFRMYEYGI 191
Query: 184 PW 185
W
Sbjct: 192 SW 193
>gi|29654737|ref|NP_820429.1| NADH dehydrogenase (ubiquinone), C subunit [Coxiella burnetii RSA
493]
gi|154705940|ref|YP_001423958.1| NADH-quinone oxidoreductase chain C [Coxiella burnetii Dugway
5J108-111]
gi|81722521|sp|Q83BQ7|NUOC_COXBU RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534276|sp|A9KBK6|NUOC_COXBN RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|29542005|gb|AAO90943.1| NADH-quinone oxidoreductase chain C [Coxiella burnetii RSA 493]
gi|154355226|gb|ABS76688.1| NADH-quinone oxidoreductase chain C [Coxiella burnetii Dugway
5J108-111]
Length = 227
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 110/205 (53%), Gaps = 33/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K + L D I + F+ + V V +++++ L+ +C+ LRDDP F ++D+
Sbjct: 1 MAEK-QTLIDAINDRFNSQIEAVVAGVDMVTIELLPTHLLEVCTALRDDPPFNFELLLDV 59
Query: 61 CGVDF-------------------------------LSRSNRFDVVYHFLSPKYNRRLRV 89
CGVD+ RF VVYH LS ++N R+R+
Sbjct: 60 CGVDYLEYGMSPWRTEETPNTGFSRGFEEVIQEQIIPWNKPRFAVVYHLLSLRHNHRIRL 119
Query: 90 KIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K V + ++ I+ ADW+ERE +D+YGI FEGHPDLRR+LTDYGF GHP RKDF
Sbjct: 120 KTYVEGDPPLVPSVIKIWSSADWYEREAFDLYGIVFEGHPDLRRLLTDYGFVGHPFRKDF 179
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P+ G VEL YD ++ VY PV +
Sbjct: 180 PLIGEVELRYDAAQQRCVYEPVSIQ 204
>gi|56791598|gb|AAW30337.1| NADH dehydrogenase subunit 9 [Piper betle]
Length = 180
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 76/153 (49%), Positives = 101/153 (66%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D + L L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ +
Sbjct: 28 DTNTDYLFPLLCFLKFHTYTRVQVSIDICGVDHPSRKLRFEVVHNLLSTRYNSRIRVQTS 87
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V ++P A W+EREVWDM G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 88 ADEVTRISPVVSLFPSAGWWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 147
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
+VE+ YDD K+VV P+E+ QE R +D SPW
Sbjct: 148 YVEVRYDDPEKRVVSEPIEMTQEFRYFDSASPW 180
>gi|225465147|ref|XP_002277597.1| PREDICTED: similar to nad9 [Vitis vinifera]
Length = 229
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 98/148 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 78 FQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRI 137
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 138 SPVVSPFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYD 197
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +D SPWE
Sbjct: 198 DPEKRVVSEPIEMTQEFRYFDSASPWEQ 225
>gi|289665175|ref|ZP_06486756.1| NADH dehydrogenase subunit C [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 250
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ D + F+G+ GE++L+V D C LRD F + DL
Sbjct: 1 MAKQASSFTDRLAARFAGAQIAVALPRGEVTLEVAAADWHVTCLALRD--ELGFEQLSDL 58
Query: 61 CGVDFLSR-----------------------------------------------SNRFD 73
CGVD+L RF
Sbjct: 59 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAIGRFAWGEFPSQESSSGAQPQQLPKQRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV +S ++N+RLRV+ + + S+ I+PG +WFERE +D++GI F+GHPDLR
Sbjct: 119 VVAQLISYQHNQRLRVRCYAPDEQVPVVASLTDIWPGVNWFEREAFDLFGIVFDGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+ G VE+ YDD+ K+VVY PV
Sbjct: 179 RILTDYGFVGHPFRKDFPLIGNVEVRYDDERKRVVYEPVT 218
>gi|212212184|ref|YP_002303120.1| NADH-quinone oxidoreductase chain C [Coxiella burnetii CbuG_Q212]
gi|212010594|gb|ACJ17975.1| NADH-quinone oxidoreductase chain C [Coxiella burnetii CbuG_Q212]
Length = 227
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/205 (38%), Positives = 110/205 (53%), Gaps = 33/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K + L D I + F+ + V V +++++ L+ +C+ LRDDP F ++D+
Sbjct: 1 MAEK-QTLIDAINDRFNSQIEAVVAGVDMVTIELLPTHLLEVCTALRDDPPFNFELLLDV 59
Query: 61 CGVDF-------------------------------LSRSNRFDVVYHFLSPKYNRRLRV 89
CGVD+ RF VVYH LS +YN R+R+
Sbjct: 60 CGVDYLEYGMSPWRTEETPNTGFSRGFEEVIQEQIIPWNKPRFAVVYHLLSLRYNHRIRL 119
Query: 90 KIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K V + ++ I+ ADW+ERE +D+YGI FEGHPDLRR+LTDYGF GHP RKDF
Sbjct: 120 KTYVEGDPPLVPSVIKIWSSADWYEREAFDLYGIVFEGHPDLRRLLTDYGFVGHPFRKDF 179
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P+ G VEL YD ++ VY PV +
Sbjct: 180 PLIGEVELRYDAAQQRCVYEPVSIQ 204
>gi|224365639|ref|YP_002608366.1| NADH dehydrogenase subunit 9 [Vitis vinifera]
gi|209954163|emb|CAQ77607.1| NADH dehydrogenase subunit 9 [Vitis vinifera]
gi|239764763|gb|ACS15232.1| NADH dehydrogenase subunit 9 [Vitis vinifera]
Length = 190
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 98/148 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 39 FQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 99 SPVVSPFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +D SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDSASPWEQ 186
>gi|92084858|emb|CAI83762.1| NADH dehydrogenase subunit 9 [Helianthus annuus]
Length = 190
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 98/148 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 39 FQLLCFLQLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRI 98
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 99 SPVVSPFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYD 158
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +D SPWE
Sbjct: 159 DPEKRVVSEPIEMTQEFRYFDSASPWEQ 186
>gi|15836910|ref|NP_297598.1| NADH dehydrogenase subunit C [Xylella fastidiosa 9a5c]
gi|81788889|sp|Q9PGJ3|NUOC_XYLFA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|9105130|gb|AAF83118.1|AE003884_3 NADH-ubiquinone oxidoreductase, NQO5 subunit [Xylella fastidiosa
9a5c]
Length = 250
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + + F GE++LDV + ++C LRD F + DL
Sbjct: 1 MAEQTLSFVDCLTSRFPTVRVSVAQPRGEITLDVPAVEWCAVCRALRD--EFDFEQLSDL 58
Query: 61 CGVDFLSRSNRFD----------------------------------------------- 73
CGVD+L N
Sbjct: 59 CGVDYLGYGNTEWDTTDVSAQGFSRGVAGKAVGRFAWGEFPSAGSNDGTQPWDVPQERFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V+ H +S ++NRRLRV+ + V S+ ++PG +WFERE +D++GI FEGHPDLR
Sbjct: 119 VLAHLISYRHNRRLRVRCFASNDALPIVASLTDVWPGVNWFEREAFDLFGIVFEGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+TG VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFIGHPFRKDFPLTGNVEVRYDEEKKRVVYVPVT 218
>gi|166895614|ref|YP_001661408.1| NADH dehydrogenase subunit 9 [Cycas taitungensis]
gi|166706946|dbj|BAF98410.1| NADH dehydrogenase subunit 9 [Cycas taitungensis]
Length = 197
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 114/199 (57%), Gaps = 3/199 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ + Y+ ++ V S E + L F + + ID
Sbjct: 1 MDNQL--IPKYLRDTSPSKWVHKMERSEHENRSYTNTDYPFQLLWFPKSHTYTRSQVSID 58
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ GVD+ SR RF+VV++ S +YN R+RV+ +V E + +V +P A +EREVWDM
Sbjct: 59 IRGVDYPSRKRRFEVVHNSPSTRYNPRIRVRTSVDEITRISPVVSPFPSAGRWEREVWDM 118
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
G++ HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD K+ V P+ + QE R +
Sbjct: 119 SGVYSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRAVSEPIGMTQEFRYF 178
Query: 180 DFLSPWEGVNSLFAKEDSK 198
DF SPWE + ++ +
Sbjct: 179 DFASPWEQMARSDGSDNEE 197
>gi|254491841|ref|ZP_05105020.1| putative NADH dehydrogenase, subunit C subfamily [Methylophaga
thiooxidans DMS010]
gi|224463319|gb|EEF79589.1| putative NADH dehydrogenase, subunit C subfamily [Methylophaga
thiooxydans DMS010]
Length = 219
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 36/204 (17%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M++ ++ + F+ + + E+++ V +V++C LRD F ++DL
Sbjct: 1 MMQALK---AKLEQDFADELLDCDSDRDEITMHVAAEQIVAVCQRLRD--QYDFEQLLDL 55
Query: 61 CGVDFLSRSNRFD------------------------------VVYHFLSPKYNRRLRVK 90
CGVD+ VVYH LS K+N+RLR+K
Sbjct: 56 CGVDYSEYGGSAWETKQSSEFGFSRAVDGMGHAEPVQDGLRFAVVYHLLSIKHNQRLRLK 115
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ + V + ++ A+WFERE +D++GI F GH DLRRILTDYGF GHP RKDFP
Sbjct: 116 VRLEADSPVVDSVTSVWNSAEWFEREAFDLFGILFNGHNDLRRILTDYGFVGHPFRKDFP 175
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
+ G VE+ YD K+VVY PV +
Sbjct: 176 LIGNVEMRYDPDKKRVVYEPVSIE 199
>gi|56791588|gb|AAW30332.1| NADH dehydrogenase subunit 9 [Eichhornia crassipes]
Length = 179
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 74/152 (48%), Positives = 98/152 (64%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+ L L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ +
Sbjct: 28 YTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSIRYNSRIRVQTS 87
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V +P A +EREVWDM G+ HPDLRRI TDYGFEGHPLRKDFP++G
Sbjct: 88 ADEVTRISPVVSPFPSAGRWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDFPLSG 147
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
+VE+ YDD K+VV P+E+ QE R +D SP
Sbjct: 148 YVEVRYDDPEKRVVSEPIEMTQEFRYFDSASP 179
>gi|308311747|gb|ADO27642.1| nad9 [Rhizanthella gardneri]
Length = 190
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/155 (47%), Positives = 98/155 (63%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+ D L FL+ + ID+CGVD SR RF VV++ LS +YN R+RV+ +
Sbjct: 32 ETDTDYPFPLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFSVVHNLLSTRYNSRIRVQTS 91
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V +P A +EREVWDM G+ HPDLRRI TD+GFEGH LRKDFP++G
Sbjct: 92 ADEVTRISPVVSPFPSAGRWEREVWDMSGVSSINHPDLRRISTDHGFEGHSLRKDFPLSG 151
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
+VE+ YDD K+VV P+E+ QE R +D SPWE
Sbjct: 152 YVEVRYDDPEKRVVSEPIEMTQEFRYFDSASPWEQ 186
>gi|56791594|gb|AAW30335.1| NADH dehydrogenase subunit 9 [Berberis bealei]
Length = 179
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 73/145 (50%), Positives = 96/145 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ E +
Sbjct: 35 FPLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTCADEVTRI 94
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A W+EREVWDM+G+ HPDLRRI TD+GFEGHPLRKD P++G+VE+ YD
Sbjct: 95 SPVVSPFPSAGWWEREVWDMFGVSSINHPDLRRISTDHGFEGHPLRKDLPLSGYVEVRYD 154
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSP 184
D K+VV P+E+ QE R +D SP
Sbjct: 155 DPEKRVVSEPIEMTQEFRYFDSASP 179
>gi|121998542|ref|YP_001003329.1| NADH (or F420H2) dehydrogenase subunit C [Halorhodospira halophila
SL1]
gi|218534291|sp|A1WXW5|NUOC_HALHL RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|121589947|gb|ABM62527.1| NADH dehydrogenase subunit C [Halorhodospira halophila SL1]
Length = 246
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 103/216 (47%), Gaps = 44/216 (20%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + E L + + F G + GE++ DV DL+++ + LRD F + D+
Sbjct: 1 MAEPESLLEQLRGHFGGRLTDCWLERGEVTADVRPADLLAVMTELRDGAEWRFEQLSDVA 60
Query: 62 GVDFLSRSNRFDVV------------------------------------------YHFL 79
GVD+ + + Y L
Sbjct: 61 GVDYAAYGQDEWITESATGTGFSRGVTEPGFGRLGLTGIYGVQSIEEQTGRRFAAVYQLL 120
Query: 80 SPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
S +N RLRV+ + PS+ GI+P A+W ERE +D+YGI FEGHPDLRRILTDY
Sbjct: 121 SLTHNHRLRVRCFAEDDDLPVLPSVTGIWPCANWAEREAFDLYGIVFEGHPDLRRILTDY 180
Query: 138 GFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
GF GHP RKDFP+ G VE YD + +VVY PVE+
Sbjct: 181 GFVGHPFRKDFPLIGNVEPRYDPEKGRVVYGPVEIE 216
>gi|28198173|ref|NP_778487.1| NADH dehydrogenase subunit C [Xylella fastidiosa Temecula1]
gi|81725066|sp|Q87EQ3|NUOC_XYLFT RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534353|sp|B2I786|NUOC_XYLF2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|28056243|gb|AAO28136.1| NADH-ubiquinone oxidoreductase NQO5 subunit [Xylella fastidiosa
Temecula1]
Length = 250
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 79/220 (35%), Positives = 107/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D +++ F GE+SLDV + ++C LRD F + DL
Sbjct: 1 MAEQTLSFVDCLMSRFPTVRVSVAQPRGEISLDVPVVEWCAVCKALRD--EFDFEQLSDL 58
Query: 61 CGVDFLSRSNRFD----------------------------------------------- 73
CGVD+L N
Sbjct: 59 CGVDYLGYGNAEWDTTDVSAQGFSRGVAGKAVGRFAWGEFPSAGSNDGTQPWDVPQERFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V+ H +S ++NRRLRV+ + V S+ ++PG +WFERE +D++GI FEGHPDLR
Sbjct: 119 VLAHLISYRHNRRLRVRCFASNDALPIVASLTDVWPGVNWFEREAFDLFGIVFEGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+TG VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFIGHPFRKDFPLTGNVEVRYDEEKKRVVYVPVT 218
>gi|54298770|ref|YP_125139.1| NADH dehydrogenase I chain C [Legionella pneumophila str. Paris]
gi|81822494|sp|Q5X1A9|NUOC_LEGPA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|53752555|emb|CAH13987.1| NADH dehydrogenase I chain C [Legionella pneumophila str. Paris]
Length = 227
Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 113/203 (55%), Gaps = 32/203 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + E L + + + + + ++ GE++++ + +L+ + LRD F +IDL
Sbjct: 1 MTKN-EYLIEKLQANLANHITELTSAYGEVTIECEVHNLLPVMIELRDREEFSFDQLIDL 59
Query: 61 CGVDFLSR------------------------------SNRFDVVYHFLSPKYNRRLRVK 90
CGVD+L RF VVYH LS K N RLRVK
Sbjct: 60 CGVDYLHYGDYDWETESATEHGFSRGVERQEAKAYAVNKPRFAVVYHLLSTKKNHRLRVK 119
Query: 91 IAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V E + V + A+WFERE +D+YGI F+GHPDLRR+LTDYGF GHP RKDFP
Sbjct: 120 LFVEESHLIVPSVHHLWKSANWFEREAYDLYGILFDGHPDLRRLLTDYGFIGHPFRKDFP 179
Query: 150 VTGFVELHYDDKVKKVVYRPVEL 172
++G VE+ YD K++KV+Y PV++
Sbjct: 180 LSGEVEMRYDAKLQKVIYAPVDI 202
>gi|52842985|ref|YP_096784.1| NADH dehydrogenase I, C subunit [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|81376642|sp|Q5ZRU0|NUOC_LEGPH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|52630096|gb|AAU28837.1| NADH dehydrogenase I, C subunit [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 227
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 112/203 (55%), Gaps = 32/203 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + E L + + + + ++ GE++++ + +L+ + LRD F +IDL
Sbjct: 1 MTKN-EYLIEKLQADLANHITELTSAYGEVTIECEVQNLLPVMIELRDREEFSFDQLIDL 59
Query: 61 CGVDFLSR------------------------------SNRFDVVYHFLSPKYNRRLRVK 90
CGVD+L RF VVYH LS K N RLRVK
Sbjct: 60 CGVDYLHYGDYDWETESATEHGFSRGVERQEAKAYAVNKPRFAVVYHLLSTKKNHRLRVK 119
Query: 91 IAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V E + V + A+WFERE +D+YGI F+GHPDLRR+LTDYGF GHP RKDFP
Sbjct: 120 LFVEESHLIVPSVHHLWKSANWFEREAYDLYGILFDGHPDLRRLLTDYGFIGHPFRKDFP 179
Query: 150 VTGFVELHYDDKVKKVVYRPVEL 172
++G VE+ YD K++KV+Y PV++
Sbjct: 180 LSGEVEMRYDAKLQKVIYAPVDI 202
>gi|319787441|ref|YP_004146916.1| NADH (or F420H2) dehydrogenase, subunit C [Pseudoxanthomonas
suwonensis 11-1]
gi|317465953|gb|ADV27685.1| NADH (or F420H2) dehydrogenase, subunit C [Pseudoxanthomonas
suwonensis 11-1]
Length = 250
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 106/220 (48%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + F G+ GE++L+V GDL++ C LRD F +IDL
Sbjct: 1 MAEPAATFAQRLRDRFPGATVIVAEPRGEVTLEVSAGDLLATCFALRD--ELGFEQLIDL 58
Query: 61 CGVDFLSRSNRFD----------------------------------------------- 73
CG+D++ +
Sbjct: 59 CGIDYMGYGSDEWDTDDVSSSGFSRGVEGKGPGRFGWGEKPSEQGEAGIEPVLVPERRFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H LS N+RLRV+ A+ PS+ ++ GA+WFERE +D+YGI FEGHPDLR
Sbjct: 119 AVTHLLSCANNQRLRVRCYAADDTLPVVPSLTRVWRGANWFEREAFDLYGIIFEGHPDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RI+TDYGF GHP RKDFP+ G VE+ YD++ K+VVY PV
Sbjct: 179 RIMTDYGFVGHPFRKDFPLIGNVEVRYDEERKRVVYEPVT 218
>gi|148361100|ref|YP_001252307.1| NADH dehydrogenase I subunit C [Legionella pneumophila str. Corby]
gi|296108430|ref|YP_003620131.1| NADH dehydrogenase I chain C [Legionella pneumophila 2300/99 Alcoy]
gi|218534316|sp|A5IHW1|NUOC_LEGPC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|148282873|gb|ABQ56961.1| NADH dehydrogenase I, C subunit [Legionella pneumophila str. Corby]
gi|295650332|gb|ADG26179.1| NADH dehydrogenase I chain C [Legionella pneumophila 2300/99 Alcoy]
Length = 227
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 112/203 (55%), Gaps = 32/203 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + E L + + + + ++ GE++++ + +L+ + LRD F +IDL
Sbjct: 1 MTKN-EYLIEKLQADLANHITELTSAYGEVTIECEVQNLLPVMIELRDREEFSFDQLIDL 59
Query: 61 CGVDFLSR------------------------------SNRFDVVYHFLSPKYNRRLRVK 90
CGVD+L RF VVYH LS + N RLRVK
Sbjct: 60 CGVDYLHYGDYDWETESATEHGFSRGVERQEAKAYAVNKPRFAVVYHLLSTQKNHRLRVK 119
Query: 91 IAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V E + V + A+WFERE +D+YGI F+GHPDLRR+LTDYGF GHP RKDFP
Sbjct: 120 LFVEESHLIVPSVHHLWKSANWFEREAYDLYGILFDGHPDLRRLLTDYGFIGHPFRKDFP 179
Query: 150 VTGFVELHYDDKVKKVVYRPVEL 172
++G VE+ YD K++KV+Y PV++
Sbjct: 180 LSGEVEMRYDAKLQKVIYAPVDI 202
>gi|328775177|gb|AEB39983.1| NADH dehydrogenase subunit 9 [Funaria hygrometrica]
Length = 116
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/106 (61%), Positives = 83/106 (78%)
Query: 82 KYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+YN R+RV+ +V E + S V I+P A W+EREVWDM+G++F HPDLRRILTDYGFEG
Sbjct: 1 QYNSRIRVQTSVDEITPICSAVSIFPSAGWWEREVWDMFGVYFSNHPDLRRILTDYGFEG 60
Query: 142 HPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEG 187
HPLRKDFP++G+VE+ YDD K+VV P+E+ QE R +DF SPWE
Sbjct: 61 HPLRKDFPLSGYVEVRYDDSEKRVVSEPIEMTQEFRYFDFASPWEQ 106
>gi|56791602|gb|AAW30339.1| NADH dehydrogenase subunit 9 [Eschscholzia californica]
Length = 165
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 71/145 (48%), Positives = 96/145 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 21 FQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 80
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM+G+ HPDLRRI TD+GFEGHPLRKD P++G+VE+ YD
Sbjct: 81 SPVVSPFPSAGRWEREVWDMFGVSSINHPDLRRISTDHGFEGHPLRKDLPLSGYVEVRYD 140
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSP 184
D K+VV P+E+ QE R +D SP
Sbjct: 141 DPEKRVVSEPIEMTQEFRYFDSASP 165
>gi|218534347|sp|B0U1W7|NUOC_XYLFM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
Length = 249
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 105/220 (47%), Gaps = 51/220 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + + F GE++LDV + ++C LRD F + DL
Sbjct: 1 MAEQTLSFVDCLTSRFPTVRVSVAQPRGEITLDVPVVEWCAVCKGLRD--EFDFEQLSDL 58
Query: 61 CGVDFLSRSNRFD----------------------------------------------- 73
CGVD+L N
Sbjct: 59 CGVDYLGYGNAEWDTTGVSAQGFSRGVAGKAVGRFAWGEFPSAGTNDGTQPWDVPQERFA 118
Query: 74 VVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V+ H +S ++NRRLRV+ + V S+ ++PG +WFERE +D++GI FEGH DLR
Sbjct: 119 VLAHLISYRHNRRLRVRCFASNDALPIVASLTDVWPGVNWFEREAFDLFGIVFEGHLDLR 178
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RILTDYGF GHP RKDFP+TG VE+ YD++ K+VVY PV
Sbjct: 179 RILTDYGFIGHPFRKDFPLTGNVEVRYDEEKKRVVYVPVT 218
>gi|289207895|ref|YP_003459961.1| NADH (or F420H2) dehydrogenase, subunit C [Thioalkalivibrio sp.
K90mix]
gi|288943526|gb|ADC71225.1| NADH (or F420H2) dehydrogenase, subunit C [Thioalkalivibrio sp.
K90mix]
Length = 239
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 110/241 (45%), Gaps = 54/241 (22%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + ++ D + ++ + E+++D+ LRD F +IDL
Sbjct: 1 MAEQ-DNWIDALRAELGDALETVTEAYDEVTVDIRPQAWREAAEKLRD--AFGFEMLIDL 57
Query: 61 CGVDFLSRSNRFD---------------------------------------VVYHFLSP 81
CGVD+L V LS
Sbjct: 58 CGVDYLEYGQDEWGTESATNTGFSRGVEPATSGRFTFDDAPEDSLWDGPRFTVAVQLLSI 117
Query: 82 KYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
++NRRLR++ +A+ V S+V ++ A+WFERE +D++GI F GHPDLRRILTDYGF
Sbjct: 118 QHNRRLRMRAWLADDEFPEVESLVEVWASANWFEREAFDLFGILFSGHPDLRRILTDYGF 177
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM----------QEHRDYDFLSPWEGVN 189
GHP RKDFP+ G VE+ YD + +VVY+PV + +HR + P EG
Sbjct: 178 VGHPFRKDFPLIGHVEMRYDAEQARVVYQPVTIEPRVLVPKVIRDDHRYSEGEKPGEGAE 237
Query: 190 S 190
+
Sbjct: 238 N 238
>gi|56791606|gb|AAW30341.1| NADH dehydrogenase subunit 9 [Lonicera sp. Bergthorsson 0301]
Length = 179
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 73/145 (50%), Positives = 96/145 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 35 FQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRI 94
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 95 SPVVSPFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYD 154
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSP 184
D K+VV P+E+ QE R +D SP
Sbjct: 155 DPEKRVVSEPIEMTQEFRYFDSASP 179
>gi|56791600|gb|AAW30338.1| NADH dehydrogenase subunit 9 [Platanus occidentalis]
Length = 179
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 72/146 (49%), Positives = 96/146 (65%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 34 FQLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 93
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM G+ HPDLRRI TD+GFEGHPLRKD P++G+VE+ YD
Sbjct: 94 SPVVSPFPSAGRWEREVWDMSGVSSINHPDLRRISTDHGFEGHPLRKDLPLSGYVEVRYD 153
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPW 185
D K+VV P+E+ QE R +D SPW
Sbjct: 154 DPEKRVVSEPIEMTQEFRYFDSASPW 179
>gi|225468996|ref|XP_002263031.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 315
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 71/148 (47%), Positives = 97/148 (65%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+ GVD SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 164 FQLLCFLKLHTYTRVQVSIDIWGVDHPSRKRRFEVVYNLLSTQYNSRIRVQTSADEVTRI 223
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
S+V ++P + +EREVWDM+G+ H DL R+ TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 224 SSVVSLFPSSVRWEREVWDMFGVSSINHLDLHRLSTDYGFEGHPLRKDLPLSGYVEVRYD 283
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPWEG 187
D K+VV P+E+ QE R +D SPWE
Sbjct: 284 DLEKRVVSEPIEMTQEFRYFDSASPWEQ 311
>gi|56791586|gb|AAW30331.1| NADH dehydrogenase subunit 9 [Calycanthus floridus]
Length = 177
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 33 FQLLCFLKFHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 92
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A W+EREVWDM G+ HPDLRRI TD+GFEGHPLRKD P++G+VE+ YD
Sbjct: 93 SPVVSPFPSAGWWEREVWDMSGVSSINHPDLRRISTDHGFEGHPLRKDLPLSGYVEVRYD 152
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSP 184
D K+VV P+E+ QE R +D SP
Sbjct: 153 DPEKRVVSEPIEMTQEFRYFDSASP 177
>gi|56791592|gb|AAW30334.1| NADH dehydrogenase subunit 9 [Liriodendron tulipifera]
Length = 179
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 35 FQLLCFLKFHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 94
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A W+EREVWDM G+ HPDLRRI TD+GFEGHPLRKD P++G+VE+ YD
Sbjct: 95 SPVVSPFPSAGWWEREVWDMSGVSSINHPDLRRISTDHGFEGHPLRKDLPLSGYVEVRYD 154
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSP 184
D K+VV P+E+ QE R +D SP
Sbjct: 155 DPEKRVVSEPIEMTQEFRYFDSASP 179
>gi|56791604|gb|AAW30340.1| NADH dehydrogenase subunit 9 [Agave attenuata]
Length = 179
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 35 FPLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 94
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM G+ HPDLRRI TD+GFEGHPLRKDFP++G+VE+ YD
Sbjct: 95 SPVVSPFPSAGRWEREVWDMSGVSSINHPDLRRISTDHGFEGHPLRKDFPLSGYVEVRYD 154
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSP 184
D K+VV P+E+ QE R +D SP
Sbjct: 155 DPEKRVVSEPIEMTQEFRYFDSASP 179
>gi|54295616|ref|YP_128031.1| NADH dehydrogenase I chain C [Legionella pneumophila str. Lens]
gi|81822301|sp|Q5WT22|NUOC_LEGPL RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|53755448|emb|CAH16944.1| NADH dehydrogenase I chain C [Legionella pneumophila str. Lens]
gi|307611656|emb|CBX01347.1| NADH dehydrogenase I chain C [Legionella pneumophila 130b]
Length = 227
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 112/203 (55%), Gaps = 32/203 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + E L + + + + ++ GE++++ + +L+ + LRD F +IDL
Sbjct: 1 MTKN-EYLIEKLQVDLANHITELTSAYGEVTIECEVQNLLPVMIELRDREEFSFDELIDL 59
Query: 61 CGVDFLSR------------------------------SNRFDVVYHFLSPKYNRRLRVK 90
CGVD+L RF VVYH LS K N RLRVK
Sbjct: 60 CGVDYLHYGDYDWETESATEHGFSRGVERQEAKAYAVNKPRFAVVYHLLSTKKNHRLRVK 119
Query: 91 IAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V E + V + A+WFERE +D+YGI F+GHPDLRR+LTDYGF GHP RKDFP
Sbjct: 120 LFVEESHLIVPSVHHLWKSANWFEREAYDLYGILFDGHPDLRRLLTDYGFIGHPFRKDFP 179
Query: 150 VTGFVELHYDDKVKKVVYRPVEL 172
++G VE+ YD K++KV+Y PV++
Sbjct: 180 LSGEVEMRYDAKLQKVIYAPVDI 202
>gi|56791584|gb|AAW30330.1| NADH dehydrogenase subunit 9 [Asarum sp. Qiu 96018]
Length = 179
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/152 (48%), Positives = 96/152 (63%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+ + L L FL+ + ID+ GVD SR RF VVY+ LS +YN R+RV+ +
Sbjct: 28 NTNTDYLFQLLCFLKFHTYTRVQVSIDISGVDQPSRKRRFSVVYNLLSTRYNSRIRVQTS 87
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
E + +V +P A W+EREVWDM G+ HPDLRRI TDYGFEGHPLRKD P++G
Sbjct: 88 ADEVTRISPVVSPFPSAGWWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDLPLSG 147
Query: 153 FVELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
+VE+ YDD K+VV P+E+ QE +D SP
Sbjct: 148 YVEVRYDDPEKRVVSEPIEMTQELSYFDSASP 179
>gi|147801824|emb|CAN77857.1| hypothetical protein VITISV_001361 [Vitis vinifera]
Length = 154
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/146 (47%), Positives = 96/146 (65%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+ GVD SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 6 FQLLCFLKLHTYTRVQVSIDIWGVDHPSRKRRFEVVYNLLSTQYNSRIRVQTSADEVTRI 65
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
S+V ++P + +EREVWDM+G+ H DL R+ TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 66 SSVVSLFPSSVRWEREVWDMFGVSSINHLDLHRLSTDYGFEGHPLRKDLPLSGYVEVRYD 125
Query: 160 DKVKKVVYRPVELMQEHRDYDFLSPW 185
D K+VV P+E+ QE R +D SPW
Sbjct: 126 DLEKRVVSEPIEMTQEFRYFDSASPW 151
>gi|115610726|ref|XP_790261.2| PREDICTED: similar to LOC496233 protein [Strongylocentrotus
purpuratus]
Length = 151
Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/137 (51%), Positives = 96/137 (70%), Gaps = 7/137 (5%)
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
++VY+ LS +YN R+R+K E +V S+V ++ ADW EREVWDMYG+FF HPDLRR
Sbjct: 13 NLVYNLLSLRYNERIRIKTYTDELSAVDSLVPVFKAADWLEREVWDMYGVFFANHPDLRR 72
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW------- 185
ILTDYGFEGHPLRKDFP++GFVE+ YDD++K+VV P+E+ QE R +D SPW
Sbjct: 73 ILTDYGFEGHPLRKDFPLSGFVEVRYDDELKRVVAEPLEMTQEFRKFDLSSPWESFPNHR 132
Query: 186 EGVNSLFAKEDSKDDMS 202
E + ++++ S
Sbjct: 133 EPAPEQLEQGKTEEEKS 149
>gi|307579275|gb|ADN63244.1| NADH dehydrogenase subunit C [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 238
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 77/207 (37%), Positives = 102/207 (49%), Gaps = 51/207 (24%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
+ F GE+SLDV + ++C LRD F + DLCGVD+L N
Sbjct: 2 SRFPTVRVSVAQPRGEISLDVPVVEWCAVCKALRD--EFDFEQLSDLCGVDYLGYGNAEW 59
Query: 74 -----------------------------------------------VVYHFLSPKYNRR 86
V+ H +S ++NRR
Sbjct: 60 DTTDVSAQGFSRGVAGKAVGRFAWGEFPSAGSNDGTQPWDVPQERFAVLAHLISYRHNRR 119
Query: 87 LRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
LRV+ + V S+ ++PG +WFERE +D++GI FEGHPDLRRILTDYGF GHP
Sbjct: 120 LRVRCFASNDALPIVASLTDVWPGVNWFEREAFDLFGIVFEGHPDLRRILTDYGFIGHPF 179
Query: 145 RKDFPVTGFVELHYDDKVKKVVYRPVE 171
RKDFP+TG VE+ YD++ K+VVY PV
Sbjct: 180 RKDFPLTGNVEVRYDEEKKRVVYVPVT 206
>gi|269469170|gb|EEZ80712.1| NADH dehydrogenase I chain C [uncultured SUP05 cluster bacterium]
Length = 204
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 32/197 (16%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+EDL + ++ F V + EL+L ++ D++ C LRD F ++DLCGVD
Sbjct: 1 MEDLKEQLIEEFGED--SLVEAFSELTLTINVNDIIKTCLKLRD--FFFFDTLVDLCGVD 56
Query: 65 FLSRSN---------------------------RFDVVYHFLSPKYNRRLRVKIAVAEGK 97
+L+ RF VVYH LS N+RLRVK V E +
Sbjct: 57 YLTYGQSDWDAGASSSGFSRGREAQGGDDRHSERFAVVYHLLSVSKNQRLRVKSFVDEAE 116
Query: 98 SV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+ S+ I+ ADW+ERE +D+ GI FE H DLRRILTDYGF GHPLRKDFP+ G VE+
Sbjct: 117 PIIESVTDIWASADWYEREAFDLMGILFENHVDLRRILTDYGFVGHPLRKDFPMIGEVEM 176
Query: 157 HYDDKVKKVVYRPVELM 173
YD+ + +VVY PV +
Sbjct: 177 RYDEDLGRVVYEPVSIE 193
>gi|11466629|ref|NP_066312.1| NADH dehydrogenase subunit 9 [Malawimonas jakobiformis]
gi|10178667|gb|AAG13679.1|AF295546_5 NADH dehydrogenase subunit 9 [Malawimonas jakobiformis]
Length = 187
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
Query: 11 YIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
YI + S N+ E+ L + L+ L L+ + + ++ID+ +D+ R+N
Sbjct: 16 YINSFLSF---NYFNNKKEIYLLISNIHLLRLLYILKKNTNILLKSLIDIICIDYPERTN 72
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
RF++ YH LS KYN R+ +K + E SI+ IYP A W EREVWD YG+FF+ + DL
Sbjct: 73 RFELNYHLLSLKYNIRINIKTYIDEISLNNSIIKIYPNAMWSEREVWDSYGVFFKNNNDL 132
Query: 131 RRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
RRILTDYGFEG P+RKDFP++G+ E++YDD K + Y+ + L Q++R++D+ S W
Sbjct: 133 RRILTDYGFEGFPMRKDFPLSGYNEIYYDDLNKSIYYQKLYLSQQYRNFDYKSAW 187
>gi|89257088|ref|YP_514450.1| NADH dehydrogenase I [Francisella tularensis subsp. holarctica LVS]
gi|167009480|ref|ZP_02274411.1| NADH dehydrogenase (ubiquinone) [Francisella tularensis subsp.
holarctica FSC200]
gi|122500211|sp|Q2A1F2|NUOC_FRATH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|89144919|emb|CAJ80267.1| NADH dehydrogenase I [Francisella tularensis subsp. holarctica LVS]
Length = 214
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M K++D + I SG S GE++ + D+ + L+ F + D
Sbjct: 1 MSTKLQDHFEKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIILVDSVSDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGRVVYEPVEID 203
>gi|148244391|ref|YP_001219085.1| NADH dehydrogenase I chain C [Candidatus Vesicomyosocius okutanii
HA]
gi|218534339|sp|A5CXF9|NUOC_VESOH RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|146326218|dbj|BAF61361.1| NADH dehydrogenase I chain C [Candidatus Vesicomyosocius okutanii
HA]
Length = 204
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 106/197 (53%), Gaps = 32/197 (16%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++DL +V F V S EL+L V +++ C LRD F +IDLCGVD
Sbjct: 1 MQDLKTSLVEVFGK--TNLVESFDELTLTVGSQNIIKTCLKLRD--FFSFDTLIDLCGVD 56
Query: 65 FLS---------------------------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGK 97
+L+ RF VVYH LS N+R+RVK V E +
Sbjct: 57 YLTYGQSDWNGNASASGFSRGRSHQGLKDIHEERFAVVYHLLSVSKNKRIRVKSFVDEVE 116
Query: 98 SV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+ S+ I+ ADW+ERE +D+ GI FE H DLRRILTDYGF GHPLRKDFP+ G VE+
Sbjct: 117 PIIKSVTDIWASADWYEREAFDLMGILFENHTDLRRILTDYGFTGHPLRKDFPMIGEVEM 176
Query: 157 HYDDKVKKVVYRPVELM 173
YD+ + +V+Y V +
Sbjct: 177 RYDEDLCRVIYEKVSIE 193
>gi|118498239|ref|YP_899289.1| NADH dehydrogenase I, C subunit [Francisella tularensis subsp.
novicida U112]
gi|194324423|ref|ZP_03058196.1| NADH (or f420h2) dehydrogenase, subunit c family [Francisella
tularensis subsp. novicida FTE]
gi|218534281|sp|A0Q8H0|NUOC_FRATN RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|118424145|gb|ABK90535.1| NADH dehydrogenase I, C subunit [Francisella novicida U112]
gi|194321488|gb|EDX18973.1| NADH (or f420h2) dehydrogenase, subunit c family [Francisella
tularensis subsp. novicida FTE]
Length = 214
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M K++D D I SG S GE++ + D+ + L+ F + D
Sbjct: 1 MSTKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++ A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIILVDSVSDLWSSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGRVVYEPVEID 203
>gi|187930990|ref|YP_001890974.1| NADH dehydrogenase I, C subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224456274|ref|ZP_03664747.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
MA00-2987]
gi|218534272|sp|B2SEV1|NUOC_FRATM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|187711899|gb|ACD30196.1| NADH dehydrogenase I, C subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|282158321|gb|ADA77712.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
NE061598]
Length = 214
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M K++D D I SG S GE++ + D+ + L+ F + D
Sbjct: 1 MSTKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIILVDSVSDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGRVVYEPVEID 203
>gi|118602277|ref|YP_903492.1| NADH (or F420H2) dehydrogenase, subunit C [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|218534343|sp|A1AVR4|NUOC_RUTMC RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|118567216|gb|ABL02021.1| NADH dehydrogenase subunit C [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 204
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 83/197 (42%), Positives = 110/197 (55%), Gaps = 32/197 (16%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++DL ++ F R V + GEL+L VD D++ C LRD F +IDLCGVD
Sbjct: 1 MQDLKASLIKVFGE--RHLVEAFGELTLIVDSQDIIKTCLKLRD--FFYFDTLIDLCGVD 56
Query: 65 FLS---------------------------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGK 97
+L+ RF VVYH LS N+R+RVK V E +
Sbjct: 57 YLTYGQSDWNGNASASGFSRGRNHQGSKDRHEQRFVVVYHLLSVSKNKRIRVKSFVDEAE 116
Query: 98 SV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+ S+ I+ ADW+ERE +D+ GI FE H DLRRILTDYGF+GHPLRKDFP+ G VE+
Sbjct: 117 PIIKSVTDIWASADWYEREAFDLMGILFENHTDLRRILTDYGFKGHPLRKDFPMIGEVEM 176
Query: 157 HYDDKVKKVVYRPVELM 173
YD+ + +VVY V +
Sbjct: 177 RYDEDLGRVVYEKVSIE 193
>gi|134301248|ref|YP_001121216.1| NADH dehydrogenase I subunit C [Francisella tularensis subsp.
tularensis WY96-3418]
gi|218534286|sp|A4IVZ4|NUOC_FRATW RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|134049025|gb|ABO46096.1| NADH dehydrogenase I subunit C [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 214
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M K++D D I SG S GE++ + D+ + L+ F + D
Sbjct: 1 MSTKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIILVDSVSDLWPSANWTEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGRVVYEPVEID 203
>gi|312088396|ref|XP_003145846.1| hypothetical protein LOAG_10271 [Loa loa]
gi|307758994|gb|EFO18228.1| hypothetical protein LOAG_10271 [Loa loa]
Length = 144
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/121 (52%), Positives = 87/121 (71%)
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
V+Y LS ++N R+RV+ E + SI I+ GA+W+EREV+DMYG++F HPDLRRI
Sbjct: 1 VIYALLSIRFNARIRVRTYTDEIAPLESITSIFKGANWYEREVYDMYGVWFNNHPDLRRI 60
Query: 134 LTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFA 193
LTDYGFEGHP RKDFP++G+VEL YD ++ + VY P EL QE R +D +PWE + +
Sbjct: 61 LTDYGFEGHPFRKDFPLSGYVELRYDSELGRCVYEPTELAQEFRKFDLKTPWESMPNFRD 120
Query: 194 K 194
+
Sbjct: 121 E 121
>gi|332678975|gb|AEE88104.1| NADH-ubiquinone oxidoreductase chain C [Francisella cf. novicida
Fx1]
Length = 214
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M K++D D I SG S GE++ + D+ + L+ F + D
Sbjct: 1 MSTKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++ A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDARIILVDSVSDLWSSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGRVVYEPVEID 203
>gi|208780266|ref|ZP_03247608.1| respiratory-chain NADH dehydrogenase, 30 kd subunit domain
[Francisella novicida FTG]
gi|208743915|gb|EDZ90217.1| respiratory-chain NADH dehydrogenase, 30 kd subunit domain
[Francisella novicida FTG]
Length = 214
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M K++D D I SG S GE++ + D+ + L+ F + D
Sbjct: 1 MSTKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLAYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++ A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIILVDSVSDLWSSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGRVVYEPVEID 203
>gi|290952991|ref|ZP_06557612.1| NADH-quinone oxidoreductase subunit C [Francisella tularensis
subsp. holarctica URFT1]
gi|295313811|ref|ZP_06804384.1| NADH-quinone oxidoreductase subunit C [Francisella tularensis
subsp. holarctica URFT1]
Length = 214
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M K++D + I SG S GE++ + D+ + L+ F + D
Sbjct: 1 MSTKLQDHFEKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIILVDSVSDLWPSANWVEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGRVVYEPVEID 203
>gi|254496123|ref|ZP_05109022.1| NADH dehydrogenase I, C subunit [Legionella drancourtii LLAP12]
gi|254354664|gb|EET13300.1| NADH dehydrogenase I, C subunit [Legionella drancourtii LLAP12]
Length = 225
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 108/203 (53%), Gaps = 32/203 (15%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + L + + + + + E++++ D +L +L LRD F +IDL
Sbjct: 1 MTKN-DYLVEKLKTELASHMNAVTVAYDEVTIECDVVNLKTLMLELRDLDAFSFDQLIDL 59
Query: 61 CGVDFLSR------------------------------SNRFDVVYHFLSPKYNRRLRVK 90
C VD+L RF VVYH LS N R+RVK
Sbjct: 60 CAVDYLLYGEYDWETDSATENGFSRGVERQDAKAYTLDKPRFAVVYHLLSTNKNHRVRVK 119
Query: 91 IAVAEGKSVPSIVGIYP-GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V E + V GA+WFERE +D+YG+ FEGHPDLRRILTDYGF GHP RKDFP
Sbjct: 120 VFVDEKHLIVPSVHHIWKGANWFEREAYDLYGVLFEGHPDLRRILTDYGFIGHPFRKDFP 179
Query: 150 VTGFVELHYDDKVKKVVYRPVEL 172
++G VE+ YD K++KV+Y PV++
Sbjct: 180 LSGQVEMRYDAKLQKVIYAPVDI 202
>gi|289606895|emb|CBI60959.1| unnamed protein product [Sordaria macrospora]
Length = 94
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/84 (63%), Positives = 66/84 (78%)
Query: 105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
A W EREV+DMYG+ F G+ DLRRILTDYGF GHPLRKDFP+TG+VE+ Y ++ K+
Sbjct: 11 HLVHAGWLEREVYDMYGVLFTGNADLRRILTDYGFRGHPLRKDFPLTGYVEMRYSEEAKR 70
Query: 165 VVYRPVELMQEHRDYDFLSPWEGV 188
VVY PV+L Q+ R +DF+SPWEG
Sbjct: 71 VVYEPVKLAQDFRTFDFMSPWEGA 94
>gi|71897768|ref|ZP_00679994.1| NADH (or F420H2) dehydrogenase, subunit C [Xylella fastidiosa
Ann-1]
gi|71732323|gb|EAO34377.1| NADH (or F420H2) dehydrogenase, subunit C [Xylella fastidiosa
Ann-1]
Length = 227
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 100/194 (51%), Gaps = 51/194 (26%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD------------- 73
GE++LDV + ++C LRD F + DLCGVD+L N
Sbjct: 5 HGEITLDVPVVEWCAVCKGLRD--EFDFEQLSDLCGVDYLGYGNAEWDTTDVSAQGFSRG 62
Query: 74 ----------------------------------VVYHFLSPKYNRRLRVKIAVAEG--K 97
V+ H +S ++NRRLRV+ +
Sbjct: 63 VAGKAVGRFAWGEFPSAGSNDGTQPWDVPQERFAVLAHLISYRHNRRLRVRCFASNDALP 122
Query: 98 SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
V S+ ++PG +WFERE +D++GI FEGHPDLRRILTDYGF GHP RKDFP+TG VE+
Sbjct: 123 IVASLTDVWPGVNWFEREAFDLFGIVFEGHPDLRRILTDYGFIGHPFRKDFPLTGNVEVR 182
Query: 158 YDDKVKKVVYRPVE 171
YD++ K+VVY PV
Sbjct: 183 YDEEKKRVVYVPVT 196
>gi|261856548|ref|YP_003263831.1| NADH (or F420H2) dehydrogenase, subunit C [Halothiobacillus
neapolitanus c2]
gi|261837017|gb|ACX96784.1| NADH (or F420H2) dehydrogenase, subunit C [Halothiobacillus
neapolitanus c2]
Length = 244
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 42/208 (20%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + + + ++ E++++V + L P F +DLCG+D+L
Sbjct: 11 LKPALESVLGDLLVNLTVALDEITIEVAAAHWQEVAKRLASAPETHFDQCVDLCGIDYLE 70
Query: 68 RSNRFD----------------------------------------VVYHFLSPKYNRRL 87
+ VV H LS K+N R+
Sbjct: 71 FGRQEWAGEESVSYAGYSRGVEPASNARLKFGDEMRSGNQDRPRFAVVAHLLSYKHNWRV 130
Query: 88 RVKIAVAEGKSVPSIVGIYPGA--DWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
RV+I + + + +WFERE +D++GI F+ HPD+RRILTDYGF GHP+R
Sbjct: 131 RVRIPCVDAELPTVPSVVSVWPVVNWFEREAFDLFGILFDDHPDMRRILTDYGFVGHPMR 190
Query: 146 KDFPVTGFVELHYDDKVKKVVYRPVELM 173
KDFP+ G VE+ +D + +VVY PV +
Sbjct: 191 KDFPLIGNVEVRFDPEKNRVVYEPVSIE 218
>gi|227822751|ref|YP_002826723.1| NADH dehydrogenase subunit C1 [Sinorhizobium fredii NGR234]
gi|227341752|gb|ACP25970.1| NADH dehydrogenase subunit C1 [Sinorhizobium fredii NGR234]
Length = 187
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 63/155 (40%), Positives = 85/155 (54%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + I F +V S G V +V LC FL++ P F + D+
Sbjct: 1 MSVEASVISTLISERFGEAVEELGVSHGLHGFAVPPDKIVELCRFLKEHPALRFDFLSDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
CGVD + R++ VYH S R+R+K + + VPS+ G++ A+W ERE WDMY
Sbjct: 61 CGVDHFPEAPRYEAVYHLYSLPNKWRIRIKCRLGDPPLVPSVTGVWRTANWHEREAWDMY 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
GI FEGHPDLRRI GFEG P RKDFP+ G+ +
Sbjct: 121 GISFEGHPDLRRIYMWEGFEGFPQRKDFPLRGYKD 155
>gi|241667717|ref|ZP_04755295.1| NADH dehydrogenase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 215
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M +++D + + +G + GE+++ + D+ + L+ F + D
Sbjct: 1 MSARLQDHFNNVEKILNGFGVECYVAYGEINISIKDQRDIHLVLKKLK--KEYHFKQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 ITAVDYLTYGQSDWQVGKVVSQTGFSRGRQQGFKTADVNNRFEIIYQLLSMANNVRVRVK 118
Query: 91 IAVAEGK--SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + V S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIIMVDSVEDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + KVVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGKVVYEPVEID 203
>gi|167627155|ref|YP_001677655.1| NADH dehydrogenase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|218534285|sp|B0TWP6|NUOC_FRAP2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|167597156|gb|ABZ87154.1| NADH dehydrogenase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 215
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M +++D + + +G + GE+++ + D+ + L+ F + D
Sbjct: 1 MSARLQDHFNNVEKILNGFSVECYVAYGEINISIKDQRDIHLVLKKLK--KEYHFKQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 ITAVDYLTYGQSDWQVGKVVSQTGFSRGRQQGFKTADVNNRFEIIYQLLSMANNVRVRVK 118
Query: 91 IAVAEGK--SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + V S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIIMVDSVEDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD+ + KVVY PVE+
Sbjct: 179 PQTGYVEMRYDENLGKVVYEPVEID 203
>gi|190575276|ref|YP_001973121.1| NADH dehydrogenase subunit C [Stenotrophomonas maltophilia K279a]
gi|194366602|ref|YP_002029212.1| NADH dehydrogenase subunit C [Stenotrophomonas maltophilia R551-3]
gi|254525186|ref|ZP_05137241.1| NADH-ubiquinone oxidoreductase Nqo5 subunit [Stenotrophomonas sp.
SKA14]
gi|218534323|sp|B4SQT4|NUOC_STRM5 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534324|sp|B2FNX7|NUOC_STRMK RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|190013198|emb|CAQ46831.1| putative respiratory-chain NADH dehydrogenase, 30 kDa subunit
[Stenotrophomonas maltophilia K279a]
gi|194349406|gb|ACF52529.1| NADH dehydrogenase (ubiquinone) [Stenotrophomonas maltophilia
R551-3]
gi|219722777|gb|EED41302.1| NADH-ubiquinone oxidoreductase Nqo5 subunit [Stenotrophomonas sp.
SKA14]
Length = 249
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 95/221 (42%), Gaps = 53/221 (23%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F+G+ V GE++L+V + + LRD F +DL
Sbjct: 1 MAEQ-ASFIDRLSARFAGAKVIVVEPRGEVTLEVPAAEWHATALALRD--EFGFEQAVDL 57
Query: 61 CGVDFLSRSNRFDVVYHFLS---------------------------------------- 80
CGVD+L + S
Sbjct: 58 CGVDYLGYGSDEWDTADVSSQGFSRGVEGKAQGRFAWGEFPTEENGADGARPQHMPTQRF 117
Query: 81 ----------PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
LR V S+ GI+PG +WFERE +D+YG+ FEGHPDL
Sbjct: 118 AVVAQLRSYQHNLMMHLRCFAPDEALPVVSSLTGIWPGLNWFEREAFDLYGVIFEGHPDL 177
Query: 131 RRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RRILTDYGF GHP RKDFP+ G VE+ YD++ K+V+Y PV
Sbjct: 178 RRILTDYGFVGHPFRKDFPLIGNVEVRYDEEKKRVIYEPVT 218
>gi|291298800|ref|YP_003510078.1| NADH (or F420H2) dehydrogenase subunit C [Stackebrandtia
nassauensis DSM 44728]
gi|290568020|gb|ADD40985.1| NADH (or F420H2) dehydrogenase, subunit C [Stackebrandtia
nassauensis DSM 44728]
Length = 213
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 6 EDLGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++L D + + + +++ V GEL++ V + ++C LRD + F + GVD
Sbjct: 44 DELVDSLSSEVDTDAIQAVVVDRGELTIHVAPNRVKAVCQALRDSENLRFELCNSVSGVD 103
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIF 123
+ ++NR V YH S + RR+RV+ AV+ E V S+ +YP ADW ERE +DM+G+
Sbjct: 104 YPEQTNRLHVTYHLTSMTFRRRVRVETAVSIEDPHVDSVTEVYPTADWQERETYDMFGVV 163
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVELHYDDK 161
F+GHP+L RIL ++GHP RKD+P+ G VE D +
Sbjct: 164 FDGHPNLTRILMPDDWQGHPQRKDYPLGGIPVEYKNDAE 202
>gi|262216826|gb|ACY37794.1| NADH dehydrogenase subunit 9 [Phytophthora palmivora]
gi|262216829|gb|ACY37796.1| NADH dehydrogenase subunit 9 [Phytophthora gonapodyides]
Length = 116
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 68/111 (61%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL+VKI + E + V SIV IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKVKITINEVQPVDSIVPIYKAANWCEREVWDMFGIFFSNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY PV L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPVNLAQQYRLFEFNNPWD 111
>gi|182680807|ref|YP_001828967.1| NADH dehydrogenase subunit C [Xylella fastidiosa M23]
gi|182630917|gb|ACB91693.1| NADH (or F420H2) dehydrogenase, subunit C [Xylella fastidiosa M23]
Length = 228
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 100/194 (51%), Gaps = 51/194 (26%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD------------- 73
GE+SLDV + ++C LRD F + DLCGVD+L N
Sbjct: 5 RGEISLDVPVVEWCAVCKALRD--EFDFEQLSDLCGVDYLGYGNAEWDTTDVSAQGFSRG 62
Query: 74 ----------------------------------VVYHFLSPKYNRRLRVKIAVAEG--K 97
V+ H +S ++NRRLRV+ +
Sbjct: 63 VAGKAVGRFAWGEFPSAGSNDGTQPWDVPQERFAVLAHLISYRHNRRLRVRCFASNDALP 122
Query: 98 SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
V S+ ++PG +WFERE +D++GI FEGHPDLRRILTDYGF GHP RKDFP+TG VE+
Sbjct: 123 IVASLTDVWPGVNWFEREAFDLFGIVFEGHPDLRRILTDYGFIGHPFRKDFPLTGNVEVR 182
Query: 158 YDDKVKKVVYRPVE 171
YD++ K+VVY PV
Sbjct: 183 YDEEKKRVVYVPVT 196
>gi|262216814|gb|ACY37786.1| NADH dehydrogenase subunit 9 [Phytophthora cinnamomi]
Length = 113
Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 66/111 (59%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL+VKI + E + + SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKVKITINELQPIDSIISIYKAANWCEREVWDMFGIFFSNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F SPW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRLFEFNSPWD 111
>gi|115315445|ref|YP_764168.1| NADH dehydrogenase (ubiquinone) [Francisella tularensis subsp.
holarctica OSU18]
gi|254368324|ref|ZP_04984342.1| hypothetical protein FTHG_01692 [Francisella tularensis subsp.
holarctica 257]
gi|254368967|ref|ZP_04984980.1| NADH dehydrogenase [Francisella tularensis subsp. holarctica
FSC022]
gi|122324570|sp|Q0BK53|NUOC_FRATO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|115130344|gb|ABI83531.1| NADH dehydrogenase (ubiquinone) [Francisella tularensis subsp.
holarctica OSU18]
gi|134254132|gb|EBA53226.1| hypothetical protein FTHG_01692 [Francisella tularensis subsp.
holarctica 257]
gi|157121888|gb|EDO66058.1| NADH dehydrogenase [Francisella tularensis subsp. holarctica
FSC022]
Length = 216
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 34/204 (16%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIIDL 60
K++D + I SG S GE++ + D+ + L+ F + D+
Sbjct: 4 STKLQDHFEKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTDV 61
Query: 61 CGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVKI 91
VD+L+ NRF+++Y LS N R+RVK
Sbjct: 62 TAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVKC 121
Query: 92 AVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDFP
Sbjct: 122 KLKDAQIILVDSVSDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDFP 181
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
TG+VE+ YD+ + +VVY PVE+
Sbjct: 182 QTGYVEMRYDENLGRVVYEPVEID 205
>gi|56707213|ref|YP_169109.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110669683|ref|YP_666240.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
FSC198]
gi|254371429|ref|ZP_04987430.1| NADH dehydrogenase [Francisella tularensis subsp. tularensis
FSC033]
gi|254373580|ref|ZP_04989066.1| NADH dehydrogenase I [Francisella tularensis subsp. novicida
GA99-3549]
gi|254874051|ref|ZP_05246761.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
MA00-2987]
gi|81598107|sp|Q5NIN3|NUOC_FRATT RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|123359659|sp|Q14K36|NUOC_FRAT1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|56603705|emb|CAG44666.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320016|emb|CAL08049.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
FSC198]
gi|151569668|gb|EDN35322.1| NADH dehydrogenase [Francisella tularensis subsp. tularensis
FSC033]
gi|151571304|gb|EDN36958.1| NADH dehydrogenase I [Francisella novicida GA99-3549]
gi|254840050|gb|EET18486.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
MA00-2987]
Length = 216
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 34/204 (16%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIIDL 60
K++D D I SG S GE++ + D+ + L+ F + D+
Sbjct: 4 STKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTDV 61
Query: 61 CGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVKI 91
VD+L+ NRF+++Y LS N R+RVK
Sbjct: 62 TAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVKC 121
Query: 92 AVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDFP
Sbjct: 122 KLKDAQIILVDSVSDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDFP 181
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
TG+VE+ YD+ + +VVY PVE+
Sbjct: 182 QTGYVEMRYDENLGRVVYEPVEID 205
>gi|254375047|ref|ZP_04990527.1| NADH-quinone oxidoreductase chain C [Francisella novicida
GA99-3548]
gi|151572765|gb|EDN38419.1| NADH-quinone oxidoreductase chain C [Francisella novicida
GA99-3548]
Length = 216
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 34/204 (16%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIIDL 60
K++D D I SG S GE++ + D+ + L+ F + D+
Sbjct: 4 STKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTDV 61
Query: 61 CGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVKI 91
VD+L+ NRF+++Y LS N R+RVK
Sbjct: 62 TAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVKC 121
Query: 92 AVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ + + + S+ ++ A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDFP
Sbjct: 122 KLKDAQIILVDSVSDLWSSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDFP 181
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
TG+VE+ YD+ + +VVY PVE+
Sbjct: 182 QTGYVEMRYDENLGRVVYEPVEID 205
>gi|269926647|ref|YP_003323270.1| NADH (or F420H2) dehydrogenase, subunit C [Thermobaculum terrenum
ATCC BAA-798]
gi|269790307|gb|ACZ42448.1| NADH (or F420H2) dehydrogenase, subunit C [Thermobaculum terrenum
ATCC BAA-798]
Length = 179
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/147 (41%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + G++ GE ++ V L+ + LRD+P F ++D+ VD+L
Sbjct: 22 IINTLQEIIPGAIEEVTVFRGETTIVVPVDRLIDIARTLRDNPAMQFNYLVDVTAVDWLG 81
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
R+ RFDVVYH S N +R+K+ V +G+ VPS+ G++ A+W ERE +DM+GI FEGH
Sbjct: 82 RTPRFDVVYHLYSIPLNHAIRMKVRVDDGQHVPSLTGLWELANWGERETYDMFGIVFEGH 141
Query: 128 PDLRRILTDYGFE-GHPLRKDFPVTGF 153
PDLRRIL ++ G PLRKDFP+ G+
Sbjct: 142 PDLRRILLPEDWQDGFPLRKDFPIGGY 168
>gi|169656769|ref|YP_001429367.2| NADH dehydrogenase I subunit C [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|218534354|sp|A7NEK8|NUOC_FRATF RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|164551837|gb|ABU62411.2| NADH dehydrogenase I subunit C [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 216
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 34/204 (16%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIIDL 60
K++D + I SG S GE++ + D+ + L+ F + D+
Sbjct: 4 STKLQDHFEKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTDV 61
Query: 61 CGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVKI 91
VD+L+ NRF+++Y LS N R+RVK
Sbjct: 62 TAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVKC 121
Query: 92 AVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDFP
Sbjct: 122 KLKDAQIILVDSVSDLWPSANWVEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDFP 181
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
TG+VE+ YD+ + +VVY PVE+
Sbjct: 182 QTGYVEMRYDENLGRVVYEPVEID 205
>gi|285017794|ref|YP_003375505.1| NADH-quinone oxidoreductase chain c (nadh dehydrogenaseI chain c)
(ndh-1, chain c) (nuo3) oxidoreductase [Xanthomonas
albilineans GPE PC73]
gi|283473012|emb|CBA15517.1| probable nadh-quinone oxidoreductase chain c (nadh dehydrogenaseI
chain c) (ndh-1, chain c) (nuo3). oxidoreductase protein
[Xanthomonas albilineans]
Length = 227
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 94/194 (48%), Gaps = 51/194 (26%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS----------------- 69
GE++L+V + C LRD F + DLCGVD+L
Sbjct: 5 RGEVTLEVAADAWHATCLVLRD--EFGFEQLTDLCGVDYLGYGSDEWDTSDVSSHGFSRG 62
Query: 70 ------------------------------NRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
R+ V+ +S ++N+RLRV+
Sbjct: 63 VEGKAVGRFAWGEFPSGEADGGAQPLPVPQQRYAVLAQLMSYRHNQRLRVRCYAPNEDLP 122
Query: 100 --PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
S+ I+PGA+WFERE +D++G+ F GHPDLRRILTDYGF GHP RKDFP+ G VE+
Sbjct: 123 VVASVTDIWPGANWFEREAFDLFGVVFAGHPDLRRILTDYGFVGHPFRKDFPLIGNVEVR 182
Query: 158 YDDKVKKVVYRPVE 171
YD+ ++V+Y PV
Sbjct: 183 YDEAKQRVIYEPVT 196
>gi|312093106|ref|XP_003147569.1| NADH-ubiquinone oxidoreductase 30 kDa subunit [Loa loa]
gi|307757266|gb|EFO16500.1| NADH-ubiquinone oxidoreductase 30 kDa subunit [Loa loa]
Length = 243
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ G Y V+ + G EL L + ++ + +FL+ + F NI+ +
Sbjct: 51 EKLAKFGRYCAECLPKFVQRVQFAAGDELELLIHPTGVLPVIAFLKGNHAAQFTNIVFIT 110
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
G+D SR RF+V+Y LS ++N R+RV+ E + SI I+ GA+W+EREV+DMYG
Sbjct: 111 GMDVPSRKFRFEVIYALLSIRFNARIRVRTYTDEIAPLESITSIFKGANWYEREVYDMYG 170
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
++F HPDLRRILTDYGFEGHP RKDFP+ +
Sbjct: 171 VWFNNHPDLRRILTDYGFEGHPFRKDFPLHIY 202
>gi|148657776|ref|YP_001277981.1| NADH (or F420H2) dehydrogenase subunit C [Roseiflexus sp. RS-1]
gi|218534342|sp|A5UZH8|NUOC_ROSS1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|148569886|gb|ABQ92031.1| NADH (or F420H2) dehydrogenase, subunit C [Roseiflexus sp. RS-1]
Length = 174
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + + + ++ + G+LS+ V +V + FLRDDP F + +L
Sbjct: 1 MALDNATVLERLRAALPDAILGSAEFRGDLSVYVRPERIVDVARFLRDDPELRFNFLENL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDM 119
CGVD+L R RF+VVYH +S R+ +K+ V E + G++PGA++ ERE +DM
Sbjct: 61 CGVDYLGREPRFEVVYHLISFTNRSRICLKVGVDEHNPSVPSLTGLWPGANYHERETFDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKV 165
+GI F GHP L RIL +EGHPLRKD P+ G E+ + ++
Sbjct: 121 FGIIFTGHPCLERILMPEDWEGHPLRKDVPL-GAEEVAFTFNQDRI 165
>gi|332184794|gb|AEE27048.1| NADH-ubiquinone oxidoreductase chain C [Francisella cf. novicida
3523]
Length = 214
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 34/205 (16%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIID 59
M +++D + I SG + E+++ + D+ + L+ F + D
Sbjct: 1 MSLRLQDHFNNITKILSGFGVEVCVAYDEINVIIKDQRDIHLILKKLK--KEYLFEQLTD 58
Query: 60 LCGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVK 90
+ VD+L+ NRF+++Y LS N R+RVK
Sbjct: 59 VTAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTADVNNRFEIIYQLLSMANNVRVRVK 118
Query: 91 IAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ ++ A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDF
Sbjct: 119 CKLKDAQIILVDSVSDLWASANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDF 178
Query: 149 PVTGFVELHYDDKVKKVVYRPVELM 173
P TG+VE+ YD + +VVY PVE+
Sbjct: 179 PQTGYVEMRYDQNLGRVVYEPVEID 203
>gi|56791608|gb|AAW30342.1| NADH dehydrogenase subunit 9 [Amborella trichopoda]
Length = 173
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 69/141 (48%), Positives = 94/141 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 32 FKLLYFLKFHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 91
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
S+V +P A +EREVWDM G+ HPDLRRI TD+GFEGHPLRKD P++G+VE+ +D
Sbjct: 92 SSVVSPFPSAGRWEREVWDMSGVSPINHPDLRRISTDHGFEGHPLRKDLPLSGYVEVRHD 151
Query: 160 DKVKKVVYRPVELMQEHRDYD 180
D K+VV P+E+ QE R +D
Sbjct: 152 DPEKRVVSEPIEMTQEFRYFD 172
>gi|71275688|ref|ZP_00651973.1| NADH dehydrogenase [Xylella fastidiosa Dixon]
gi|71897856|ref|ZP_00680082.1| NADH dehydrogenase (quinone) [Xylella fastidiosa Ann-1]
gi|170729491|ref|YP_001774924.1| NADH dehydrogenase subunit C [Xylella fastidiosa M12]
gi|71163579|gb|EAO13296.1| NADH dehydrogenase [Xylella fastidiosa Dixon]
gi|71732411|gb|EAO34465.1| NADH dehydrogenase (quinone) [Xylella fastidiosa Ann-1]
gi|167964284|gb|ACA11294.1| NADH dehydrogenase [Xylella fastidiosa M12]
Length = 227
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 99/194 (51%), Gaps = 51/194 (26%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD------------- 73
GE++LDV + ++C LRD F + DLCGVD+L N
Sbjct: 5 RGEITLDVPVVEWCAVCKGLRD--EFDFEQLSDLCGVDYLGYGNAEWDTTGVSAQGFSRG 62
Query: 74 ----------------------------------VVYHFLSPKYNRRLRVKIAVAEG--K 97
V+ H +S ++NRRLRV+ +
Sbjct: 63 VAGKAVGRFAWGEFPSAGTNDGTQPWDVPQERFAVLAHLISYRHNRRLRVRCFASNDALP 122
Query: 98 SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
V S+ ++PG +WFERE +D++GI FEGH DLRRILTDYGF GHP RKDFP+TG VE+
Sbjct: 123 IVASLTDVWPGVNWFEREAFDLFGIVFEGHLDLRRILTDYGFIGHPFRKDFPLTGNVEVR 182
Query: 158 YDDKVKKVVYRPVE 171
YD++ K+VVY PV
Sbjct: 183 YDEEKKRVVYVPVT 196
>gi|114777363|ref|ZP_01452360.1| NADH dehydrogenase I, C subunit [Mariprofundus ferrooxydans PV-1]
gi|114552145|gb|EAU54647.1| NADH dehydrogenase I, C subunit [Mariprofundus ferrooxydans PV-1]
Length = 210
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD------F 65
+ F V + S+ + + C +L+ + F ++D+CGVD +
Sbjct: 30 LRKRFGDQVLDVEAGLDCPSVTLARECIAEACHYLKGEHS--FEQVMDICGVDRSDYRGW 87
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ + RF VVY LS N R+R+K+ E V S+ ++P A+WFERE +DMYGI F
Sbjct: 88 PADAPRFQVVYQLLSVSRNCRIRLKVGANERDLVDSVTEVWPTANWFEREAFDMYGIIFN 147
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
HPDLRR+LTDYGFEG+PLRKDFPVTG VE+ +D+ + VYRP +L
Sbjct: 148 HHPDLRRLLTDYGFEGYPLRKDFPVTGRVEMFFDEAQWRCVYRPNKLE 195
>gi|262216820|gb|ACY37790.1| NADH dehydrogenase subunit 9 [Phytophthora inundata]
Length = 116
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 66/110 (60%), Positives = 88/110 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL+VKI + E + V SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKVKITINELQPVDSIINIYKAANWCEREVWDMFGIFFSNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F +PW
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPISLSQQYRLFEFNNPW 110
>gi|254876261|ref|ZP_05248971.1| NADH dehydrogenase I [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254842282|gb|EET20696.1| NADH dehydrogenase I [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 217
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 34/204 (16%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIIDL 60
+++D + + +G + GE+++ + D+ + L+ F + D+
Sbjct: 4 SARLQDHFNNVEKILNGFGVECYVAYGEINISIKDQRDIHLVLKKLK--KEYHFKQLTDI 61
Query: 61 CGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVKI 91
VD+L+ NRF+++Y LS N R+RVK
Sbjct: 62 TAVDYLTYGQSDWQVGKVVSQTGFSRGRQQGFKTADVNNRFEIIYQLLSMANNVRVRVKC 121
Query: 92 AVAEGK--SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ + + V S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDFP
Sbjct: 122 KLKDAQIIMVDSVEDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDFP 181
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
TG+VE+ YD+ + KVVY PVE+
Sbjct: 182 QTGYVEMRYDENLGKVVYEPVEID 205
>gi|62257927|gb|AAX77754.1| unknown protein [synthetic construct]
Length = 251
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 34/204 (16%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCG-DLVSLCSFLRDDPHCCFVNIIDL 60
K++D D I SG S GE++ + D+ + L+ F + D+
Sbjct: 30 STKLQDHFDKITKILSGFGVEGCISYGEITFSIRDQRDIHLILKKLK--KEYLFEQLTDV 87
Query: 61 CGVDFLSRS-----------------------------NRFDVVYHFLSPKYNRRLRVKI 91
VD+L+ NRF+++Y LS N R+RVK
Sbjct: 88 TAVDYLTYGQSDWQVGKVVSQTGFSRGRQQDFKTAAVDNRFEIIYQLLSMANNVRIRVKC 147
Query: 92 AVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ + + + S+ ++P A+W EREV+DM+GI+F HPDLRR+LTDYGF GHPLRKDFP
Sbjct: 148 KLKDAQIILVDSVSDLWPSANWAEREVYDMFGIYFNNHPDLRRVLTDYGFVGHPLRKDFP 207
Query: 150 VTGFVELHYDDKVKKVVYRPVELM 173
TG+VE+ YD+ + +VVY PVE+
Sbjct: 208 QTGYVEMRYDENLGRVVYEPVEID 231
>gi|262216835|gb|ACY37800.1| NADH dehydrogenase subunit 9 [Phytophthora infestans]
Length = 116
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/111 (57%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL++KI + E + + SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKIKITINELQPINSIIKIYRAANWCEREVWDMFGIFFLNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRVFEFNNPWD 111
>gi|262216817|gb|ACY37788.1| NADH dehydrogenase subunit 9 [Phytophthora nicotianae var.
parasitica]
Length = 116
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/111 (57%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL++KI + E + + SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKIKITINELQPIDSIIKIYKAANWCEREVWDMFGIFFLNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRLFEFNNPWD 111
>gi|262216823|gb|ACY37792.1| NADH dehydrogenase subunit 9 [Phytophthora citrophthora]
Length = 116
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 67/111 (60%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL+VKI + E + V SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKVKITINELQPVDSIINIYKAANWCEREVWDMFGIFFINHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y+D K+VVY P+ L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNDLKKRVVYEPINLSQQYRLFEFNNPWD 111
>gi|262216832|gb|ACY37798.1| NADH dehydrogenase subunit 9 [Phytophthora humicola]
Length = 113
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/111 (59%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL+VKI + E + V SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKVKITINELQPVESIINIYKAANWCEREVWDMFGIFFSNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY P+ L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYEPINLSQQYRLFEFNNPWD 111
>gi|328925356|gb|AEB66297.1| NADH dehydrogenase subunit 9 [Silene subconica]
Length = 150
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/150 (48%), Positives = 98/150 (65%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY 76
V+ D + L FL+ + + ++D CGVD+ SR RF+VVY
Sbjct: 1 KKWVKRMXKEKDGXRFDTNTDFAFQLLCFLKLHXYTRYEVLVDXCGVDYPSRKLRFEVVY 60
Query: 77 HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+ LS ++N R+RV+ + E +PS+V ++P A+W EREVWDM+GI F HPDLRRILTD
Sbjct: 61 NLLSTRFNSRIRVQSSADEVSRIPSVVSLFPSANWCEREVWDMFGISFINHPDLRRILTD 120
Query: 137 YGFEGHPLRKDFPVTGFVELHYDDKVKKVV 166
YGFEGHPLRKDFP++G+VE+ YDD K+VV
Sbjct: 121 YGFEGHPLRKDFPLSGYVEVRYDDPEKRVV 150
>gi|95928441|ref|ZP_01311189.1| NADH (or F420H2) dehydrogenase, subunit C [Desulfuromonas
acetoxidans DSM 684]
gi|95135712|gb|EAT17363.1| NADH (or F420H2) dehydrogenase, subunit C [Desulfuromonas
acetoxidans DSM 684]
Length = 159
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 6/154 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + + +F+ SV GE+++ V D+V +C +L+++ F + DL
Sbjct: 1 MSQA---VVAKLKGTFAASVLEVKEHRGEVTVTVKKEDIVDICRYLKEEAGYNF--LCDL 55
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDM 119
CGVD+L ++ RF VVY+ + RLRVK+ V + V ++ GI+ A+W ERE WD+
Sbjct: 56 CGVDYLGQTPRFMVVYNLYNITTKERLRVKVPVEEQDCCVDTVSGIWSTANWPERECWDL 115
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
GI F GHPDLRRIL +EGHPLRKD+P+ G
Sbjct: 116 MGISFAGHPDLRRILMPADWEGHPLRKDYPLQGP 149
>gi|238062213|ref|ZP_04606922.1| NADH dehydrogenase subunit C [Micromonospora sp. ATCC 39149]
gi|237884024|gb|EEP72852.1| NADH dehydrogenase subunit C [Micromonospora sp. ATCC 39149]
Length = 243
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ D + + F ++ V GEL+L V + +C +RDD F + G
Sbjct: 72 DEVRDALEEAYPYFGDAIEKVVVDRGELTLHVRPERIAEVCQVMRDDLALRFELCSSVSG 131
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
VD+L R VVY S Y RR+R++ AV+ +PS+ +YP ADW ERE +DM+
Sbjct: 132 VDYLGADERRLHVVYQLTSMTYRRRVRLETAVSAEAPHLPSVTAVYPTADWQERETYDMF 191
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
GI F+GHP+L RIL +EGHP RKD+P+ G V + Y
Sbjct: 192 GIVFDGHPNLTRILMPDDWEGHPQRKDYPLGG-VPVEY 228
>gi|16263285|ref|NP_436078.1| NuoC2 NADH I chain C [Sinorhizobium meliloti 1021]
gi|307304396|ref|ZP_07584147.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
BL225C]
gi|307318103|ref|ZP_07597539.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
AK83]
gi|7387953|sp|P56896|NUOC2_RHIME RecName: Full=NADH-quinone oxidoreductase subunit C 2; AltName:
Full=NADH dehydrogenase I subunit C 2; AltName:
Full=NDH-1 subunit C 2
gi|5650746|emb|CAB51631.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium
meliloti]
gi|14523962|gb|AAK65490.1| NuoC2 NADH:quinone oxidoreductase (chain C) [Sinorhizobium meliloti
1021]
gi|306896144|gb|EFN26894.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
AK83]
gi|306902598|gb|EFN33192.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium meliloti
BL225C]
Length = 182
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/144 (44%), Positives = 86/144 (59%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I+ SF G+V + G + V +V C FL++ P F + D+CGVD + R
Sbjct: 12 IIGSFGGAVENLGAAHGIYAFAVPPEQIVEFCRFLKEHPALEFDFLSDICGVDHYPETPR 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F+ VYH S K R+R+K + E VP++ G++ A+W ERE WDMYGI FEGHPDLR
Sbjct: 72 FETVYHLYSLKNKWRVRIKCRLGEPPHVPTVTGVWRTANWHEREAWDMYGIRFEGHPDLR 131
Query: 132 RILTDYGFEGHPLRKDFPVTGFVE 155
RI GFEG P RKDFP+ G+ +
Sbjct: 132 RIYMWEGFEGFPQRKDFPLRGYKD 155
>gi|300122807|emb|CBK23822.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/157 (38%), Positives = 101/157 (64%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ I+N ++ ++ S EL+ ++ +++ +FL+ + F + D+C VD+
Sbjct: 15 NYSKSILNMLPNYIQASIYSNRELTFIIEKQYNLTVLNFLKKYTNGQFKTMSDMCAVDYP 74
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ RF+++Y LS +N R+++K + E + SI +Y GA+W+ERE++D +GI+F+
Sbjct: 75 YKKYRFEIIYTLLSLVFNSRVKIKTYLNELDDIESITSLYSGANWWEREIYDFFGIYFKN 134
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ DLRRILTDYGF+GHPLRKDFP+ G+ EL YDD K
Sbjct: 135 NKDLRRILTDYGFKGHPLRKDFPLLGYYELVYDDSEK 171
>gi|296040737|gb|ADG85336.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
Length = 144
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/144 (50%), Positives = 97/144 (67%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
V+ S D + L L FL+ + F +ID+CGVD+ SR RF+VVY+ L
Sbjct: 1 VKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLL 60
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S +YN R+RV+ + E + S+V ++P A W+EREVWDM+G+ F HPDLRRILTDYGF
Sbjct: 61 STRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGF 120
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
EGHPLRKDFP++G+VE+ YDD K
Sbjct: 121 EGHPLRKDFPLSGYVEVRYDDPEK 144
>gi|200004066|ref|YP_002221400.1| NADH dehydrogenase subunit 9 [Blastocystis sp. NandII]
gi|187438964|gb|ACD10935.1| NADH dyhydrogenase subunit 9 [Blastocystis sp. NandII]
gi|198385488|gb|ACH86081.1| NADH dehydrogenase subunit 9 [Blastocystis sp. NandII]
Length = 196
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 110/187 (58%), Gaps = 8/187 (4%)
Query: 1 MVRKI--------EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHC 52
M +++ + I+N ++ ++ S EL+ ++ + +FL+ +
Sbjct: 1 MSKQLYYNTVKLYINYSKSIMNMLPNYIQASIYSNRELTFIINKNYNKLVLNFLKKYTNG 60
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWF 112
+ + D+C +D+ ++ RF+V+Y LS +N R+++K + E S+ SI I+ GA+W+
Sbjct: 61 QYKTMSDMCAIDYPYKTYRFEVIYTLLSLVFNSRVKIKTYLTELDSIESITSIFSGANWW 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
ERE++D +GI+F + DLRRILTDYGF+GHPLRKDFP+ G+ EL YDD K + +E
Sbjct: 121 EREIYDFFGIYFNNNKDLRRILTDYGFKGHPLRKDFPLCGYYELIYDDVNKVIKKTNIEF 180
Query: 173 MQEHRDY 179
+ + Y
Sbjct: 181 SPKFKSY 187
>gi|73989394|ref|XP_853570.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein
3, 30kDa (NADH-coenzyme Q reductase) [Canis familiaris]
Length = 209
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ EL + + ++ + +FLRD F ++ DL
Sbjct: 51 KQLSAFGEYVAEILPKYVQQVQVFCFNELEICIHPDGVIPVLTFLRDHTSAPFQSLADLT 110
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD + N F++VY+ LS ++N + V+ E + V +Y A+W+ RE+WD++G
Sbjct: 111 AVDIPTWQNHFEIVYNLLSLRFNSWICVRTYTDELTPIEFTVSVYKAANWYVREIWDLFG 170
Query: 122 IFFEGHPDLRRILTDYGFEGHPLR 145
+FF HPDLRR LTDYGFEGHP R
Sbjct: 171 VFFANHPDLRRTLTDYGFEGHPFR 194
>gi|190893215|ref|YP_001979757.1| NADH-ubiquinone oxidoreductase, chain C [Rhizobium etli CIAT 652]
gi|218528027|sp|B3PY58|NUOC2_RHIE6 RecName: Full=NADH-quinone oxidoreductase subunit C 2; AltName:
Full=NADH dehydrogenase I subunit C 2; AltName:
Full=NDH-1 subunit C 2
gi|190698494|gb|ACE92579.1| NADH-ubiquinone oxidoreductase protein, chain C [Rhizobium etli
CIAT 652]
Length = 187
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 59/144 (40%), Positives = 81/144 (56%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I+ F ++ + G V +V C FL++ P F + D+CGVD + R
Sbjct: 12 IMERFGDTIEDLGTAHGIDVFAVPPERIVEFCRFLKEHPAMQFNFLSDICGVDHYPETPR 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F+ VYH S R+R+K + + VPS+ G++ A+W ERE WDMYGI F GHPDLR
Sbjct: 72 FEAVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTANWHEREAWDMYGIRFAGHPDLR 131
Query: 132 RILTDYGFEGHPLRKDFPVTGFVE 155
RI GFEG P RKDFP+ G+ +
Sbjct: 132 RIYMWEGFEGFPQRKDFPLRGYKD 155
>gi|11466220|ref|NP_066543.1| NADH dehydrogenase subunit 9 [Naegleria gruberi]
gi|10444255|gb|AAG17821.1|AF288092_46 NADH dehydrogenase subunit 9 [Naegleria gruberi]
Length = 186
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/179 (38%), Positives = 101/179 (56%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+L Y+ + + + L + + + FL D +C F ++ID VD+
Sbjct: 5 NLVSYLFLNIPKLIFSIRKNNNFLFIRSHKLYAIMISYFLYKDMNCQFKSLIDFTCVDYS 64
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
RF+++YH +S Y+ R+ +K + E +S+ S+ IYP W+EREVWD +G+FF
Sbjct: 65 LNKKRFNLIYHIISIYYHFRVFLKFFIEELESMYSLCYIYPNISWYEREVWDFFGVFFLN 124
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
+ +LRRIL DYGF GHPLRKDFP+TGFVEL Y VV + V L Q R Y+ + W
Sbjct: 125 NVNLRRILLDYGFVGHPLRKDFPLTGFVELVYSIFYFSVVQKKVNLSQSFRKYETKTVW 183
>gi|159039973|ref|YP_001539226.1| NADH dehydrogenase subunit C [Salinispora arenicola CNS-205]
gi|218534344|sp|A8M620|NUOC_SALAI RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|157918808|gb|ABW00236.1| NADH (or F420H2) dehydrogenase, subunit C [Salinispora arenicola
CNS-205]
Length = 245
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ D + + F ++ V GEL+L + + +C LRDD F + G
Sbjct: 74 DEVADALEEAYPAFGEAIEKVVVDRGELTLHIRPERIAEVCQVLRDDLALRFELCSSVSG 133
Query: 63 VDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMY 120
VD+L R VY S Y R++R++ AV+ E +PS+ G+YP ADW ERE +DM+
Sbjct: 134 VDYLGADARRLHAVYQLTSMTYRRQIRLEAAVSVEDPHLPSVTGVYPTADWQEREAYDMF 193
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
GI F+GHP L RIL +EGHP RKD+P+ G V + Y
Sbjct: 194 GIVFDGHPGLTRILMPDDWEGHPQRKDYPLGG-VPVEY 230
>gi|262216802|gb|ACY37778.1| NADH dehydrogenase subunit 9 [Phytophthora alni subsp. alni]
gi|262216805|gb|ACY37780.1| NADH dehydrogenase subunit 9 [Phytophthora alni subsp. multiformis]
gi|262216808|gb|ACY37782.1| NADH dehydrogenase subunit 9 [Phytophthora cambivora]
Length = 116
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/111 (59%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL++KI + E +SV SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKIKITINELQSVDSIITIYKAANWCEREVWDMFGIFFFNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP+ GF+E+ Y++ K+VVY P+ L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLRGFLEVFYNELKKRVVYEPINLSQQYRLFEFNNPWD 111
>gi|145596574|ref|YP_001160871.1| NADH dehydrogenase subunit C [Salinispora tropica CNB-440]
gi|226737324|sp|A4XC36|NUOC_SALTO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|145305911|gb|ABP56493.1| NADH (or F420H2) dehydrogenase, subunit C [Salinispora tropica
CNB-440]
Length = 245
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ D + + F ++ V GEL+L + + +C +RDD F + G
Sbjct: 74 DEVADALEEAYPAFGEAIEKVVVDRGELTLHIRPERIAEVCQVMRDDLSLRFELCSSVSG 133
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMY 120
VD+L VVY S Y R++R++ AV+ E +PS+ +YP ADW ERE +DM+
Sbjct: 134 VDYLGADACRLHVVYQLTSMTYRRQVRLEAAVSAENPHLPSVTSVYPTADWQERETYDMF 193
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
G+ F+GHP L RIL +EGHP RKD+P+ G V + Y
Sbjct: 194 GVIFDGHPGLTRILMPDDWEGHPQRKDYPLGG-VPVEY 230
>gi|311744394|ref|ZP_07718196.1| NADH-quinone oxidoreductase subunit C [Aeromicrobium marinum DSM
15272]
gi|311312360|gb|EFQ82275.1| NADH-quinone oxidoreductase subunit C [Aeromicrobium marinum DSM
15272]
Length = 240
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 6 EDLGDYIVNSFS-----GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+++ D + + G+V V GE++ V L+ + + LR+DP F L
Sbjct: 67 DEVADLLEARLTEAGHTGAVEKVVVDRGEITFHVTRQALLEVVTHLRNDPGLRFEFCSSL 126
Query: 61 CGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWD 118
V + VV H LS + RR+RV+ + VPS+V IYP ADW ERE WD
Sbjct: 127 SAVHYPAETGRELHVVLHLLSMTHRRRIRVEATAPDTDPHVPSVVSIYPTADWHEREAWD 186
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
M+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 187 MFGLVFDGHPALTRILMPDDWPGHPQRKDYPLGG 220
>gi|262216847|gb|ACY37808.1| NADH dehydrogenase subunit 9 [Bremia lactucae]
gi|262216850|gb|ACY37810.1| NADH dehydrogenase subunit 9 [Bremia lactucae]
gi|262216853|gb|ACY37812.1| NADH dehydrogenase subunit 9 [Bremia lactucae]
Length = 113
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 65/110 (59%), Positives = 91/110 (82%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL++KI++ E + + SI+GIY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKIKISLNELQPIDSIIGIYKSANWSEREVWDMFGIFFSNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY+P+ L Q++R ++F +PW
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEIFYNELKKRVVYKPINLSQQYRLFEFNNPW 110
>gi|296040735|gb|ADG85335.1| NADH dehydrogenase subunit 9 [Silene paradoxa]
Length = 144
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/132 (53%), Positives = 94/132 (71%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D + L L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+
Sbjct: 13 FDTNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQT 72
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + S+V ++P A W+EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 73 SADEVTRISSVVSLFPSAGWWEREVWDMFGLSFINHPDLRRILTDYGFEGHPLRKDFPLS 132
Query: 152 GFVELHYDDKVK 163
G+VE+ YDD K
Sbjct: 133 GYVEVRYDDPEK 144
>gi|86359328|ref|YP_471220.1| NADH-ubiquinone oxidoreductase chain C protein [Rhizobium etli CFN
42]
gi|86283430|gb|ABC92493.1| NADH-ubiquinone oxidoreductase chain C protein [Rhizobium etli CFN
42]
Length = 187
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 59/142 (41%), Positives = 80/142 (56%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I+ F ++ + G V +V C FL++ P F + D+CGVD + R
Sbjct: 12 IMERFGETIEDLGTAHGIDVFAVPPERIVEFCRFLKEHPALQFDFLSDVCGVDHYPETPR 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F+ VYH S R+R+K + + VPS+ G++ A+W ERE WDMYGI F GHPDLR
Sbjct: 72 FEAVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTANWHEREAWDMYGIRFAGHPDLR 131
Query: 132 RILTDYGFEGHPLRKDFPVTGF 153
RI GFEG P RKDFP+ G+
Sbjct: 132 RIYMWEGFEGFPQRKDFPLRGY 153
>gi|156741307|ref|YP_001431436.1| NADH (or F420H2) dehydrogenase subunit C [Roseiflexus castenholzii
DSM 13941]
gi|218534318|sp|A7NIW0|NUOC_ROSCS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|156232635|gb|ABU57418.1| NADH (or F420H2) dehydrogenase, subunit C [Roseiflexus castenholzii
DSM 13941]
Length = 174
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + + ++ + G+LS+ V +V + FLRDDP + + +L
Sbjct: 1 MALDNPTVLARLQAALPDALLGSSEFRGDLSVHVRPERIVDVARFLRDDPELRYHFLENL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDM 119
CGVD+L R RF+VVYH LS R+ +K+ V+E + ++PGA++ ERE +DM
Sbjct: 61 CGVDYLGREPRFEVVYHLLSFANRHRICLKVGVSERNPSVPSLTELWPGANYHERETFDM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKV 165
+GI F GHP L RIL +EGHPLRKD P+ G E+ + ++
Sbjct: 121 FGIVFTGHPCLDRILMPEDWEGHPLRKDVPL-GAEEVAFTFNQDRI 165
>gi|284034167|ref|YP_003384098.1| NADH (or F420H2) dehydrogenase subunit C [Kribbella flavida DSM
17836]
gi|283813460|gb|ADB35299.1| NADH (or F420H2) dehydrogenase, subunit C [Kribbella flavida DSM
17836]
Length = 235
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 10 DYIVNSFSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-S 67
+ + ++ V GEL+L V LV + LRDD F + GV +
Sbjct: 70 ERLEALVGDGAIEKVVVDRGELTLHVVPERLVEVAQHLRDDEALRFEFCSGVNGVHYPNE 129
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
VYH LS +NRR+R++++V + +PSIV +YP DW ERE WD +GI F+G
Sbjct: 130 TGRELHAVYHLLSITHNRRIRLEVSVPDADPHIPSIVSVYPANDWHERETWDFFGIVFDG 189
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
HP L RI + GHP RKD+P+ G +++ Y
Sbjct: 190 HPALTRIQMPDDWPGHPQRKDYPLGG-IDVEY 220
>gi|271962157|ref|YP_003336353.1| NADH:ubiquinone oxidoreductase 27 kD subunit-like protein
[Streptosporangium roseum DSM 43021]
gi|270505332|gb|ACZ83610.1| NADH:ubiquinone oxidoreductase 27 kD subunit- like protein
[Streptosporangium roseum DSM 43021]
Length = 225
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
++L + +V V GEL+ V L+ + LRDD F + + GV +
Sbjct: 57 DELERALGGDLGDAVERVVVDRGELTFHVKRERLLEVARTLRDDAALRFELSLGVSGVHY 116
Query: 66 LS-RSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIF 123
V H S +NRRLR++++ + +PS V +YP DW ERE WD +GI
Sbjct: 117 PHLEGEELRAVIHLCSITHNRRLRLEVSCPDADPHIPSTVSVYPTHDWHERETWDFFGIV 176
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVELH 157
F+GHP L RI+ ++GHP RKD+P+ G VE
Sbjct: 177 FDGHPALTRIMMPDDWDGHPQRKDYPLGGIPVEYR 211
>gi|91203916|emb|CAJ71569.1| strongly similar to to proton-translocating NADH dehydrogenase I
chain C (NuoC) [Candidatus Kuenenia stuttgartiensis]
Length = 166
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + + F ++ + GEL+ + ++ + F + + + D+CGVD
Sbjct: 4 DSIITLVKSHFPEAITDCYDFRGELTFVIKKEHIMQVAEFFKKNEELECDYLSDVCGVDK 63
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFF 124
+ + F+VVYH S + R+R+K+ V + ++ I+ A+W ERE +DM+GI F
Sbjct: 64 IETNGVFEVVYHLYSMQKKHRVRLKVPVPSDNPTISTVTHIWKTANWHERETYDMFGIQF 123
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+GHPDLR+IL FEGHPLRKD+P+ G
Sbjct: 124 QGHPDLRKILMPEDFEGHPLRKDYPIDG 151
>gi|330465204|ref|YP_004402947.1| NADH dehydrogenase subunit C [Verrucosispora maris AB-18-032]
gi|328808175|gb|AEB42347.1| NADH dehydrogenase subunit C [Verrucosispora maris AB-18-032]
Length = 243
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ D + + F ++ V GEL+L + + +C +RDDP F + G
Sbjct: 72 DEVRDALEEAYPAFGEAIEHVVVDRGELTLHIRPERIAEVCQVMRDDPALRFELCSSVSG 131
Query: 63 VDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
VD+L R VVY S Y RR+R+++AV+ + +PS+ +YP ADW ERE +DM+
Sbjct: 132 VDYLGADARRLHVVYQLTSMTYRRRVRLEVAVSVEEPHLPSVTAVYPTADWQEREAYDMF 191
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
G+ F+GHP L RIL +EGHP RKD+P+ G V + Y
Sbjct: 192 GVIFDGHPALTRILMPDDWEGHPQRKDYPLGG-VPVEY 228
>gi|262216811|gb|ACY37784.1| NADH dehydrogenase subunit 9 [Phytophthora rubi]
Length = 116
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 65/111 (58%), Positives = 89/111 (80%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL++KI + E +SV SI+ IY A+W EREVWDM+GIFF HPDLRRILT
Sbjct: 1 YNLLSIRFNSRLKIKITINELQSVDSIITIYKAANWCEREVWDMFGIFFFNHPDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP+ GF+++ Y++ K+VVY P+ L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLRGFLKVFYNELKKRVVYEPINLSQQYRLFEFNNPWD 111
>gi|296040733|gb|ADG85334.1| NADH dehydrogenase subunit 9 [Silene conica]
Length = 144
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/144 (47%), Positives = 97/144 (67%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
V+ D + + L FL+ + + ++D+CGVD+ SR RF+VVY+ L
Sbjct: 1 VKRMEKEKDGNRFDTNTDFIFQLLCFLKLHSYTRYEVLVDICGVDYPSRKLRFEVVYNLL 60
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S ++N R+R++ + E +PS+V ++P A+W EREVWDM+GI F HPDLRRILTDYGF
Sbjct: 61 STRFNSRIRIQSSADEVSRIPSVVSLFPSANWCEREVWDMFGISFINHPDLRRILTDYGF 120
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
EGHPLRKDFP++G+VE+ YDD K
Sbjct: 121 EGHPLRKDFPLSGYVEVRYDDPEK 144
>gi|296268275|ref|YP_003650907.1| NADH (or F420H2) dehydrogenase subunit C [Thermobispora bispora DSM
43833]
gi|296091062|gb|ADG87014.1| NADH (or F420H2) dehydrogenase, subunit C [Thermobispora bispora
DSM 43833]
Length = 229
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+++ D + ++ V GE++ V LV + LRDDP F + + GV +
Sbjct: 61 DEVADALEALCGDAIERVVVDRGEITFHVRRERLVEVMRHLRDDPRLRFELSLGVSGVHY 120
Query: 66 LSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIF 123
VYH S +NRR+RV+++ + +PS V +YP +W ERE +D +GI
Sbjct: 121 PDDAGAELHAVYHLCSITHNRRIRVEVSCPDSDPHIPSTVSVYPTHNWHERETYDFFGII 180
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVELH 157
F+GHP L RI +EGHP RKD+P+ G VE
Sbjct: 181 FDGHPALTRIEMPDDWEGHPQRKDYPLGGIPVEYR 215
>gi|298246352|ref|ZP_06970158.1| NADH (or F420H2) dehydrogenase, subunit C [Ktedonobacter racemifer
DSM 44963]
gi|297553833|gb|EFH87698.1| NADH (or F420H2) dehydrogenase, subunit C [Ktedonobacter racemifer
DSM 44963]
Length = 212
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + F V V E ++ +D G LV +C FL+ + + + VD+ R+
Sbjct: 10 DVVREKFPQGVLETVEHRDEQTIILDPGSLVEVCQFLK--AQLQYSFLETVTAVDWPERT 67
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS----IVGIYPGADWFEREVWDMYGIFFE 125
RFDVVY LS ++ +R+K+ V + + I ++ GA+W+EREV+D++GI F
Sbjct: 68 PRFDVVYQLLSIEHQCFIRLKVRVGQRREAHPEVPSITSVWAGANWYEREVYDLFGITFA 127
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFV--------ELHYDDKVKKVVYRPVEL-MQEH 176
GHPDLRRI+ + HPLRKD+P++GF ++ Y+ Y L E
Sbjct: 128 GHPDLRRIMMPEDWTTHPLRKDYPISGFELPEPHWGGQVPYNVDPGVGDYYQQSLRSSEG 187
Query: 177 RDYDFLSPWEGVNSLFAKED 196
R ++ EG + ++
Sbjct: 188 RQFN-----EGRAQINPGQE 202
>gi|84494928|ref|ZP_00994047.1| NADH dehydrogenase subunit C [Janibacter sp. HTCC2649]
gi|84384421|gb|EAQ00301.1| NADH dehydrogenase subunit C [Janibacter sp. HTCC2649]
Length = 251
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 59/157 (37%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 6 EDLGDYIVNSFSG--------SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
++L + ++ +V V GEL+L V L ++ LRDDP F
Sbjct: 75 DELTGTLESALGKSGDTAYAKAVERVVVDRGELTLHVAREALPTVARALRDDPALRFEIC 134
Query: 58 IDLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFERE 115
+ GV F VYH LS +NRR+R+++ + + IV YP ADW ERE
Sbjct: 135 TGVSGVHFPNEIGRELHAVYHLLSITHNRRVRLEVTAPDDDARIPSIVETYPAADWHERE 194
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
WDM+GI FEGHP L RIL + GHP RKD+P+ G
Sbjct: 195 TWDMFGIVFEGHPALTRILMPDDWPGHPQRKDYPLGG 231
>gi|269836327|ref|YP_003318555.1| NADH (or F420H2) dehydrogenase, subunit C [Sphaerobacter
thermophilus DSM 20745]
gi|269785590|gb|ACZ37733.1| NADH (or F420H2) dehydrogenase, subunit C [Sphaerobacter
thermophilus DSM 20745]
Length = 202
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 84/147 (57%), Gaps = 3/147 (2%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS--RS 69
+ F + A + E+++ V+ + FLRD P + + D VD L
Sbjct: 36 VREQFPDAYISAYSFRDEMTIRVERPRFRDVIQFLRDHPDLQYTMLSDETAVDMLRLRPD 95
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
RFDV+ S + RLRVK V +G+ VPS+V ++ A W EREV+DM+GI FEGHPD
Sbjct: 96 PRFDVLAQLYSIRRRWRLRVKCGVNDGEVVPSLVPVFAAAGWLEREVYDMFGIVFEGHPD 155
Query: 130 LRRILTDYGFE-GHPLRKDFPVTGFVE 155
LRRIL ++ GHPLRKD+P+ G+ E
Sbjct: 156 LRRILLPEDWDEGHPLRKDYPLRGYRE 182
>gi|150375772|ref|YP_001312368.1| NADH (or F420H2) dehydrogenase subunit C [Sinorhizobium medicae
WSM419]
gi|150030319|gb|ABR62435.1| NADH (or F420H2) dehydrogenase, subunit C [Sinorhizobium medicae
WSM419]
Length = 182
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 63/144 (43%), Positives = 84/144 (58%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I+ SF G+V + G + V +V C FL++ P F + D+CGVD R
Sbjct: 12 IIGSFVGAVEGLGAAHGIHAFAVPPEQIVEFCRFLKEHPALQFSFLSDICGVDHYPDLPR 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F+ VYH S R+R+K + + VPS+ G++ A+W ERE WDMYGI FEGHPDLR
Sbjct: 72 FETVYHLYSLNNKWRVRIKCRLGDPPHVPSVTGVWRTANWHEREAWDMYGIRFEGHPDLR 131
Query: 132 RILTDYGFEGHPLRKDFPVTGFVE 155
RI GFEG P RKDFP+ G+ +
Sbjct: 132 RIYMWEGFEGFPQRKDFPLRGYKD 155
>gi|317123847|ref|YP_004097959.1| NADH dehydrogenase subunit C [Intrasporangium calvum DSM 43043]
gi|315587935|gb|ADU47232.1| NADH dehydrogenase subunit C [Intrasporangium calvum DSM 43043]
Length = 273
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNR 71
SF +V V GE++++V LV++ LRDDP F + GV + R
Sbjct: 111 SASFGEAVAAVVIDRGEMTINVHREHLVAVARALRDDPALRFEICTGVSGVHYPDRVGEE 170
Query: 72 FDVVYHFLSPKY-NRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
VYHFLS + +RR+RV+++ E + +PSIV +YP DW ERE WDM+GI F+GHP
Sbjct: 171 LHAVYHFLSITHGSRRIRVEVSCPEEDRHIPSIVEVYPANDWHERETWDMFGIEFDGHPA 230
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
L R+L + GHP RKD+P+ G + + Y ++
Sbjct: 231 LTRVLMPDDWPGHPQRKDYPLGG-IPVEYKGATVPPPDQRR 270
>gi|331699310|ref|YP_004335549.1| NAD(P)H-quinone oxidoreductase subunit J [Pseudonocardia
dioxanivorans CB1190]
gi|326953999|gb|AEA27696.1| NAD(P)H-quinone oxidoreductase subunit J [Pseudonocardia
dioxanivorans CB1190]
Length = 291
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 58/154 (37%), Positives = 87/154 (56%), Gaps = 7/154 (4%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+DL + + G+++ GE++ + ++ +C LRDDP + + VD
Sbjct: 118 DDLVAALDERGTRGAIQQVTIDRGEITFYIAAERILEVCRTLRDDPSLRYELCSAVSAVD 177
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVA-----EGKSVPSIVGIYPGADWFEREVWD 118
+ R VVYH LS Y RR+R+++A+ E +PS+V +YP ADW ERE WD
Sbjct: 178 YGVDVPQRLHVVYHLLSMTYRRRIRLEVALDWAGGAENPHLPSVVEVYPTADWHERETWD 237
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
M+GI F+GHP L RIL ++GHP RKD+P+ G
Sbjct: 238 MFGIVFDGHPALTRILMPDDWDGHPQRKDYPLGG 271
>gi|283795064|ref|YP_003359480.1| NADH dehydrogenase subunit 9 [Synedra acus]
gi|261279720|gb|ACX62028.1| NADH dehydrogenase subunit 9 [Synedra acus]
Length = 209
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 64/153 (41%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV-DFLSRSNRFDVVYHFLSPKYNRRLR 88
+ + +D L S FL+ C + + DL GV + +DV+Y LS ++N RLR
Sbjct: 46 ICVSLDKTYLRSYLFFLKYHVLCQYDLLTDLTGVSNVSQEDKPYDVIYELLSIRFNNRLR 105
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
VK+ V ++ IY A+W E E+WDMYGI+ E H L R+LTDYGFEGHPLRKDF
Sbjct: 106 VKVQAINNS-VSTVSDIYLSANWSECELWDMYGIYPENHDRLIRLLTDYGFEGHPLRKDF 164
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
P++G+ ++ Y++ K+V+ +EL QE+R +D+
Sbjct: 165 PLSGYYDVRYNEFKKRVIIDKLELGQEYRIFDY 197
>gi|218460105|ref|ZP_03500196.1| NADH-ubiquinone oxidoreductase chain C protein [Rhizobium etli Kim
5]
Length = 178
Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 61/142 (42%), Positives = 81/142 (57%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I+ F ++ + G + V +V C FL++ P F + D+CGVD R
Sbjct: 12 IMERFGETIEDLGTAHGIEAFAVPPERIVEFCRFLKEHPALQFNFLSDVCGVDHYPEMPR 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F+ VYH S RR+R+K + + VPS+ G++ A+W ERE WDMYGI F GHPDLR
Sbjct: 72 FEAVYHLYSLPNRRRVRIKCRLGDPPEVPSVTGVWRTANWHEREAWDMYGIRFTGHPDLR 131
Query: 132 RILTDYGFEGHPLRKDFPVTGF 153
RI GFEG P RKDFP+ GF
Sbjct: 132 RIYMWEGFEGFPQRKDFPLRGF 153
>gi|221633755|ref|YP_002522981.1| NADH-quinone oxidoreductase subunit C [Thermomicrobium roseum DSM
5159]
gi|221156590|gb|ACM05717.1| nadh-quinone oxidoreductase chain c [Thermomicrobium roseum DSM
5159]
Length = 204
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 11 YIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD--FLSR 68
+ F + A E+++ V L + FLR P + ++ D+ VD +L
Sbjct: 35 LVRERFPDAFEEATVFRDEMTIRVARPALRDVVDFLRLHPELRYNHLTDITAVDLLYLRE 94
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
RFDVV H S +RLRVK V +G+ VPS+V I+ GA+W ERE +DM+GI FEGHP
Sbjct: 95 RPRFDVVVHLYSIPRRQRLRVKCGVDDGEMVPSLVPIFAGANWLERECYDMFGIVFEGHP 154
Query: 129 DLRRILTDYGFE-GHPLRKDFPVTGF 153
DLRRIL ++ GHPLRKD+P+ G+
Sbjct: 155 DLRRILLPEDWDEGHPLRKDYPLRGY 180
>gi|262216844|gb|ACY37806.1| NADH dehydrogenase subunit 9 [Plasmopara halstedii]
Length = 114
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/111 (56%), Positives = 87/111 (78%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL++KI + E + V SI+ IY A+W EREVWDM+GIFF H DLRRILT
Sbjct: 1 YNLLSIRFNSRLKIKIKINELQPVNSIIEIYKSANWCEREVWDMFGIFFSNHSDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY + L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYESINLSQQYRLFEFNNPWD 111
>gi|315501188|ref|YP_004080075.1| NADH (or f420h2) dehydrogenase, subunit c [Micromonospora sp. L5]
gi|315407807|gb|ADU05924.1| NADH (or F420H2) dehydrogenase, subunit C [Micromonospora sp. L5]
Length = 243
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ D + + F ++ V GEL+L V + +C +RDD F + + G
Sbjct: 72 DEVRDALEEAYPDFGDAIEKVVVDRGELTLHVRPERIAEVCQVMRDDLALRFELLSSVSG 131
Query: 63 VDFLS-RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
VD+L + R VVYH S Y R +R+++AV+ + VPS+ +YP ADW ERE +DM+
Sbjct: 132 VDYLGAQERRLHVVYHLTSMTYRRSVRLEVAVSVEEPHVPSVTAVYPTADWQERETYDMF 191
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
G+ F+GHP L RIL +EGHP RKD+P+ G V + Y
Sbjct: 192 GVVFDGHPALTRILMPDDWEGHPQRKDYPLGG-VPVEY 228
>gi|262216838|gb|ACY37802.1| NADH dehydrogenase subunit 9 [Plasmopara halstedii]
gi|262216841|gb|ACY37804.1| NADH dehydrogenase subunit 9 [Plasmopara halstedii]
Length = 113
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/111 (56%), Positives = 87/111 (78%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y+ LS ++N RL++KI + E + V SI+ IY A+W EREVWDM+GIFF H DLRRILT
Sbjct: 1 YNLLSIRFNSRLKIKIKINELQPVNSIIEIYKSANWCEREVWDMFGIFFSNHSDLRRILT 60
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWE 186
DYGFEGHPLRKDFP++GF+E+ Y++ K+VVY + L Q++R ++F +PW+
Sbjct: 61 DYGFEGHPLRKDFPLSGFLEVFYNELKKRVVYESINLSQQYRLFEFNNPWD 111
>gi|328925352|gb|AEB66295.1| NADH dehydrogenase subunit 9 [Silene multinervia]
gi|328925354|gb|AEB66296.1| NADH dehydrogenase subunit 9 [Silene multinervia]
Length = 150
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/127 (53%), Positives = 91/127 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 24 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 83
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 84 SPVVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYD 143
Query: 160 DKVKKVV 166
D K+VV
Sbjct: 144 DPEKRVV 150
>gi|111220501|ref|YP_711295.1| NADH dehydrogenase subunit C [Frankia alni ACN14a]
gi|111148033|emb|CAJ59699.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
(NDH-1, chain C) [Frankia alni ACN14a]
Length = 250
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR--SNRF 72
+V AV GEL+L V L +L LRDDP F + L GVD+ R
Sbjct: 90 QLGDAVERAVVDRGELTLHVRREGLPALAQTLRDDPGLRFELLSSLSGVDYPDDVTGRRL 149
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H S + RRLR++++VA+ + ++P ADW ERE +D++GI + GHP L
Sbjct: 150 HSVVHLTSMTHRRRLRLEVSVADADPTLPSLTSVWPTADWHEREAYDLFGIIYTGHPGLT 209
Query: 132 RILTDYGFEGHPLRKDFPVTG 152
RI+ + GHP RKD+P+ G
Sbjct: 210 RIMMPDDWIGHPQRKDYPLGG 230
>gi|302864903|ref|YP_003833540.1| NADH (or F420H2) dehydrogenase subunit C [Micromonospora aurantiaca
ATCC 27029]
gi|302567762|gb|ADL43964.1| NADH (or F420H2) dehydrogenase, subunit C [Micromonospora
aurantiaca ATCC 27029]
Length = 243
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 61/158 (38%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ D + + F ++ V GEL+L V + +C +RDD F + G
Sbjct: 72 DEVRDALEEAYPDFGDAIEKVVVDRGELTLHVRPERIAEVCQVMRDDLALRFELCSSVSG 131
Query: 63 VDFLS-RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
VD+L + R VVYH S Y R +R+++AV+ + VPS+ +YP ADW ERE +DM+
Sbjct: 132 VDYLGAQERRLHVVYHLTSMTYRRSVRLEVAVSVEEPHVPSVTAVYPTADWQERETYDMF 191
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
G+ F+GHP L RIL +EGHP RKD+P+ G V + Y
Sbjct: 192 GVVFDGHPALTRILMPDDWEGHPQRKDYPLGG-VPVEY 228
>gi|327398401|ref|YP_004339270.1| NAD(P)H-quinone oxidoreductase subunit J [Hippea maritima DSM
10411]
gi|327181030|gb|AEA33211.1| NAD(P)H-quinone oxidoreductase subunit J [Hippea maritima DSM
10411]
Length = 176
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M E+L + I + F + ELS+ + L FL DD F ++ +
Sbjct: 1 MTN--EELFEKIQSKFGEYIVEHDTFRNELSVTIKKEKLHEFMQFLHDDSELKFDYLVMM 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VDF R RFD+VY S + +RVK E ++V S+ I+ A+W ERE +DM+
Sbjct: 59 TAVDFPKREERFDLVYELRSIPHKMIMRVKTRTKEDEAVDSVCDIWHSANWDERETYDMF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
GI F HPDLRRIL +EG+PLRKD+P+ G E
Sbjct: 119 GIKFNNHPDLRRILMPEDWEGYPLRKDYPLKGKPE 153
>gi|332296566|ref|YP_004438489.1| NAD(P)H-quinone oxidoreductase subunit J [Thermodesulfobium
narugense DSM 14796]
gi|332179669|gb|AEE15358.1| NAD(P)H-quinone oxidoreductase subunit J [Thermodesulfobium
narugense DSM 14796]
Length = 178
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+E++ + + F + + G+LS+ V D + FL++ + F ++ DLCGV
Sbjct: 2 TVEEILKVVKDEFKERILSEEINFGQLSISVPKDDNTEVILFLKEHENLKFDHLADLCGV 61
Query: 64 DFLSRSN-RFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYG 121
D+ + R++VVY+ S K+ R+RVKI V E V S+ I+ GA+W E E +DM+G
Sbjct: 62 DYYKLRDVRYEVVYNLYSIKFKHRIRVKIQVPEDDMEVNSLTCIFKGANWHECECYDMFG 121
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
I F GHP+LRR+ + GHPLRKD+P+ G
Sbjct: 122 IKFRGHPNLRRVFMPDNWVGHPLRKDYPLKG 152
>gi|148266252|ref|YP_001232958.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter uraniireducens
Rf4]
gi|218534289|sp|A5G9B7|NUOC_GEOUR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|146399752|gb|ABQ28385.1| NADH dehydrogenase subunit C [Geobacter uraniireducens Rf4]
Length = 164
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + F+ S+ GE+++ V D+V+LC FL+ + + D+
Sbjct: 4 MAENNRAVIK-LREKFASSILEVKEFRGEVTVIVRKEDIVALCKFLK--EELRYNLLTDV 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDM 119
VD+L + RF VVY+ S RLR+K V EG ++ ++ G++ A+W ERE +D+
Sbjct: 61 TAVDYLGKDPRFMVVYNIYSIPNKDRLRIKAPVTEGECTIDTVCGVWTTANWLEREAYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
GI F+ HPDLRRI+ + GHPLRKD+P+ G Y
Sbjct: 121 MGIIFKNHPDLRRIMMTDDWVGHPLRKDYPLQGPDREPY 159
>gi|222053572|ref|YP_002535934.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter sp. FRC-32]
gi|221562861|gb|ACM18833.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter sp. FRC-32]
Length = 164
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + F+ S+ GE+++ V D+VS+CSFL++ + + D+
Sbjct: 4 MAENNRAVIK-LKEKFASSIIDIKEFRGEVTVTVKKEDIVSICSFLKEQQ--RYNLLTDI 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDM 119
VD+L RF VVY+ S R+R+K V ++ ++ G++ A+W EREV+D+
Sbjct: 61 TAVDYLGSDPRFMVVYNLYSIPNKDRIRIKAPVSDSDCTIDTVYGVWKTANWLEREVYDL 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
GI F HPDLRRIL + GHPLRKD+P+ G Y
Sbjct: 121 MGILFNNHPDLRRILMTDDWVGHPLRKDYPLQGPDREPY 159
>gi|256380663|ref|YP_003104323.1| NADH dehydrogenase subunit C [Actinosynnema mirum DSM 43827]
gi|255924966|gb|ACU40477.1| NADH (or F420H2) dehydrogenase, subunit C [Actinosynnema mirum DSM
43827]
Length = 252
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 6 EDLGDYIVNSFS------GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
++L D ++ + +++ GE++ + LV + LRDDP F
Sbjct: 78 DELVDELLAAMGEQGLPADAIQQITVDRGEITFFLRREHLVDVARLLRDDPALRFELCSS 137
Query: 60 LCGVDF-LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVW 117
L GVD+ R V H S Y RR+R+++AV VPS+V +YP DW ERE W
Sbjct: 138 LSGVDYGPEAPQRLHSVVHLTSMTYRRRIRLEVAVDVDDAHVPSLVSVYPTTDWQEREAW 197
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
DM+GI ++GHP L RIL ++GHP RKD+P+ G + + Y ++
Sbjct: 198 DMFGIVYDGHPGLTRILMPDDWDGHPQRKDYPLGG-IPVEYKGAEIPPPDQRR 249
>gi|320160241|ref|YP_004173465.1| NADH-quinone oxidoreductase subunit C [Anaerolinea thermophila
UNI-1]
gi|319994094|dbj|BAJ62865.1| NADH-quinone oxidoreductase chain C [Anaerolinea thermophila UNI-1]
Length = 170
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 12/170 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ + + + + F+ GE++L V +V++ LRD+ F ++D+
Sbjct: 1 MDEKMRTVVEGLQSRFN---LEVQEFRGEVTLIVPPEQIVAVAQTLRDEH--GFEQLVDV 55
Query: 61 CGVDF-LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWD 118
VD+ + RF VVYH S + +++ + S V +YPGA+W+EREV+D
Sbjct: 56 TAVDYFPQQEPRFHVVYHIRSLAQTLIICLRVPLNGNFPSVSTVEKVYPGANWYEREVYD 115
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY----DDKVKK 164
M+GI FEGH DLRRIL Y ++GHPLRKD+P+ G+ E+ + D+ +K+
Sbjct: 116 MFGITFEGHSDLRRILMPYDWQGHPLRKDYPL-GYEEVQFSFNIDEVLKR 164
>gi|116749375|ref|YP_846062.1| trifunctional NADH dehydrogenase I subunit B/C/D [Syntrophobacter
fumaroxidans MPOB]
gi|218534237|sp|A0LJM5|NUBCD_SYNFM RecName: Full=NADH-quinone oxidoreductase subunit B/C/D; AltName:
Full=NADH dehydrogenase I subunit B/C/D; AltName:
Full=NDH-1 subunit B/C/D
gi|116698439|gb|ABK17627.1| NADH dehydrogenase I, D subunit [Syntrophobacter fumaroxidans MPOB]
Length = 787
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++L + F +VR + + V+ L + FL+ + F+ + DL
Sbjct: 217 SEREKELARVLSERFGDAVREEPFTSDMPTFHVETNRLKDVLGFLKKEASPRFLRLDDLT 276
Query: 62 GVD-----FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFERE 115
VD S + +VYH LS + R+R+K + + I I+P A+W+ERE
Sbjct: 277 AVDESARRDRSAYPDWTMVYHLLSFEPAGRVRLKTGLHGRQPALPSITDIWPSANWYERE 336
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKV 165
V+D++GI FEGHP+LRRI+ + +EGHPLRKD+P Y +V
Sbjct: 337 VYDLFGIRFEGHPNLRRIMMPHDWEGHPLRKDYPGRATQMAPYTLGDARV 386
>gi|88606841|ref|YP_505106.1| NADH dehydrogenase I, C subunit, truncation [Anaplasma
phagocytophilum HZ]
gi|88597904|gb|ABD43374.1| NADH dehydrogenase I, C subunit, truncated [Anaplasma
phagocytophilum HZ]
Length = 91
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/91 (57%), Positives = 68/91 (74%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+PS+ ++ A WFEREV+DMYGI F HPDLRRILTDYGF GHP+ KDFP+TG+ E+ Y
Sbjct: 1 MPSVTSVFGSAGWFEREVYDMYGIEFSDHPDLRRILTDYGFRGHPMLKDFPLTGYEEIRY 60
Query: 159 DDKVKKVVYRPVELMQEHRDYDFLSPWEGVN 189
D + KV Y+PV+L Q R ++ +SPW+G
Sbjct: 61 DFRKGKVAYQPVDLQQNFRLFNSMSPWKGYK 91
>gi|296130549|ref|YP_003637799.1| NADH (or F420H2) dehydrogenase, subunit C [Cellulomonas flavigena
DSM 20109]
gi|296022364|gb|ADG75600.1| NADH (or F420H2) dehydrogenase, subunit C [Cellulomonas flavigena
DSM 20109]
Length = 309
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNRFDV 74
F+ +V V GEL+L+V LV + LRDDP F + + GV F
Sbjct: 151 FANAVESVVVDRGELTLNVAREHLVEVVQQLRDDPDLRFELSLGVSGVHFPHDAGRELHA 210
Query: 75 VYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
VY +S + RRLR+++AV EG VPS +YP DW ERE WD +GI F+GHP L RI
Sbjct: 211 VYQIVSVTHGRRLRLEVAVPEGDPHVPSTTAVYPANDWHERETWDFFGIVFDGHPGLARI 270
Query: 134 LTDYGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
+ GHP RKD+P+ G + + Y ++
Sbjct: 271 QMPDDWPGHPQRKDYPLGG-IPVEYKGATIPPPDQRR 306
>gi|197120285|ref|YP_002140712.1| NADH dehydrogenase I subunit C [Geobacter bemidjiensis Bem]
gi|218534274|sp|B5EFG1|NUOC_GEOBB RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|197089645|gb|ACH40916.1| NADH dehydrogenase I, C subunit [Geobacter bemidjiensis Bem]
Length = 161
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + F+ ++ GE+++ V +++ + LRDD + + D+
Sbjct: 1 MAENNRAVVK-LKERFANALLDCTEYRGEVTVTVKKENILEVLKCLRDD--LRYNFLTDV 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDM 119
VD+L + RF VVYH +S R+RVK + E S+ S ++ ADW ERE +DM
Sbjct: 58 TAVDYLGQDPRFMVVYHLMSIPNKDRIRVKAPLTEADCSIDSATALWNSADWVEREAYDM 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+GI F+ HP+L RIL + GHPLRKD+P+ G Y
Sbjct: 118 FGIDFKNHPNLVRILMTDDWVGHPLRKDYPLQGPDREPY 156
>gi|288917185|ref|ZP_06411554.1| NADH (or F420H2) dehydrogenase, subunit C [Frankia sp. EUN1f]
gi|288351376|gb|EFC85584.1| NADH (or F420H2) dehydrogenase, subunit C [Frankia sp. EUN1f]
Length = 229
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR--SNRF 72
+V V + GEL++ V L+ + LRDDP F + L GVD+ R
Sbjct: 69 ELGDAVERVVFAYGELTIHVRRERLLDVAWTLRDDPGLRFELLSSLSGVDYPDDLTGRRL 128
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H S + RRLRV+++VA+G +PS+ ++P ADW ERE +D++G+ +EGHP L
Sbjct: 129 HSVVHLTSMTHRRRLRVEVSVADGDPHLPSLTPVWPTADWHEREAYDLFGLVYEGHPGLA 188
Query: 132 RILTDYGFEGHPLRKDFPVTG 152
RI+ + GHP RKD+P+ G
Sbjct: 189 RIMMPDDWVGHPQRKDYPLGG 209
>gi|253702593|ref|YP_003023782.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter sp. M21]
gi|251777443|gb|ACT20024.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter sp. M21]
Length = 161
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + F+ ++ GE+++ V +++ + LRDD + + D+
Sbjct: 1 MAENNRAVVK-LKERFANALLDCTEYRGEVTVTVKKENILEVLKCLRDD--LRYNFLTDV 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA-VAEGKSVPSIVGIYPGADWFEREVWDM 119
VD+L + RF VVYH +S R+RVK S+ S ++ ADW ERE +DM
Sbjct: 58 TAVDYLGQDPRFMVVYHLMSIPNKDRIRVKAPLTESDCSIDSATALWNSADWVEREAYDM 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+GI F+ HP+L RIL + GHPLRKD+P+ G Y
Sbjct: 118 FGIEFKNHPNLVRILMTDDWVGHPLRKDYPLQGPDREPY 156
>gi|328925350|gb|AEB66294.1| NADH dehydrogenase subunit 9 [Silene lydia]
Length = 136
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 94/128 (73%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
++ D + L FL+ + + ++D+CGVD+ SR RF+VVY+ LS ++N R+RV+
Sbjct: 9 IETDMDFVFQLLCFLKLHTYTRYEVLVDICGVDYPSRRLRFEVVYNLLSTRFNSRIRVQS 68
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E VPS+V ++P A+W EREVWDM+GI F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 69 SADEVSRVPSVVSLFPSANWCEREVWDMFGISFINHPDLRRILTDYGFEGHPLRKDFPLS 128
Query: 152 GFVELHYD 159
G+VE+ YD
Sbjct: 129 GYVEVRYD 136
>gi|218513797|ref|ZP_03510637.1| NADH-ubiquinone oxidoreductase protein, chain C [Rhizobium etli
8C-3]
Length = 177
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 57/142 (40%), Positives = 78/142 (54%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
F ++ + G V +V C FL++ P F + D+CGVD + RF+
Sbjct: 2 ERFGDTIEDLGTAHGIDVFAVPPERIVEFCRFLKEHPAMQFNFLSDICGVDHYPETLRFE 61
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
VYH S R+R+K + + VPS+ G++ A+W ERE WDMYGI F HPDLRRI
Sbjct: 62 AVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTANWHEREAWDMYGIRFAEHPDLRRI 121
Query: 134 LTDYGFEGHPLRKDFPVTGFVE 155
GFEG P RKDFP+ G+ +
Sbjct: 122 YMWEGFEGFPQRKDFPLRGYKD 143
>gi|269128611|ref|YP_003301981.1| NADH (or F420H2) dehydrogenase subunit C [Thermomonospora curvata
DSM 43183]
gi|268313569|gb|ACY99943.1| NADH (or F420H2) dehydrogenase, subunit C [Thermomonospora curvata
DSM 43183]
Length = 248
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNSFSG---SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+++ D + +F +V V GE++ V L + LRDDP F + G
Sbjct: 77 DEVADALERAFPDFGEAVERVVVDRGEITFVVRRQYLPQVAQTLRDDPALRFELCTGVSG 136
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + VYHFLS +NRR+R+++ + +PSIV IYP DW ERE +D +
Sbjct: 137 VHYPSDTGAELHAVYHFLSMTHNRRIRIEVTCPDADPHIPSIVSIYPTNDWHERETYDFF 196
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVELH 157
GI F+GHP L RI + GHP RKD+P+ G VE
Sbjct: 197 GIIFDGHPALTRIEMPDDWVGHPQRKDYPLGGIPVEYR 234
>gi|200004038|ref|YP_002221373.1| NADH dehydrogenase subunit 9 [Blastocystis sp. DMP/02-328]
gi|198385462|gb|ACH86056.1| NADH dehydrogenase subunit 9 [Blastocystis sp. DMP/02-328]
Length = 196
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/170 (35%), Positives = 102/170 (60%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ I+N ++ ++ + EL+ ++ + +FL+ + + + D+C +D+
Sbjct: 15 NFSKSILNMLPNYIQASIYTNRELTFIINKNYNTLVINFLKKYTNSQYQTMADMCAIDYP 74
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ RF++VY LS YN R+++K + E S+ +I ++ GA+W+ERE++D +GI+F
Sbjct: 75 MKQFRFEIVYTLLSLVYNSRIKIKTYLKELDSIETITTLFKGANWWEREIYDFFGIYFTH 134
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
+ DLRRILTDYGF GHPL KDFP+ GF E+ YDD K + P+E +
Sbjct: 135 NTDLRRILTDYGFIGHPLSKDFPLMGFYEVTYDDITKCIKKTPIEYSPKF 184
>gi|322421848|ref|YP_004201071.1| NADH (or F420H2) dehydrogenase subunit C [Geobacter sp. M18]
gi|320128235|gb|ADW15795.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter sp. M18]
Length = 161
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + F+ ++ GE+++ V ++ + LRDD + + DL
Sbjct: 1 MAENNRAVVK-LKERFADALLEYKEHRGEVTVTVKKESILEVLKCLRDD--LRYNFLSDL 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDM 119
VD+L + RF VVYH LS R+RVK V E S+ S ++ A+W ERE +D+
Sbjct: 58 TAVDYLGQEPRFMVVYHLLSIPNKDRVRVKAPVTEADCSIDSATALWNTANWLEREAFDL 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+GI F+ HP+L RIL + GHPLRKD+P+ G Y
Sbjct: 118 FGIEFKNHPNLVRILMTDDWVGHPLRKDYPLQGPDREPY 156
>gi|206891078|ref|YP_002248749.1| NADH-quinone oxidoreductase chain c [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206743016|gb|ACI22073.1| NADH-quinone oxidoreductase chain c [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 177
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
++ I + FS V + + E S+ V + + S L++ P F +IDL VD+L
Sbjct: 5 EIIKRIRDKFSDEVLWFICFRDECSIVVKKEKIKDILSHLKNTPELEFDYLIDLTAVDYL 64
Query: 67 SR-SNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
RFDVVYH +S K+ R+R+K V +G + S+ ++ A+WFERE +DM+GI F
Sbjct: 65 GFREPRFDVVYHLMSIKHKHRIRIKAQVPEQGCCIDSVADLWATANWFERECYDMFGIEF 124
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVT 151
GHPDLRRIL + G PLRKD+PV
Sbjct: 125 TGHPDLRRILMPEDWNGFPLRKDYPVK 151
>gi|78224543|ref|YP_386290.1| NADH (or F420H2) dehydrogenase subunit C [Geobacter metallireducens
GS-15]
gi|123570772|sp|Q39QA9|NUOC_GEOMG RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|78195798|gb|ABB33565.1| NADH dehydrogenase subunit C [Geobacter metallireducens GS-15]
Length = 162
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 57/155 (36%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + FS SV GE+++ V D+V +C+FL+ + D+
Sbjct: 1 MAETNRAVIK-LREKFSASVLDVKEFRGEVTVTVKREDIVEICNFLK--SSLAYNLCTDV 57
Query: 61 CGVDFLS-RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVWD 118
VD+L + RF VVY+ S RLRVK V E V A +W EREV+D
Sbjct: 58 TAVDYLGKQEPRFMVVYNLYSIPNKDRLRVKAGVPEAGCSIDTVSCVWSAANWLEREVYD 117
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
+ G+ F HPDLRRIL + GHPLRKD+P+ G
Sbjct: 118 LMGVVFNNHPDLRRILMTDDWVGHPLRKDYPLQGP 152
>gi|332669451|ref|YP_004452459.1| NADH (or F420H2) dehydrogenase, subunit C [Cellulomonas fimi ATCC
484]
gi|332338489|gb|AEE45072.1| NADH (or F420H2) dehydrogenase, subunit C [Cellulomonas fimi ATCC
484]
Length = 265
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 12/168 (7%)
Query: 8 LGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + + + F+ +V V EL+L V +V++ S LRDDP F + + GV
Sbjct: 96 LAEVLDENGTGFANAVESVVVDREELTLHVAREHVVAVASALRDDPDLRFELSLGVSGVH 155
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGI 122
+ + VYH +S + RRLR ++A+ + VPS V +YP DW ERE +D +GI
Sbjct: 156 YPHEQGRELHAVYHVVSVTHGRRLRFEVAIPDADPHVPSTVSVYPANDWHERETYDFFGI 215
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
F+GHP L RI + GHP RKD+P+ G + + Y ++
Sbjct: 216 VFDGHPGLARIEMPDDWPGHPQRKDYPLGG-IPVEYKGATVPPPDQRR 262
>gi|300771675|ref|ZP_07081550.1| NADH-quinone oxidoreductase subunit C [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761664|gb|EFK58485.1| NADH-quinone oxidoreductase subunit C [Sphingobacterium
spiritivorum ATCC 33861]
Length = 167
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 2 VRKIEDLG--DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+ K+ ++ + + F V+ A S G L+++ D++ + +F++DD F+ + D
Sbjct: 1 MDKLTNIQLWERLQEHFGAKVKNASESYGLLTIETSKADIIDVLAFIKDDTILQFIYLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
+ V + ++ F VVYH S +N R+R+K+ + ++ GA+W ERE +D
Sbjct: 61 ITAVHYPNQEEAFAVVYHVHSLVHNVRIRIKVFIDGQHPAIPSATVLWNGANWMERETYD 120
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+GI FEGHPDLRRIL P+RK++P+ +
Sbjct: 121 FFGIQFEGHPDLRRILNVDEMTVFPMRKEYPLEDPNRV 158
>gi|171187537|gb|ACB41372.1| NADH dehydrogenase subunit C [Mimulus guttatus]
Length = 153
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 87/130 (66%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 24 FQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRI 83
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A +EREVWDM+G+ HPDLRRI TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 84 SPVVSPFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYD 143
Query: 160 DKVKKVVYRP 169
D K+VV P
Sbjct: 144 DPEKRVVSEP 153
>gi|66219964|gb|AAY42997.1| Nqo5 [Rhodothermus marinus]
Length = 230
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 3/147 (2%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
++ + + F + GE ++ V +V +C FL+++ F + DL G+D
Sbjct: 40 EVVEALKERFGDVIEEVELYAGEHTVRVRADKIVEVCRFLKEEQ--GFNYLADLGGIDRF 97
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
+ RF+V Y+ +S + +R+R+K+ V E V + +Y A+W ERE +DM+GI FE
Sbjct: 98 TDEGRFEVFYNLVSIERRKRIRLKVRVEEDNPVVPSVTSVYRAANWNERECYDMFGIRFE 157
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTG 152
GHPDLRR+ FE HPLRK+FP+ G
Sbjct: 158 GHPDLRRMYMPEDFEYHPLRKEFPLLG 184
>gi|256396790|ref|YP_003118354.1| NADH dehydrogenase subunit C [Catenulispora acidiphila DSM 44928]
gi|256363016|gb|ACU76513.1| NADH (or F420H2) dehydrogenase, subunit C [Catenulispora acidiphila
DSM 44928]
Length = 235
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 6 EDLGDYIVNS-FS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++L + ++ V G+L++ V LV + LRDDP F + + GV
Sbjct: 65 DELEGALEEQGLPLEAISAYVVYRGQLTIHVPREHLVRVAKTLRDDPALRFEMCLGVTGV 124
Query: 64 DFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYG 121
F + V LS +NRR+R++ + +PS+ +YP DW ERE +DM+G
Sbjct: 125 HFPEQSGRELHSVVPLLSITHNRRIRLETTAPDVDPHIPSLYEVYPTVDWHERESYDMFG 184
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
I ++GHP L RIL + GHP RKD+P+ G
Sbjct: 185 IIYDGHPGLTRILMPDDWLGHPQRKDYPLGG 215
>gi|268317702|ref|YP_003291421.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodothermus marinus DSM
4252]
gi|262335236|gb|ACY49033.1| NADH (or F420H2) dehydrogenase, subunit C [Rhodothermus marinus DSM
4252]
Length = 230
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 3/147 (2%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
++ + + F + GE ++ V +V +C FL+++ F + DL G+D
Sbjct: 40 EVVEALKERFGDVIEEVELYAGEHTVRVRADKIVEVCRFLKEEQ--GFNYLADLGGIDRF 97
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
+ RF+V Y+ +S + +R+R+K+ V E V + +Y A+W ERE +DM+GI FE
Sbjct: 98 TDEGRFEVFYNLVSIERRKRIRLKVRVEEDNPVVPSVTSVYRAANWNERECYDMFGICFE 157
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTG 152
GHPDLRR+ FE HPLRK+FP+ G
Sbjct: 158 GHPDLRRMYMPEDFEYHPLRKEFPLLG 184
>gi|149909803|ref|ZP_01898454.1| NuoC2 NADH I CHAIN C [Moritella sp. PE36]
gi|149807135|gb|EDM67091.1| NuoC2 NADH I CHAIN C [Moritella sp. PE36]
Length = 180
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+++SF+G + N + + V DLV LC FLRDD F + D+ G+DF + R
Sbjct: 12 LIDSFNGRISIDPNVIDMPCVVVSPKDLVELCLFLRDDDAFKFNFMADIGGIDFHPNTPR 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ +VYH S RLR+K + + P+I ++ A+W ERE +DM+GI FEGHPDLR
Sbjct: 72 YQLVYHLYSISLGWRLRIKCPLKDPPKAPTITHLWTTANWHEREAYDMFGIVFEGHPDLR 131
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDD 160
RI FEG P+RKDFP+ G+ + Y+
Sbjct: 132 RIYMWQEFEGWPMRKDFPLRGYKD-KYNP 159
>gi|302523879|ref|ZP_07276221.1| NADH-quinone oxidoreductase subunit C [Streptomyces sp. AA4]
gi|302432774|gb|EFL04590.1| NADH-quinone oxidoreductase subunit C [Streptomyces sp. AA4]
Length = 253
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDVV 75
++ GE++ V LV + LR+DP F ++ + GVD+ R V
Sbjct: 96 PSAILQTTVDRGEITFYVSREHLVDIAKVLRNDPGLRFEMLMAVTGVDYGVDVPQRMHAV 155
Query: 76 YHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
Y FLS Y RR+R++I + VPS+V +Y ADW ERE +DM+GI F+GHP L RI
Sbjct: 156 YDFLSMTYRRRIRLEITMDMDDLHVPSLVPVYATADWHEREAYDMFGIVFDGHPGLTRIF 215
Query: 135 TDYGFEGHPLRKDFPVTG 152
++GHP RKD+P+ G
Sbjct: 216 MPDDWDGHPQRKDYPLGG 233
>gi|158317834|ref|YP_001510342.1| NADH dehydrogenase subunit C [Frankia sp. EAN1pec]
gi|158113239|gb|ABW15436.1| NADH (or F420H2) dehydrogenase, subunit C [Frankia sp. EAN1pec]
Length = 229
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR--SNRF 72
+V V + GEL++ V L+ + LRDDP F + L GVD+ R
Sbjct: 69 ELGDAVERVVFAYGELTIHVRRERLLDVAWTLRDDPGLRFELLSSLSGVDYPDDLTGRRL 128
Query: 73 DVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H S + RRLRV+++VA+ +PS+ ++P ADW ERE +D++GI +EGH +L
Sbjct: 129 HSVVHLTSLTHRRRLRVEVSVADGDAVLPSLTPVWPTADWHEREAYDLFGIVYEGHHELT 188
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
RI+ + GHP RKD+P+ G + + Y
Sbjct: 189 RIMMPDDWVGHPQRKDYPLGG-IPVEYKGAQ 218
>gi|294630798|ref|ZP_06709358.1| NADH dehydrogenase I, C subunit [Streptomyces sp. e14]
gi|292834131|gb|EFF92480.1| NADH dehydrogenase I, C subunit [Streptomyces sp. e14]
Length = 245
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + ++ V GEL+ ++ L+ + LRDDP F
Sbjct: 70 DEVADELEGALEEQGLLPGNAIEKTVVDRGELTFHIEREHLLRVARTLRDDPALRFELCT 129
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREV 116
+ GV + R VYH S +NR +R++++ + + +PS+V +YP DW ERE
Sbjct: 130 GVSGVHYPHDKGRELHAVYHLRSITHNRLIRLEVSAPDDDRHIPSLVSVYPTNDWHERET 189
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
WD +GI F+GHP L RI+ ++GHP RKD+P+ G + + Y
Sbjct: 190 WDFFGIVFDGHPALTRIMMPDDWQGHPQRKDYPLGG-IPVEYKGAQ 234
>gi|227535969|ref|ZP_03966018.1| NADH dehydrogenase I chain C [Sphingobacterium spiritivorum ATCC
33300]
gi|227244212|gb|EEI94227.1| NADH dehydrogenase I chain C [Sphingobacterium spiritivorum ATCC
33300]
Length = 167
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 2 VRKIEDLG--DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+ K+ ++ + + F V+ A S G L++ D++ + +F++DD F+ + D
Sbjct: 1 MDKLTNIQLWERLQEHFGTKVKNASESYGLLTIQTSKTDIIDVLAFIKDDTILQFIYLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
+ V + ++ F VVYH S +N R+R+K+ + ++ GA+W ERE +D
Sbjct: 61 ITAVHYPNQEEAFAVVYHVHSLVHNVRIRIKVFIDGQHPAIPSATVLWNGANWMERETYD 120
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+GI FEGHPDLRRIL P+RK++P+ +
Sbjct: 121 FFGIQFEGHPDLRRILNVDEMTVFPMRKEYPLEDPNRV 158
>gi|119714786|ref|YP_921751.1| NADH dehydrogenase subunit C [Nocardioides sp. JS614]
gi|218534312|sp|A1SE29|NUOC_NOCSJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|119535447|gb|ABL80064.1| NADH dehydrogenase subunit C [Nocardioides sp. JS614]
Length = 250
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDVVYHFLSP 81
V GE++ + DL+ + LRDD F + GV + VYH LS
Sbjct: 99 VVIHRGEITFHLRREDLLPVAQVLRDDERLRFEFCAGVSGVHYPDETGRELHAVYHLLSM 158
Query: 82 KYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+NRR+R+++AV + +PSIV +YP DW ERE +DM+GI F+GHP L RIL +
Sbjct: 159 THNRRIRLEVAVPDADPHIPSIVPVYPTNDWHERETYDMFGIIFDGHPALTRILMPDDWP 218
Query: 141 GHPLRKDFPVTGFVELHYD------DKVKK 164
GHP RKD+P+ G V + Y ++
Sbjct: 219 GHPQRKDYPLGG-VPVEYKGGTVPPPDQRR 247
>gi|284992923|ref|YP_003411477.1| NADH (or F420H2) dehydrogenase subunit C [Geodermatophilus obscurus
DSM 43160]
gi|284066168|gb|ADB77106.1| NADH (or F420H2) dehydrogenase, subunit C [Geodermatophilus
obscurus DSM 43160]
Length = 245
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 10/152 (6%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS--------N 70
+V+ + GE++ V L++L LRDD F + GVD+L
Sbjct: 83 AVQRVLVDRGEITYFVAREHLLTLVRALRDDEALRFELCSSVSGVDYLDSGGPAAGPGRP 142
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
R VV H S Y RR+R+++AV E VPS+ +YP ADW ERE WDM+GI F+GHP
Sbjct: 143 RLHVVLHLTSMTYRRRIRLEVAVTAEDPHVPSVTSVYPTADWHERETWDMFGIVFDGHPA 202
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
L RIL ++GHP RKD+P+ G V + Y D
Sbjct: 203 LTRILMPDDWDGHPQRKDYPLGG-VPVEYHDA 233
>gi|269977614|ref|ZP_06184581.1| NADH dehydrogenase subunit c [Mobiluncus mulieris 28-1]
gi|269934217|gb|EEZ90784.1| NADH dehydrogenase subunit c [Mobiluncus mulieris 28-1]
Length = 266
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNRFDVVY 76
++ V GEL++ V G + ++ LRDD F + + GV + VY
Sbjct: 110 TAIERVVVDHGELTIYVSRGAIRAVAQALRDDQDLRFELCLGVSGVHYPHDTGRELHAVY 169
Query: 77 HFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
H +S +NR LRV+ + +PS+V IYPG +W ERE +DM+GI F GHP L R L
Sbjct: 170 HLMSVTHNRNLRVETTCPDADPKIPSVVDIYPGNNWHERETFDMFGIIFTGHPALTRSLL 229
Query: 136 DYGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 230 PDDWVGHPQRKDYPLGG 246
>gi|227874586|ref|ZP_03992749.1| NADH dehydrogenase subunit C [Mobiluncus mulieris ATCC 35243]
gi|306817870|ref|ZP_07451609.1| NADH-quinone oxidoreductase subunit C [Mobiluncus mulieris ATCC
35239]
gi|307701274|ref|ZP_07638295.1| NADH dehydrogenase, C subunit [Mobiluncus mulieris FB024-16]
gi|227844795|gb|EEJ54941.1| NADH dehydrogenase subunit C [Mobiluncus mulieris ATCC 35243]
gi|304649349|gb|EFM46635.1| NADH-quinone oxidoreductase subunit C [Mobiluncus mulieris ATCC
35239]
gi|307613435|gb|EFN92683.1| NADH dehydrogenase, C subunit [Mobiluncus mulieris FB024-16]
Length = 266
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNRFDVVY 76
++ V GEL++ V G + ++ LRDD F + + GV + VY
Sbjct: 110 TAIERVVVDHGELTIYVSRGAIRAVAQALRDDQDLRFELCLGVSGVHYPHDTGRELHAVY 169
Query: 77 HFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
H +S +NR LRV+ + +PS+V IYPG +W ERE +DM+GI F GHP L R L
Sbjct: 170 HLMSVTHNRNLRVETTCPDADPKIPSVVDIYPGNNWHERETFDMFGIIFTGHPALTRSLL 229
Query: 136 DYGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 230 PDDWVGHPQRKDYPLGG 246
>gi|320095550|ref|ZP_08027214.1| NADH-quinone oxidoreductase subunit C [Actinomyces sp. oral taxon
178 str. F0338]
gi|319977528|gb|EFW09207.1| NADH-quinone oxidoreductase subunit C [Actinomyces sp. oral taxon
178 str. F0338]
Length = 245
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 8 LGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + I + + V G+L++ + +V + S+LRDDP F + GV
Sbjct: 76 LEERIGADGLEVADVIEKVVVDRGQLTVFIAREHIVRVASYLRDDPDLRFEMCLGTNGVH 135
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+ VY S +NR +R++ A + IV +YP DW ERE WD+ GI
Sbjct: 136 YPADTGRELHAVYPLYSITHNRMIRLEAACPDEDPRIPSIVSVYPANDWQERETWDLLGI 195
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F GHP L R + GHP RKD+P+ G
Sbjct: 196 VFTGHPSLTRTALPDDWVGHPQRKDYPLGG 225
>gi|227494505|ref|ZP_03924821.1| NADH dehydrogenase (quinone) [Actinomyces coleocanis DSM 15436]
gi|226832239|gb|EEH64622.1| NADH dehydrogenase (quinone) [Actinomyces coleocanis DSM 15436]
Length = 242
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 8 LGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + I + V EL++ + L+ +C +LRDD F + + GV
Sbjct: 73 LEELIEAEGLAVKDVIERVVVDRDELTIFISRQHLLQVCQWLRDDQDLRFELCLGVSGVH 132
Query: 65 FLSRSNR-FDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ R F VY +S +NR LR+++ +PS+V IYPG DW ERE WD+ GI
Sbjct: 133 YPGDKGREFHAVYALMSVTHNRNLRLEVTCPDMDCRIPSVVSIYPGNDWHERETWDLMGI 192
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
F GHP L R + GHP RKD+P+ G V + Y
Sbjct: 193 IFTGHPGLTRTAMPDDWVGHPQRKDYPLGG-VPVEY 227
>gi|157166932|gb|ABV25446.1| NADH dehydrogenase subunit 9 [Silene noctiflora]
gi|255709052|gb|ACU30431.1| NADH dehydrogenase subunit 9 [Silene turkestanica]
Length = 131
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 88/126 (69%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D L L FLR + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+
Sbjct: 6 FDTTPAFLFQLLCFLRLHTYTRFEVLIDICGVDYPSRQVRFEVVYNLLSTRYNSRIRVQS 65
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + +V ++P A W+EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 66 SADEVTRISPVVSLFPSAGWWEREVWDMFGLSFINHPDLRRILTDYGFEGHPLRKDFPLS 125
Query: 152 GFVELH 157
G+VE+
Sbjct: 126 GYVEVR 131
>gi|86739253|ref|YP_479653.1| NADH dehydrogenase subunit C [Frankia sp. CcI3]
gi|86566115|gb|ABD09924.1| NADH dehydrogenase subunit C [Frankia sp. CcI3]
Length = 236
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR--SNRF 72
+V V GEL++ V LV++ LRDDP F + L GVD+ R
Sbjct: 76 QLGDAVERVVVDRGELTVHVRRESLVAVGQTLRDDPDLRFELLSSLSGVDYPDDVTGRRL 135
Query: 73 DVVYHFLSPKYNRRLRVKIA-VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H S + RR+RV+++ +VPS+ ++P ADW ERE +DM+GI + GHP L
Sbjct: 136 HSVAHLTSMTHRRRVRVEVSVTDADPTVPSLTSVWPTADWHERETYDMFGIVYTGHPGLT 195
Query: 132 RILTDYGFEGHPLRKDFPVTG 152
RI+ + GHP RKD+P+ G
Sbjct: 196 RIMMPDDWIGHPQRKDYPLGG 216
>gi|312200065|ref|YP_004020126.1| NADH (or F420H2) dehydrogenase, subunit C [Frankia sp. EuI1c]
gi|311231401|gb|ADP84256.1| NADH (or F420H2) dehydrogenase, subunit C [Frankia sp. EuI1c]
Length = 229
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR--SNRFD 73
++ V GEL+L V L+ + LRDDP F + L G D+ R
Sbjct: 70 LDEAIELVVVDRGELTLHVRRERLLDVARTLRDDPALRFELLSSLSGADYPDDPSGRRLH 129
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
V H LS + RR+RV+++V+ +PS+ ++P ADW ERE +D +GI +EGH L R
Sbjct: 130 SVAHLLSLTHRRRIRVEVSVSVEDPTMPSLTPVWPTADWHERETYDFFGIVYEGHHALTR 189
Query: 133 ILTDYGFEGHPLRKDFPVTG 152
I+ + GHP RKD+P+ G
Sbjct: 190 IMMPDDWIGHPQRKDYPLGG 209
>gi|42524475|ref|NP_969855.1| NADH dehydrogenase I,D subunit [Bdellovibrio bacteriovorus HD100]
gi|81616435|sp|Q6MIR5|NUOCD_BDEBA RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D; AltName: Full=NUO3/NUO4
gi|39576684|emb|CAE80848.1| NADH dehydrogenase I,D subunit [Bdellovibrio bacteriovorus HD100]
Length = 560
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 65/150 (43%), Positives = 92/150 (61%), Gaps = 6/150 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSV--GELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+ K+E+L + F + + G+ ++V D +L FLR F ++D
Sbjct: 1 MNKLENLKQLLAGKF--KIENFKFTHAVGDDVIEVPKEDAPALLLFLR--ESGQFDFLMD 56
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+CG D+ SR RFDVVY+ + K + RLRVK V EG+S+ + + Y GADWFERE +DM
Sbjct: 57 VCGADYPSREKRFDVVYNLFNSKDSSRLRVKAQVGEGESIGTAIPAYRGADWFEREAYDM 116
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+GI FEGHP+LR+ILT + F GHPLRKD+
Sbjct: 117 FGIIFEGHPNLRKILTHHQFVGHPLRKDYD 146
>gi|296169190|ref|ZP_06850843.1| NADH-quinone oxidoreductase subunit C/D [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896088|gb|EFG75755.1| NADH-quinone oxidoreductase subunit C/D [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 235
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ L + + FS ++ V EL+L V L + LRDDP F + + G
Sbjct: 64 DKLAEALKGAGVEFSDAIEKVVVYRDELTLHVRREALPGVAQHLRDDPDLRFEMCLGVSG 123
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + VY S +NRR+R+++A +G +PS+ +YP DW ERE +D +
Sbjct: 124 VHYPHETGRELHAVYPLQSITHNRRVRLEVAAPDGDPHIPSLYKVYPTTDWHERETYDFF 183
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI + GHP RKD+P+ G + + Y
Sbjct: 184 GIIFDGHPSLTRIEMPDDWHGHPQRKDYPLGG-IPVEYKGAQ 224
>gi|297625730|ref|YP_003687493.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921495|emb|CBL56049.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 255
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+D+ D + G + GE++ VD L+ L LRDD F + + GV +
Sbjct: 86 DDVADRMAELVPGFATRVMVHRGEITFFVDRDKLLELAKHLRDDEALRFEICVSVSGVHY 145
Query: 66 LSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
+ + V+H LS YNRR+R+++ V+E +PS+V +YP A++ ERE WDM+GI
Sbjct: 146 PEQTGHELHAVFHLLSMTYNRRIRLEVEVSEDDPHLPSLVPVYPMANFHERETWDMFGII 205
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F+GHP L RIL + GHP RKD+P+ G
Sbjct: 206 FDGHPALTRILMPDDWVGHPQRKDYPLGG 234
>gi|328953789|ref|YP_004371123.1| NAD(P)H-quinone oxidoreductase subunit J [Desulfobacca acetoxidans
DSM 11109]
gi|328454113|gb|AEB09942.1| NAD(P)H-quinone oxidoreductase subunit J [Desulfobacca acetoxidans
DSM 11109]
Length = 152
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + F + G+ ++ V LV +C FLRDDP F + + GVD+ S
Sbjct: 6 NKLQAQFPDEIVDVYEFRGDATVTVKPEKLVEICEFLRDDPETSFRYLSSVSGVDYHPAS 65
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEGH 127
RF YH S + R+ +K A + PS+V ++ ADW ERE +D+ GI F GH
Sbjct: 66 PRFAATYHLYSHQNRNRIALKAFCANDDAPALPSVVSVWSTADWHEREAYDLVGIKFSGH 125
Query: 128 PDLRRILTDYGFEG-HPLRKDFPVTGF 153
PDLRRILT EG HPLRKD+P G+
Sbjct: 126 PDLRRILTPPECEGYHPLRKDYPQEGY 152
>gi|297201625|ref|ZP_06919022.1| NADH dehydrogenase subunit C [Streptomyces sviceus ATCC 29083]
gi|197711004|gb|EDY55038.1| NADH dehydrogenase subunit C [Streptomyces sviceus ATCC 29083]
Length = 247
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + ++ V GE++ ++ L+ + LRDDP F
Sbjct: 72 DEVADELEGALEEQGLLPGNAIEKTVVDRGEITFHIEREHLLRVAQTLRDDPALRFELCT 131
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV +L R VYH S +NR +R++++ + +PS+V +YP DW ERE
Sbjct: 132 GVSGVHYLHDKGRELHAVYHLRSITHNRLIRLEVSAPDADPHIPSLVSVYPTNDWHERET 191
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +GI F+GHP L RI+ ++GHP RKD+P+ G + + Y
Sbjct: 192 YDFFGIVFDGHPALTRIMMPDDWQGHPQRKDYPLGG-IPVEYKGAQ 236
>gi|255708964|gb|ACU30387.1| NADH dehydrogenase subunit 9 [Silene conoidea]
Length = 131
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 90/126 (71%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D + L FL+ + + ++D+CGVD+ SR+ RF+VVY+ LS ++N R+RV+
Sbjct: 6 FDTTKDFVFQLLCFLKLHSYTRYEVLVDICGVDYPSRNLRFEVVYNLLSTRFNSRIRVQT 65
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ + +PS+V ++P A+W ERE WDM+GI F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 66 SADAVRRIPSVVSLFPSANWCEREAWDMFGISFINHPDLRRILTDYGFEGHPLRKDFPLS 125
Query: 152 GFVELH 157
G+VE+
Sbjct: 126 GYVEVR 131
>gi|145225062|ref|YP_001135740.1| NADH dehydrogenase subunit C [Mycobacterium gilvum PYR-GCK]
gi|218534313|sp|A4TDC0|NUOC_MYCGI RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|145217548|gb|ABP46952.1| NADH dehydrogenase subunit C [Mycobacterium gilvum PYR-GCK]
Length = 226
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 3 RKIEDLGDYI-VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ L + + ++F+ S+ V EL+L+V LV + LRDDP F + +
Sbjct: 54 EVVDRLAEAVGDDAFTESIERVVIHRDELTLEVHRDRLVEVAQALRDDPALRFELCLGVS 113
Query: 62 GVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
GV + Y +S +NRR+R+++AV + +PS+ G+YP DW ERE +D
Sbjct: 114 GVHYPDDTGRELHAAYPLMSITHNRRIRLEVAVPDDDPHIPSLFGVYPTVDWHERETYDF 173
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+GI F+GHP L RI + GHP RKD+P+ G
Sbjct: 174 FGIIFDGHPSLTRIEMPDDWVGHPQRKDYPLGG 206
>gi|257054394|ref|YP_003132226.1| NADH dehydrogenase subunit C [Saccharomonospora viridis DSM 43017]
gi|256584266|gb|ACU95399.1| NADH dehydrogenase subunit C [Saccharomonospora viridis DSM 43017]
Length = 253
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDVVY 76
+++ GE++ V LV +C LRDD F + GVD+ R VY
Sbjct: 97 DAIQQVTIDRGEITFYVQREYLVDICRTLRDDEGLRFELCNSVSGVDYGVDVPQRLHSVY 156
Query: 77 HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
H S Y RR+R+++AV +PSIV +YP ADW ERE +DM+GI ++GHP L RIL
Sbjct: 157 HLTSMTYRRRIRLEVAVDVDDPHIPSIVDVYPTADWQEREAYDMFGIIYDGHPALTRILM 216
Query: 136 DYGFEGHPLRKDFPVTG 152
+EGHP RKD+P+ G
Sbjct: 217 PDDWEGHPQRKDYPLGG 233
>gi|289769832|ref|ZP_06529210.1| trifunctional NADH dehydrogenase I subunit B/C/D [Streptomyces
lividans TK24]
gi|289700031|gb|EFD67460.1| trifunctional NADH dehydrogenase I subunit B/C/D [Streptomyces
lividans TK24]
Length = 340
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V GEL+ ++ LV + LRDDP F + G
Sbjct: 169 DELEGALEEQGLLPDNAIEKTVVDRGELTFHIEREHLVRVARTLRDDPALRFELCTGVSG 228
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + R VYH S +NR +R++++ +G +PS+V +YP DW ERE +D +
Sbjct: 229 VHYPHDKGRELHAVYHLRSITHNRLIRLEVSAPDGDPHIPSLVSVYPTNDWHERETYDFF 288
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+ HP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 289 GIVFDDHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 329
>gi|258593433|emb|CBE69772.1| NADH-quinone oxidoreductase [NC10 bacterium 'Dutch sediment']
Length = 168
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 63/140 (45%), Positives = 88/140 (62%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ F + + E +L V GDL+ C +L++DP + + DL VD
Sbjct: 14 SRLRERFPEATFSTRSFRNETTLLVRLGDLIRFCRYLKEDPGLLYDFLSDLTAVDRFGDH 73
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
RF+VVYH S +Y +R+R+K+ V EG++VPS+ ++ ADW EREV+DM+GI FEGHPD
Sbjct: 74 PRFEVVYHLYSLQYKQRIRLKVHVEEGEAVPSVTTVWGVADWHEREVFDMFGIRFEGHPD 133
Query: 130 LRRILTDYGFEGHPLRKDFP 149
LRRIL G+EG PLRKD+P
Sbjct: 134 LRRILMPEGWEGCPLRKDYP 153
>gi|328925346|gb|AEB66292.1| NADH dehydrogenase subunit 9 [Silene coniflora]
Length = 136
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 93/128 (72%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D + L SFL+ + + ++D+CGVD+ SRS RF+VVY+ LS ++N R+ V+
Sbjct: 9 FDTTTDFVFQLLSFLKLHSYTRYEVLVDICGVDYPSRSLRFEVVYNLLSTRFNSRISVQT 68
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + +PS V ++P A+W ERE+WDM+GI F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 69 SADEVRRIPSAVSLFPSANWCEREIWDMFGISFINHPDLRRILTDYGFEGHPLRKDFPLS 128
Query: 152 GFVELHYD 159
G++E+ YD
Sbjct: 129 GYIEVRYD 136
>gi|328925348|gb|AEB66293.1| NADH dehydrogenase subunit 9 [Silene coniflora]
Length = 136
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 93/128 (72%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D + L SFL+ + + ++D+CGVD+ SRS RF+VVY+ LS ++N R+ V+
Sbjct: 9 FDTTTDFVFQLLSFLKLHSYTRYEVLVDICGVDYPSRSLRFEVVYNLLSTRFNSRISVQT 68
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + +PS V ++P A+W ERE+WDM+GI F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 69 SADEVRRIPSAVSLFPSANWCEREIWDMFGISFINHPDLRRILTDYGFEGHPLRKDFPLS 128
Query: 152 GFVELHYD 159
G++E+ YD
Sbjct: 129 GYIEVRYD 136
>gi|315445431|ref|YP_004078310.1| NADH dehydrogenase subunit C [Mycobacterium sp. Spyr1]
gi|315263734|gb|ADU00476.1| NADH dehydrogenase subunit C [Mycobacterium sp. Spyr1]
Length = 226
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 3 RKIEDLGDYI-VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ L + + ++F+ S+ V EL+L+V LV + LRDDP F + +
Sbjct: 54 EVVDRLAEAVGDDAFTESIERVVIHRDELTLEVHRDRLVEVAQALRDDPALRFELCLGVS 113
Query: 62 GVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
GV + Y +S +NRR+RV++AV + +PS+ G+YP DW ERE +D
Sbjct: 114 GVHYPDDTGRELHAAYPLMSITHNRRIRVEVAVPDDDPHIPSLFGVYPTVDWHERETYDF 173
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+GI F+GHP L RI + GHP RKD+P+ G
Sbjct: 174 FGIIFDGHPSLTRIEMPDDWVGHPQRKDYPLGG 206
>gi|39995449|ref|NP_951400.1| NADH dehydrogenase I subunit C [Geobacter sulfurreducens PCA]
gi|81703476|sp|Q74GA6|NUOC_GEOSL RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|39982212|gb|AAR33673.1| NADH dehydrogenase I, C subunit [Geobacter sulfurreducens PCA]
gi|298504448|gb|ADI83171.1| NADH dehydrogenase I, C subunit [Geobacter sulfurreducens KN400]
Length = 162
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + F+ S+ GE+++ V +V +C FL+ + D+
Sbjct: 1 MAENNRAVIK-LKEKFAASILDVREFRGEVTVTVAREKVVDICRFLK--ESLQYNLCTDV 57
Query: 61 CGVDFLS-RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWD 118
VD+L + RF VVY+ S RLR+K V + V + A+W EREV+D
Sbjct: 58 TAVDYLGKQEPRFMVVYNLYSIPNKDRLRLKAGVPDADCSIDTVSCVWNSANWLEREVYD 117
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+ G+ F HPDLRRIL + GHPLRKD+P+ G Y
Sbjct: 118 LMGVQFNNHPDLRRILMTDDWVGHPLRKDYPLQGPDREPY 157
>gi|239929612|ref|ZP_04686565.1| NADH dehydrogenase subunit C [Streptomyces ghanaensis ATCC 14672]
gi|291437936|ref|ZP_06577326.1| NuoC [Streptomyces ghanaensis ATCC 14672]
gi|291340831|gb|EFE67787.1| NuoC [Streptomyces ghanaensis ATCC 14672]
Length = 246
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + ++ V GEL+ ++ LV + LRDDP F
Sbjct: 71 DEVADELEGALEEQGLLPGNAIEKTVVDRGELTFHIEREHLVRVARTLRDDPALRFELCT 130
Query: 59 DLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + + VYH S +NR +R++++ + +PS+ +YP DW ERE
Sbjct: 131 GVSGVHYPNDKGRELHAVYHLRSITHNRLIRLEVSAPDSDPHIPSLFPVYPTNDWHERET 190
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +GI F+GHP L RI+ ++GHP RKD+P+ G + + Y
Sbjct: 191 YDFFGIVFDGHPALTRIMMPDDWQGHPQRKDYPLGG-IPVEYKGAQ 235
>gi|319950453|ref|ZP_08024367.1| NADH dehydrogenase subunit C [Dietzia cinnamea P4]
gi|319435876|gb|EFV91082.1| NADH dehydrogenase subunit C [Dietzia cinnamea P4]
Length = 259
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-RSNRF 72
SF+ +V V G+L+L V L ++ LRDDP F + GV +
Sbjct: 99 ASFAEAVERVVVHCGQLTLHVVREHLPAVALALRDDPDLRFEMSLGASGVHYPGATGREL 158
Query: 73 DVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VVY S +NRR+ ++ + VP++ +YP DW ERE +D +G+ F+GHP L
Sbjct: 159 HVVYPLQSITHNRRVMLETWAPDADPHVPTLTRVYPTTDWHERETYDFFGVIFDGHPSLT 218
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
RI +EGHP RKD+P+ G + + Y ++
Sbjct: 219 RIEMPDDWEGHPQRKDYPLGG-IAVQYKGATIPPPDQRR 256
>gi|254821136|ref|ZP_05226137.1| NADH dehydrogenase subunit C [Mycobacterium intracellulare ATCC
13950]
Length = 235
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 8 LGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + + F+ ++ V EL+L V L + LRD+P F + + GV
Sbjct: 66 LAEALKKGGVEFTDAIEKVVVYRNELTLHVRREALPQVAQRLRDEPQLRFEMCLGVSGVH 125
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
+ VY S +NRR+R++++ + +PS+ GIYP DW ERE +D +GI
Sbjct: 126 YPHEAGRELHAVYPLQSITHNRRVRLEVSAPDDDPHIPSLFGIYPTTDWHERETYDFFGI 185
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
F+GHP L RI + GHP RKD+P+ G + + Y
Sbjct: 186 IFDGHPSLTRIEMPDDWHGHPQRKDYPLGG-IPVEYKGAQ 224
>gi|149280568|ref|ZP_01886684.1| NADH dehydrogenase I chain C [Pedobacter sp. BAL39]
gi|149228683|gb|EDM34086.1| NADH dehydrogenase I chain C [Pedobacter sp. BAL39]
Length = 167
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++L + F G + G L+ + ++++ +FL+++ F + D
Sbjct: 1 MAEVTNQELVQALTEKFGGQIIGVNEPYGLLTFETHKDSIINVLTFLKENSIANFNFLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWD 118
+ V + + + VVYH S R+RVK+ + E ++ A+W ERE +D
Sbjct: 61 ITAVHYPEKKHGIAVVYHLHSMVKRIRVRVKVFIDENHPTIPTATTLWNAANWMERETYD 120
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+G+ FEGHPDLRRIL HP+ K +P+ +
Sbjct: 121 FFGVRFEGHPDLRRILNMDELGVHPMLKQYPLEDPNRV 158
>gi|284106848|ref|ZP_06386291.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Candidatus
Poribacteria sp. WGA-A3]
gi|283830027|gb|EFC34303.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Candidatus
Poribacteria sp. WGA-A3]
Length = 583
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNS--VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ + + + F +V G+LS V DLV + FL DDP F ++ D+C
Sbjct: 1 MHRVLETLHERFPEAVLSVREDPQRGDLSAQVRAQDLVEVARFLHDDPGMAFDHLTDICS 60
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDMYG 121
D+ RF+V+YHFLS +N R+R+K V E + ++ I+ GA++ EREV+D+ G
Sbjct: 61 ADYPDDLERFEVIYHFLSLPHNTRIRLKTRVTEEQPTLGTVTSIWKGANFLEREVYDLMG 120
Query: 122 IFFEGHPDLRRILTDYGF-EGHPLRKDFPVTG 152
I FEGHPDLRRIL + EGHPLRKDFP G
Sbjct: 121 ITFEGHPDLRRILLPEDYEEGHPLRKDFPTEG 152
>gi|229490832|ref|ZP_04384667.1| NADH-quinone oxidoreductase subunit c [Rhodococcus erythropolis
SK121]
gi|229322222|gb|EEN88008.1| NADH-quinone oxidoreductase subunit c [Rhodococcus erythropolis
SK121]
Length = 220
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRF 72
++F+ ++ V E++L V+ L + LRD+ F + + GV +
Sbjct: 60 STFTDAIERVVIFRDEMTLHVERSHLPQVARRLRDESELRFELCLGVDGVHYPQDTGREL 119
Query: 73 DVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VY F S +NRR+R++++V + +PSIVGIYP DW ERE +D +GI F+GHP L
Sbjct: 120 HAVYPFASITHNRRIRLEVSVPDSDPHIPSIVGIYPTNDWHERETYDFFGIVFDGHPALT 179
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
RI ++GHP RKD+P+ G + + Y
Sbjct: 180 RIEMPDDWKGHPQRKDYPLGG-IPVEYKGAQ 209
>gi|298346120|ref|YP_003718807.1| NADH dehydrogenase subunit C [Mobiluncus curtisii ATCC 43063]
gi|298236181|gb|ADI67313.1| NADH dehydrogenase subunit C [Mobiluncus curtisii ATCC 43063]
Length = 246
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNRFDVVY 76
++ V S GEL++ V LV++ LRDD F + + GV + VY
Sbjct: 90 TAIDRVVVSHGELTIHVAREHLVTVAKALRDDQDLRFELCMGVSGVHYPHDTGQELHAVY 149
Query: 77 HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
HF+S +N LR++ A E +PSIV IYPG +W ERE +DM GI F GHP L R L
Sbjct: 150 HFISVTHNHNLRIETAAPEDDPKIPSIVDIYPGNNWHEREAFDMMGIIFTGHPALTRSLL 209
Query: 136 DYGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 210 PDDWVGHPQRKDYPLGG 226
>gi|72163092|ref|YP_290749.1| NADH dehydrogenase subunit C [Thermobifida fusca YX]
gi|71916824|gb|AAZ56726.1| NADH (or F420H2) dehydrogenase, subunit C [Thermobifida fusca YX]
Length = 252
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+E I + ++ V GE++ V L+ + + LRDDP F + +
Sbjct: 80 ADALERSLKEIGTPYDTAISRVVVDRGEITFHVQREHLLDVATRLRDDPALRFELCLGVT 139
Query: 62 GVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDM 119
GV + N VY S +N +R++++ + +PSIV +YP DW ERE WD
Sbjct: 140 GVHYPEDEGNELHAVYALRSITHNYEIRLEVSCPDSDPHIPSIVSVYPTNDWHEREAWDF 199
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVELH 157
+GI F+GHP L RI + GHP RKD+P+ G VE
Sbjct: 200 FGIIFDGHPALTRIHMPDDWHGHPQRKDYPLGGIPVEYR 238
>gi|206891118|ref|YP_002248946.1| NADH-quinone oxidoreductase chain c 2 [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206743056|gb|ACI22113.1| NADH-quinone oxidoreductase chain c 2 [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 201
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ + F V G++S+ V + + +L++ F ++ DLCGVD+
Sbjct: 37 KIAYKLKEQFPEEVIEIKEFRGQVSVIVKSNKIKEILKYLKNQQ--GFNHLQDLCGVDYS 94
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
RF++VY+ S +RV+ V E + S+ ++ GA+W ERE +DM+GI F
Sbjct: 95 PEKPRFEIVYNLYSIWRRLHIRVRAKVNEETPELDSVTDLWEGANWHERECFDMFGIRFI 154
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTG 152
GHPDLRRIL + G+PLRKD+P+ G
Sbjct: 155 GHPDLRRILMPEDWNGYPLRKDYPLKG 181
>gi|328884314|emb|CCA57553.1| NADH-ubiquinone oxidoreductase chain C [Streptomyces venezuelae
ATCC 10712]
Length = 243
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V GEL+ ++ LV + LRDDP F + G
Sbjct: 72 DELEGALEEQGLLPDNAIEKTVVDRGELTFHIEREHLVRVARTLRDDPALRFELCTGVSG 131
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + R VYH S + R +R++++ + +PS+V +YP DW ERE +D +
Sbjct: 132 VHYPGDKGRELHAVYHLRSLTHGRLIRLEVSAPDADPHIPSLVAVYPTNDWHEREAYDFF 191
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI+ ++GHP RKD+P+ G + + Y
Sbjct: 192 GIVFDGHPALTRIMMPDDWQGHPQRKDYPLGG-IAVEYKGAQ 232
>gi|296140853|ref|YP_003648096.1| NADH (or F420H2) dehydrogenase, subunit C [Tsukamurella
paurometabola DSM 20162]
gi|296028987|gb|ADG79757.1| NADH (or F420H2) dehydrogenase, subunit C [Tsukamurella
paurometabola DSM 20162]
Length = 236
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNRFDV 74
F+ +VR V GE++L V +V++ LRDDP F + GV F
Sbjct: 78 FAEAVRSVVVHRGEVTLRVPRQHVVAVARLLRDDPSLRFEMCLGTSGVHFPEDTGAELRA 137
Query: 75 VYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
V H S + RRLR++ + +PS++ +YP DW ERE +D +GI F+GHP L RI
Sbjct: 138 VTHLQSITWGRRLRLETHCPQADPHIPSLISVYPTVDWHERETFDFFGIVFDGHPSLTRI 197
Query: 134 LTDYGFEGHPLRKDFPVTG 152
++GHP RKD+P+ G
Sbjct: 198 EMPDDWDGHPQRKDYPLGG 216
>gi|329944204|ref|ZP_08292463.1| NADH dehydrogenase, C subunit [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328530934|gb|EGF57790.1| NADH dehydrogenase, C subunit [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 261
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-RSNRFDVVYH 77
++ V EL+L + L+ + LRDD F + + GV +
Sbjct: 105 AIEKVVIEHDELTLFIAREHLLDVVRPLRDDQDLRFELCLGVSGVHYPQLAGRELHACIE 164
Query: 78 FLSPKYNRR-LRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
+S + R LR+++A E VPSIV +YPG DW ERE WD+ GI F+GHP L R
Sbjct: 165 LMSLTHGGRQLRLQVACPETDPHVPSIVSVYPGNDWHERETWDLMGIVFDGHPHLTRTAM 224
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ GHP RKD+P+ G + + Y
Sbjct: 225 PDDWVGHPQRKDYPLGG-IPVEYKGAQ 250
>gi|320532541|ref|ZP_08033351.1| NADH dehydrogenase, subunit C [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320135246|gb|EFW27384.1| NADH dehydrogenase, subunit C [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 261
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-RSNRFDVVYH 77
++ V EL+L + L+ + LRDD F + + GV +
Sbjct: 105 AIEKVVIEHDELTLFIAREHLLDVARPLRDDQDLRFELCLGVSGVHYPELTGRELHACIQ 164
Query: 78 FLSPKYNRR-LRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
+S + R LR+++A + VPS+V +YPG DW ERE WD+ GI F+GHP L R
Sbjct: 165 LMSLTHGGRQLRLQVACPDSDPHVPSLVSLYPGNDWHERETWDLMGIVFDGHPHLTRTAM 224
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ GHP RKD+P+ G + + Y
Sbjct: 225 PDDWVGHPQRKDYPLGG-IPVEYKGAQ 250
>gi|304390120|ref|ZP_07372074.1| NADH-quinone oxidoreductase subunit C [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326602|gb|EFL93846.1| NADH-quinone oxidoreductase subunit C [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 246
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNRFDVVY 76
++ V S GEL++ V LV++ LRDD F + + GV + VY
Sbjct: 90 TAIDRVVVSHGELTIHVAREHLVTVAKALRDDQDLRFELCMGVSGVHYPHDTGQELHAVY 149
Query: 77 HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
HF+S +N LR++ A E +PSIV IYPG +W ERE +DM GI F GHP L R L
Sbjct: 150 HFISVTHNHNLRIETAAPEDDPKIPSIVDIYPGNNWHEREAFDMMGIIFTGHPALTRSLL 209
Query: 136 DYGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 210 PDDWVGHPQRKDYPLGG 226
>gi|315654699|ref|ZP_07907605.1| NADH-quinone oxidoreductase subunit C [Mobiluncus curtisii ATCC
51333]
gi|315491163|gb|EFU80782.1| NADH-quinone oxidoreductase subunit C [Mobiluncus curtisii ATCC
51333]
Length = 246
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 10 DYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
DY+ ++ V S GEL++ V LV++ LRDD F + + G
Sbjct: 75 DYLEEDLRGAGVDPHTAIDRVVVSHGELTIHVAREHLVTVAKALRDDQDLRFELCMGVSG 134
Query: 63 VDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + VYHF+S +N LR++ A E +PSIV IYPG +W ERE +DM
Sbjct: 135 VHYPHDTGQELHAVYHFISVTHNHNLRIETAAPEDDPKIPSIVDIYPGNNWHEREAFDMM 194
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
GI F GHP L R L + GHP RKD+P+ G
Sbjct: 195 GIIFTGHPALTRSLLPDDWVGHPQRKDYPLGG 226
>gi|315657377|ref|ZP_07910259.1| NADH-quinone oxidoreductase subunit C [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315491849|gb|EFU81458.1| NADH-quinone oxidoreductase subunit C [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 246
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 59/152 (38%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 10 DYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
DY+ ++ V S GEL++ V LV++ LRDD F + + G
Sbjct: 75 DYLEEDLRGAGVDPHTAIDRVVVSHGELTIHVAREHLVTVAKALRDDQDLRFELCMGVSG 134
Query: 63 VDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + VYHF+S +N LR++ A E VPSIV IYPG +W ERE +DM
Sbjct: 135 VHYPHDTGQELHAVYHFISVTHNHNLRIETAAPEDDPKVPSIVDIYPGNNWHEREAFDMM 194
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
GI F GHP L R L + GHP RKD+P+ G
Sbjct: 195 GIIFTGHPALTRSLLPDDWVGHPQRKDYPLGG 226
>gi|326772150|ref|ZP_08231435.1| NADH dehydrogenase I, C subunit [Actinomyces viscosus C505]
gi|326638283|gb|EGE39184.1| NADH dehydrogenase I, C subunit [Actinomyces viscosus C505]
Length = 258
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-RSNRFDVVYH 77
++ V EL+L + L+ + LRDD F + + GV +
Sbjct: 102 AIEKVVIEHDELTLFIAREHLLDVARPLRDDQDLRFELCLGVSGVHYPELAGRELHACIQ 161
Query: 78 FLSPKYNRR-LRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
F+S + R LR+++A E VPS+V +YPG DW ERE WD+ GI F+GHP L R
Sbjct: 162 FMSLTHGGRQLRLQVACPETDPHVPSLVSLYPGNDWHERETWDLMGIVFDGHPHLTRTAM 221
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ GHP RKD+P+ G + + Y
Sbjct: 222 PDDWVGHPQRKDYPLGG-IPVEYKGAQ 247
>gi|302543442|ref|ZP_07295784.1| NADH dehydrogenase I, C subunit [Streptomyces hygroscopicus ATCC
53653]
gi|302461060|gb|EFL24153.1| NADH dehydrogenase I, C subunit [Streptomyces himastatinicus ATCC
53653]
Length = 245
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V EL+ + L + LRDDP F + G
Sbjct: 74 DELEGALEEQSLLPDNAIEKTVVDRDELTFHIAREHLPRVARTLRDDPALRFELCTGVSG 133
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V F R VYH S +NR +R++++ + +PSIV +YP DW ERE +D +
Sbjct: 134 VHFPGDKGRELHAVYHLRSITHNRVIRLEVSAPDSDPHIPSIVDVYPTNDWHERETYDFF 193
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 194 GIVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 234
>gi|226306212|ref|YP_002766172.1| NADH-quinone oxidoreductase chain C [Rhodococcus erythropolis PR4]
gi|226185329|dbj|BAH33433.1| NADH-quinone oxidoreductase chain C [Rhodococcus erythropolis PR4]
Length = 220
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDV 74
F+ +V V E++L V+ L + LRD+P F + + GV +
Sbjct: 62 FAAAVERVVIFRDEMTLHVERSHLPQVARRLRDEPDLRFELCLGVDGVHYPQDTGRELHA 121
Query: 75 VYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
VY S +NRR+R++++V + +PSIVGIYP DW ERE +D +GI F+GHP L RI
Sbjct: 122 VYPLASITHNRRIRLEVSVPDSDPHIPSIVGIYPTNDWHERETYDFFGIVFDGHPALTRI 181
Query: 134 LTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
++GHP RKD+P+ G + + Y
Sbjct: 182 EMPDDWKGHPQRKDYPLGG-IPVEYKGAQ 209
>gi|325067539|ref|ZP_08126212.1| NADH dehydrogenase subunit C [Actinomyces oris K20]
Length = 258
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-RSNRFDVVYH 77
++ V EL+L + L+ + LRDD F + + GV +
Sbjct: 102 AIEKVVIEHDELTLFIAREHLLDVARPLRDDQDLRFELCLGVSGVHYPELAGRELHACIQ 161
Query: 78 FLSPKYNRR-LRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
+S + R LR+++A E VPS+V +YPG DW ERE WD+ GI F+GHP L R
Sbjct: 162 LMSLTHGGRQLRLQVACPETDPHVPSLVSLYPGNDWHERETWDLMGIVFDGHPHLTRTAM 221
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ GHP RKD+P+ G + + Y
Sbjct: 222 PDDWVGHPQRKDYPLGG-IPVEYKGAQ 247
>gi|300782453|ref|YP_003762744.1| NADH dehydrogenase I subunit C [Amycolatopsis mediterranei U32]
gi|299791967|gb|ADJ42342.1| NADH dehydrogenase I subunit C [Amycolatopsis mediterranei U32]
Length = 249
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/137 (41%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDVVY 76
++ GE++ V L S+ LRDD F + + GVD+ R VY
Sbjct: 93 EAILQTTVDRGEITFYVAREHLPSIAKTLRDDGGLRFELLSSVSGVDYGVDVPQRLHAVY 152
Query: 77 HFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
HF S Y RR+R+++ + E VPS+V YP ADW ERE WDM+GI F+GHP L RIL
Sbjct: 153 HFTSLTYRRRIRLEVTLDVEDAHVPSLVETYPTADWQEREAWDMFGIVFDGHPALTRILM 212
Query: 136 DYGFEGHPLRKDFPVTG 152
++GHP RKD+P+ G
Sbjct: 213 PDDWDGHPQRKDYPLGG 229
>gi|118462470|ref|YP_883187.1| NADH dehydrogenase subunit C [Mycobacterium avium 104]
gi|218534287|sp|A0QJU9|NUOC_MYCA1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|118163757|gb|ABK64654.1| NADH-quinone oxidoreductase chain c [Mycobacterium avium 104]
Length = 235
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ L + + + F ++ V EL+L VD L + LRDDP F + + G
Sbjct: 64 DTLTESLQSNGIEFHQAIEKVVVYRDELTLHVDRAALPHVAQHLRDDPRLRFEMCLGVSG 123
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + VY S +NRR+R+++AV +G +PS+ IYP DW ERE +D +
Sbjct: 124 VHYPHETGRELHAVYPLQSITHNRRVRLEVAVPDGDPHIPSLYRIYPTTDWHERETYDFF 183
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI + GHP RKD+P+ G + + Y
Sbjct: 184 GIIFDGHPSLTRIEMPDDWHGHPQRKDYPLGG-IPVEYKGAQ 224
>gi|291004453|ref|ZP_06562426.1| NADH dehydrogenase subunit C [Saccharopolyspora erythraea NRRL
2338]
Length = 252
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF-LSRSNRFDVVY 76
SV GE++ VD L+ +C LRDDP F + GVD+ R VY
Sbjct: 96 ESVLQVTVDRGEITFYVDRDHLLEICRSLRDDPALRFEMCASVSGVDYGPEVPQRLHSVY 155
Query: 77 HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
H LS Y RR+R+++A+ VPS+V +YP AD+ ERE +DM+GI ++GHP L RIL
Sbjct: 156 HLLSMTYRRRIRLEVALDVDDPHVPSVVEVYPTADYQERETYDMFGIVYDGHPALTRILM 215
Query: 136 DYGFEGHPLRKDFPVTG 152
++GHP RKD+P+ G
Sbjct: 216 PDDWDGHPQRKDYPLGG 232
>gi|254382441|ref|ZP_04997800.1| NADH dehydrogenase subunit C [Streptomyces sp. Mg1]
gi|194341345|gb|EDX22311.1| NADH dehydrogenase subunit C [Streptomyces sp. Mg1]
Length = 240
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + ++ V GEL+ + LV + S LRDDP F
Sbjct: 65 DEVADELEGALEEQGLVPGNAIEKTVVDRGELTFHIAREHLVQVASTLRDDPALRFELCT 124
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREV 116
+ GV F R VYH S + R +R++++ G VPS+V +YP DW ERE
Sbjct: 125 GVSGVHFPGDKGRELHAVYHLRSITHGRVVRLEVSAPNGDPHVPSLVAVYPTNDWHERET 184
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 185 YDFFGLIFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 229
>gi|41409301|ref|NP_962137.1| NADH dehydrogenase subunit C [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|81700409|sp|Q73V13|NUOC_MYCPA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|41398121|gb|AAS05751.1| NuoC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 235
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ L + + + F ++ V EL+L VD L + LRDDP F + + G
Sbjct: 64 DTLTESLQSNGIEFHQAIEKVVVYRDELTLHVDRAALPHVAQHLRDDPRLRFEMCLGVSG 123
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + VY S +NRR+R+++AV + +PS+ IYP DW ERE +D +
Sbjct: 124 VHYPHETGRELHAVYPLQSITHNRRVRLEVAVPDEDPHIPSLYRIYPTTDWHERETYDFF 183
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI + GHP RKD+P+ G + + Y
Sbjct: 184 GIVFDGHPSLTRIEMPDDWHGHPQRKDYPLGG-IPVEYKGAQ 224
>gi|134103328|ref|YP_001108989.1| NADH dehydrogenase subunit C [Saccharopolyspora erythraea NRRL
2338]
gi|218534330|sp|A4FPT9|NUOC_SACEN RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|133915951|emb|CAM06064.1| putative NADH dehydrogenase chain C [Saccharopolyspora erythraea
NRRL 2338]
Length = 249
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF-LSRSNRFDVVY 76
SV GE++ VD L+ +C LRDDP F + GVD+ R VY
Sbjct: 93 ESVLQVTVDRGEITFYVDRDHLLEICRSLRDDPALRFEMCASVSGVDYGPEVPQRLHSVY 152
Query: 77 HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
H LS Y RR+R+++A+ VPS+V +YP AD+ ERE +DM+GI ++GHP L RIL
Sbjct: 153 HLLSMTYRRRIRLEVALDVDDPHVPSVVEVYPTADYQERETYDMFGIVYDGHPALTRILM 212
Query: 136 DYGFEGHPLRKDFPVTG 152
++GHP RKD+P+ G
Sbjct: 213 PDDWDGHPQRKDYPLGG 229
>gi|315605128|ref|ZP_07880179.1| NADH-quinone oxidoreductase subunit C [Actinomyces sp. oral taxon
180 str. F0310]
gi|315313164|gb|EFU61230.1| NADH-quinone oxidoreductase subunit C [Actinomyces sp. oral taxon
180 str. F0310]
Length = 245
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 8 LGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + I S + G+L + V +V + S+LRDDP F + GV
Sbjct: 76 LEELIAADGLKVSDVIEKVTVDRGQLGIFVAREHIVRVASYLRDDPDLRFEMCLGTNGVH 135
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+ + +Y S +NR +R+++ + IV +YP DW ERE WD+ GI
Sbjct: 136 YPLDKGRELHAIYPLYSITHNRLIRLEVTCPDSDPRIPSIVSVYPANDWQERETWDLIGI 195
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F GHP L R + GHP RKD+P+ G
Sbjct: 196 IFTGHPSLTRTAMPDDWVGHPQRKDYPLGG 225
>gi|21222947|ref|NP_628726.1| NADH dehydrogenase subunit C [Streptomyces coelicolor A3(2)]
gi|81859292|sp|Q9XAQ6|NUOC_STRCO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|5042275|emb|CAB44529.1| NuoC, NADH dehydrogenase subunit [Streptomyces coelicolor A3(2)]
Length = 251
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V GEL+ ++ LV + LRDDP F + G
Sbjct: 80 DELEGALEEQGLLPDNAIEKTVVDRGELTFHIEREHLVRVARTLRDDPALRFELCTGVSG 139
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + R VYH S +NR +R++++ +G +PS+V +YP DW ERE +D +
Sbjct: 140 VHYPHDKGRELHAVYHLRSITHNRLIRLEVSAPDGDPHIPSLVSVYPTNDWHERETYDFF 199
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+ HP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 200 GIVFDDHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 240
>gi|254776457|ref|ZP_05217973.1| NADH dehydrogenase subunit C [Mycobacterium avium subsp. avium ATCC
25291]
Length = 235
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ L + + + F ++ V EL+L VD L + LRDDP F + + G
Sbjct: 64 DTLTESLQSNGIEFHQAIEKVVVYRDELTLHVDRAALPHVAQHLRDDPRLRFEMCLGVSG 123
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + VY S +NRR+R+++AV + +PS+ IYP DW ERE +D +
Sbjct: 124 VHYPHETGRELHAVYPLQSITHNRRVRLEVAVPDEDPHIPSLYRIYPTTDWHERETYDFF 183
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI + GHP RKD+P+ G + + Y
Sbjct: 184 GIIFDGHPSLTRIEMPDDWHGHPQRKDYPLGG-IPVEYKGAQ 224
>gi|227497896|ref|ZP_03928076.1| NADH dehydrogenase chain C [Actinomyces urogenitalis DSM 15434]
gi|226832688|gb|EEH65071.1| NADH dehydrogenase chain C [Actinomyces urogenitalis DSM 15434]
Length = 253
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDVVY 76
++ V G+L+L + L+ + LRDD F + + GV + +
Sbjct: 96 EAIEKVVIEHGQLTLFITREHLLDVVRPLRDDQDLRFELCLGVTGVHYPADSGRELHACF 155
Query: 77 HFLSPKYNRR-LRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
+S + R LR+++ E VPSIV +YPG DW ERE WD+ GI F+GHP+L R
Sbjct: 156 ELVSLTHGGRQLRLEVTCPESDPHVPSIVEVYPGDDWHERETWDLMGIVFDGHPNLTRSA 215
Query: 135 TDYGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 216 MPDDWVGHPQRKDYPLGG 233
>gi|256785939|ref|ZP_05524370.1| NADH dehydrogenase subunit C [Streptomyces lividans TK24]
Length = 251
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V GEL+ ++ LV + LRDDP F + G
Sbjct: 80 DELEGALEEQGLLPDNAIEKTVVDRGELTFHIEREHLVRVARTLRDDPALRFELCTGVSG 139
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + R VYH S +NR +R++++ +G +PS+V +YP DW ERE +D +
Sbjct: 140 VHYPHDKGRELHAVYHLRSITHNRLIRLEVSAPDGDPHIPSLVSVYPTNDWHERETYDFF 199
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+ HP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 200 GIVFDDHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 240
>gi|326382761|ref|ZP_08204451.1| NADH dehydrogenase subunit C [Gordonia neofelifaecis NRRL B-59395]
gi|326198351|gb|EGD55535.1| NADH dehydrogenase subunit C [Gordonia neofelifaecis NRRL B-59395]
Length = 230
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%)
Query: 6 EDLGDYIVNSFS-------GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + +V V G++++ V L+ + + LRD+P F +
Sbjct: 55 DEIADELEAGLARRGVAYDDAVEKVVVDRGDMTVFVTREHLLPVAATLRDEPTLRFELCL 114
Query: 59 DLCGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + VY S +NRR+R+++A+ + V +++ +YP DW ERE
Sbjct: 115 GVSGVHYPEESGRELHAVYPLRSITHNRRIRLEVAIPDADPHVTTLLPVYPTDDWHERET 174
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
+D +GI F+GHP L RI +EGHP RKD+P+ G V + Y + ++
Sbjct: 175 YDFFGIVFDGHPSLTRIEMPDDWEGHPQRKDYPLGG-VPVEYKGATIAPPEQRR 227
>gi|302553428|ref|ZP_07305770.1| NADH dehydrogenase subunit C [Streptomyces viridochromogenes DSM
40736]
gi|302471046|gb|EFL34139.1| NADH dehydrogenase subunit C [Streptomyces viridochromogenes DSM
40736]
Length = 336
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V EL+ ++ L+ + LRDDP F + G
Sbjct: 165 DELEGALEEQGLLPANAIEKTVVDRDELTFHIEREHLLLVARTLRDDPALRFELCTGVSG 224
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + + VYH S +NR +R++++ + +PS+ +YP DW ERE +D +
Sbjct: 225 VHYPSDKGRELHAVYHLRSITHNRLIRLEVSAPDSDPHIPSLFSVYPTNDWHERETYDFF 284
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 285 GIVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 325
>gi|193215670|ref|YP_001996869.1| NADH (or F420H2) dehydrogenase subunit C [Chloroherpeton thalassium
ATCC 35110]
gi|193089147|gb|ACF14422.1| NADH (or F420H2) dehydrogenase, subunit C [Chloroherpeton
thalassium ATCC 35110]
Length = 177
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + ++F ++ EL+ V ++ + FL+ F +D+CG D
Sbjct: 2 LNKVSIALQSAFPKALLETTKFRNELTFRVKKENIREISQFLK--EELGFNLCVDICGAD 59
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
+ RF+V+Y+ ++ ++N R+R+K+ + E K +PS++ ++P ADW+ERE +DM+GI
Sbjct: 60 RFNEEPRFEVIYNLMNLEHNTRIRLKVWLEEAKPHLPSVISVWPAADWYERETYDMFGIV 119
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F HPD+RRI FE P+RK+FP+ G
Sbjct: 120 FVNHPDMRRIYMPEDFEYFPMRKEFPLVG 148
>gi|289641425|ref|ZP_06473589.1| NADH (or F420H2) dehydrogenase, subunit C [Frankia symbiont of
Datisca glomerata]
gi|289508761|gb|EFD29696.1| NADH (or F420H2) dehydrogenase, subunit C [Frankia symbiont of
Datisca glomerata]
Length = 229
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR--SNRF 72
+ ++ V GEL+L V L+++ LRDD F + + G D+ R
Sbjct: 69 QLTDALERVVVDRGELTLHVRRDHLLAVAQTLRDDLQLRFELLSGVSGADYPDDPTGRRL 128
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VYH S + RR+R++++VA+ ++ ++P ADW ERE +D++GI F G L
Sbjct: 129 HAVYHLTSMTWRRRVRLEVSVADDDPTVPSVMAVWPTADWHERETYDLFGIVFSGRDGLE 188
Query: 132 RILTDYGFEGHPLRKDFPVTG 152
RI+ + GHP RKD+P+ G
Sbjct: 189 RIMMPDDWIGHPQRKDYPLGG 209
>gi|239980150|ref|ZP_04702674.1| NADH dehydrogenase subunit C [Streptomyces albus J1074]
gi|291452005|ref|ZP_06591395.1| NADH dehydrogenase subunit C [Streptomyces albus J1074]
gi|291354954|gb|EFE81856.1| NADH dehydrogenase subunit C [Streptomyces albus J1074]
Length = 251
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + + ++ V GEL+ ++ L+ + LRDDP F
Sbjct: 76 DEIADELEGALDEQGLLPANAIDRTVVDRGELTFHIEREHLLRVARTLRDDPALRFELCT 135
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ V + R VYH S + R +R++++ + +PS+V +YP DW ERE
Sbjct: 136 GVSAVHYPEDKGRELHAVYHLRSITHKRLIRLEVSAPDADPHIPSLVSVYPTNDWHEREA 195
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +G+ F+GHP L R++ ++GHP RKD+P+ G + + Y
Sbjct: 196 YDFFGLIFDGHPALTRLMMPDDWQGHPQRKDYPLGG-IAVEYKGAQ 240
>gi|162448794|ref|YP_001611161.1| NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So ce 56']
gi|161159376|emb|CAN90681.1| NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So ce 56']
Length = 217
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 63/155 (40%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +K+ +L + F G+V + G+ + +D FLR+DP +DL
Sbjct: 1 MSKKVLEL---LTAQFPGAVLETHSQFGDDTAVLDPAVWRDAALFLRNDPRTLMNMFVDL 57
Query: 61 CGVDFLSRS--NRFDVVYHFLSPKYNRRLRVKIAVAEGK----SVPSIVGIYPGADWFER 114
VD+L R RF+VV H S + N R+R+K V + + + SIV ++ GA+WFER
Sbjct: 58 TAVDYLWRGDVPRFEVVCHLRSLERNHRIRIKARVGDEEGNGAEIDSIVPVWKGANWFER 117
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
E +D+ GI F+GHPDLRRIL FEGHPLRKD+P
Sbjct: 118 ECYDLLGIVFKGHPDLRRILMYPEFEGHPLRKDYP 152
>gi|325673383|ref|ZP_08153074.1| NADH-quinone oxidoreductase subunit C [Rhodococcus equi ATCC 33707]
gi|325555404|gb|EGD25075.1| NADH-quinone oxidoreductase subunit C [Rhodococcus equi ATCC 33707]
Length = 250
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ D D + F ++ V GEL+L V L + LRDDP F + + G
Sbjct: 79 DALADALDTVGVHFDDAIEKVVVFRGELTLHVRREYLPTAARRLRDDPALRFELCLGVSG 138
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + VY +S + RR+R+++AV + +PS+ G+YP +DW ERE +D +
Sbjct: 139 VHYPQDPGRELHGVYPLMSVTHGRRVRLEVAVPDADPHIPSLYGVYPTSDWHERETYDFF 198
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
GI F+GHP L RI + GHP RKD+P+ G V + Y
Sbjct: 199 GIVFDGHPALTRIEMPDDWTGHPQRKDYPLGG-VPVEY 235
>gi|147832583|emb|CAN72618.1| hypothetical protein VITISV_029599 [Vitis vinifera]
Length = 149
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/134 (46%), Positives = 86/134 (64%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + I++CGVD SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 16 FQLLCFLKLHTYTKVQVSINICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRI 75
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
++ +P +EREVW M+G+ HPDL RI TDYGFEGHPLRKD P++G+VE+ YD
Sbjct: 76 SPVLSPFPSVVRWEREVWHMFGVSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYD 135
Query: 160 DKVKKVVYRPVELM 173
D K+VV P+E+
Sbjct: 136 DPEKRVVSEPIEMT 149
>gi|302035989|ref|YP_003796311.1| NADH-quinone oxidoreductase subunits C and D [Candidatus Nitrospira
defluvii]
gi|300604053|emb|CBK40385.1| NADH-quinone oxidoreductase, subunits C and D [Candidatus
Nitrospira defluvii]
Length = 583
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/152 (40%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNS--VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ L + ++ +F +VR E++ V +V + +L D P F +I D+C
Sbjct: 1 MQPLLERLMTTFPDAVRGVEVDTARNEITARVAAARIVDVARWLHDTPEASFDHITDICS 60
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYG 121
VD+ + RF+VVY LS + RR+R+K V E + S+ GI+ GA++ EREV+D+ G
Sbjct: 61 VDYPNDPERFEVVYQLLSLAHRRRIRLKARVTEEAPQIASVTGIWKGAEFMEREVYDLMG 120
Query: 122 IFFEGHPDLRRILTDYGF-EGHPLRKDFPVTG 152
I F GHPDLRRIL + EGHPLRKDFP G
Sbjct: 121 ITFVGHPDLRRILLPDDYEEGHPLRKDFPAEG 152
>gi|56791590|gb|AAW30333.1| NADH dehydrogenase subunit 9 [Laurus nobilis]
Length = 163
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 86/131 (65%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 33 FQLLCFLKFHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 92
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A W+EREVWDM G+ HPDLRRI TD+GFEGHPLRKD P++G+VE+ YD
Sbjct: 93 SPVVSPFPSAGWWEREVWDMSGVSSINHPDLRRISTDHGFEGHPLRKDLPLSGYVEVRYD 152
Query: 160 DKVKKVVYRPV 170
D K+V PV
Sbjct: 153 DPEKRVFLNPV 163
>gi|326799002|ref|YP_004316821.1| NAD(P)H-quinone oxidoreductase subunit J [Sphingobacterium sp. 21]
gi|326549766|gb|ADZ78151.1| NAD(P)H-quinone oxidoreductase subunit J [Sphingobacterium sp. 21]
Length = 167
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 1 MVR-KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + E L Y+ +F V G LS+ ++ + +FL+ + F+ + D
Sbjct: 1 MTKLNNETLIGYLKQAFESDVNGVEEPFGLLSITTSKEKILEVLAFLKTNKDLQFIYLTD 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWD 118
+ V + ++ VVYH S +N R+R+K+ + K +PS ++ GA+W ERE +D
Sbjct: 61 ITAVHYPEQALSIAVVYHVHSLVHNVRIRIKVFLDGTKPEIPSATSLWNGANWMERETYD 120
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+G+ F+GHPDLRRIL E P+RK++P+ +
Sbjct: 121 FFGVIFQGHPDLRRILNVDEMEVFPMRKEYPLEDPNRV 158
>gi|255708962|gb|ACU30386.1| NADH dehydrogenase subunit 9 [Silene conica]
Length = 131
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 90/126 (71%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D + L FL+ + + ++D+CGVD+ SR RF+VVY+ LS ++N R+R++
Sbjct: 6 FDTNTDFTFQLLCFLKLHSYTRYEVLVDICGVDYPSRKLRFEVVYNLLSTRFNSRIRIQS 65
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E +PS+V ++P A+W EREVWDM+GI F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 66 SADEVSRIPSVVSLFPSANWCEREVWDMFGISFINHPDLRRILTDYGFEGHPLRKDFPLS 125
Query: 152 GFVELH 157
G+VE+
Sbjct: 126 GYVEVR 131
>gi|153004159|ref|YP_001378484.1| NADH (or F420H2) dehydrogenase subunit C [Anaeromyxobacter sp.
Fw109-5]
gi|152027732|gb|ABS25500.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter sp.
Fw109-5]
Length = 174
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + + D +V F +V VG + V +V +C FL+ DP F
Sbjct: 1 MSKAVID---ALVERFPDAVYDPYVGVGGDDCAFVKKDRIVDVCRFLKSDPGMLFDMAPY 57
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWD 118
+ VD+L + RF+VVY+ LS K NRR R+++ V + VPS+ G++ GADWFER +D
Sbjct: 58 ITAVDYLGQEPRFEVVYNLLSLKTNRRARLRVKVPEQDAVVPSVTGLWRGADWFERYCFD 117
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRP 169
MYGI F GHPD+RR+L F GHPLRKD+P+ G L + +V+ +V P
Sbjct: 118 MYGIRFTGHPDMRRLLMYDEFVGHPLRKDYPLKGRQPLVQEREVRDIVRGP 168
>gi|302536170|ref|ZP_07288512.1| NADH dehydrogenase subunit C [Streptomyces sp. C]
gi|302445065|gb|EFL16881.1| NADH dehydrogenase subunit C [Streptomyces sp. C]
Length = 240
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 3 RKIEDLGDYIVNS--FS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+++L + ++ V GEL+L + LV + + LRDDP F
Sbjct: 66 EVVDELEGALEEQDLLPRNAIEKTVVDRGELTLHIAREHLVRVAATLRDDPALRFELCTG 125
Query: 60 LCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVW 117
+ GV F R VYH S + R LR++++V + +PS+V +YP DW ERE +
Sbjct: 126 VSGVHFPGDKGRELHAVYHLRSLTHGRILRLEVSVPDADPHLPSLVTVYPTNDWHEREAY 185
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
D +G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 186 DFFGLVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 229
>gi|189426185|ref|YP_001953362.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter lovleyi SZ]
gi|218534275|sp|B3E9W7|NUOC_GEOLS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|189422444|gb|ACD96842.1| NADH (or F420H2) dehydrogenase, subunit C [Geobacter lovleyi SZ]
Length = 162
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + F S+ G+ + V D+V++ +FL+ C F + D+ VD+L ++
Sbjct: 9 EKLQGKFEASILEVKQDRGDWIVTVKKEDIVAVLAFLK--QECKFDMLTDVTAVDYLGKA 66
Query: 70 -NRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+RF +VY S + RLR+K V + S +Y A+W EREV+D++GI F+ H
Sbjct: 67 ADRFMMVYQLTSVPFKDRLRIKAPVAEADCVIGSATQVYGSANWLEREVFDLFGIRFDKH 126
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGF 153
PDLRRIL +EGHPLRKD+P+ G
Sbjct: 127 PDLRRILMTPDWEGHPLRKDYPLQGP 152
>gi|226365382|ref|YP_002783165.1| NADH dehydrogenase subunit C [Rhodococcus opacus B4]
gi|226243872|dbj|BAH54220.1| NADH-quinone oxidoreductase chain C [Rhodococcus opacus B4]
Length = 239
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 55/150 (36%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 8 LGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
LG + S F +V V GE++ V L + LRD+P F + + GV
Sbjct: 70 LGAALAESGVGFEDAVESVVVFRGEVTFGVRREFLPVVARALRDEPDLRFEMCLGVNGVH 129
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGI 122
F VY LS +NRR+R+++AV + +PS+ +YP DW ERE +D +GI
Sbjct: 130 FPQEAGRELHAVYPLLSITHNRRIRLEVAVPDVDPHIPSLYDVYPTNDWHERETYDFFGI 189
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F+GHP L RI + GHP RKD+P+ G
Sbjct: 190 VFDGHPSLTRIEMPDDWPGHPQRKDYPLGG 219
>gi|215428603|ref|ZP_03426522.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis T92]
Length = 420
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVN-------SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+D+ D + F +V V EL+L V L + LRD+P F +
Sbjct: 245 DDIVDRLAEALRHERVEFEDAVEKVVVYRDELTLHVRRDLLPRVAQRLRDEPELRFELCL 304
Query: 59 DLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + VY S +NRRLR++++ + +PS+ IYP DW ERE
Sbjct: 305 GVSGVHYPHETGRELHAVYPLQSITHNRRLRLEVSAPDSDPHIPSLFAIYPTNDWHERET 364
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +GI F+GHP L RI ++GHP RKD+P+ G + + Y
Sbjct: 365 YDFFGIIFDGHPALTRIEMPDDWQGHPQRKDYPLGG-IPVEYKGAQ 409
>gi|255709002|gb|ACU30406.1| NADH dehydrogenase subunit 9 [Silene macrodonta]
Length = 131
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 90/126 (71%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D + L FL+ + + ++D+CGVD+ SR RF+VVY+ LS ++N RLRV+
Sbjct: 6 FDTNTDFAFQLLCFLKLHSYTRYEVLVDICGVDYPSRRLRFEVVYNLLSTRFNSRLRVQT 65
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E +PS+V ++P A+W EREVWDM+GI F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 66 SADEVSRIPSVVSLFPSANWCEREVWDMFGISFINHPDLRRILTDYGFEGHPLRKDFPLS 125
Query: 152 GFVELH 157
G+VE+
Sbjct: 126 GYVEVR 131
>gi|325105665|ref|YP_004275319.1| NADH dehydrogenase subunit C [Pedobacter saltans DSM 12145]
gi|324974513|gb|ADY53497.1| NADH dehydrogenase subunit C [Pedobacter saltans DSM 12145]
Length = 167
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + + F+ + G L+ + + ++ L SFL++D F + DL V +
Sbjct: 7 QQVIARLESRFASEISNIEEPYGLLTFETERSTILELLSFLKNDEELSFNYLTDLTAVHY 66
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFF 124
R+ VVYH S K N R+R+K + + ++ GA+W ERE +D +GI F
Sbjct: 67 PERNLALGVVYHLHSFKNNVRVRIKTFLPVSDPTIPTVTDLWNGANWMERETFDFFGIQF 126
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
GHPDLRRIL P+RK++P+ +
Sbjct: 127 IGHPDLRRILNVDDMTVFPMRKEYPLEDPNRV 158
>gi|117927478|ref|YP_872029.1| NADH dehydrogenase subunit C [Acidothermus cellulolyticus 11B]
gi|218534277|sp|A0LRI3|NUOC_ACIC1 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|117647941|gb|ABK52043.1| NADH dehydrogenase subunit C [Acidothermus cellulolyticus 11B]
Length = 192
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFD 73
++ GEL+ V L L LRDD F + L GV +
Sbjct: 33 RLPDAIERTDVDRGELTFHVRREYLRELALVLRDDERLRFELLNSLSGVHYPTDVGRELH 92
Query: 74 VVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
VVY S Y R +R+++A + +PS+V ++P AD+ ERE WDM+G+ F+GHP L R
Sbjct: 93 VVYELTSMTYRRHIRLEVAAPDADPHIPSVVDVWPTADFQERETWDMFGVIFDGHPALTR 152
Query: 133 ILTDYGFEGHPLRKDFPVTG 152
IL + GHP RKD+P+ G
Sbjct: 153 ILMPDDWPGHPQRKDYPLGG 172
>gi|56791596|gb|AAW30336.1| NADH dehydrogenase subunit 9 [Philodendron hederaceum var.
oxycardium]
Length = 160
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 64/125 (51%), Positives = 84/125 (67%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + ID+CGVD SR RF+VV++ LS +YN R+RV+ + E +
Sbjct: 36 FQLLCFLKFHTYTRVQVSIDICGVDHPSRKRRFEVVHNLLSTRYNSRIRVQTSADEVTRI 95
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
+V +P A W+EREVWDM G+ HPDLRRI TDYGFEGHPLRKDFP++G+VE+ YD
Sbjct: 96 SPVVSPFPSAGWWEREVWDMSGVSSINHPDLRRISTDYGFEGHPLRKDFPLSGYVEVRYD 155
Query: 160 DKVKK 164
D K+
Sbjct: 156 DPEKR 160
>gi|229821707|ref|YP_002883233.1| NADH (or F420H2) dehydrogenase, subunit C [Beutenbergia cavernae
DSM 12333]
gi|229567620|gb|ACQ81471.1| NADH (or F420H2) dehydrogenase, subunit C [Beutenbergia cavernae
DSM 12333]
Length = 240
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFD 73
+F +V V EL+LDV LV + LRDDP F + + GV +
Sbjct: 81 AFDDAVEKVVVDRDELTLDVRREHLVLVALSLRDDPDLRFDLSLGVSGVHYPADTGRELH 140
Query: 74 VVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
VYH S +NRRLR+++AV + VPS +YP DW ERE WD +GI F+GHP L R
Sbjct: 141 AVYHLHSITHNRRLRLEVAVPDADPHVPSTTAVYPANDWHERETWDFFGIVFDGHPALAR 200
Query: 133 ILTDYGFEGHPLRKDFPVTG 152
I + GHP RKD+P+ G
Sbjct: 201 IEMPDDWVGHPQRKDYPLGG 220
>gi|291334204|gb|ADD93871.1| NADH/F420H2 dehydrogenase subunit C [uncultured marine bacterium
MedDCM-OCT-S08-C1340]
Length = 192
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + + V ++L VD +L + LR+ F + DLC VD
Sbjct: 1 MNKIRELLQELIIDYVES-----DMITLTVDKLNLRKVLKTLRETKDLQFNQLTDLCAVD 55
Query: 65 FLSRSNRFD------------------------------------VVYHFLSPKYNRRLR 88
+ VVYH LS KYN R+R
Sbjct: 56 LIEYGESEWETKETTSKGYNRGINPQSHSRIDFVNEDVDEEYKLCVVYHLLSIKYNMRIR 115
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
VK ++ + + I+ ADW+ERE +D++G+ FEGH DLRRILTDYGF GHP RK
Sbjct: 116 VKCNLSNESLIVPSVTDIFASADWYEREAYDLFGVLFEGHQDLRRILTDYGFIGHPFRKK 175
Query: 148 FPVTGFVELHYDDKVKK 164
FP+ G ++ YD + KK
Sbjct: 176 FPLIGNTQVTYDPEQKK 192
>gi|239943478|ref|ZP_04695415.1| NADH dehydrogenase subunit C [Streptomyces roseosporus NRRL 15998]
gi|239989932|ref|ZP_04710596.1| NADH dehydrogenase subunit C [Streptomyces roseosporus NRRL 11379]
gi|291446949|ref|ZP_06586339.1| NuoC [Streptomyces roseosporus NRRL 15998]
gi|291349896|gb|EFE76800.1| NuoC [Streptomyces roseosporus NRRL 15998]
Length = 241
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V EL+ + L+ + LRDDP F + G
Sbjct: 70 DELEGALEEQDLLPENAIERTVVDRDELTFHIAREHLLQVARTLRDDPALRFELCTGVSG 129
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V F R VYH S + R +R++++ + +PS+V +YP DW ERE +D +
Sbjct: 130 VHFPGDKGRELHAVYHLRSLTHGRLIRLEVSAPDSDPHIPSLVEVYPTNDWHEREAYDFF 189
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 190 GLIFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IAVEYKGAQ 230
>gi|183981496|ref|YP_001849787.1| NADH dehydrogenase I (chain C) NuoC (NADH- ubiquinone
oxidoreductase chain C) [Mycobacterium marinum M]
gi|218534290|sp|B2HGE6|NUOC_MYCMM RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|183174822|gb|ACC39932.1| NADH dehydrogenase I (chain C) NuoC (NADH- ubiquinone
oxidoreductase chain C) [Mycobacterium marinum M]
Length = 238
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVN-------SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + F ++ V EL+L V L+ + LRD+P F +
Sbjct: 63 DEIADRLAEALNRDGVEFEDAIEKVVVYRNELTLHVRREALLRVAQSLRDEPELRFELCL 122
Query: 59 DLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + VY S +NRRLR++++ + +PS+ +YP DW ERE
Sbjct: 123 GVNGVHYPHETGRELHAVYPLQSITHNRRLRLEVSAPDSDPHIPSLYAVYPTNDWHERET 182
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +GI F+GHP L RI ++GHP RKD+P+ G + + Y
Sbjct: 183 YDFFGIIFDGHPSLTRIEMPDDWQGHPQRKDYPLGG-IPVEYKGAQ 227
>gi|118617948|ref|YP_906280.1| NADH dehydrogenase subunit C [Mycobacterium ulcerans Agy99]
gi|218534310|sp|A0PR40|NUOC_MYCUA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|118570058|gb|ABL04809.1| NADH dehydrogenase I (chain C) NuoC (NADH- ubiquinone
oxidoreductase chain C) [Mycobacterium ulcerans Agy99]
Length = 238
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVN-------SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + F ++ V EL+L V L+ + LRD+P F +
Sbjct: 63 DEIADRLAEALNRDGVEFEDAIEKVVVYRNELTLHVRREALLRVAQSLRDEPELRFELCL 122
Query: 59 DLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + VY S +NRRLR++++ + +PS+ +YP DW ERE
Sbjct: 123 GVNGVHYPHETGRELHAVYPLQSITHNRRLRLEVSAPDSDPHIPSLYAVYPTNDWHERET 182
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +GI F+GHP L RI ++GHP RKD+P+ G + + Y
Sbjct: 183 YDFFGIIFDGHPSLTRIEMPDDWQGHPQRKDYPLGG-IPVEYKGAQ 227
>gi|154508639|ref|ZP_02044281.1| hypothetical protein ACTODO_01140 [Actinomyces odontolyticus ATCC
17982]
gi|153798273|gb|EDN80693.1| hypothetical protein ACTODO_01140 [Actinomyces odontolyticus ATCC
17982]
Length = 245
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 8 LGDYIVN---SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + IV + + G+L + + + + +LRDD F + G
Sbjct: 76 LEELIVADGLEVADVIEKVTVDRGQLGIFIAREYIARVAKYLRDDADLRFEMCLGTNGAH 135
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+ + +Y S +NR +R+++ + IV +YPG DW ERE WD+ GI
Sbjct: 136 YPLDKGRELHAIYPLYSITHNRMIRLEVTCPDEDPRIPSIVSVYPGNDWQERETWDLIGI 195
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F GHP L R + GHP RKD+P+ G
Sbjct: 196 VFTGHPSLTRTAMPDDWVGHPQRKDYPLGG 225
>gi|255708944|gb|ACU30377.1| NADH dehydrogenase subunit 9 [Silene ammophila]
Length = 131
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 92/126 (73%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
D + L FL+ + + ++D+CGVD+ SRS RF+VVY+ LS ++N RLRV+
Sbjct: 6 FDTNTDFTFQLLCFLKLHSYTRYEVLVDICGVDYPSRSLRFEVVYNLLSTRFNSRLRVQS 65
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ E + +PS+V ++P A+W EREVWDM+GI F HPDLRRILTDYGFEGHPLRKDFP++
Sbjct: 66 SADEVRRIPSVVSLFPSANWCEREVWDMFGISFINHPDLRRILTDYGFEGHPLRKDFPLS 125
Query: 152 GFVELH 157
G+VE+
Sbjct: 126 GYVEVR 131
>gi|29831382|ref|NP_826016.1| NADH dehydrogenase subunit C [Streptomyces avermitilis MA-4680]
gi|29608497|dbj|BAC72551.1| putative NADH dehydrogenase I chain C (complex I) [Streptomyces
avermitilis MA-4680]
Length = 248
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + ++ V EL+ ++ L+ + LRDDP F
Sbjct: 73 DEVADELEGALEEQGLVPGNAIEKTVVDRDELTFHIEREYLLRVAQTLRDDPALRFELCT 132
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ V +L R VYH S +NR +R++++ + +PS+V +YP DW ERE
Sbjct: 133 GVSAVHYLEDKGRELHAVYHLRSITHNRLIRLEVSAPDADPHIPSLVSVYPTNDWHERET 192
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 193 YDFFGLIFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 237
>gi|293191718|ref|ZP_06609275.1| NADH dehydrogenase I, C subunit [Actinomyces odontolyticus F0309]
gi|292820490|gb|EFF79472.1| NADH dehydrogenase I, C subunit [Actinomyces odontolyticus F0309]
Length = 245
Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 8 LGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + I + + G+L + + + + +LRDD F + G
Sbjct: 76 LEELIAADGLDVADVIEKVTVDRGQLGIFIAREHIARVAKYLRDDADLRFEMCLGTNGAH 135
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+ + +Y S +NR +R+++ + IV +YPG DW ERE WD+ GI
Sbjct: 136 YPLDKGRELHAIYPLYSITHNRMIRLEVTCPDEDPRIPSIVSVYPGNDWQERETWDLIGI 195
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F GHP L R + GHP RKD+P+ G
Sbjct: 196 VFTGHPSLTRTAMPDDWVGHPQRKDYPLGG 225
>gi|46446195|ref|YP_007560.1| putative NADH-ubiquinone oxidoreductase chain C/D [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399836|emb|CAF23285.1| putative NADH-ubiquinone oxidoreductase chain C/D [Candidatus
Protochlamydia amoebophila UWE25]
Length = 174
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +I + D+I +F + GE + +V+ G L + +FL+ C F ++DL
Sbjct: 1 MTSQI--VLDHIKKNFQAFILNQTLEFGETTFEVNRGGLKIILNFLKIHEDCQFEVLMDL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD+L R ++Y + R+R+ I + G+ +P++ ++ GA+W+ERE++DM+
Sbjct: 59 TAVDYLFPVKRTQILYFLQNFSRLDRIRIGITIERGEMLPTVTDLWEGANWYERELFDMF 118
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
G+ F+GHP+L RIL + GHP+ +D+ +T V ++ KV +
Sbjct: 119 GVEFKGHPELSRILMPDHWLGHPMLRDYALTEEVVQFKNNVKPKVPSQ 166
>gi|329935995|ref|ZP_08285795.1| NADH dehydrogenase subunit C [Streptomyces griseoaurantiacus M045]
gi|329304473|gb|EGG48351.1| NADH dehydrogenase subunit C [Streptomyces griseoaurantiacus M045]
Length = 257
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + + + GEL+ ++ L ++ LRDDP F
Sbjct: 82 DEVADELEGALEEQGLVPGNVIDRTIVDRGELTFHIEREFLPAVAKTLRDDPALRFELCT 141
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ V + R VYH S +NR +R++++ + +PS+V +YP DW ERE
Sbjct: 142 GVSAVHYPGDKGRELHAVYHLRSLTHNRLIRLEVSAPDADPHIPSLVAVYPTNDWHEREA 201
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +GI F+GHP L RI+ ++GHP RKD+P+ G + + Y
Sbjct: 202 YDFFGIVFDGHPALTRIMMPDDWQGHPQRKDYPLGG-IPVEYKGAQ 246
>gi|307328623|ref|ZP_07607796.1| NADH (or F420H2) dehydrogenase, subunit C [Streptomyces
violaceusniger Tu 4113]
gi|306885735|gb|EFN16748.1| NADH (or F420H2) dehydrogenase, subunit C [Streptomyces
violaceusniger Tu 4113]
Length = 247
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V EL+ + L + LRDDP F + G
Sbjct: 76 DELEGALEEQSLLPENAIEKTVVDRDELTFHIAREHLPRVARTLRDDPALRFELCTGVSG 135
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V F R VYH S + R +R+++ + +PSIV +YP DW ERE +D +
Sbjct: 136 VHFPGDKGRELHAVYHLRSLTHGRVVRLEVCAPDSDPHIPSIVDVYPTNDWHERETYDFF 195
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 196 GLIFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 236
>gi|157166916|gb|ABV25438.1| NADH dehydrogenase subunit 9 [Silene latifolia]
Length = 131
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 63/118 (53%), Positives = 85/118 (72%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|302559105|ref|ZP_07311447.1| NADH dehydrogenase I, C subunit [Streptomyces griseoflavus Tu4000]
gi|302476723|gb|EFL39816.1| NADH dehydrogenase I, C subunit [Streptomyces griseoflavus Tu4000]
Length = 249
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V GEL+ ++ LV + LRDDP F + G
Sbjct: 78 DELEGALEEQDLLPENAIERTVVDRGELTFHIEREHLVRVARTLRDDPALRFELCTGVSG 137
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + + VYH S +NR +R++++ + +PS+ +YP DW ERE +D +
Sbjct: 138 VHYPNDKGRELHAVYHLRSITHNRLIRLEVSAPDSDPHIPSLFSVYPTNDWHERETYDFF 197
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GI F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 198 GIVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 238
>gi|320009202|gb|ADW04052.1| NADH (or F420H2) dehydrogenase, subunit C [Streptomyces
flavogriseus ATCC 33331]
Length = 238
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V GE++ V LV + LRDDP F + G
Sbjct: 67 DELEGALEEQDLLPANALEKTVVDRGEITFFVAREHLVQVARTLRDDPALRFELCTGVSG 126
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + R VYH S + R +R++++ + +PS+VG+YP DW ERE +D +
Sbjct: 127 VHYPGDKGRELHAVYHLRSLTHGRLIRLEVSAPDSDPHIPSLVGVYPTNDWHERETYDFF 186
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 187 GLIFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IAVEYKGAQ 227
>gi|282860721|ref|ZP_06269787.1| NADH (or F420H2) dehydrogenase, subunit C [Streptomyces sp. ACTE]
gi|282564457|gb|EFB69993.1| NADH (or F420H2) dehydrogenase, subunit C [Streptomyces sp. ACTE]
Length = 238
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V GEL+ + L + LRDDP F + G
Sbjct: 67 DELEGALEEQDLLPSEAIEKTVVDRGELTFHIAREHLPRVARTLRDDPALRFELCTGVSG 126
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V +L R VYH S + R +R++++ + +PS+V +YP DW ERE +D +
Sbjct: 127 VHYLGDKGRELHAVYHLRSLTHGRLIRLEVSTPDSDPHIPSLVEVYPTNDWHERETYDFF 186
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 187 GLVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IAVEYKGAQ 227
>gi|182436775|ref|YP_001824494.1| NADH dehydrogenase subunit C [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326777370|ref|ZP_08236635.1| NAD(P)H-quinone oxidoreductase subunit J [Streptomyces cf. griseus
XylebKG-1]
gi|178465291|dbj|BAG19811.1| putative NADH dehydrogenase chain C [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657703|gb|EGE42549.1| NAD(P)H-quinone oxidoreductase subunit J [Streptomyces cf. griseus
XylebKG-1]
Length = 243
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + ++ V EL+ + LV + LRDDP F + G
Sbjct: 72 DELEGALEEQDLLPSNAIEKTVVDRAELTFHIAREHLVQVARTLRDDPALRFELCTGVSG 131
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V F R VYH S + R +R++++ + +PS+V +YP DW ERE +D +
Sbjct: 132 VHFPGDKGRELHAVYHLRSLTHGRVIRLEVSAPDSDPHIPSLVEVYPTNDWHEREAYDFF 191
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 192 GLVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IAVEYKGAQ 232
>gi|297192786|ref|ZP_06910184.1| NADH-quinone oxidoreductase subunit C/D [Streptomyces
pristinaespiralis ATCC 25486]
gi|197721027|gb|EDY64935.1| NADH-quinone oxidoreductase subunit C/D [Streptomyces
pristinaespiralis ATCC 25486]
Length = 242
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSFS-------GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + +V V GEL+ + L+ + LRDDP F
Sbjct: 67 DEVADELEGALEEQGIVPEDAVEKTVVDRGELTFHIAREHLLQVARTLRDDPALRFELCT 126
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREV 116
+ GV +L R VYH S + R +R++++ VPS+V +YP DW ERE
Sbjct: 127 GVSGVHYLEDKGRELHAVYHLRSLTHGRLIRLEVSAPDRDPHVPSLVSVYPTNDWHERET 186
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 187 YDFFGLVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IAVEYKGAQ 231
>gi|302521196|ref|ZP_07273538.1| NADH dehydrogenase subunit C [Streptomyces sp. SPB78]
gi|302430091|gb|EFL01907.1| NADH dehydrogenase subunit C [Streptomyces sp. SPB78]
Length = 420
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-FDVVYHFLS 80
V GEL+ V+ LV + LRDDP F + GV + R VYH S
Sbjct: 268 KTVVDRGELTFHVEREHLVQVARTLRDDPALRFELCTGVSGVHYPGDKGRELHAVYHLRS 327
Query: 81 PKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+NR +RV+++V + + +PS+V +YP DW ERE +D +G+ F+GHP L RI+ +
Sbjct: 328 ITHNRLIRVEVSVPDADRHLPSLVALYPTNDWHERETYDFFGLIFDGHPALTRIMMPDDW 387
Query: 140 EGHPLRKDFPVTGFVELHYDDKV 162
+G P RKD+P+ G + + Y
Sbjct: 388 QGFPQRKDYPLGG-IPVEYKGAQ 409
>gi|318057841|ref|ZP_07976564.1| NADH dehydrogenase subunit C [Streptomyces sp. SA3_actG]
gi|318078939|ref|ZP_07986271.1| NADH dehydrogenase subunit C [Streptomyces sp. SA3_actF]
Length = 272
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 6 EDLGDYIVNS--FSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++L + +V V GEL+ V+ LV + LRDDP F + G
Sbjct: 101 DELEGALEEQGLVPENVLWKTVVDRGELTFHVEREHLVQVARTLRDDPALRFELCTGVSG 160
Query: 63 VDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + R VYH S +NR +RV+++V + + +PS+V +YP DW ERE +D +
Sbjct: 161 VHYPGDKGRELHAVYHLRSITHNRLIRVEVSVPDADRHLPSLVALYPTNDWHERETYDFF 220
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 221 GLIFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 261
>gi|325003722|ref|ZP_08124834.1| NADH dehydrogenase subunit C [Pseudonocardia sp. P1]
Length = 271
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 54/141 (38%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI-----IDLCGVDFLSRSNRF 72
++ E++L V L ++ LRDDP F +D D
Sbjct: 111 DAIEQVTIDRDEMTLYVLPDKLNAVARTLRDDPGLRFEFCATVSGVDYSAPDGSPVDRPV 170
Query: 73 DVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V YH LS Y RR+R+++A+ E V S+V +YP ADW ERE WDM+G+ F+GHP L
Sbjct: 171 HVAYHLLSMTYRRRIRLEVALDIENLHVDSVVDVYPTADWHERETWDMFGVVFDGHPALT 230
Query: 132 RILTDYGFEGHPLRKDFPVTG 152
RIL +EGHP RK +P+ G
Sbjct: 231 RILMPDDWEGHPQRKSYPLGG 251
>gi|118468371|ref|YP_886422.1| NADH dehydrogenase subunit C [Mycobacterium smegmatis str. MC2 155]
gi|218534326|sp|A0QU34|NUOC_MYCS2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|118169658|gb|ABK70554.1| NADH-quinone oxidoreductase chain c [Mycobacterium smegmatis str.
MC2 155]
Length = 238
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Query: 5 IEDLGDYI-VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
++ L + + ++ S+ V +L+++V L ++ S LRDDP F + + GV
Sbjct: 68 MDRLAEVLGEERYAMSIERVVVYRDQLTIEVSRVQLPAVASVLRDDPDLRFELCLGVSGV 127
Query: 64 DFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYG 121
+ VY +S +NRR+++++A + +PS+ +YP DW ERE +D +G
Sbjct: 128 HYPEDTGRELHAVYPLMSITHNRRIQLEVAAPDADPHIPSLYAVYPTTDWHERETYDFFG 187
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
I F+GHP L RI +EGHP RKD+P+ G
Sbjct: 188 IIFDGHPSLTRIEMPDDWEGHPQRKDYPLGG 218
>gi|255708934|gb|ACU30372.1| NADH dehydrogenase subunit 9 [Heliosperma pusillum]
Length = 131
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/118 (53%), Positives = 85/118 (72%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ F HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|54024634|ref|YP_118876.1| NADH dehydrogenase subunit C [Nocardia farcinica IFM 10152]
gi|81823071|sp|Q5YWC9|NUOC_NOCFA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|54016142|dbj|BAD57512.1| putative NADH dehydrogenase I chain C [Nocardia farcinica IFM
10152]
Length = 253
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR-SNRFDV 74
F ++ V GEL+L V LV++ LRDDP F + + GV +
Sbjct: 95 FGSALEKIVVFRGELTLHVRREHLVTVARLLRDDPALRFELCLGVNGVHYPDDAGRELHA 154
Query: 75 VYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
VY S +NR LRV+ + +PS+ +YP DW ERE +D +GI F+GHP L RI
Sbjct: 155 VYPLRSITHNRLLRVETCAPDTDPHIPSLFEVYPTTDWHERETYDFFGILFDGHPSLTRI 214
Query: 134 LTDYGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 215 TMPDDWRGHPQRKDYPLGG 233
>gi|282891848|ref|ZP_06300328.1| hypothetical protein pah_c198o041 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498281|gb|EFB40620.1| hypothetical protein pah_c198o041 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 173
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/142 (35%), Positives = 88/142 (61%), Gaps = 4/142 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + N ++ +GE +L+V +L+ + S+L+ D + ++DL GVD++ +
Sbjct: 8 ENLKNHCPEAILAQKQFLGETTLEVQKENLIKVLSYLKHD----YEVLMDLTGVDYVDPT 63
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
VVY +PK R+RV + V + +PS+ ++ GA W+ERE++D++G+ EGHPD
Sbjct: 64 PYTKVVYWLHNPKNFERIRVIVFVEREEPIPSVTCLWDGAAWYERELFDLFGVPIEGHPD 123
Query: 130 LRRILTDYGFEGHPLRKDFPVT 151
L+RIL ++GHPLR+D+P+T
Sbjct: 124 LKRILMPDDWKGHPLRRDYPLT 145
>gi|108798548|ref|YP_638745.1| NADH dehydrogenase subunit C [Mycobacterium sp. MCS]
gi|119867648|ref|YP_937600.1| NADH dehydrogenase subunit C [Mycobacterium sp. KMS]
gi|126434146|ref|YP_001069837.1| NADH dehydrogenase subunit C [Mycobacterium sp. JLS]
gi|122977219|sp|Q1BBP5|NUOC_MYCSS RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534303|sp|A1UDA2|NUOC_MYCSK RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534308|sp|A3PWR9|NUOC_MYCSJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|108768967|gb|ABG07689.1| NADH dehydrogenase subunit C [Mycobacterium sp. MCS]
gi|119693737|gb|ABL90810.1| NADH dehydrogenase subunit C [Mycobacterium sp. KMS]
gi|126233946|gb|ABN97346.1| NADH dehydrogenase subunit C [Mycobacterium sp. JLS]
Length = 231
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 6 EDLGDYIVNSFS-----GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+++ D + + SV V EL+L++ L + LRDD F + +
Sbjct: 58 DEVVDALAAALGQDLYDASVERIVVYRDELTLEIARARLPVVAKTLRDDAALRFELCLGV 117
Query: 61 CGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWD 118
GV + Y +S +NRR+R+++A + +PS+ +YP DW ERE +D
Sbjct: 118 SGVHYPGDAGRELHAAYPLMSITHNRRIRLEVAAPDDDPHIPSLFSVYPTTDWHERETYD 177
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+GI F+GHP L RI + GHP RKD+P+ G
Sbjct: 178 FFGIIFDGHPSLTRIEMPDDWVGHPQRKDYPLGG 211
>gi|262200418|ref|YP_003271626.1| NADH (or F420H2) dehydrogenase subunit C [Gordonia bronchialis DSM
43247]
gi|262083765|gb|ACY19733.1| NADH (or F420H2) dehydrogenase, subunit C [Gordonia bronchialis DSM
43247]
Length = 227
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 6 EDLGDYIVNSFSG----SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ D + S ++ V E++L V L + LR+ P F + +
Sbjct: 55 DEIADLLETELSDDYSDAIEKVVVFRDEMTLHVSRTHLRQVALLLRNHPDLRFELCLGVN 114
Query: 62 GVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDM 119
GV + VY S + RRLR++++ + +PSI IYP DW ERE +D
Sbjct: 115 GVHYPDDAGRELHAVYPLTSITHKRRLRLEVSAPDADPHIPSICDIYPTNDWHERETYDF 174
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+GI F+GH L RI +EGHP RKD+P+ G V + Y
Sbjct: 175 FGIIFDGHRSLTRIEMPDDWEGHPQRKDYPLGG-VPVEY 212
>gi|219847964|ref|YP_002462397.1| NADH (or F420H2) dehydrogenase subunit C [Chloroflexus aggregans
DSM 9485]
gi|219542223|gb|ACL23961.1| NADH (or F420H2) dehydrogenase, subunit C [Chloroflexus aggregans
DSM 9485]
Length = 172
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + + + + G++S+ + ++ LRDDP + + +L
Sbjct: 1 MNN--QTVLAVLRDRVGKEIVAVNEFRGDVSVTLTPSGYLAAAQLLRDDPELAYTFLENL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI-AVAEGKSVPSIVGIYPGADWFEREVWDM 119
CGVD+L R RF+VV H S ++ R+ +K+ +VPS+ ++P A++ ERE +D+
Sbjct: 59 CGVDYLGRKPRFEVVAHLTSMRHRHRVCLKVGCDEPNPTVPSLTPLFPTANYQERETFDL 118
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKV 165
GI F GHP L RIL + GHPLRKD+P+ G E+ + ++
Sbjct: 119 LGITFTGHPSLTRILLPEDWIGHPLRKDYPL-GEEEVAFTFNQDRI 163
>gi|290958258|ref|YP_003489440.1| NADH dehydrogenase subunit NuoC [Streptomyces scabiei 87.22]
gi|260647784|emb|CBG70889.1| NuoC, NADH dehydrogenase subunit [Streptomyces scabiei 87.22]
Length = 247
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSFSGS-------VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + + V GE++ ++ L ++ LRDDP F
Sbjct: 72 DEVADELEGALEEQGLVPENVIDKTVVDRGEITFHIEREHLPTVARTLRDDPALRFELCT 131
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + R VYH S +NR +R++++ + +PS+V +YP DW ERE
Sbjct: 132 GVSGVHYPGDKGRELHAVYHLRSITHNRLIRLEVSAPDADPHIPSLVPVYPTNDWHERET 191
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +GI F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 192 YDFFGIVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 236
>gi|254391139|ref|ZP_05006346.1| NADH-quinone oxidoreductase subunit C/D [Streptomyces clavuligerus
ATCC 27064]
gi|294814396|ref|ZP_06773039.1| NADH-quinone oxidoreductase subunit C [Streptomyces clavuligerus
ATCC 27064]
gi|326442786|ref|ZP_08217520.1| NADH dehydrogenase subunit C [Streptomyces clavuligerus ATCC 27064]
gi|197704833|gb|EDY50645.1| NADH-quinone oxidoreductase subunit C/D [Streptomyces clavuligerus
ATCC 27064]
gi|294326995|gb|EFG08638.1| NADH-quinone oxidoreductase subunit C [Streptomyces clavuligerus
ATCC 27064]
Length = 242
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSFSG-------SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + ++ V GEL+ ++ L+ + LRDDP F
Sbjct: 67 DEVADELEGALEEQGLVPEHAIAQTVVDRGELTFHIEREHLLQVARTLRDDPALRFELCT 126
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + R VYH S + R +RV+++ + +PS+V +YP DW ERE
Sbjct: 127 GVSGVHYPEDKGRELHAVYHLRSLTHGRLIRVEVSAPDADPHIPSLVSVYPTNDWHERET 186
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 187 YDFFGLVFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IAVEYKGAQ 231
>gi|255533961|ref|YP_003094333.1| NADH (or F420H2) dehydrogenase subunit C [Pedobacter heparinus DSM
2366]
gi|255346945|gb|ACU06271.1| NADH (or F420H2) dehydrogenase, subunit C [Pedobacter heparinus DSM
2366]
Length = 170
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 1 MVRKIED-LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRD---DPHCCFVN 56
M I + + + F V G L+ + ++ + FL+D + F
Sbjct: 1 MAELINQAIVEALGAKFGDKVIGVNEPYGLLTFETTKDVIIEVLKFLKDSGENDVTGFNF 60
Query: 57 IIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFERE 115
+ D+ V + + + VVYH + R+R+K+ + E V I+ GA+W ERE
Sbjct: 61 LTDITAVHYPEKKHGIAVVYHLHNMVKKVRVRIKVFIDEHNPVIPTATSIWNGANWMERE 120
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+D++G+ FEGHPDLRRIL HP+ K +P+ +
Sbjct: 121 TYDLFGVKFEGHPDLRRILNMDELGVHPMLKQYPLEDPNRV 161
>gi|311897892|dbj|BAJ30300.1| putative NADH-quinone oxidoreductase subunit C [Kitasatospora setae
KM-6054]
Length = 240
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-FDVVY 76
+ V GEL+ +D L+ LRDDP F + + GV + R VY
Sbjct: 84 DVIEKTVVDRGELTFHLDRAHLLKAVRTLRDDPALRFELCLGVSGVHYPQDKGRELHAVY 143
Query: 77 HFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
H S + R +R+++ + +V +YP DW ERE +D +G+ FEGHP L RI+
Sbjct: 144 HLRSITHTRLIRLEVTAPDADPRIPSVVSVYPTNDWHERETYDFFGLVFEGHPALTRIMM 203
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKV 162
+ GHP RKD+P+ G + + Y
Sbjct: 204 PDDWLGHPQRKDYPLGG-IPVEYKGAQ 229
>gi|269955279|ref|YP_003325068.1| NADH (or F420H2) dehydrogenase subunit C [Xylanimonas
cellulosilytica DSM 15894]
gi|269303960|gb|ACZ29510.1| NADH (or F420H2) dehydrogenase, subunit C [Xylanimonas
cellulosilytica DSM 15894]
Length = 283
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 3 RKIEDLGDYIVNS---FSGSVRFAVN----SVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ L + + F ++ V EL+L V L+++ LRDD F
Sbjct: 105 EAVDVLAEVLAEQGIGFDQAIERVVVDPPGKHAELTLWVAREHLLAVARALRDDQDLRFE 164
Query: 56 NIIDLCGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFE 113
+ + GV + VYH S + RRLR+++A + +PS +YP DW E
Sbjct: 165 LSLGVSGVHYPHDAGRELHAVYHLTSVTHGRRLRLEVATADADRHIPSTTSVYPTNDWHE 224
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
RE +D +GI F+GHP L RI + GHP RKD+P+ G
Sbjct: 225 RETYDFFGIVFDGHPGLARIEMPDDWPGHPQRKDYPLGG 263
>gi|326329612|ref|ZP_08195934.1| NADH dehydrogenase I, C subunit [Nocardioidaceae bacterium Broad-1]
gi|325952608|gb|EGD44626.1| NADH dehydrogenase I, C subunit [Nocardioidaceae bacterium Broad-1]
Length = 212
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SR 68
I ++ + + AV GEL+ V L+ LRD F + GV +
Sbjct: 50 KEIADALAFTEAEAVIHRGELTFHVRRERLLEALQVLRD--ELRFELCSGVSGVHYPADL 107
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGH 127
VYH LS YNRR+RV+ + + VPS VGIYP DW ERE +DM+GI F+GH
Sbjct: 108 GKELHAVYHLLSMTYNRRVRVETSAPDEDPHVPSGVGIYPTLDWHERETYDMFGIVFDGH 167
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTG 152
P L RIL + GHP RKD+P+ G
Sbjct: 168 PGLTRILMPDDWPGHPQRKDYPLGG 192
>gi|297159510|gb|ADI09222.1| NADH dehydrogenase subunit C [Streptomyces bingchenggensis BCW-1]
Length = 244
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 6 EDLGDYIVNSFSG-------SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+++ D + + ++ V EL+ + L + LRDDP F
Sbjct: 69 DEVADELEGALEEQSLVPENAIEKTVVDRDELTFHIAREHLPRVARTLRDDPALRFELCT 128
Query: 59 DLCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV F R VYH S +NR +R++++V + +PSIV +YP DW ERE
Sbjct: 129 GVSGVHFPGDKGRELHAVYHLRSITHNRLIRLEVSVPDSDPHLPSIVDVYPTNDWHEREA 188
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+D +G+ F+GHP L RI+ ++G P RKD+P+ G + + Y
Sbjct: 189 YDFFGLIFDGHPALTRIMMPDDWQGFPQRKDYPLGG-IPVEYKGAQ 233
>gi|11466318|ref|NP_051146.1| NADH dehydrogenase subunit 9 [Cafeteria roenbergensis]
gi|6180100|gb|AAF05797.1|AF193903_20 NADH dehydrogenase subunit 9 [Cafeteria roenbergensis]
Length = 210
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 87/151 (57%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
E+ + ++ L +++D+ D++ RF + Y LS ++ R+
Sbjct: 49 EILVYSPLEIILPASVTLASLSLFQLESLVDVACADYIQTQERFLLFYPLLSHSFSLRVG 108
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + + + S+ I+P A+W ERE WDM+G+ F HPDLRRILTDYGF+GHPLRKDF
Sbjct: 109 IVTLAHDLEWLSSLCSIFPNANWAEREAWDMFGVGFLSHPDLRRILTDYGFKGHPLRKDF 168
Query: 149 PVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
P+ G++E+ +++ V+ V Y PV + R +
Sbjct: 169 PLLGYLEVSFNNLVEFVEYLPVSISLSPRIF 199
>gi|163848442|ref|YP_001636486.1| NADH (or F420H2) dehydrogenase subunit C [Chloroflexus aurantiacus
J-10-fl]
gi|222526370|ref|YP_002570841.1| NADH (or F420H2) dehydrogenase subunit C [Chloroflexus sp.
Y-400-fl]
gi|163669731|gb|ABY36097.1| NADH (or F420H2) dehydrogenase, subunit C [Chloroflexus aurantiacus
J-10-fl]
gi|222450249|gb|ACM54515.1| NADH (or F420H2) dehydrogenase, subunit C [Chloroflexus sp.
Y-400-fl]
Length = 172
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F+ + G+LSL ++ FLRDDP + + +LCGVD+
Sbjct: 4 QTVLAALRERFAAEILAVNEFRGDLSLTFTPKGYLAAAQFLRDDPDLAYTFLENLCGVDY 63
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFF 124
L R RF+VV H S ++ R+ +K+ E + + ++P A++ ERE +D+ GI F
Sbjct: 64 LGRKPRFEVVAHLTSMRHRHRVCLKVGCDEPEPTVPSLTPLFPTANYQERETFDLLGIRF 123
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKV 165
+GHP L RIL + GHPLRKD P+ G E+ + +++
Sbjct: 124 DGHPSLTRILLPDDWVGHPLRKDHPL-GDEEIAFTFNQERI 163
>gi|120402881|ref|YP_952710.1| NADH dehydrogenase subunit C [Mycobacterium vanbaalenii PYR-1]
gi|218534320|sp|A1T6A4|NUOC_MYCVP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|119955699|gb|ABM12704.1| NADH dehydrogenase subunit C [Mycobacterium vanbaalenii PYR-1]
Length = 225
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 6 EDLGDYIVNSFS-----GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+D+ D + ++ SV V EL+L+V LV + LRDDP F + +
Sbjct: 52 DDVVDALESALGHDVFAESVERVVVYRDELTLEVHRDRLVDVAQTLRDDPDLRFELCLGV 111
Query: 61 CGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWD 118
GV + VY +S +NRR+R+++A + +PS+ +YP DW ERE +D
Sbjct: 112 SGVHYPDDADRELHAVYPLMSITHNRRIRIEVAAPDSDPHIPSLFRVYPTTDWHERETYD 171
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+G+ F+GHP L RI + GHP RKD+P+ G
Sbjct: 172 FFGLIFDGHPALTRIEMPDDWVGHPQRKDYPLGG 205
>gi|169629222|ref|YP_001702871.1| NADH dehydrogenase subunit C [Mycobacterium abscessus ATCC 19977]
gi|218534288|sp|B1MPG6|NUOC_MYCA9 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|169241189|emb|CAM62217.1| NADH-quinone oxidoreductase, C subunit NuoC [Mycobacterium
abscessus]
Length = 228
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 6 EDLGDYIVNS----FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ L + ++ +V V +L++ V LV + LRDDP F + +
Sbjct: 56 DRLESVLAEQENVTYADAVEGVVVYRDQLTIHVKAEHLVQVAQSLRDDPQLRFELSLGVS 115
Query: 62 GVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDM 119
GV + S VY +S +NRR+ +++AV E +PS+ +YP DW ERE +D
Sbjct: 116 GVHYPDDSARELHAVYPLMSITWNRRIMLEVAVPESDPHIPSLNAVYPTTDWHERETYDF 175
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+GI F+ HP L RI ++GHP RKD+P+ G V + Y
Sbjct: 176 FGIIFDDHPALTRIQMPDDWDGHPQRKDYPLGG-VPVEY 213
>gi|312139311|ref|YP_004006647.1| NADH dehydrogenase (quinone) chain c nuoc [Rhodococcus equi 103S]
gi|311888650|emb|CBH47962.1| NADH dehydrogenase (quinone) chain C NuoC [Rhodococcus equi 103S]
Length = 251
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ D D + F ++ V EL+L V L + LRDDP F + + G
Sbjct: 80 DALADALDTVGVLFDDAIEKVVVFRRELTLHVRREYLPTAARRLRDDPALRFELCLGVSG 139
Query: 63 VDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + VY +S + RR+R+++AV + +PS+ G+YP DW ERE +D +
Sbjct: 140 VHYPQDPGRELHGVYPLMSVTHGRRVRLEVAVPDADPHIPSLYGVYPTTDWHERETYDFF 199
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
GI F+GHP L RI + GHP RKD+P+ G
Sbjct: 200 GIVFDGHPALTRIEMPDDWTGHPQRKDYPLGG 231
>gi|312890394|ref|ZP_07749931.1| NADH dehydrogenase subunit C [Mucilaginibacter paludis DSM 18603]
gi|311297164|gb|EFQ74296.1| NADH dehydrogenase subunit C [Mucilaginibacter paludis DSM 18603]
Length = 165
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E+L + + F V+ G L+ + L+ + ++L+ F+++ D+ + +
Sbjct: 7 EELLQKLSSKFDDQVKSVTEPYGLLTFETGREQLIEVLTYLK--TELQFIHLTDITAIHY 64
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
F V+YH S R+R+K+ +A + +P+ ++ GA+W ERE +D +GI F
Sbjct: 65 PELEKPFGVIYHLHSLVNGIRVRIKVFLAVDDVHIPTATNLWNGANWMERETYDFFGIIF 124
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFV 154
+GHPDLRRIL P+RK++P+
Sbjct: 125 DGHPDLRRILNVDDMTAFPMRKEYPLEDPN 154
>gi|153004154|ref|YP_001378479.1| NADH (or F420H2) dehydrogenase subunit C [Anaeromyxobacter sp.
Fw109-5]
gi|152027727|gb|ABS25495.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter sp.
Fw109-5]
Length = 190
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ D + F V + V +V +C+FLRD+P + DL
Sbjct: 1 MTTT--EIHDRLKARFGDDVGPLSEPKIDAFAVVTRERIVEVCTFLRDEPGLELDFLEDL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDM 119
+D+ ++N+ +VVYH LS ++ + +K+ + S V ++ A+WFEREV+D+
Sbjct: 59 TALDWP-KNNQIEVVYHLLSYRHRHSIVLKVQLDRAAPSISTVEGVWKTANWFEREVYDL 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+G+ F GHPDLRRI+ + GHPLRKD+ TG
Sbjct: 118 FGVTFAGHPDLRRIMLPDDWIGHPLRKDYQETG 150
>gi|297563969|ref|YP_003682942.1| NADH (or F420H2) dehydrogenase, subunit C [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296848418|gb|ADH70436.1| NADH (or F420H2) dehydrogenase, subunit C [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 246
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 6 EDLGDYIVNSFS---GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ + D + + G+V + GEL+ L L LRD+P + + + G
Sbjct: 75 DRVADDLEAALGEDAGAVERVEVARGELTFHTRREALPRLARLLRDEPALRYELCLGVTG 134
Query: 63 VDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V F VYHF S +N +RV + VPSIV +YP DW ERE WD +
Sbjct: 135 VHFPDDAGRELHAVYHFRSITHNSEIRVATTCPDADPHVPSIVSVYPTNDWHEREAWDFF 194
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVELH 157
GI F+GHP L RI + GHP RKD+P+ G VE
Sbjct: 195 GIVFDGHPALTRIQMPDDWHGHPQRKDYPLGGIPVEYR 232
>gi|94968342|ref|YP_590390.1| NADH (or F420H2) dehydrogenase, subunit C [Candidatus Koribacter
versatilis Ellin345]
gi|94550392|gb|ABF40316.1| NADH dehydrogenase subunit C [Candidatus Koribacter versatilis
Ellin345]
Length = 165
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 3 RKIED---LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+++D L + + S V ELS+ V LV LRD F + D
Sbjct: 11 EQLKDKPALAKLLASD-SIVVEQVKWDRDELSIWVSRESLVDAVKLLRDSSETQFTFLSD 69
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWD 118
+ D+ RF+V YHFLS R+R+K+ + + V S+ ++P ++FEREV+D
Sbjct: 70 VTCTDWYPSEPRFEVSYHFLSIPRKDRVRLKVKLLGDDAQVDSLFSVFPSCNFFEREVFD 129
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
++G+ F GHP+L RI+ ++GHPLRKD+PV G+
Sbjct: 130 LFGVRFHGHPNLARIMMPEDWKGHPLRKDYPVEGY 164
>gi|116624759|ref|YP_826915.1| NADH (or F420H2) dehydrogenase subunit C [Candidatus Solibacter
usitatus Ellin6076]
gi|116227921|gb|ABJ86630.1| NADH (or F420H2) dehydrogenase, subunit C [Candidatus Solibacter
usitatus Ellin6076]
Length = 168
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
DL + F + +G+ L ++ + +L+ F ++D+ VD+
Sbjct: 8 SDLARELKERFGEGISETSTYLGQNFLVARPDSVIPILEYLK--LEADFDYLVDVTAVDW 65
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
R+ RFD+VY S N R+RVK +A+G + VG++ A+W EREV+DM+GI F
Sbjct: 66 PKRAERFDLVYILYSFSRNERVRVKAFIADGYKPETAVGVHLTANWLEREVFDMFGIEFA 125
Query: 126 GHPDLRRILTDYGFEGHPLRKDF 148
GHPD+RRIL ++G+PLRKD+
Sbjct: 126 GHPDMRRILMPEEWQGYPLRKDY 148
>gi|157166936|gb|ABV25448.1| NADH dehydrogenase subunit 9 [Lychnis coronaria]
Length = 131
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKQRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|307169817|gb|EFN62343.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Camponotus floridanus]
Length = 87
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
M+GIFF HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD+ K+VV P+EL QE R
Sbjct: 1 MFGIFFLNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDEQKRVVIEPLELTQEFRK 60
Query: 179 YDFLSPWEGVNSLFAKEDSKDDMS 202
++ +PWE + + +S
Sbjct: 61 FELSAPWEQFPKFREAPPAAETIS 84
>gi|255708994|gb|ACU30402.1| NADH dehydrogenase subunit 9 [Silene khasiana]
Length = 131
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 85/118 (72%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
+ L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 LKLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|295837123|ref|ZP_06824056.1| NADH dehydrogenase I, C subunit [Streptomyces sp. SPB74]
gi|197697233|gb|EDY44166.1| NADH dehydrogenase I, C subunit [Streptomyces sp. SPB74]
Length = 283
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-FDVVYHFLS 80
V GEL+ V LV + LRDDP F + GV + +R VYH S
Sbjct: 131 KTVVDRGELTFHVAREHLVQVARTLRDDPALRFELCTGVSGVHYPGDKDRELHAVYHLRS 190
Query: 81 PKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+NR +RV+++V + + +PS+V +YP DW ERE +D +G+ F+GHP L RI+ +
Sbjct: 191 ITHNRLIRVEVSVPDADRHLPSLVALYPTNDWHERETYDFFGLIFDGHPALTRIMMPDDW 250
Query: 140 EGHPLRKDFPVTGFVELHYDDKV 162
+G P RKD+P+ G + + Y
Sbjct: 251 QGFPQRKDYPLGG-IPVEYKGAQ 272
>gi|197121691|ref|YP_002133642.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter sp. K]
gi|220916487|ref|YP_002491791.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter
dehalogenans 2CP-1]
gi|196171540|gb|ACG72513.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter sp. K]
gi|219954341|gb|ACL64725.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 175
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 66/155 (42%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + + +V F +V G+ V+ +V +C FL++DP F
Sbjct: 1 MSKA---VIAALVERFPDAVHAPYEGVGGDDCAFVERSRIVDVCRFLKEDPSLAFNMSPY 57
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS--VPSIVGIYPGADWFEREVW 117
+ VD+L S RF+VVY+ LS +N R+R+++ V EG VPS+ G++ GADWFER W
Sbjct: 58 ITAVDYLGASPRFEVVYNLLSTVHNTRVRLRVKVPEGPEGVVPSVTGLWRGADWFERYCW 117
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
DMYGI F GHPD+RR+L FEGHPLRKD+P+ G
Sbjct: 118 DMYGIPFSGHPDMRRLLMYDEFEGHPLRKDYPLRG 152
>gi|225871984|ref|YP_002753438.1| NADH dehydrogenase I, C subunit [Acidobacterium capsulatum ATCC
51196]
gi|225793999|gb|ACO34089.1| NADH dehydrogenase I, C subunit [Acidobacterium capsulatum ATCC
51196]
Length = 159
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ ++ G + A EL+L + + C +R + D VD+
Sbjct: 17 QALESAAPGVITGAKYDRNELTLTIARDSIRRACEIVR---AAGYNFFSDCTCVDWYPSE 73
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
RF V YH LS + +R+R+ + V V SI I+P A+++EREVWD++G+ F GHP
Sbjct: 74 PRFQVTYHLLSHRLKQRVRLCVMVDSSDPSVESITSIWPAANYYEREVWDLFGVRFHGHP 133
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGF 153
DLRRI+ +EGHPL+K +PV G+
Sbjct: 134 DLRRIMMPEEWEGHPLQKTYPVEGY 158
>gi|118340563|gb|ABK80613.1| putative proton-translocating NADH dehydrogenase I chain C
[uncultured marine Nitrospinaceae bacterium]
Length = 161
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 65/152 (42%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K + + I ++ +V + + G+ ++ + FLRDD F+ ++D+
Sbjct: 1 MSDK--KIIERIKEQYASAVIDSHDFRGDQTVTMKKDCGNEFFQFLRDDSELAFIFLMDI 58
Query: 61 CGVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWD 118
VD+LS+ RF+VVYHF S KYN RLRVKI V E SI + A+W+ERE+WD
Sbjct: 59 TAVDYLSKKDERFEVVYHFYSLKYNHRLRVKIPVAEEDCVAESITPFWKTANWYEREIWD 118
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
MYGI F HP+LRRIL F+GHPLRKD+P+
Sbjct: 119 MYGIKFRNHPNLRRILMYEEFKGHPLRKDYPI 150
>gi|255708928|gb|ACU30369.1| NADH dehydrogenase subunit 9 [Agrostemma githago]
Length = 131
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 83/118 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTCADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255708940|gb|ACU30375.1| NADH dehydrogenase subunit 9 [Silene acutifolia]
gi|255708972|gb|ACU30391.1| NADH dehydrogenase subunit 9 [Silene dichotoma]
gi|255708990|gb|ACU30400.1| NADH dehydrogenase subunit 9 [Silene integripetala]
gi|255709012|gb|ACU30411.1| NADH dehydrogenase subunit 9 [Silene nana]
gi|255709018|gb|ACU30414.1| NADH dehydrogenase subunit 9 [Silene odontopetala]
gi|255709028|gb|ACU30419.1| NADH dehydrogenase subunit 9 [Silene pygmaea]
gi|255709030|gb|ACU30420.1| NADH dehydrogenase subunit 9 [Silene repens]
Length = 131
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FKLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|262197696|ref|YP_003268905.1| NADH (or F420H2) dehydrogenase, subunit C [Haliangium ochraceum DSM
14365]
gi|262081043|gb|ACY17012.1| NADH (or F420H2) dehydrogenase, subunit C [Haliangium ochraceum DSM
14365]
Length = 163
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + F ++ + G+ V LV + +LRDDP F + + +D L
Sbjct: 7 DALTKKFGDAIEATSSDCGDEVAVVKREKLVEVAQWLRDDPAMAFDSPVFCTCIDNLGEE 66
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHP 128
RF+V Y S K R+R+K+ +AE V ++PG DW ERE +DMYGI F+ H
Sbjct: 67 PRFEVCYQLRSMKLRHRIRLKVRLAEEDPVCPTLTKLWPGFDWQERETYDMYGIEFKDHH 126
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
DLRRI F G+PLRKD+P
Sbjct: 127 DLRRIYMYEEFVGYPLRKDYP 147
>gi|302035621|ref|YP_003795943.1| NADH-quinone oxidoreductase subunit C [Candidatus Nitrospira
defluvii]
gi|300603685|emb|CBK40016.1| NADH-quinone oxidoreductase, subunit C [Candidatus Nitrospira
defluvii]
Length = 165
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ L I ++F G V G++S+ V L + FL DDP F I+ + VD
Sbjct: 1 MSQLAKRIEDTFPGVCTKVVEWRGDVSVTVKREALHDIGKFLHDDPAMRFDYIVHVSSVD 60
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIF 123
+ RF+VVY S + +R+R+K V E V S+ I+ GAD+ EREV+DM GI
Sbjct: 61 WPDDEERFEVVYEVYSIRTRQRIRLKTRVPESDCIVDSLTDIWKGADFMEREVYDMMGIR 120
Query: 124 FEGHPDLRRILTDYGF-EGHPLRKDFPVTG 152
F HPDLRRIL + EG+PLRKDFP+ G
Sbjct: 121 FRNHPDLRRILMPDEYEEGYPLRKDFPLRG 150
>gi|332662315|ref|YP_004445103.1| NAD(P)H-quinone oxidoreductase subunit J [Haliscomenobacter
hydrossis DSM 1100]
gi|332331129|gb|AEE48230.1| NAD(P)H-quinone oxidoreductase subunit J [Haliscomenobacter
hydrossis DSM 1100]
Length = 170
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + F G + G LSL+V + + + +L++D F+ + DLCGV F
Sbjct: 11 IVEKLSTQFPGKILSQEEPYGLLSLNVPRENAIEIIKWLKEDTELQFIFMTDLCGVHFPE 70
Query: 68 R-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFE 125
+ V+YH S +N RLR++ V ++ A+W ERE +D +GI F
Sbjct: 71 QTGFELGVIYHLHSLIHNIRLRLRTFFPANDPVVPTATTVFRAANWMERETFDFFGIRFS 130
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
GHPDLRRIL HPL K +P+ D + K
Sbjct: 131 GHPDLRRILNVDDMTYHPLLKQYPLEDDT--RTDKEDK 166
>gi|289425651|ref|ZP_06427423.1| NADH dehydrogenase, C subunit [Propionibacterium acnes SK187]
gi|289153952|gb|EFD02645.1| NADH dehydrogenase, C subunit [Propionibacterium acnes SK187]
gi|313763286|gb|EFS34650.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL013PA1]
gi|313814974|gb|EFS52688.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL059PA1]
gi|313829368|gb|EFS67082.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL063PA2]
gi|314916740|gb|EFS80571.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL005PA4]
gi|314919134|gb|EFS82965.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL050PA1]
gi|314921214|gb|EFS85045.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL050PA3]
gi|314930358|gb|EFS94189.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL067PA1]
gi|314956141|gb|EFT00537.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL027PA1]
gi|314959674|gb|EFT03776.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL002PA1]
gi|314969781|gb|EFT13879.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL037PA1]
gi|315098102|gb|EFT70078.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL059PA2]
gi|315108822|gb|EFT80798.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL030PA2]
gi|327451633|gb|EGE98287.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL087PA3]
gi|327452286|gb|EGE98940.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL083PA2]
gi|328752119|gb|EGF65735.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL025PA2]
gi|328757011|gb|EGF70627.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL087PA1]
Length = 274
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGLTVVDRGEITFFVRPEKLLELVKVLRDDDALRFESCTSLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY+ LS +NRR+R+ + V VPS+V +YP
Sbjct: 150 YPHMAGREMHVVYNLLSMTHNRRIRLEVALADPGQEDVARTGRSDVDSLPHVPSVVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ADW ERE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HADWQEREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|313836202|gb|EFS73916.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL037PA2]
gi|314927637|gb|EFS91468.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL044PA1]
gi|314971364|gb|EFT15462.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL037PA3]
gi|328906301|gb|EGG26076.1| NADH dehydrogenase subunit C [Propionibacterium sp. P08]
Length = 274
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGLTVVDRGEITFFVRPEKLLELVKVLRDDEALRFESCSCLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY LS +NRR+R+ V VPSIV +YP
Sbjct: 150 YPKMTGREMHVVYDLLSMTHNRRIRLEVALADPGQEDVARTGHSNVNLLPHVPSIVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
D+ ERE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HVDFQEREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|50843384|ref|YP_056611.1| NADH dehydrogenase subunit C [Propionibacterium acnes KPA171202]
gi|289426982|ref|ZP_06428701.1| NADH dehydrogenase, C subunit [Propionibacterium acnes J165]
gi|295131458|ref|YP_003582121.1| NADH dehydrogenase, C subunit [Propionibacterium acnes SK137]
gi|50840986|gb|AAT83653.1| NADH dehydrogenase I chain C [Propionibacterium acnes KPA171202]
gi|289159804|gb|EFD07989.1| NADH dehydrogenase, C subunit [Propionibacterium acnes J165]
gi|291376472|gb|ADE00327.1| NADH dehydrogenase, C subunit [Propionibacterium acnes SK137]
gi|313773332|gb|EFS39298.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL074PA1]
gi|313793606|gb|EFS41646.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL110PA1]
gi|313802883|gb|EFS44096.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL110PA2]
gi|313806329|gb|EFS44845.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL087PA2]
gi|313810765|gb|EFS48479.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL083PA1]
gi|313819440|gb|EFS57154.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL046PA2]
gi|313821246|gb|EFS58960.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL036PA1]
gi|313822299|gb|EFS60013.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL036PA2]
gi|313826143|gb|EFS63857.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL063PA1]
gi|313831076|gb|EFS68790.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL007PA1]
gi|313833206|gb|EFS70920.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL056PA1]
gi|313838151|gb|EFS75865.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL086PA1]
gi|314925992|gb|EFS89823.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL036PA3]
gi|314962248|gb|EFT06349.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL002PA2]
gi|314963238|gb|EFT07338.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL082PA1]
gi|314973940|gb|EFT18036.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL053PA1]
gi|314976868|gb|EFT20963.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL045PA1]
gi|314979333|gb|EFT23427.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL072PA2]
gi|314984990|gb|EFT29082.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL005PA1]
gi|314986336|gb|EFT30428.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL005PA2]
gi|314988568|gb|EFT32659.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL005PA3]
gi|315079685|gb|EFT51673.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL053PA2]
gi|315081013|gb|EFT52989.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL078PA1]
gi|315083924|gb|EFT55900.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL027PA2]
gi|315085061|gb|EFT57037.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL002PA3]
gi|315089490|gb|EFT61466.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL072PA1]
gi|315097691|gb|EFT69667.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL038PA1]
gi|315107940|gb|EFT79916.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL030PA1]
gi|327325711|gb|EGE67508.1| NADH dehydrogenase I, C subunit [Propionibacterium acnes HL096PA3]
gi|327330841|gb|EGE72586.1| NADH dehydrogenase I, C subunit [Propionibacterium acnes HL096PA2]
gi|327442866|gb|EGE89520.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL043PA2]
gi|327445258|gb|EGE91912.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL043PA1]
gi|327447756|gb|EGE94410.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL013PA2]
gi|327452503|gb|EGE99157.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL092PA1]
gi|328755063|gb|EGF68679.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL020PA1]
gi|328761547|gb|EGF75065.1| NADH dehydrogenase I, C subunit [Propionibacterium acnes HL099PA1]
gi|332676327|gb|AEE73143.1| NADH-quinone oxidoreductase subunit C [Propionibacterium acnes 266]
Length = 274
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGLTVVDRGEITFFVRPEKLLELVKVLRDDDALRFESCTSLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY+ LS +NRR+R+ + V VPS+V +YP
Sbjct: 150 YPHMAGREMHVVYNLLSMTHNRRIRLEVALADPGQEDVARTGRSDVDSLPHVPSVVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ADW ERE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HADWQEREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|86158990|ref|YP_465775.1| NADH (or F420H2) dehydrogenase subunit C [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85775501|gb|ABC82338.1| NADH dehydrogenase subunit C [Anaeromyxobacter dehalogenans 2CP-C]
Length = 175
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + + +V F +V G+ V+ +V +C FL+++P F
Sbjct: 1 MSKA---VIAALVERFPDAVHAPYEGVGGDDCAFVERSRIVDVCRFLKEEPSLAFNMAPY 57
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS--VPSIVGIYPGADWFEREVW 117
+ VD+L + RF+VVY+ LS +N+R+R+++ V EG VPS+ G++ GADWFER W
Sbjct: 58 ITAVDYLGATPRFEVVYNLLSTVHNKRVRLRVKVPEGPEGVVPSVTGLWRGADWFERYCW 117
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
DMYGI F GHPD+RR+L FEGHPLRKD+P+ G
Sbjct: 118 DMYGIPFSGHPDMRRLLMYDEFEGHPLRKDYPLRG 152
>gi|258651218|ref|YP_003200374.1| NADH dehydrogenase subunit C [Nakamurella multipartita DSM 44233]
gi|258554443|gb|ACV77385.1| NADH (or F420H2) dehydrogenase, subunit C [Nakamurella multipartita
DSM 44233]
Length = 275
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-RSNRFDVVYH 77
++ + GE++ + L + +RDD F + GVD+ R VVY
Sbjct: 120 ALLQTTVANGEITFYIHRDFLTVMLWAIRDDESLRFELASSISGVDYGEGVPKRLHVVYE 179
Query: 78 FLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
S Y RR+R+++AV VPS V +YP ADW ERE+WDM+GI F GHP L RIL
Sbjct: 180 LTSMTYRRRIRLEVAVDVDDAHVPSAVAVYPTADWHEREIWDMFGIVFSGHPGLTRILMP 239
Query: 137 YGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
+ GHP RKD+P+ G + + Y ++
Sbjct: 240 DDWLGHPQRKDYPLGG-IPVEYKGAEIAAPDQRR 272
>gi|15610283|ref|NP_217663.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis H37Rv]
gi|31794323|ref|NP_856816.1| NADH dehydrogenase subunit C [Mycobacterium bovis AF2122/97]
gi|121639030|ref|YP_979254.1| NADH dehydrogenase subunit C [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663002|ref|YP_001284525.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis H37Ra]
gi|148824341|ref|YP_001289095.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis F11]
gi|215405145|ref|ZP_03417326.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis 02_1987]
gi|215413014|ref|ZP_03421715.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis 94_M4241A]
gi|215432106|ref|ZP_03430025.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis EAS054]
gi|215447437|ref|ZP_03434189.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis T85]
gi|218754927|ref|ZP_03533723.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis GM 1503]
gi|219559193|ref|ZP_03538269.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis T17]
gi|224991522|ref|YP_002646211.1| NADH dehydrogenase subunit C [Mycobacterium bovis BCG str. Tokyo
172]
gi|253800181|ref|YP_003033182.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis KZN
1435]
gi|254365772|ref|ZP_04981817.1| NADH dehydrogenase I (chain C) nuoC (NADH-ubiquinone oxidoreductase
chain C) [Mycobacterium tuberculosis str. Haarlem]
gi|254552238|ref|ZP_05142685.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260188188|ref|ZP_05765662.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis CPHL_A]
gi|260202293|ref|ZP_05769784.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis T46]
gi|260206486|ref|ZP_05773977.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis K85]
gi|289444711|ref|ZP_06434455.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
T46]
gi|289448827|ref|ZP_06438571.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
CPHL_A]
gi|289555420|ref|ZP_06444630.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis KZN
605]
gi|289571358|ref|ZP_06451585.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
T17]
gi|289575859|ref|ZP_06456086.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
K85]
gi|289746956|ref|ZP_06506334.1| NADH-quinone oxidoreductase subunit C [Mycobacterium tuberculosis
02_1987]
gi|289755266|ref|ZP_06514644.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis EAS054]
gi|289759277|ref|ZP_06518655.1| NADH dehydrogenase subunit I [Mycobacterium tuberculosis T85]
gi|289763330|ref|ZP_06522708.1| NADH dehydrogenase I (chain C) nuoC (NADH-ubiquinone oxidoreductase
chain C) [Mycobacterium tuberculosis GM 1503]
gi|294993126|ref|ZP_06798817.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis 210]
gi|297635790|ref|ZP_06953570.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis KZN 4207]
gi|297732787|ref|ZP_06961905.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis KZN R506]
gi|298526621|ref|ZP_07014030.1| NADH-quinone oxidoreductase subunit C [Mycobacterium tuberculosis
94_M4241A]
gi|306777464|ref|ZP_07415801.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu001]
gi|306782190|ref|ZP_07420527.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu002]
gi|306786010|ref|ZP_07424332.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu003]
gi|306790375|ref|ZP_07428697.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu004]
gi|306794901|ref|ZP_07433203.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu005]
gi|306799100|ref|ZP_07437402.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu006]
gi|306804944|ref|ZP_07441612.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu008]
gi|306809133|ref|ZP_07445801.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu007]
gi|306969235|ref|ZP_07481896.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu009]
gi|306973582|ref|ZP_07486243.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu010]
gi|307081291|ref|ZP_07490461.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu011]
gi|307085893|ref|ZP_07495006.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu012]
gi|313660120|ref|ZP_07817000.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis KZN V2475]
gi|54037920|sp|P65572|NUOC_MYCBO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|54041671|sp|P65571|NUOC_MYCTU RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534302|sp|A1KNE3|NUOC_MYCBP RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|218534304|sp|A5U7G3|NUOC_MYCTA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|254767812|sp|C1AGR4|NUOC_MYCBT RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|1781221|emb|CAB06269.1| PROBABLE NADH DEHYDROGENASE I (CHAIN C) NUOC (NADH-UBIQUINONE
OXIDOREDUCTASE CHAIN C) [Mycobacterium tuberculosis
H37Rv]
gi|31619919|emb|CAD95263.1| PROBABLE NADH DEHYDROGENASE I (CHAIN C) NUOC (NADH-UBIQUINONE
OXIDOREDUCTASE CHAIN C) [Mycobacterium bovis AF2122/97]
gi|121494678|emb|CAL73159.1| Probable NADH dehydrogenase I (chain C) nuoC [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134151285|gb|EBA43330.1| NADH dehydrogenase I (chain C) nuoC (NADH-ubiquinone oxidoreductase
chain C) [Mycobacterium tuberculosis str. Haarlem]
gi|148507154|gb|ABQ74963.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis H37Ra]
gi|148722868|gb|ABR07493.1| NADH dehydrogenase I chain C nuoC (NADH-ubiquinone oxidoreductase
chain C) [Mycobacterium tuberculosis F11]
gi|224774637|dbj|BAH27443.1| NADH dehydrogenase subunit C [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321684|gb|ACT26287.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis KZN
1435]
gi|289417630|gb|EFD14870.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
T46]
gi|289421785|gb|EFD18986.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
CPHL_A]
gi|289440052|gb|EFD22545.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis KZN
605]
gi|289540290|gb|EFD44868.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
K85]
gi|289545112|gb|EFD48760.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
T17]
gi|289687484|gb|EFD54972.1| NADH-quinone oxidoreductase subunit C [Mycobacterium tuberculosis
02_1987]
gi|289695853|gb|EFD63282.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis EAS054]
gi|289710836|gb|EFD74852.1| NADH dehydrogenase I (chain C) nuoC (NADH-ubiquinone oxidoreductase
chain C) [Mycobacterium tuberculosis GM 1503]
gi|289714841|gb|EFD78853.1| NADH dehydrogenase subunit I [Mycobacterium tuberculosis T85]
gi|298496415|gb|EFI31709.1| NADH-quinone oxidoreductase subunit C [Mycobacterium tuberculosis
94_M4241A]
gi|308214176|gb|EFO73575.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu001]
gi|308324951|gb|EFP13802.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu002]
gi|308329367|gb|EFP18218.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu003]
gi|308333196|gb|EFP22047.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu004]
gi|308336687|gb|EFP25538.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu005]
gi|308340527|gb|EFP29378.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu006]
gi|308344467|gb|EFP33318.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu007]
gi|308348463|gb|EFP37314.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu008]
gi|308353093|gb|EFP41944.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu009]
gi|308357066|gb|EFP45917.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu010]
gi|308361020|gb|EFP49871.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu011]
gi|308364628|gb|EFP53479.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
SUMu012]
gi|323718235|gb|EGB27415.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
CDC1551A]
gi|326902629|gb|EGE49562.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
W-148]
gi|328459918|gb|AEB05341.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis KZN
4207]
Length = 236
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 6 EDLGDYIVN-------SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+D+ D + F +V V EL+L V L + LRD+P F +
Sbjct: 61 DDIVDRLAEALRHERVEFEDAVEKVVVYRDELTLHVRRDLLPRVAQRLRDEPELRFELCL 120
Query: 59 DLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + VY S +NRRLR++++ + +PS+ IYP DW ERE
Sbjct: 121 GVSGVHYPHETGRELHAVYPLQSITHNRRLRLEVSAPDSDPHIPSLFAIYPTNDWHERET 180
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+D +GI F+GHP L RI ++GHP RKD+P+ G
Sbjct: 181 YDFFGIIFDGHPALTRIEMPDDWQGHPQRKDYPLGG 216
>gi|133854266|gb|ABO39168.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854270|gb|ABO39170.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854280|gb|ABO39175.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854284|gb|ABO39177.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854294|gb|ABO39182.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854300|gb|ABO39185.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854306|gb|ABO39188.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166850|gb|ABV25405.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166858|gb|ABV25409.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166874|gb|ABV25417.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166878|gb|ABV25419.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166880|gb|ABV25420.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166882|gb|ABV25421.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166884|gb|ABV25422.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166886|gb|ABV25423.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166888|gb|ABV25424.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166890|gb|ABV25425.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166892|gb|ABV25426.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166894|gb|ABV25427.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166896|gb|ABV25428.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166898|gb|ABV25429.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166900|gb|ABV25430.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166902|gb|ABV25431.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166904|gb|ABV25432.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166906|gb|ABV25433.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166908|gb|ABV25434.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166910|gb|ABV25435.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166912|gb|ABV25436.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166914|gb|ABV25437.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166920|gb|ABV25440.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166922|gb|ABV25441.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166924|gb|ABV25442.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166926|gb|ABV25443.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|157166928|gb|ABV25444.1| NADH dehydrogenase subunit 9 [Silene latifolia]
gi|255708930|gb|ACU30370.1| NADH dehydrogenase subunit 9 [Atocion lerchenfeldianum]
gi|255708932|gb|ACU30371.1| NADH dehydrogenase subunit 9 [Eudianthe laeta]
gi|255708942|gb|ACU30376.1| NADH dehydrogenase subunit 9 [Silene akinfievii]
gi|255708966|gb|ACU30388.1| NADH dehydrogenase subunit 9 [Silene cordifolia]
gi|255708970|gb|ACU30390.1| NADH dehydrogenase subunit 9 [Silene delicatula]
gi|255708986|gb|ACU30398.1| NADH dehydrogenase subunit 9 [Silene hookeri]
gi|255709000|gb|ACU30405.1| NADH dehydrogenase subunit 9 [Silene littorea]
gi|255709004|gb|ACU30407.1| NADH dehydrogenase subunit 9 [Silene menziesii]
gi|255709026|gb|ACU30418.1| NADH dehydrogenase subunit 9 [Silene pendula]
gi|255709044|gb|ACU30427.1| NADH dehydrogenase subunit 9 [Silene sordida]
gi|255709060|gb|ACU30435.1| NADH dehydrogenase subunit 9 [Silene zawadskii]
gi|255709062|gb|ACU30436.1| NADH dehydrogenase subunit 9 [Viscaria alpina]
gi|255709064|gb|ACU30437.1| NADH dehydrogenase subunit 9 [Viscaria vulgaris]
Length = 131
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|333025117|ref|ZP_08453181.1| putative NADH dehydrogenase subunit C [Streptomyces sp. Tu6071]
gi|332744969|gb|EGJ75410.1| putative NADH dehydrogenase subunit C [Streptomyces sp. Tu6071]
Length = 227
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-FDVVYHFLS 80
V GEL+ V+ LV + LRDDP F + GV + R VYH S
Sbjct: 75 KTVVDRGELTFHVEREHLVQVARTLRDDPALRFELCTGVSGVHYPGDKGRELHAVYHLRS 134
Query: 81 PKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+NR +RV+++V + + +PS+V +YP DW ERE +D +G+ F+GHP L RI+ +
Sbjct: 135 ITHNRLIRVEVSVPDADRHLPSLVALYPTNDWHERETYDFFGLIFDGHPALTRIMMPDDW 194
Query: 140 EGHPLRKDFPVTGFVELHYDDKV 162
+G P RKD+P+ G + + Y
Sbjct: 195 QGFPQRKDYPLGG-IPVEYKGAQ 216
>gi|133854260|gb|ABO39165.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854262|gb|ABO39166.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854264|gb|ABO39167.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854268|gb|ABO39169.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854272|gb|ABO39171.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854274|gb|ABO39172.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854276|gb|ABO39173.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854278|gb|ABO39174.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854282|gb|ABO39176.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854286|gb|ABO39178.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854288|gb|ABO39179.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854290|gb|ABO39180.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854292|gb|ABO39181.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854296|gb|ABO39183.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854298|gb|ABO39184.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854302|gb|ABO39186.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854304|gb|ABO39187.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|133854308|gb|ABO39189.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166844|gb|ABV25402.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166846|gb|ABV25403.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166848|gb|ABV25404.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166852|gb|ABV25406.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166854|gb|ABV25407.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166856|gb|ABV25408.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166860|gb|ABV25410.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166862|gb|ABV25411.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166864|gb|ABV25412.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166866|gb|ABV25413.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166868|gb|ABV25414.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166870|gb|ABV25415.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|157166872|gb|ABV25416.1| NADH dehydrogenase subunit 9 [Silene vulgaris]
gi|255708956|gb|ACU30383.1| NADH dehydrogenase subunit 9 [Silene caesia]
gi|255709054|gb|ACU30432.1| NADH dehydrogenase subunit 9 [Silene uniflora]
Length = 131
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F ++D+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLVDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255709034|gb|ACU30422.1| NADH dehydrogenase subunit 9 [Silene samia]
Length = 131
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FKFLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255708952|gb|ACU30381.1| NADH dehydrogenase subunit 9 [Silene auriculata]
Length = 131
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|157166876|gb|ABV25418.1| NADH dehydrogenase subunit 9 [Silene latifolia]
Length = 131
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFPVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|327333124|gb|EGE74851.1| NADH dehydrogenase I, C subunit [Propionibacterium acnes HL097PA1]
Length = 274
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGLTVVDRGEITFFVRPEKLLELVKVLRDDDALRFESCTSLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY+ LS +NRR+R+ + V VPS+V +YP
Sbjct: 150 YPHMAGREVHVVYNLLSMTHNRRIRLEVALADPGQEDVARTGRSDVDSLPHVPSVVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ADW ERE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HADWQEREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|157166918|gb|ABV25439.1| NADH dehydrogenase subunit 9 [Silene latifolia]
Length = 131
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTKFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|289751825|ref|ZP_06511203.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
T92]
gi|289692412|gb|EFD59841.1| NADH dehydrogenase subunit I C nuoC [Mycobacterium tuberculosis
T92]
Length = 238
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 6 EDLGDYIVN-------SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+D+ D + F +V V EL+L V L + LRD+P F +
Sbjct: 63 DDIVDRLAEALRHERVEFEDAVEKVVVYRDELTLHVRRDLLPRVAQRLRDEPELRFELCL 122
Query: 59 DLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + VY S +NRRLR++++ + +PS+ IYP DW ERE
Sbjct: 123 GVSGVHYPHETGRELHAVYPLQSITHNRRLRLEVSAPDSDPHIPSLFAIYPTNDWHERET 182
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+D +GI F+GHP L RI ++GHP RKD+P+ G
Sbjct: 183 YDFFGIIFDGHPALTRIEMPDDWQGHPQRKDYPLGG 218
>gi|301061312|ref|ZP_07202094.1| NADH dehydrogenase, C subunit [delta proteobacterium NaphS2]
gi|300444631|gb|EFK08614.1| NADH dehydrogenase, C subunit [delta proteobacterium NaphS2]
Length = 484
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV-- 63
+ L + F ++ + + V+ L + FL+ + F + DL +
Sbjct: 226 KSLSRSLTERFGEHIKEIRHPSDMPTFQVEESSLTDVLRFLKSEATQRFQRLDDLTAIDE 285
Query: 64 ---DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDM 119
S + +VYH LS + R+R+K+ + ++ I+P A+W+EREV+D+
Sbjct: 286 SARQDRSNYPDYTLVYHLLSYESASRIRLKVPLKGETPTARTVTDIWPSANWYEREVFDL 345
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+GI FEGHP+LRR+L +EG PLRKDF
Sbjct: 346 FGIRFEGHPNLRRLLMPPAWEGFPLRKDF 374
>gi|15842723|ref|NP_337760.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis CDC1551]
gi|167970181|ref|ZP_02552458.1| NADH dehydrogenase subunit C [Mycobacterium tuberculosis H37Ra]
gi|13883045|gb|AAK47574.1| NADH dehydrogenase I, C subunit [Mycobacterium tuberculosis
CDC1551]
Length = 210
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 6 EDLGDYIVN-------SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+D+ D + F +V V EL+L V L + LRD+P F +
Sbjct: 35 DDIVDRLAEALRHERVEFEDAVEKVVVYRDELTLHVRRDLLPRVAQRLRDEPELRFELCL 94
Query: 59 DLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
+ GV + VY S +NRRLR++++ + +PS+ IYP DW ERE
Sbjct: 95 GVSGVHYPHETGRELHAVYPLQSITHNRRLRLEVSAPDSDPHIPSLFAIYPTNDWHERET 154
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+D +GI F+GHP L RI ++GHP RKD+P+ G
Sbjct: 155 YDFFGIIFDGHPALTRIEMPDDWQGHPQRKDYPLGG 190
>gi|255708996|gb|ACU30403.1| NADH dehydrogenase subunit 9 [Silene lacera]
Length = 131
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQFLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|223937078|ref|ZP_03628986.1| NADH (or F420H2) dehydrogenase, subunit C [bacterium Ellin514]
gi|223894359|gb|EEF60812.1| NADH (or F420H2) dehydrogenase, subunit C [bacterium Ellin514]
Length = 223
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ +E L + F + GE+++ + D + +C+ + F ++DL
Sbjct: 1 MSSLE-LAQQLKAKFGDLISDPAEFRGEVTIKIGDAERIAEVCAVAK--KELGFDYLVDL 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDM 119
VD R+ +VY ++ LR+K V+E K +P+I ++ A+W ERE++DM
Sbjct: 58 SSVDNYGNDPRWTLVYELYGYGHHCHLRLKTDVSEEKSELPTISTVWRTANWHEREIYDM 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVEL 156
GI F GHPDLRRIL G+ PLRKDFP+ G E+
Sbjct: 118 MGIRFSGHPDLRRILMWEGYPYFPLRKDFPLAGKPSEM 155
>gi|255708950|gb|ACU30380.1| NADH dehydrogenase subunit 9 [Silene armena]
gi|255708958|gb|ACU30384.1| NADH dehydrogenase subunit 9 [Silene caryophylloides]
Length = 131
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FKLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255708960|gb|ACU30385.1| NADH dehydrogenase subunit 9 [Silene ciliata]
Length = 131
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 83/118 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPAVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255708936|gb|ACU30373.1| NADH dehydrogenase subunit 9 [Petrocoptis pyrenaica]
Length = 131
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255708954|gb|ACU30382.1| NADH dehydrogenase subunit 9 [Silene bellidifolia]
gi|255708980|gb|ACU30395.1| NADH dehydrogenase subunit 9 [Silene gallica]
gi|255708988|gb|ACU30399.1| NADH dehydrogenase subunit 9 [Silene imbricata]
Length = 131
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR+ RF+VVY+ LS +YN R+RV+ E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRNLRFEVVYNLLSTRYNSRIRVQTGADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|124515814|gb|EAY57323.1| NADH dehydrogenase (quinone), chain C [Leptospirillum rubarum]
Length = 184
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + + FSG+ + S+G+LS+ + + + + L D+P + I+D+ VD
Sbjct: 1 MHPVAESLEKRFSGTFLGSRESLGDLSVYIRPENALDVFRALHDEPEYDYDYIVDVTSVD 60
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIF 123
+ RF+VVY S R+ VKI V E V +VGI+ GA++ EREV+DM GI
Sbjct: 61 YPMDPERFEVVYILYSISRRHRVMVKIRVTEDSPVVDSVVGIWKGAEFMEREVYDMMGIQ 120
Query: 124 FEGHPDLRRILTDYGF-EGHPLRKDFPVTG 152
F GHPDLRRIL + EG PLRKDFP+ G
Sbjct: 121 FRGHPDLRRILMPDDYEEGFPLRKDFPLVG 150
>gi|255708946|gb|ACU30378.1| NADH dehydrogenase subunit 9 [Silene antirrhina]
Length = 131
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 85/118 (72%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
+ L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 LQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255709048|gb|ACU30429.1| NADH dehydrogenase subunit 9 [Silene succulenta]
Length = 131
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 85/118 (72%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR+ RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRNLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|133854345|gb|ABO39195.1| NADH dehydrogenase subunit 9 [Silene paradoxa]
gi|157166934|gb|ABV25447.1| NADH dehydrogenase subunit 9 [Silene stellata]
gi|255708938|gb|ACU30374.1| NADH dehydrogenase subunit 9 [Silene acaulis]
gi|255708948|gb|ACU30379.1| NADH dehydrogenase subunit 9 [Silene argentina]
gi|255708968|gb|ACU30389.1| NADH dehydrogenase subunit 9 [Silene davidii]
gi|255708974|gb|ACU30392.1| NADH dehydrogenase subunit 9 [Silene douglasii]
gi|255708978|gb|ACU30394.1| NADH dehydrogenase subunit 9 [Silene fruticosa]
gi|255708982|gb|ACU30396.1| NADH dehydrogenase subunit 9 [Silene gallinyi]
gi|255708992|gb|ACU30401.1| NADH dehydrogenase subunit 9 [Silene involucrata]
gi|255708998|gb|ACU30404.1| NADH dehydrogenase subunit 9 [Silene laciniata]
gi|255709006|gb|ACU30408.1| NADH dehydrogenase subunit 9 [Silene moorcroftiana]
gi|255709022|gb|ACU30416.1| NADH dehydrogenase subunit 9 [Silene paradoxa]
gi|255709032|gb|ACU30421.1| NADH dehydrogenase subunit 9 [Silene sachalinensis]
gi|255709036|gb|ACU30423.1| NADH dehydrogenase subunit 9 [Silene samojedorum]
gi|255709046|gb|ACU30428.1| NADH dehydrogenase subunit 9 [Silene sorensenis]
gi|255709050|gb|ACU30430.1| NADH dehydrogenase subunit 9 [Silene tunicoides]
gi|255709056|gb|ACU30433.1| NADH dehydrogenase subunit 9 [Silene vittata]
Length = 131
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|77917822|ref|YP_355637.1| trifunctional NADH dehydrogenase I subunit B/C/D [Pelobacter
carbinolicus DSM 2380]
gi|123575097|sp|Q3A825|NUBCD_PELCD RecName: Full=NADH-quinone oxidoreductase subunit B/C/D; AltName:
Full=NADH dehydrogenase I subunit B/C/D; AltName:
Full=NDH-1 subunit B/C/D
gi|77543905|gb|ABA87467.1| NADH dehydrogenase subunit B / NADH dehydrogenase subunit D / NADH
dehydrogenase subunit C [Pelobacter carbinolicus DSM
2380]
Length = 794
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + + F VR +L D + L FL+ D + + DL +D +
Sbjct: 228 LLEQLRERFGDDVRQ-EEGADMPTLVADPAQVPELLRFLKQDIDQPYERLEDLTAIDETA 286
Query: 68 RSNR----FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
RS R +VYH LS + LRVK + + VPSI G++P A+W+ERE +DM+G+
Sbjct: 287 RSQRPAHDLTMVYHLLSFERAGYLRVKAPLRNDRAEVPSITGLWPAANWYEREAFDMFGV 346
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F GHPDLRRIL G++GHPLRK P
Sbjct: 347 RFAGHPDLRRILMPEGWQGHPLRKSHP 373
>gi|171910633|ref|ZP_02926103.1| NuoC2 NADH I CHAIN C [Verrucomicrobium spinosum DSM 4136]
Length = 191
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ +V F V GE SL V L + RD F +ID+ VD
Sbjct: 4 SQIVKALVEKFGSQVTGNTEFRGETSLTVTLESLKPFLRYCRD--EMGFDYLIDVSSVDH 61
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
RF++VY S ++ LRVK + E + P++ ++ A+W EREV+DM GI F+
Sbjct: 62 FETDPRFEMVYELYSLSHHHHLRVKSLLTEEQEAPTVSDLWATAEWHEREVFDMMGIRFD 121
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTG 152
GHPDLRRIL G+ +PLRK+FP+ G
Sbjct: 122 GHPDLRRILMWEGYPFYPLRKEFPLAG 148
>gi|255709038|gb|ACU30424.1| NADH dehydrogenase subunit 9 [Silene schafta]
Length = 131
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ R RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FKLLCFLKLHTYTRFQVLIDICGVDYPYRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|255709014|gb|ACU30412.1| NADH dehydrogenase subunit 9 [Silene niceensis]
Length = 131
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR+ RF+VVY+ LS +YN R+ V+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRNLRFEVVYNLLSTRYNSRISVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|256831781|ref|YP_003160508.1| NADH (or F420H2) dehydrogenase, subunit C [Jonesia denitrificans
DSM 20603]
gi|256685312|gb|ACV08205.1| NADH (or F420H2) dehydrogenase, subunit C [Jonesia denitrificans
DSM 20603]
Length = 239
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 7 DLGDYIVNS--FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
D+ D I+ SG++ AV GEL+L + LV++ LRDD F + + GV
Sbjct: 70 DILDEIMAEHNISGAIESAVVDRGELTLFIAREHLVAVSQALRDDQDLRFELSLGVSGVH 129
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+ + VYH S + R LR+++A E V +YPG DW ERE +D +GI
Sbjct: 130 YPHDQGRELHAVYHLTSVTHGRSLRLEVAAPETDPTIPSTVSVYPGNDWHERETFDFFGI 189
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F G DL RI + GHP RKD+P+ G
Sbjct: 190 NFTGRDDLTRIEMPDDWPGHPQRKDYPLGG 219
>gi|297181762|gb|ADI17943.1| NADH:ubiquinone oxidoreductase 27 kd subunit [uncultured
Desulfobacterales bacterium HF0200_07G10]
Length = 161
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K + ++I +S + + + ++ V FLRD+ F ++D+
Sbjct: 1 MSEK--KIIEHIKEVYSSILIDNHDFRDDQTITVRKDCGNEFFKFLRDESELSFNFLMDI 58
Query: 61 CGVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWD 118
VD+LS+ RF+VVYHF S K+N RLRVKI V+ E S S+ ++ A+W+ERE+WD
Sbjct: 59 TAVDYLSKKDERFEVVYHFYSLKHNHRLRVKIPVSAEDCSTESVTPLWKTANWYEREIWD 118
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
MYGI F HP+LRRIL F+GHPLRKD+P+
Sbjct: 119 MYGIKFRNHPNLRRILLYEEFKGHPLRKDYPI 150
>gi|240169668|ref|ZP_04748327.1| NADH dehydrogenase subunit C [Mycobacterium kansasii ATCC 12478]
Length = 239
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 6 EDLGDYIVN-------SFSGSVRFAVN----SVGELSLDVDCGDLVSLCSFLRDDPHCCF 54
+D+ D + F ++ V EL+L V L + LRD+P F
Sbjct: 60 DDIADRLAEALHGEGVEFDDAIEKVVVYPQGEGAELTLHVRRERLPQVAQRLRDEPELRF 119
Query: 55 VNIIDLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWF 112
+ + GV + VY S +NRRLR++++V + +PS+ +YP DW
Sbjct: 120 EMCLGVNGVHYPHETGRELHAVYPLQSITHNRRLRLEVSVPDSDPHIPSLYSVYPTNDWH 179
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ERE +D +GI F+GHP L RI + GHP RKD+P+ G
Sbjct: 180 ERETYDFFGIVFDGHPSLTRIEMPDDWHGHPQRKDYPLGG 219
>gi|297570898|ref|YP_003696672.1| NADH (or F420H2) dehydrogenase, subunit C [Arcanobacterium
haemolyticum DSM 20595]
gi|296931245|gb|ADH92053.1| NADH (or F420H2) dehydrogenase, subunit C [Arcanobacterium
haemolyticum DSM 20595]
Length = 232
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-RSNRFDVVY 76
+ GEL + + LV + +LRDD F + + V + R Y
Sbjct: 76 DVIEKVTTQYGELVIFIKREHLVRVARYLRDDQDLRFELCLGVSAVHYPEDRGRELHGFY 135
Query: 77 HFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
F S +NR L + +A E +PSIV +YPG DW ERE WD+ GI F+GHP L R +
Sbjct: 136 TFFSITHNRSLSLDVAAPESDPHIPSIVSVYPGNDWPEREAWDLMGIVFDGHPGLTRSVM 195
Query: 136 DYGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 196 PDDWVGHPQRKDYPLGG 212
>gi|255709042|gb|ACU30426.1| NADH dehydrogenase subunit 9 [Silene seoulensis]
Length = 131
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 62/116 (53%), Positives = 84/116 (72%)
Query: 42 LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS 101
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 16 LLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRISP 75
Query: 102 IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 76 VVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|206602058|gb|EDZ38540.1| NADH dehydrogenase (quinone), chain C [Leptospirillum sp. Group II
'5-way CG']
Length = 184
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + + FSG+ + S+G+LS+ + + + + L D+P + I+D+ VD
Sbjct: 1 MHPVAESLEKRFSGTFLGSRESLGDLSVYIRPENALDVFRALHDEPEYDYDYIVDVTSVD 60
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIF 123
+ RF+VVY S R+ VKI V E V +VGI+ GA++ EREV+DM GI
Sbjct: 61 YPMDPERFEVVYILYSISRRHRVMVKIRVTEDAPVVDSVVGIWKGAEFMEREVYDMMGIQ 120
Query: 124 FEGHPDLRRILTDYGF-EGHPLRKDFPVTG 152
F GHPDLRRIL + EG PLRKDFP+ G
Sbjct: 121 FRGHPDLRRILMPDDYEEGFPLRKDFPLVG 150
>gi|269218339|ref|ZP_06162193.1| NADH dehydrogenase I, C subunit [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212198|gb|EEZ78538.1| NADH dehydrogenase I, C subunit [Actinomyces sp. oral taxon 848
str. F0332]
Length = 234
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDVVYH 77
++ V G+L L V LV + LRDD F + GV + +
Sbjct: 79 AIEKVVVENGQLVLFVAREHLVRVARCLRDDQDLRFEMCFGVTGVHYPQDAGRELHGYFP 138
Query: 78 FLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
S +NR L ++ E +PSIV +YPG DW ERE WD+ GI F+GHP L R
Sbjct: 139 LFSITHNRFLAIESTCPESDPHLPSIVEVYPGDDWPEREAWDLMGIVFDGHPGLTRTAMP 198
Query: 137 YGFEGHPLRKDFPVTG 152
+ GHP RKD+P+ G
Sbjct: 199 DDWIGHPQRKDYPLGG 214
>gi|157166930|gb|ABV25445.1| NADH dehydrogenase subunit 9 [Silene acaulis]
gi|255708984|gb|ACU30397.1| NADH dehydrogenase subunit 9 [Silene gracilicaulis]
gi|255709008|gb|ACU30409.1| NADH dehydrogenase subunit 9 [Silene multicaulis]
gi|255709016|gb|ACU30413.1| NADH dehydrogenase subunit 9 [Silene nutans]
gi|255709020|gb|ACU30415.1| NADH dehydrogenase subunit 9 [Silene otites]
gi|255709024|gb|ACU30417.1| NADH dehydrogenase subunit 9 [Silene paucifolia]
gi|255709040|gb|ACU30425.1| NADH dehydrogenase subunit 9 [Silene schwarzenbergii]
Length = 131
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|315093904|gb|EFT65880.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL060PA1]
Length = 274
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGLTVVDRGEITFFVRSEKLLELVEVLRDDDALRFESCTSLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY+ LS +NRR+R+ + V VPS+V +YP
Sbjct: 150 YPHMAGREMHVVYNLLSMTHNRRIRLEVALADPGQEDVARTGRSDVDSLPHVPSVVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ADW ERE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HADWQEREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|282855272|ref|ZP_06264604.1| NADH dehydrogenase, C subunit [Propionibacterium acnes J139]
gi|282581860|gb|EFB87245.1| NADH dehydrogenase, C subunit [Propionibacterium acnes J139]
gi|314923992|gb|EFS87823.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL001PA1]
gi|314965056|gb|EFT09155.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL082PA2]
gi|314983076|gb|EFT27168.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL110PA3]
gi|315090609|gb|EFT62585.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL110PA4]
gi|315104123|gb|EFT76099.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL050PA2]
gi|327325784|gb|EGE67576.1| NADH dehydrogenase I, C subunit [Propionibacterium acnes HL103PA1]
Length = 274
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGLTVVDRGEITFFVRSEKLLELVEVLRDDDALRFESCTSLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY+ LS +NRR+R+ + V VPS+V +YP
Sbjct: 150 YPHMAGREMHVVYNLLSMTHNRRIRLEVALADPGQEDVARTGRSDVDSLPHVPSVVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ADW ERE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HADWQEREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|111022874|ref|YP_705846.1| NADH dehydrogenase subunit C [Rhodococcus jostii RHA1]
gi|123480828|sp|Q0S448|NUOC_RHOSR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|110822404|gb|ABG97688.1| probable NADH dehydrogenase subunit C [Rhodococcus jostii RHA1]
Length = 240
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 8 LGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
LG + S F ++ V GE++ V L + LRD+P F + + GV
Sbjct: 71 LGAALAESGVGFEVAIESVVVFRGEVTFGVRREFLPLVARVLRDEPDLRFEMCLGVNGVH 130
Query: 65 FL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGI 122
F VY LS +NRR+R+++A + +PS+ +YP DW ERE +D +GI
Sbjct: 131 FPQDAGRELHAVYPLLSITHNRRIRLEVAAPDADPHIPSLYEVYPTNDWHERETYDFFGI 190
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F+GHP L RI + GHP RKD+P+ G
Sbjct: 191 VFDGHPSLTRIEMPDDWPGHPQRKDYPLGG 220
>gi|226227066|ref|YP_002761172.1| NADH-quinone oxidoreductase chain C [Gemmatimonas aurantiaca T-27]
gi|226090257|dbj|BAH38702.1| NADH-quinone oxidoreductase chain C [Gemmatimonas aurantiaca T-27]
Length = 213
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ F + GE + V L + +L D+P + ++D+ V++
Sbjct: 12 AATLKARFGADILRTDVVWGETIVYVTKARLHDIVRWLHDEPTERYDYLVDVTAVEYRDA 71
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVP--SIVGIYPGADWFEREVWDMYGIFFEG 126
+VV+H + ++ + LR+K+ + + + S+ IY GADW ERE +DM+GI F G
Sbjct: 72 DRPIEVVWHLRALQHRQFLRLKVELPKRGPLDVASVYDIYTGADWLERECYDMFGITFTG 131
Query: 127 HPDLRRILTDYGFE-GHPLRKDFPVTG 152
HPDLRR+L + G+PLRKDFP+ G
Sbjct: 132 HPDLRRLLLWEQYREGYPLRKDFPLRG 158
>gi|313813676|gb|EFS51390.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL025PA1]
Length = 274
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGPTVVDRGEITFFVRSEKLLELVEVLRDDDALRFESCTSLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY+ LS +NRR+R+ + V VPS+V +YP
Sbjct: 150 YPHMAGREMHVVYNLLSMTHNRRIRLEVALADPGQEDVARTGRSDVDSLPHVPSVVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ADW ERE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HADWQEREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|159899600|ref|YP_001545847.1| NADH (or F420H2) dehydrogenase subunit C [Herpetosiphon aurantiacus
ATCC 23779]
gi|218534278|sp|A9B4Z6|NUOC_HERA2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|159892639|gb|ABX05719.1| NADH (or F420H2) dehydrogenase, subunit C [Herpetosiphon
aurantiacus ATCC 23779]
Length = 171
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 5/164 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ + L + F + G+L L V+ L +L +LRD+P F + L
Sbjct: 1 MIDR-ATLEQRVSAQFPT--VRIGDESGDLCLTVERQQLPALAGWLRDEPDLAFTFLNQL 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDM 119
CGVD+L R RF+VV H S + R+ + I V E + +P A++ ERE +DM
Sbjct: 58 CGVDYLGRDPRFEVVVHLTSFQNKMRVTLHIEVPEADPTIPTLARLFPTANFQERETYDM 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+GI F GHP L RIL + GHP RKD P+ G+ E+ +
Sbjct: 118 FGIIFTGHPGLERILMPEDWLGHPQRKDHPL-GYEEVAFTHNED 160
>gi|296268309|ref|YP_003650941.1| NADH (or F420H2) dehydrogenase subunit C [Thermobispora bispora DSM
43833]
gi|296091096|gb|ADG87048.1| NADH (or F420H2) dehydrogenase, subunit C [Thermobispora bispora
DSM 43833]
Length = 214
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
D+G I F ++ G++ DV D V +F R C F L GVD
Sbjct: 4 DIGAAIRERFGSR-AEISDAFGQVVADVAPEDWVEALAFAR---SCGFEFFDWLTGVDDP 59
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
VV H ++ R L V+ V + G++ GADW ERE ++M+G+ FE
Sbjct: 60 --PEAIQVVAHVVNLTGVRHLLVRTRVPRDDPRLPSVTGVFRGADWHERETYEMFGVVFE 117
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVT 151
GHPDLR +L GFEGHPLRKDF +
Sbjct: 118 GHPDLRPLLLPDGFEGHPLRKDFVLA 143
>gi|182412308|ref|YP_001817374.1| NADH (or F420H2) dehydrogenase, subunit C [Opitutus terrae PB90-1]
gi|177839522|gb|ACB73774.1| NADH (or F420H2) dehydrogenase, subunit C [Opitutus terrae PB90-1]
Length = 209
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M I + F +V ++ +++V +LV+ LRD+ + ++D+
Sbjct: 1 MTATIA--AAALKQKFP-AVTDRASA-DHPAVNVAVTELVAALKTLRDEH--GYDVLMDV 54
Query: 61 CGVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAEG--KSVPSIVGIYPGADWFEREVW 117
+D+ S RF VVYH S ++ +RV A+ PSIV ++P A+W ERE +
Sbjct: 55 TAIDWSETSSPRFTVVYHVYSTTHHDYVRVAADCADDVAPVAPSIVSLWPAANWHERECY 114
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPV 170
DM+GI FEGHPDLRRIL G+ G PLRK+FP+ G D ++ V PV
Sbjct: 115 DMFGIKFEGHPDLRRILMWEGYPGWPLRKEFPLAGVETALPDPEISAVTGTPV 167
>gi|284039944|ref|YP_003389874.1| NADH (or F420H2) dehydrogenase, subunit C [Spirosoma linguale DSM
74]
gi|283819237|gb|ADB41075.1| NADH (or F420H2) dehydrogenase, subunit C [Spirosoma linguale DSM
74]
Length = 166
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ E++ I+N F +V + L+ +VSL FL++ P + D+
Sbjct: 1 MLTN-EEVAQIILNQFGETVTDFDDPYDLLTCSTSRDQIVSLVKFLKEHPTLQISFLTDI 59
Query: 61 CGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWD 118
+ + F VVYH S N R+R+K+ + +P+++ ++ GA+W ERE +D
Sbjct: 60 TAIHYPDSAGKEFCVVYHLHSLTKNFRIRIKVYLTTDDLHIPTLIPLFAGANWMERETFD 119
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
++GI F+GHPDLRRIL + HP+RK++P+
Sbjct: 120 LFGILFDGHPDLRRILNMEEMDYHPMRKEYPL 151
>gi|110637785|ref|YP_677992.1| NADH dehydrogenase I subunit C [Cytophaga hutchinsonii ATCC 33406]
gi|110280466|gb|ABG58652.1| NADH dehydrogenase subunit C [Cytophaga hutchinsonii ATCC 33406]
Length = 175
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + D ++N F + S G L++ ++ +++ +FL + F + DL GV +
Sbjct: 15 QHIIDSLINRFGDKIISTEESYGMLTITIERSYNMNVLNFLYSEASLGFTFLTDLTGVHY 74
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFF 124
+ VVYH + N R+RVK + ++ A+W ERE +D +GI F
Sbjct: 75 PQGEDLLGVVYHLHNLPENIRIRVKAFFPKADPYIDSATTLFQAANWMERETYDFFGIIF 134
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
GHP+L RIL HP+RK++ + +D
Sbjct: 135 TGHPNLIRILNVDDLGYHPMRKEYALEDPT--RHDKDD 170
>gi|90579191|ref|ZP_01235001.1| NADH dehydrogenase I, B/C/D subunits [Vibrio angustum S14]
gi|90440024|gb|EAS65205.1| NADH dehydrogenase I, B/C/D subunits [Vibrio angustum S14]
Length = 565
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
++ F E S +V L+ FL+++ F + DL +D R
Sbjct: 7 QILIERFGAKAPNHEIIGCE-SFEVKKEHLIDTLHFLKNEASSQFEMLFDLSAIDECERG 65
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
V Y+ LS K + ++ +A VP++VG++P A+W+EREV+DM+GI F HP
Sbjct: 66 GGLSVFYYLLSVKNKAFISIRTHIANDTIEVPTVVGLWPNANWYEREVYDMFGIKFTDHP 125
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
DLRRILT ++GHPLRK +P
Sbjct: 126 DLRRILTFDFWKGHPLRKSYP 146
>gi|227488706|ref|ZP_03919022.1| NADH dehydrogenase subunit C [Corynebacterium glucuronolyticum ATCC
51867]
gi|227091367|gb|EEI26679.1| NADH dehydrogenase subunit C [Corynebacterium glucuronolyticum ATCC
51867]
Length = 233
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN-RFDVVYHFLSPKYNRR 86
+L++ V L++ LRDD + GV + ++ VYHF S +N R
Sbjct: 87 DQLTIYVPREHLLAAAHALRDDQELRCETCSSVSGVHYPQDTDAELHAVYHFYSFTHNHR 146
Query: 87 LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+R ++ +PS+ GIYPG ++ ERE WDM+GI F+GHP L RIL + GHP R
Sbjct: 147 VRFEVVCPVNDPHIPSLTGIYPGVNFHERETWDMFGIIFDGHPSLTRILMPDDWSGHPQR 206
Query: 146 KDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
KD+ + G V + + D V PVE + +R
Sbjct: 207 KDYKLGG-VPVEFSDTD--VP--PVEDRRRYR 233
>gi|255708976|gb|ACU30393.1| NADH dehydrogenase subunit 9 [Silene flavescens]
gi|255709058|gb|ACU30434.1| NADH dehydrogenase subunit 9 [Silene yemensis]
Length = 131
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L F++ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFIKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVSLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|307205388|gb|EFN83729.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Harpegnathos saltator]
Length = 87
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
M+G+FF HPDLRRILTDYGFEGHPLRKDFP++G+VE+ YDD+ K++V P+EL QE R
Sbjct: 1 MFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDEHKRIVIEPLELTQEFRK 60
Query: 179 YDFLSPWEGVNSLFAKEDSKD 199
++ +PWE + + +
Sbjct: 61 FELAAPWEQFPNFRDAPPAAE 81
>gi|255709010|gb|ACU30410.1| NADH dehydrogenase subunit 9 [Silene muscipula]
Length = 131
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
L FL+ + F +ID+CGVD+ SR RF+VVY+ LS +YN R+RV+ + E +
Sbjct: 14 FQLLCFLKLHTYTRFQVLIDICGVDYPSRKLRFEVVYNLLSTRYNSRIRVQTSADEVTRI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+V ++P A +EREVWDM+G+ HPDLRRILTDYGFEGHPLRKDFP++G+VE+
Sbjct: 74 SPVVRLFPSAGRWEREVWDMFGLSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVR 131
>gi|116619254|ref|YP_821410.1| NADH (or F420H2) dehydrogenase subunit C [Candidatus Solibacter
usitatus Ellin6076]
gi|116222416|gb|ABJ81125.1| NADH (or F420H2) dehydrogenase, subunit C [Candidatus Solibacter
usitatus Ellin6076]
Length = 157
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 3/134 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
VR + GEL+L++ + S+C FL+ D FV + + VD RF++VYH
Sbjct: 23 VRGGKVTFGELTLEIAVPKIASICGFLKYDQ--KFVRVSTVTAVDRYPAEPRFEIVYHLH 80
Query: 80 SPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
S + N+R+R+K + + S+ G++ GA W+EREV+D++G+ F HPDLRRIL
Sbjct: 81 SIERNQRVRLKALLPGADPVIESVTGVWRGAGWYEREVFDLFGVRFLNHPDLRRILMPDD 140
Query: 139 FEGHPLRKDFPVTG 152
+EG+PLRKD+PVTG
Sbjct: 141 WEGYPLRKDYPVTG 154
>gi|301353206|ref|YP_003795203.1| NADH dehydrogenase subunit 9 [Proteromonas lacertae]
gi|301353244|ref|YP_003795241.1| NADH dehydrogenase subunit 9 [Proteromonas lacertae]
gi|290573154|gb|ADD46341.1| NADH dehydrogenase subunit 9 [Proteromonas lacertae]
gi|290573192|gb|ADD46379.1| NADH dehydrogenase subunit 9 [Proteromonas lacertae]
Length = 195
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 100/174 (57%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
++ ++ V ++ + + L +FL + C F + D+ VD+ R +R
Sbjct: 18 LIRLLPRTLNTVVARGRDIVITIVHFYLYIFLNFLNKNTFCLFKVLCDMTAVDWPVRVHR 77
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
FDVVY+ LS +YN R+R+K + +G + S Y A+WFERE+WD++GI F HP++
Sbjct: 78 FDVVYNLLSIQYNSRIRIKTVIGQGSPIISACLTYSNANWFEREIWDLFGILFYFHPNMC 137
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPW 185
RILTDYGF GH LRKDFPV GF ++ Y K V+ + + + +++ +PW
Sbjct: 138 RILTDYGFIGHALRKDFPVVGFFDVSYSLKTHSVIRENINNINDKKNFVCDTPW 191
>gi|251773165|gb|EES53718.1| NADH dehydrogenase (quinone), chain C [Leptospirillum
ferrodiazotrophum]
Length = 175
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + + F V + ++G+L++ + + + L DDP + I+D+ VD
Sbjct: 1 MHPVAESLHRRFPEIVTGSREALGDLTVYLKENGALEVFRVLHDDPEFRYDYIVDVTSVD 60
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIF 123
+ RF+VVY F S R+ VKI V E V IV I+ GA++ EREV+DM GI
Sbjct: 61 YPMDPERFEVVYIFYSLPRRHRILVKIRVPETHPVVDSIVSIWKGAEFMEREVYDMMGIQ 120
Query: 124 FEGHPDLRRILTDYGFE-GHPLRKDFPVTG 152
F GHPDLRRIL ++ G+PLRKDFP+ G
Sbjct: 121 FRGHPDLRRILMPDDYDEGYPLRKDFPLVG 150
>gi|196231862|ref|ZP_03130718.1| NADH (or F420H2) dehydrogenase, subunit C [Chthoniobacter flavus
Ellin428]
gi|196223984|gb|EDY18498.1| NADH (or F420H2) dehydrogenase, subunit C [Chthoniobacter flavus
Ellin428]
Length = 190
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + I F V GE +L V+ ++ L F + F ++DL
Sbjct: 1 MAASLSTAVSAISGKF--KVLKKTEFRGETTLQVERAEIKELARFCK--EQLGFTYLVDL 56
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVWDM 119
GVD RF+VVY LR+KI+V+E + V DW ERE +DM
Sbjct: 57 SGVDNFGEEPRFEVVYELYHFADGLYLRLKISVSEDELEVPTVSDLWATADWHEREAYDM 116
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVEL 156
YGI F GHP+L+RIL G+ +PLRKDFP+ G E+
Sbjct: 117 YGIQFAGHPELKRILMWEGYPFYPLRKDFPLAGRPSEM 154
>gi|294506286|ref|YP_003570344.1| NADH-quinone oxidoreductase chain c/d [Salinibacter ruber M8]
gi|294342614|emb|CBH23392.1| NADH-quinone oxidoreductase chain c/d [Salinibacter ruber M8]
Length = 251
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + F +V E ++ V+ + +C FL+++ F +DL G+D +
Sbjct: 67 DALREEFGAAVLDVERYANEDTVYVEKNRIREVCRFLKEEE--GFDYFVDLGGIDNFTAE 124
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+R++V Y+ +S + +RLR+K+ V E VPS+ +Y A+W ERE +DM+G F HP
Sbjct: 125 DRYEVFYNLVSTERQKRLRLKVQVDEGDMQVPSVTEVYRAANWNEREAYDMFGFSFVDHP 184
Query: 129 DLRRILTDYGFEGHPLRKDFPVTG 152
D RR+ F+ HPLRK+FP G
Sbjct: 185 DPRRMYMPEDFDYHPLRKEFPQLG 208
>gi|227542295|ref|ZP_03972344.1| NADH dehydrogenase subunit C [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181895|gb|EEI62867.1| NADH dehydrogenase subunit C [Corynebacterium glucuronolyticum ATCC
51866]
Length = 200
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN-RFDVVYHFLSPKYNRR 86
+L++ V L++ LRDD + GV + ++ VYHF S +N R
Sbjct: 54 DQLTIYVPREHLLAAAHALRDDQELRCETCSSVSGVHYPQDTDAELHAVYHFYSFTHNHR 113
Query: 87 LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+R ++ +PS+ GIYPG ++ ERE WDM+GI F+GHP L RIL + GHP R
Sbjct: 114 VRFEVVCPVDDPHIPSLTGIYPGVNFHERETWDMFGIIFDGHPSLTRILMPDDWSGHPQR 173
Query: 146 KDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
KD+ + G V + + D V PVE + +R
Sbjct: 174 KDYKLGG-VPVEFSDTD--VP--PVEDRRRYR 200
>gi|188996813|ref|YP_001931064.1| NADH-ubiquinone oxidoreductase chain 49kDa [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931880|gb|ACD66510.1| NADH-ubiquinone oxidoreductase chain 49kDa [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 580
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 5/147 (3%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
I + F+ + + ++++ +L+ L FL+++P F ID VD+
Sbjct: 9 AKRINSVFNVKIESY---KDIVWVEIEKDNLIDLLKFLKEEPDFSFKMFIDFTVVDYPYH 65
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ RF VY SP+YN R+ VK ++PS++ ++ GA W ERE +DM+GI F+GH
Sbjct: 66 NPRFQAVYILYSPEYNERIIVKTWT--DDTLPSLINLWKGAKWAEREAYDMFGIKFDGHD 123
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVE 155
+L R+ + +PLRKDFP GF +
Sbjct: 124 NLVRMFLWETYPYYPLRKDFPKEGFKD 150
>gi|189218227|ref|YP_001938869.1| NADH dehydrogenase subunit C [Methylacidiphilum infernorum V4]
gi|189185085|gb|ACD82270.1| NADH dehydrogenase subunit C [Methylacidiphilum infernorum V4]
Length = 213
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + I FS + GE +L +D + + +L+++ F ++D+ GVD
Sbjct: 8 LAEEIQKVFSIKLLEVKEFRGEWTLVMDLSIIQQVARYLKEEK--GFGLLLDISGVDHWG 65
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEG 126
RF+VVYHF + + LRVK V+E + + YP A+W ERE +DM+GI FEG
Sbjct: 66 EEPRFEVVYHFYNLQKATLLRVKGRVSEANPIVPTLSFIYPTANWHEREAYDMFGIIFEG 125
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTG 152
HPDLRRIL G+ +PLRKDFPV G
Sbjct: 126 HPDLRRILMWEGYPYYPLRKDFPVEG 151
>gi|295798102|emb|CAX68921.1| NADH-quinone oxidoreductase subunit C [uncultured bacterium]
Length = 156
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 60/144 (41%), Positives = 91/144 (63%), Gaps = 5/144 (3%)
Query: 12 IVNSFSGSVRFA--VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR- 68
I+ + + GE S+++ ++ L +L++D F ++DLCGVD+L +
Sbjct: 2 ILEKIKTKFQESRTSEYRGEASIEISKHQVLELLKYLKEDADLDFSVLMDLCGVDYLWQN 61
Query: 69 -SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
RF+VVYH S N RLRVK+A+ E ++PS+ ++P A+W+ERE WDM+GI F G
Sbjct: 62 RKPRFEVVYHLYSISKNHRLRVKVALQEEDLTIPSVAPLWPAANWYEREAWDMFGIKFVG 121
Query: 127 HPDLRRILTDYGFEGHPLRKDFPV 150
HP+L+RIL F+GHPLRKD+P+
Sbjct: 122 HPNLKRILLYEEFQGHPLRKDYPI 145
>gi|312885501|ref|ZP_07745139.1| NADH dehydrogenase subunit C [Mucilaginibacter paludis DSM 18603]
gi|311301969|gb|EFQ79000.1| NADH dehydrogenase subunit C [Mucilaginibacter paludis DSM 18603]
Length = 165
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + + F V + G + +L + + +C LRD+P F + L GVD
Sbjct: 4 DDIKNILTAKFGDGVIVGEETTGLQPALLIAPEMIAQVCLELRDNPETYFDFLSCLSGVD 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIA------VAEGKSVPSIVGIYPGADWFEREVWD 118
+ + NRF VVYH S YN RL +KI+ + E S PSI +Y ADW ERE +D
Sbjct: 64 YGTAENRFGVVYHLSSIPYNFRLTLKISKLSSRLLNELPSFPSISSVYKAADWHEREAYD 123
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
M GIFFE HPDLRRIL +EG PLRKD+
Sbjct: 124 MTGIFFENHPDLRRILLPDDWEGFPLRKDY 153
>gi|89073315|ref|ZP_01159845.1| NADH dehydrogenase I, B/C/D subunits [Photobacterium sp. SKA34]
gi|89051025|gb|EAR56489.1| NADH dehydrogenase I, B/C/D subunits [Photobacterium sp. SKA34]
Length = 565
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
++ F E S +V L+ FL+++ F + DL +D R
Sbjct: 7 QLLIERFDAKAPNHEIIGCE-SFEVKKEHLIDTLHFLKNEASSRFEMLFDLSAIDECERG 65
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
V Y+ LS K + + ++ +A VP++VG++P A+W+EREV+DM+GI F HP
Sbjct: 66 GGLSVFYYLLSVKNKQFISIRTHIANDTIEVPTVVGLWPNANWYEREVYDMFGIKFTDHP 125
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
DLRRILT ++GHPLRK +P
Sbjct: 126 DLRRILTFDFWKGHPLRKSYP 146
>gi|83814916|ref|YP_444540.1| NADH-quinone oxidoreductase chain c/d [Salinibacter ruber DSM
13855]
gi|83756310|gb|ABC44423.1| NADH-quinone oxidoreductase chain c/d [Salinibacter ruber DSM
13855]
Length = 234
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + F +V E ++ V+ + +C FL+++ F +DL G+D +
Sbjct: 50 DALREEFGAAVLDVERYANEDTIYVEKNRIREVCRFLKEEE--GFDYFVDLGGIDNFTAE 107
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+R++V Y+ +S + +RLR+K+ V E VPS+ +Y A+W ERE +DM+G F HP
Sbjct: 108 DRYEVFYNLVSTERQKRLRLKVQVDEGDMQVPSVTEVYRAANWNEREAYDMFGFSFVDHP 167
Query: 129 DLRRILTDYGFEGHPLRKDFPVTG 152
D RR+ F+ HPLRK+FP G
Sbjct: 168 DPRRMYMPEDFDYHPLRKEFPQLG 191
>gi|322436004|ref|YP_004218216.1| NADH (or F420H2) dehydrogenase, subunit C [Acidobacterium sp.
MP5ACTX9]
gi|321163731|gb|ADW69436.1| NADH (or F420H2) dehydrogenase, subunit C [Acidobacterium sp.
MP5ACTX9]
Length = 163
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
+ A EL++ V ++ ++ + + D+ VD+ RF V
Sbjct: 26 ALKSIATNAKFDREELTIVVPGESIIEATQAVK---AAGYNFLEDVTCVDWYPSEPRFQV 82
Query: 75 VYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
YH LS R+R+ + + V SIV ++P A+++ERE++D++GI F GHP+++RI
Sbjct: 83 TYHILSHALKTRVRLHVLLDSASPSVNSIVPVWPSANFYEREIFDLFGIHFGGHPNMKRI 142
Query: 134 LTDYGFEGHPLRKDFPVTGF 153
+ ++GHPLRKD+PV G+
Sbjct: 143 MMPEDWQGHPLRKDYPVEGY 162
>gi|148675793|gb|EDL07740.1| mCG50233, isoform CRA_b [Mus musculus]
Length = 174
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 41/196 (20%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ +Y+ V+ S + +L + + ++ +FLRD + F ++ DL
Sbjct: 6 KQLSAFAEYVAEILPKYVQQVQVSCLDKLEICIHHDGVIPTLTFLRDHTNAQFKSLADLT 65
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD +R NRF++VY+ LS ++N R+RVK E + SIV ++ A+W+ERE
Sbjct: 66 AVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYERE------ 119
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF 181
L YDD+VK+VV PVEL QE R +D
Sbjct: 120 ----------------------------------LRYDDEVKRVVAEPVELAQEFRKFDL 145
Query: 182 LSPWEGVNSLFAKEDS 197
SPWE + +S
Sbjct: 146 NSPWEAFPAYRQPPES 161
>gi|315102680|gb|EFT74656.1| NADH dehydrogenase, subunit C [Propionibacterium acnes HL046PA1]
Length = 274
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 6 EDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D + V GE++ V L+ L LRDD F + L V
Sbjct: 90 DEVADRMAELVPDFSDGLTVVDRGEITFFVRPEKLLELVKVLRDDDALRFESCTSLTCVH 149
Query: 65 FLSR-SNRFDVVYHFLSPKYNRRLRV----------------KIAVAEGKSVPSIVGIYP 107
+ VVY+ LS +NRR+R+ + V VPS+V +YP
Sbjct: 150 YPHMAGREMHVVYNLLSMTHNRRIRLEVALADPGQEDVARTGRSDVDSLPHVPSVVSVYP 209
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
ADW RE WDM+G+ F+GHP L RIL + GHP RKD+P+ G
Sbjct: 210 HADWQGREAWDMFGVIFDGHPALTRILMPDDWVGHPQRKDYPLGG 254
>gi|317051069|ref|YP_004112185.1| NADH (or F420H2) dehydrogenase subunit C [Desulfurispirillum
indicum S5]
gi|316946153|gb|ADU65629.1| NADH (or F420H2) dehydrogenase, subunit C [Desulfurispirillum
indicum S5]
Length = 177
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++++ + +SFS ++ G+ ++ VD +V + + L++DP F ++D+ VD
Sbjct: 1 MQEVISRLQSSFSSHIKEVTEYRGQKTVVVDSDAIVDVLALLKNDPELNFQFLLDITVVD 60
Query: 65 FLSRSNR----FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
+L R F VVY S + N+ L VK VA+ + VPS+ G++ A+W ERE +D
Sbjct: 61 YLLYPQRKEARFAVVYMLRSWETNKLLVVKTYVADPQKGVPSVTGLWKSANWAEREAYDQ 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
YG+ F GHP L+R+L F GHPLRKD+P+T
Sbjct: 121 YGVHFSGHPMLKRLLNHKEFIGHPLRKDYPIT 152
>gi|299138541|ref|ZP_07031720.1| NADH (or F420H2) dehydrogenase, subunit C [Acidobacterium sp.
MP5ACTX8]
gi|298599787|gb|EFI55946.1| NADH (or F420H2) dehydrogenase, subunit C [Acidobacterium sp.
MP5ACTX8]
Length = 168
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVV 75
+ + A EL+L V +++ + + D+ VD+ RF +
Sbjct: 33 LADLIVDAKWDRKELTLTVAPDTIIAAAK---AAQAAGYNFLEDVTAVDWYPTEPRFQIC 89
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y LS +R+R+ ++EG+S+ SI ++P A+++EREV+D++G+ F GHP L RI+
Sbjct: 90 YSILSFGLKQRIRLVARISEGQSIDSITSVWPSANFYEREVFDLFGVHFGGHPRLTRIMM 149
Query: 136 DYGFEGHPLRKDFPVTGF 153
+EGHPLRKD+PV G+
Sbjct: 150 PDNWEGHPLRKDYPVEGY 167
>gi|312131896|ref|YP_003999236.1| NADH dehydrogenase subunit c [Leadbetterella byssophila DSM 17132]
gi|311908442|gb|ADQ18883.1| NADH dehydrogenase subunit C [Leadbetterella byssophila DSM 17132]
Length = 166
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ + L + I F VR + G LS DL+ + SFL++ P F + D+
Sbjct: 1 MINN-QTLVEEISGQFGEKVRGFEENSGILSFVASPEDLLDIVSFLKEHPVLKFNFLTDI 59
Query: 61 CGVDFLSRSN-RFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWD 118
G+ F F +Y S + R+R+++ +++ VPS+ I+ GADW ERE +D
Sbjct: 60 TGIHFPDNEGAEFCSLYMLHSWENRIRVRIRVFLSKDNLEVPSLTPIFKGADWMEREAFD 119
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFV 154
YGI + GHP+L+RIL + HP+RK++ +
Sbjct: 120 FYGIIYTGHPNLKRILNMEDMDYHPMRKEYALEDPT 155
>gi|295697743|ref|YP_003590981.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Bacillus tusciae
DSM 2912]
gi|295413345|gb|ADG07837.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Bacillus tusciae
DSM 2912]
Length = 270
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++D+ I + +V L + + ++L++ F + + G D
Sbjct: 123 LDDVLRRIQERYPDAVEAGEVKKFTPMLLIKRESWREVAAYLKEGDGLGFRYLEAIAGTD 182
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ + P+ A E VPS+V ++PGA+W ERE++D+ G+ F
Sbjct: 183 YPKEGYIEVTAFLTRIPEATMVGIKVRAPREAPVVPSLVPVFPGANWDEREIYDLLGVTF 242
Query: 125 EGHPDLRRILTDYGFEGHPLRKDF 148
HPDLRRI+ ++GHPLRKD+
Sbjct: 243 ADHPDLRRIMMPDDWQGHPLRKDY 266
>gi|269794075|ref|YP_003313530.1| NADH dehydrogenase subunit C [Sanguibacter keddieii DSM 10542]
gi|269096260|gb|ACZ20696.1| NADH dehydrogenase subunit C [Sanguibacter keddieii DSM 10542]
Length = 253
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 8 LGDYIVN---SFSGSVRFAVNS-------VGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
L + + +F +V V EL++ V LV++C LRDD F
Sbjct: 77 LAEVLAEDGVAFDAAVEGVVVDPPAGSGARTELTIHVRREHLVAVCRALRDDQDLRFELS 136
Query: 58 IDLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFERE 115
+ + GV F VYH S + R LR+++ V + VP+ +YP DW ERE
Sbjct: 137 LGVSGVHFPGDTGRELHAVYHLTSVTHGRSLRLEVTVPDADPHVPTTTTVYPTNDWHERE 196
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD------DKVKK 164
WD +GI F+GHP L RI + GHP RKD+P+ G + + Y ++
Sbjct: 197 TWDFFGIVFDGHPALARIAMPDDWPGHPQRKDYPLGG-IPVEYKGATVPPPDQRR 250
>gi|237757075|ref|ZP_04585518.1| NADH-quinone oxidoreductase, subunit c/d [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690764|gb|EEP59929.1| NADH-quinone oxidoreductase, subunit c/d [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 580
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
I + F+ + + ++++ +L++L FL++DP F ID VD+
Sbjct: 9 AKRINSVFNVKIGSY---KDNVWVEIEKDNLINLLRFLKEDPDFSFKMFIDFTVVDYPYH 65
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
S RF VY SP+Y+ R+ VK ++PS++ ++ GA W ERE +DM+GI F+GH
Sbjct: 66 SPRFQAVYILYSPEYSERIIVKTWT--DDTLPSLINLWKGAKWAEREAYDMFGIKFDGHD 123
Query: 129 DLRRILTDYGFEGHPLRKDFPVTG 152
+L R+ + +PLRKDFP G
Sbjct: 124 NLVRMFLWETYPYYPLRKDFPKEG 147
>gi|320107661|ref|YP_004183251.1| NADH (or F420H2) dehydrogenase subunit C [Terriglobus saanensis
SP1PR4]
gi|319926182|gb|ADV83257.1| NADH (or F420H2) dehydrogenase, subunit C [Terriglobus saanensis
SP1PR4]
Length = 160
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP 81
A EL++ V D+V+ C + + + VD+ RF + YH +S
Sbjct: 30 KAKFDRNELTITVARQDIVAAC---KAVQAAGYNFFETVTAVDWYPNEPRFVLAYHIVSM 86
Query: 82 KYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
R+R+ + ++ V +I ++P A+++EREV+D++GI F GHP+L RI+ +E
Sbjct: 87 TLKERIRLAVEISGENPSVDTITAVWPSANFYEREVFDLFGIHFAGHPNLTRIMMPLDWE 146
Query: 141 GHPLRKDFPVTGF 153
GHPLRKD+PV G+
Sbjct: 147 GHPLRKDYPVEGY 159
>gi|21673598|ref|NP_661663.1| NADH dehydrogenase I, 30 kDa subunit [Chlorobium tepidum TLS]
gi|21646712|gb|AAM72005.1| NADH dehydrogenase I, 30 kDa subunit [Chlorobium tepidum TLS]
Length = 173
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
D I F ++ + +V D V + ++RD+ F + L GVD+
Sbjct: 20 DNIKERFGDAISEFDANPTMPFFEVLDVSKWVDIALYMRDNSLLQFNYLACLSGVDYPEE 79
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGH 127
V KY ++ VK+ V + A+W ERE +DMYG+ FEGH
Sbjct: 80 QKLGIVCNLECIGKYTHKIAVKVKCPRDGGSIPSVSCVWHTANWHEREAYDMYGMVFEGH 139
Query: 128 PDLRRILTDYGFEGHPLRKDF 148
PDLRRIL + G PLRKD+
Sbjct: 140 PDLRRILCPEDWTGFPLRKDY 160
>gi|119356791|ref|YP_911435.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium
phaeobacteroides DSM 266]
gi|218534273|sp|A1BF34|NUOC_CHLPD RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|119354140|gb|ABL65011.1| NADH dehydrogenase subunit C [Chlorobium phaeobacteroides DSM 266]
Length = 166
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 1 MVRKIED-LGDY--IVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVN 56
M ++++ L Y + F +V ++ +V D + F+RD P F
Sbjct: 1 MTQQVKQALAAYDVVREKFGDAVSAFDSNETMPFFEVLDTDQWPDIALFMRDHPKLKFNY 60
Query: 57 IIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFERE 115
+ L GVD+ V R+ VK+ + V + A+W ERE
Sbjct: 61 MACLSGVDYPQEEKLGIVCNLESVAALGHRVAVKVRCSRDGGSIPSVACVWHTANWHERE 120
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+DM+G+ F GHPDLRRIL +EG PLRKD+ V
Sbjct: 121 AYDMFGMLFSGHPDLRRILCPEDWEGFPLRKDYKVQ 156
>gi|187736634|ref|YP_001878746.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Akkermansia
muciniphila ATCC BAA-835]
gi|187426686|gb|ACD05965.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Akkermansia
muciniphila ATCC BAA-835]
Length = 194
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 4 KIEDLGDYIVNSFSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+I+ D N F + G+++L V + + +LRD F +++L
Sbjct: 7 QIKTAADNAQNRFGKDIITDRYEFRGDITLTVARQAVADVVRWLRD--SAGFDMLVNLSS 64
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD + S RF+V Y + L +K V +G+ VPS+ I+ A+W ERE WD+ GI
Sbjct: 65 VDNMGESPRFEVNYTLTQSETGANLSLKTKVDDGEEVPSVTEIFQSANWHEREAWDLMGI 124
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F GHPDLRRIL G+ PLRKDFPV G
Sbjct: 125 KFSGHPDLRRILMWEGYPYFPLRKDFPVQG 154
>gi|188996568|ref|YP_001930819.1| NADH-ubiquinone oxidoreductase chain 49kDa [Sulfurihydrogenibium
sp. YO3AOP1]
gi|218534336|sp|B2V8J2|NUOCD_SULSY RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|188931635|gb|ACD66265.1| NADH-ubiquinone oxidoreductase chain 49kDa [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 576
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+E + F G LS++V + +FL++DP F IDL +
Sbjct: 5 SLEK-AKKLEERFGYP--KVSEGKGVLSVEVPKDKFIEFLTFLKEDPEYQFKMFIDLTII 61
Query: 64 DFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
D + N F V SPK R+ VK +++P++ ++ GA W ERE WDM+GI
Sbjct: 62 DHGEKENPRFQGVVILFSPKNQERIIVKTWAE-NETLPTLTNLWKGAKWAEREAWDMFGI 120
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
FEGH +L R+L + HPLRKDFP+ G
Sbjct: 121 KFEGHENLVRMLLWETYPYHPLRKDFPLEG 150
>gi|313672279|ref|YP_004050390.1| NADH dehydrogenase subunit c [Calditerrivibrio nitroreducens DSM
19672]
gi|312939035|gb|ADR18227.1| NADH dehydrogenase subunit C [Calditerrivibrio nitroreducens DSM
19672]
Length = 164
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
DL + F + + G + VD L ++ D F ++D+ +
Sbjct: 5 DLVAKLGEKFPSKI-NSYEKFGTRFIVVDRAVAKDLLRSMKYD--FGFTYLVDIVATHWP 61
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
R +FDVVY+ S R+ VK ++ + ++ I+ GA++ ERE +D+ G+ FEG
Sbjct: 62 KRKEKFDVVYNLFSINDKLRVFVKYSIE-NEKTFTVTDIWQGANFLEREQYDLVGVVFEG 120
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTG 152
HPDLRRIL F+GHPLRK++P+ G
Sbjct: 121 HPDLRRILLPEFFDGHPLRKEYPLKG 146
>gi|297625189|ref|YP_003706623.1| NADH (or F420H2) dehydrogenase subunit C [Truepera radiovictrix DSM
17093]
gi|297166369|gb|ADI16080.1| NADH (or F420H2) dehydrogenase, subunit C [Truepera radiovictrix
DSM 17093]
Length = 216
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ ++ + + + G +S+ V LV + + F I D+
Sbjct: 1 MTLLQRTAESLRLRYGAKRNEFK---GMVSVTVPKERLVDAVRTAK---NAGFEMISDIF 54
Query: 62 GVDFLSRSNR----FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVW 117
G+D+L+ F VVY+ S +N RL +++ + +G+++P+I ++ GA++ EREV+
Sbjct: 55 GIDYLTYPGHQGARFTVVYNLYSLTHNERLFIRVDLDDGEALPTITPLWRGANFMEREVY 114
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
DM+GI FEGHPDLR++LT +GHP RKDFP+
Sbjct: 115 DMFGIPFEGHPDLRKLLTPEDLDGHPHRKDFPL 147
>gi|320353963|ref|YP_004195302.1| NADH (or F420H2) dehydrogenase subunit C [Desulfobulbus propionicus
DSM 2032]
gi|320122465|gb|ADW18011.1| NADH (or F420H2) dehydrogenase, subunit C [Desulfobulbus
propionicus DSM 2032]
Length = 194
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ D + F V + G+ ++ + G +V + +LRD ++ LCGVD L
Sbjct: 6 IIDRLRAEFPDEVVQGYVNQGQGAVVIRSGRIVEMLRWLRDSDDLRMNHLRSLCGVDNLR 65
Query: 68 RSNR----FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
R F+VVY+ S +R++ V + + S+V ++PGADW ERE +D+ GI
Sbjct: 66 RKGPGLSRFEVVYNLYSIPLRHEIRLRAEVGDKDPAIDSVVELWPGADWLERETFDLMGI 125
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
F HP+L R+L + GHPLRKD+P+ G E
Sbjct: 126 RFTNHPNLHRVLLPEDWVGHPLRKDYPLKGKEE 158
>gi|253698814|ref|YP_003020003.1| trifunctional NADH dehydrogenase I subunit B/C/D [Geobacter sp.
M21]
gi|251773664|gb|ACT16245.1| NADH dehydrogenase I, D subunit [Geobacter sp. M21]
Length = 794
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI-----IDLC 61
+L + + +F+G V + L+ + + L++ F + +D
Sbjct: 229 NLKEELQGAFAGQVVLDETACDMLTYRAPARLVPEILRHLKERKESPFRRLEDIACVDES 288
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
R F V YH R+R+K + PS+ ++P ADW+ERE +DM+
Sbjct: 289 CRRDRDRYKDFTVNYHLTCFDTPGRVRIKTELEGSYPETPSVTSVFPVADWYEREAYDMF 348
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
GI F GHP+LRRIL + GHPLRK+ P Y + +
Sbjct: 349 GIRFAGHPNLRRILMPPDWVGHPLRKEHPARATELPPYTAEDAR 392
>gi|255037833|ref|YP_003088454.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dyadobacter
fermentans DSM 18053]
gi|254950589|gb|ACT95289.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dyadobacter
fermentans DSM 18053]
Length = 166
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ +++ + ++ F V G L+L +++ L FL+D H + + D+
Sbjct: 1 MLTN-QEVAEGLLEKFGDQVFDFEEPYGLLTLSTTREEIIPLMEFLKDHKHYQVIFLTDI 59
Query: 61 CGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWD 118
GV + + VVYH S +N R+R+K+A++ +P+ G++ A+W ERE +D
Sbjct: 60 TGVQYPDNAGKEYVVVYHMHSFVHNFRIRIKVALSAADIHIPTATGLFASANWMERETYD 119
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
+GI F+GHP+LRRIL + P+RK++P+
Sbjct: 120 FFGILFDGHPNLRRILNIEEMDYFPMRKEYPM 151
>gi|156363158|ref|XP_001625914.1| predicted protein [Nematostella vectensis]
gi|156212769|gb|EDO33814.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 57/74 (77%)
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
WDMYG+FF HPDLRRILTDYGFEGHP RKDFPV G+VE+ YDD++K++V P+E+ QE
Sbjct: 18 GWDMYGVFFSNHPDLRRILTDYGFEGHPFRKDFPVQGYVEVRYDDELKRLVCEPIEMAQE 77
Query: 176 HRDYDFLSPWEGVN 189
+R +D WE
Sbjct: 78 YRKFDISPTWEQFP 91
>gi|197116578|ref|YP_002137005.1| trifunctional NADH dehydrogenase subunit I B/C/D [Geobacter
bemidjiensis Bem]
gi|218528047|sp|B5E972|NUBCD_GEOBB RecName: Full=NADH-quinone oxidoreductase subunit B/C/D; AltName:
Full=NADH dehydrogenase I subunit B/C/D; AltName:
Full=NDH-1 subunit B/C/D
gi|197085938|gb|ACH37209.1| NADH dehydrogenase I, B/C/D subunits [Geobacter bemidjiensis Bem]
Length = 794
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI-----IDLC 61
+L + +F+G V + L+ + L L++ F + +D
Sbjct: 229 NLQAELQGAFAGQVVLDETACDMLTYRAPARLVPELLRHLKERKESPFRRLEDIACVDES 288
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
+ F V YH R+R+K + PSI ++P A+W+ERE +DM+
Sbjct: 289 CRRDREKYKDFTVNYHLTCFDTPGRIRIKTELEGSYPEAPSITSVFPVANWYEREAYDMF 348
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
GI F GHP+LRRIL ++GHPLRK+ P Y + +
Sbjct: 349 GIRFAGHPNLRRILMPPDWDGHPLRKEHPARATELPPYTAEDAR 392
>gi|237756345|ref|ZP_04584895.1| NADH-quinone oxidoreductase, subunit c/d [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691496|gb|EEP60554.1| NADH-quinone oxidoreductase, subunit c/d [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 576
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+E + F G +S++V + +FL++DP F IDL +
Sbjct: 5 SLEK-AKKLEERFGYP--KVSEGKGVVSVEVPKDKFIEFLTFLKEDPEYQFKMFIDLTII 61
Query: 64 DFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
D + N F V SPK R+ VK +++P++ ++ GA W ERE WDM+GI
Sbjct: 62 DHGEKENPRFQGVVILFSPKNQERIIVKTWAE-NETLPTLTNLWKGAKWAEREAWDMFGI 120
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
FEGH +L R+L + HPLRKDFP+ G
Sbjct: 121 KFEGHENLVRMLLWETYPYHPLRKDFPLEG 150
>gi|225848102|ref|YP_002728265.1| NADH-quinone oxidoreductase subunits chi/delta
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643899|gb|ACN98949.1| NADH-quinone oxidoreductase subunit c/d (nadhdehydrogenase i
subunit c/d) (ndh-1 subunit c/d) (Nuo3/nuo4)
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 577
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ F + + + G +S++V + FL++D F +DL +D +
Sbjct: 9 AKKLEERFG-YPKVSQDKSGVVSVEVPKDKFIEFLKFLKEDKEYDFRMFLDLTIIDHGEK 67
Query: 69 S-NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
RF V SP Y R+ VK +++P++ ++ GA W ERE WDM+GI FEGH
Sbjct: 68 EDPRFQGVVILFSPTYQHRIIVKTWA-LDETLPTLTNLWKGAKWAEREAWDMFGIKFEGH 126
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTG 152
+L R+L + HPLRKDFP+ G
Sbjct: 127 ENLVRMLLWETYPYHPLRKDFPLEG 151
>gi|193212956|ref|YP_001998909.1| NADH (or F420H2) dehydrogenase subunit C [Chlorobaculum parvum NCIB
8327]
gi|193086433|gb|ACF11709.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobaculum parvum
NCIB 8327]
Length = 166
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
D I F +V + +V D V + ++RD+ F + L G+D+
Sbjct: 13 DIIKERFGDAVSEFDANPTMPFFEVLDASRWVDIALYMRDNSLLQFNYLACLSGMDYPEE 72
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGH 127
V KY +L VK+ V + A+W ERE +DMYG+ FE H
Sbjct: 73 EKLGIVCNLECIGKYTHKLAVKVKCQRDGGSIPSVSCVWHTANWHEREAYDMYGMVFEDH 132
Query: 128 PDLRRILTDYGFEGHPLRKDFPVT 151
PDLRRIL + G+PLRKD+ V
Sbjct: 133 PDLRRILCPEDWTGYPLRKDYKVQ 156
>gi|78778021|ref|YP_394336.1| NADH dehydrogenase subunit C [Sulfurimonas denitrificans DSM 1251]
gi|78498561|gb|ABB45101.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfurimonas
denitrificans DSM 1251]
Length = 268
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ I + F+ V A VG++ + ++ D + LRD C + + ++ +D+L+
Sbjct: 42 EVIKSKFN--VLDAYIQVGQMVVYINPADNYKVLELLRD--ECEYTQLSEMSAIDWLAAK 97
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
F+V Y LS +RLR+K+ + +G+++ S+ ++ ADW ERE++DM+GI GHP
Sbjct: 98 GEFEVFYQMLSMNKRKRLRIKMFIKKGEAINSVEKLFRSADWSEREMFDMFGIEANGHPF 157
Query: 130 LRRILTDYGFEGHPLRKDFPVTG 152
++RIL Y ++GHPL K +P+ G
Sbjct: 158 MKRILMPYDWQGHPLLKTYPLQG 180
>gi|268678782|ref|YP_003303213.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfurospirillum
deleyianum DSM 6946]
gi|268616813|gb|ACZ11178.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfurospirillum
deleyianum DSM 6946]
Length = 266
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ +SF ++ + G+L L ++ D + + FLRD + + + +D+L++S
Sbjct: 43 KDLESSF--FIKESYIQRGQLVLYINAKDNLKVLEFLRD--KLSYNFLSEHSAIDWLAKS 98
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
F++ Y LS +RLRVK + E +++ S+ +Y ADW ERE++DM+G+ GHP
Sbjct: 99 GEFEIFYQLLSTSKRKRLRVKCFLKEKETLQSVSNVYKSADWAEREMYDMFGVIISGHPY 158
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
++R+L + HPLRK +P+ G + + K
Sbjct: 159 MKRLLMPDDWYDHPLRKTYPLQGDEVAQWYEIDK 192
>gi|152990039|ref|YP_001355761.1| NADH dehydrogenase subunit C [Nitratiruptor sp. SB155-2]
gi|151421900|dbj|BAF69404.1| NADH-quinone oxidoreductase, chain C [Nitratiruptor sp. SB155-2]
Length = 263
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+E L +YI V+ A G++ + +D D V+ L+ +C + + ++
Sbjct: 38 ADLESLKEYI------DVKDAYIERGQMVIIIDAKDNVATLKHLK--ENCGYDVLSEMSA 89
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+D+L++ F++ Y L+ +R+RVK + E +++ S+ ++ ADW ERE++DM+GI
Sbjct: 90 IDYLAKDGEFEIFYQLLALSKRKRVRVKCRIKEDEAIESVEPLFRSADWSEREMYDMFGI 149
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
HP L+RIL + G+PLRK +P+ G + + K
Sbjct: 150 KVNNHPYLKRILMPEDWVGYPLRKTYPLHGDEAAQWYEVDK 190
>gi|124003619|ref|ZP_01688468.1| NADH-quinone oxidoreductase chain c [Microscilla marina ATCC 23134]
gi|123991188|gb|EAY30640.1| NADH-quinone oxidoreductase chain c [Microscilla marina ATCC 23134]
Length = 166
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 6 EDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ D ++ + + A S + V + +C+ L + F + + G+D
Sbjct: 4 QEIKDLLIQALGKEVIIEANESAMQPFFTVQTDQIKEVCTELYQNERTYFDFLNCITGID 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG------KSVPSIVGIYPGADWFEREVWD 118
+ N +VVY+ S +N RL +K+ + VPS+ ++ A+W ERE +D
Sbjct: 64 NGEKMNTMEVVYNLTSIPHNLRLTLKVVLPRNITGEAAPQVPSVCEVWRAANWHERETYD 123
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ GI F GHPDLRRIL +EGHPLRKD+
Sbjct: 124 LLGIEFVGHPDLRRILLPADWEGHPLRKDY 153
>gi|86158995|ref|YP_465780.1| NADH (or F420H2) dehydrogenase subunit C [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85775506|gb|ABC82343.1| NADH dehydrogenase subunit C [Anaeromyxobacter dehalogenans 2CP-C]
Length = 196
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ + + F V + V +V + FL +P + DL
Sbjct: 1 MTT--HEIHERLKARFGDDVGPLSEPKIDAFCVVKAERIVEVSRFLAAEPALEMDFLEDL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDM 119
VD+ + N +VVYH LS ++ + +K+ V V ++ A+WFEREV+D+
Sbjct: 59 TAVDWP-KRNVIEVVYHLLSYRHRHSIVLKVEADRAAPVVPTVEGVWKTANWFEREVYDL 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+G+ F GHPDLRR++ + GHPLRKD+ G
Sbjct: 118 FGVTFTGHPDLRRLMLPDDWVGHPLRKDYQEAG 150
>gi|197121686|ref|YP_002133637.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter sp. K]
gi|196171535|gb|ACG72508.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter sp. K]
Length = 196
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ + + F V + V +V + FL +P + DL
Sbjct: 1 MTT--HEIHERLKARFGDDVGPLSEPKIDAFCVVKAERIVEVSRFLATEPGLEMDFLEDL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDM 119
VD+ + N +VVYH LS ++ + +K+ V V ++ A+WFEREV+D+
Sbjct: 59 TAVDWP-KRNVIEVVYHLLSYRHRHSIVLKVEADRAAPVVPTVEGVWKTANWFEREVYDL 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+G+ F GHPDLRR++ + GHPLRKD+ G
Sbjct: 118 FGVSFPGHPDLRRLMLPDDWVGHPLRKDYQEAG 150
>gi|226315028|ref|YP_002774924.1| NADH dehydrogenase subunit C [Brevibacillus brevis NBRC 100599]
gi|226097978|dbj|BAH46420.1| NADH-quinone oxidoreductase chain C [Brevibacillus brevis NBRC
100599]
Length = 424
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGEL-----SLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
++ I +F V A + EL +L + + FLRDD F + D
Sbjct: 272 LDKYVSRISEAFGQEVIEASY-INELGKEVPTLTIQNERWHQVAQFLRDDEQLSFEYLSD 330
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWD 118
L GVD+ +R +V YHF S K + L VK+ + + V S++ ++ GA+W ERE +D
Sbjct: 331 LHGVDY---EDRLEVYYHFYSYKNRQSLAVKVKTSREESKVASVMDLWHGANWNERETFD 387
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
+ GI F GH DLRRIL + G+PLRKD+ + YD++
Sbjct: 388 LLGIHFPGHKDLRRILLPDDWVGYPLRKDY-------VQYDEE 423
>gi|320354160|ref|YP_004195499.1| NADH dehydrogenase subunit D; NADH dehydrogenase subunit C
[Desulfobulbus propionicus DSM 2032]
gi|320122662|gb|ADW18208.1| NADH dehydrogenase subunit D; NADH dehydrogenase subunit C
[Desulfobulbus propionicus DSM 2032]
Length = 571
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL--- 66
+ I +F + A + L V L S L++DP F ++D+ VD+L
Sbjct: 7 ELIQAAFPEAPCTATI--DSVVLTVQPEYLEKTLSRLKNDPTLNFSLLLDVTAVDYLNYP 64
Query: 67 -SRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
RF VVY + + NR ++V++ V +P+ G++ A+W ERE +D YGI F
Sbjct: 65 EWHEARFFVVYTLRNWEQNRLVQVRVPVADPEVGIPTATGLWDSANWGERETYDQYGIVF 124
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
+GHPDLRRIL + F+GHPLRKD+P+ + ++ Y L +E
Sbjct: 125 QGHPDLRRILNHWQFQGHPLRKDYPI----------EQGQICYESDSLEKE 165
>gi|110636932|ref|YP_677139.1| NADH dehydrogenase I subunit C, D [Cytophaga hutchinsonii ATCC
33406]
gi|110279613|gb|ABG57799.1| NADH dehydrogenase subunit C [Cytophaga hutchinsonii ATCC 33406]
Length = 168
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +D+ I F + + ++ + L V L +C FLRDD F +
Sbjct: 1 MSYTFQDIKAAIAERFGEAAITGEQAALAQPQLLVQKAFLKDICFFLRDDERFFFDQLSC 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG------KSVPSIVGIYPGADWFE 113
L G+D N +V+YH S ++ L +K+ G +PS+ ++ ADW E
Sbjct: 61 LTGLDNGPVKNTVEVIYHLYSIPFHLFLVIKVEAERGDGKDILPEIPSVEQVWRTADWHE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
RE +D+YGI F GHPDLRRIL +EG+PLRKD+
Sbjct: 121 REAFDLYGIRFSGHPDLRRILLPADWEGYPLRKDY 155
>gi|183220688|ref|YP_001838684.1| NADH-quinone oxidoreductase subunit C [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189910789|ref|YP_001962344.1| NADH dehydrogenase subunit C [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775465|gb|ABZ93766.1| NADH dehydrogenase (ubiquinone), C chain [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779110|gb|ABZ97408.1| NADH-quinone oxidoreductase, chain C [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 173
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 6 EDLGDYIVNSFSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E L ++I F + + L + L + L+D P F + DL +D
Sbjct: 3 EKLTEFITTRFVDCLLPQRDINTNLLYFSIQKEKLPEVVRTLKDHPEFAFSFLNDLTSID 62
Query: 65 FLS-RSNRFDVVYHFLSPK-YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+L R RF+V+Y SPK + RL++++ V EG+SVPS+ I+P A+W EREV+D+ GI
Sbjct: 63 WLGKREPRFEVIYLLRSPKLGHFRLQLRVPVGEGESVPSLSEIFPAANWPEREVFDLMGI 122
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
F GHP + R++ F GHPLRKD+P+ G
Sbjct: 123 PFSGHPRMERLIMPDNFVGHPLRKDYPLEGP 153
>gi|15606519|ref|NP_213899.1| NADH dehydrogenase I chain D [Aquifex aeolicus VF5]
gi|81343826|sp|O67335|NUCD2_AQUAE RecName: Full=NADH-quinone oxidoreductase subunit C/D 2; AltName:
Full=NADH dehydrogenase I subunit C/D 2; AltName:
Full=NDH-1 subunit C/D 2
gi|2983737|gb|AAC07298.1| NADH dehydrogenase I chain D [Aquifex aeolicus VF5]
Length = 586
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + F V++ + +V L L FL++ F++ +D+ +DF
Sbjct: 10 ERVKQEFKDEVKYYETKHTKG-FEVSHDFLKPLLKFLKERE--RFLHFVDMTCIDFPEHP 66
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
NRF VY +P+ N R+ VK +P++ ++PGA W ERE +DM+G+ FEGH +
Sbjct: 67 NRFQGVYILYNPEENERVIVKSWAK-DGKLPTVEDLWPGAKWAEREAYDMFGVVFEGHEN 125
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELH 157
LRR+ G+E +PLRKDFP+ G E+
Sbjct: 126 LRRMFMWEGYEHYPLRKDFPLQGIPEVE 153
>gi|258593445|emb|CBE69784.1| NAD(P)H-quinone oxidoreductase subunit J (NAD(P) H dehydrogenase I,
subunit J) (NDH-1, subunit J) (fragment) [NC10 bacterium
'Dutch sediment']
Length = 154
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+++ + I + F +V+ + E +D+ + L+ + L VD
Sbjct: 4 DEVIETIKSQFGDAVKASEVKGVEARIDIHPEKNYEILMTLK---GIGLDYLNCLSAVDR 60
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
++ V + + L E + S+ ++ ADW ERE +DM GI F+
Sbjct: 61 IASGELEVVYHLSSLSLPTKALVRARVPREDPIIRSVASLWGTADWHEREAFDMMGIRFD 120
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPV 170
GHPDLRRIL + G+PLRKD+ + V Y PV
Sbjct: 121 GHPDLRRILLSEDWVGYPLRKDY-----------QDERLVPYEPV 154
>gi|220916482|ref|YP_002491786.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954336|gb|ACL64720.1| NADH (or F420H2) dehydrogenase, subunit C [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 196
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ + + F V + V +V + FL +P + DL
Sbjct: 1 MTT--HEIHERLKARFGDDVGPLSEPKIDAFCVVKAERIVEVSRFLATEPGLEMDFLEDL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDM 119
VD+ + N +VVYH LS ++ + +K+ V V ++ A+WFEREV+D+
Sbjct: 59 TAVDWP-KRNVIEVVYHLLSYRHRHAIVLKVEADRAAPVVPTVEAVWKTANWFEREVYDL 117
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+G+ F GHPDLRR++ + GHPLRKD+ G
Sbjct: 118 FGVSFPGHPDLRRLMLPDDWVGHPLRKDYQEAG 150
>gi|168700386|ref|ZP_02732663.1| NADH (or F420H2) dehydrogenase, subunit C [Gemmata obscuriglobus
UQM 2246]
Length = 167
Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDD--PHCCFVNIIDLCGVDFLS 67
D + F+G+ + + L VD + L C F + D+ GVD+L
Sbjct: 5 DTLNAKFAGAFTTSSFRDNQRVL-VDAEQAPKVLFALLKCLKEECGFDFLTDIGGVDYLG 63
Query: 68 R---SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
++R+ VVY + R+ VK + + +PS+V ++ GADW EREV+DMYG+
Sbjct: 64 YAGATDRYCVVYGLTNLATGERVWVKAFANDPEPELPSVVELWKGADWMEREVYDMYGVR 123
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
F GHPD RRIL + GHPLRKD+P+ G+ E
Sbjct: 124 FPGHPDHRRILMPSEYTGHPLRKDYPLRGYGE 155
>gi|332883542|gb|EGK03825.1| hypothetical protein HMPREF9456_01892 [Dysgonomonas mossii DSM
22836]
Length = 177
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + + F V + + + + F++DD F + DL
Sbjct: 1 MALDTTVIENKMSEKFGTEVMNFRMERDIFTFEAAPAVIKEVIRFMKDDETLRFNFLTDL 60
Query: 61 CGVDFLSRSN--RFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVW 117
CGV + +F VVY + N R+RVK + + S+V ++ A+W ERE +
Sbjct: 61 CGVHYPDNDKKAQFAVVYLLHNWIDNVRVRVKTFLDGDRPYVESVVDVFAAANWMERETY 120
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
D YG+ F+GHP+L+RIL D G P+RKD P+
Sbjct: 121 DFYGVIFKGHPNLKRILNDEGMVSFPMRKDHPL 153
>gi|189346375|ref|YP_001942904.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium limicola DSM
245]
gi|189340522|gb|ACD89925.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium limicola DSM
245]
Length = 175
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
I F+ ++ + +V + + F+RD P F + L GVD+ +
Sbjct: 24 IREQFADAISDFDANETMPFFEVIETEKWPDIALFMRDHPKLKFNYLACLSGVDYPAEEK 83
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPD 129
V + R+ VK+ + + A+W ERE +DM+G+ F GHPD
Sbjct: 84 LGIVCNVESLGAFGHRIAVKVKCSREGGSIPTAAYVWHTANWHEREAYDMFGMQFAGHPD 143
Query: 130 LRRILTDYGFEGHPLRKDFPVT 151
RRIL +EG PLRKD+ V
Sbjct: 144 PRRILCPEDWEGFPLRKDYKVQ 165
>gi|319789708|ref|YP_004151341.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermovibrio
ammonificans HB-1]
gi|317114210|gb|ADU96700.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermovibrio
ammonificans HB-1]
Length = 161
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E+L + + F ++ GE+ + VD + FL+ D + ++DL VD+
Sbjct: 6 EELLNLLQREFKSAITDVTRFRGEVCVTVDKSAIKDFLRFLKLDDNFKMDMLVDLTAVDY 65
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ R VVY S + LRVK +P+++ ++ ADW EREV++M+G+ F+
Sbjct: 66 PEHTPRVVVVYQLRSLEKGHNLRVKCWAE-NDELPTVLDLWRAADWLEREVYEMFGVRFK 124
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
G L+++L + PLRKDFP+ G+ E
Sbjct: 125 GRE-LKKLLLPQKYPYFPLRKDFPLEGYEE 153
>gi|116330240|ref|YP_799958.1| NADH dehydrogenase (ubiquinone), C chain [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116123929|gb|ABJ75200.1| NADH dehydrogenase (ubiquinone), C chain [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 177
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E++ ++ F + + +V + + L+ P + + DL VD
Sbjct: 3 EEVERFLKEKFPHFLDVQEPVISNVPVFYLKAEGIVPVLNALKGHPTLNYNFLNDLTAVD 62
Query: 65 FLSRSNR-FDVVYHFLSPKYNRR-LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+L + F+V Y S + +R+K+ + +G+++PS+ +Y GA+W ERE++D++GI
Sbjct: 63 WLGKKEPRFEVNYLLRSANQSSSKIRIKVRLEDGEAIPSVTNVYKGANWPEREIYDLFGI 122
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
F GHP+L RIL F+GHPLRKDFP+ GF
Sbjct: 123 SFIGHPNLNRILMPDNFQGHPLRKDFPLEGF 153
>gi|296133535|ref|YP_003640782.1| NADH (or F420H2) dehydrogenase, subunit C [Thermincola sp. JR]
gi|296032113|gb|ADG82881.1| NADH (or F420H2) dehydrogenase, subunit C [Thermincola potens JR]
Length = 151
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 1 MVRKI--EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M + I + L + F ++ + S+ V LV + LRD+P F ++
Sbjct: 1 MAKVIDRQALVGELNKKFGDCAEIFEDNTNQ-SIKVKPDKLVEVMLELRDNPDYDFKVLM 59
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVW 117
+L VD+ F VVYH S + +L VK+ + + VPSI ++ A+ EREV+
Sbjct: 60 NLSSVDYPE---NFTVVYHLNSLTHLHKLTVKVELDKANPQVPSITSVWNAANVQEREVY 116
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
D+ GI F GHP+L+RIL F GHPLRKDF +
Sbjct: 117 DLMGIVFTGHPNLKRILLADDFVGHPLRKDFKMQ 150
>gi|289548151|ref|YP_003473139.1| NADH dehydrogenase I, D subunit [Thermocrinis albus DSM 14484]
gi|289181768|gb|ADC89012.1| NADH dehydrogenase I, D subunit [Thermocrinis albus DSM 14484]
Length = 585
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 21 RFAVNSVGELSL--DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
+ GE ++ V L+S L++ + + ID +DF + +RF VY
Sbjct: 17 KDVQVEWGEHTVSFHVSKDLLLSFLKHLKEKE--GYRHFIDFTCIDFPEKEDRFLGVYIL 74
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
+P N R+ VK G +PS+ ++P A W ERE +DM+G+ FEGH +LRR+ G
Sbjct: 75 YNPDDNERVIVKSWAKHG-KLPSVEKLWPCARWAEREAYDMFGVEFEGHENLRRMFMWEG 133
Query: 139 FEGHPLRKDFPVTGFVELH 157
+ HPLRKDFP+ GF E+
Sbjct: 134 YPYHPLRKDFPLGGFPEVE 152
>gi|322417697|ref|YP_004196920.1| NADH dehydrogenase I subunit D [Geobacter sp. M18]
gi|320124084|gb|ADW11644.1| NADH dehydrogenase I, D subunit [Geobacter sp. M18]
Length = 794
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + + +F G V N+ L+ + L L++ F + D+ VD
Sbjct: 230 LQEELQATFGGEVVLDKNAADMLTYRAPSRLVPELLKHLKERKGSPFRRLEDIACVDDSC 289
Query: 68 RSNR-----FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYG 121
R +R F V YH R+R+K + PS+ ++P ADW+ERE +DM+G
Sbjct: 290 RRDRDRFRDFTVNYHLTCFDTPGRIRIKTELEGSHPETPSVTSVFPVADWYEREAYDMFG 349
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
I F GHP+LRRIL + GHPLRK+ P Y + +
Sbjct: 350 ISFAGHPNLRRILMPPDWVGHPLRKEHPSRATEMAPYATEDAR 392
>gi|225850947|ref|YP_002731181.1| NADH-quinone oxidoreductase subunit c/d (nadhdehydrogenase i
subunit c/d) (ndh-1 subunit c/d) (Nuo3/nuo4)
[Persephonella marina EX-H1]
gi|225645974|gb|ACO04160.1| NADH-quinone oxidoreductase subunit c/d (nadhdehydrogenase i
subunit c/d) (ndh-1 subunit c/d) (Nuo3/nuo4)
[Persephonella marina EX-H1]
Length = 582
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+E+L + FS + S+ V DL++ FL++D + IDL
Sbjct: 5 ADLEEL-KLLEGKFSD--IQIEKTENFTSITVKKEDLLNALGFLKED--LGYKMFIDLTA 59
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
VD+ + RF VY SP +R+ VK S++ ++ GA W EREV+D++GI
Sbjct: 60 VDYYPQEPRFLCVYILFSPDKKKRIAVKCWAENDSVP-SVISLWKGAKWAEREVYDLFGI 118
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
FEGH +L R+ G++ HPLRKDFP G E+
Sbjct: 119 KFEGHNNLVRMFLWEGYKYHPLRKDFPKEGIQEV 152
>gi|91200365|emb|CAJ73411.1| strongly similar to NADH dehydrogenase I chain C/D [Candidatus
Kuenenia stuttgartiensis]
Length = 581
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 1 MVRKIEDLGDYIVNSFSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + + + F G + S ++ V L+ + SFL+ + + + D
Sbjct: 1 MTDS--AIVEKLKTRFGGSEITEQKTSDEFPTIWVSKDKLIDVISFLKTEVSKPYRMLYD 58
Query: 60 LCGVDFLS-------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADW 111
L +D + F VVYH LS + N +R+K+ + I ++ ADW
Sbjct: 59 LTAIDERTRAKRVEMPKGDFTVVYHLLSFERNDDIRIKVPLKGEYPSLPTITKVWSNADW 118
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+EREV+DM+GI F+GHP L+RIL +EGHPLRK+ P E+
Sbjct: 119 YEREVYDMFGIKFDGHPHLKRILMPLTWEGHPLRKEHPARA-TEM 162
>gi|39998533|ref|NP_954484.1| trifunctional NADH dehydrogenase I subunit B/C/D [Geobacter
sulfurreducens PCA]
gi|81700831|sp|Q746S4|NUBCD_GEOSL RecName: Full=NADH-quinone oxidoreductase subunit B/C/D; AltName:
Full=NADH dehydrogenase I subunit B/C/D; AltName:
Full=NDH-1 subunit B/C/D
gi|39985480|gb|AAR36834.1| NADH dehydrogenase I, B/C/D subunits [Geobacter sulfurreducens PCA]
gi|298507477|gb|ADI86200.1| NADH dehydrogenase I, B/C/D subunits [Geobacter sulfurreducens
KN400]
Length = 792
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + +F V ++ L+ L + L+ F + D+ VD
Sbjct: 228 LAGELETAFGHRVVRDDHATDMLTYRCPPELLPDVLRHLKTRSAAPFRRLEDVACVDESC 287
Query: 68 RS-----NRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYG 121
R F V YH L+ LR+K + +PS ++P ADW+ERE +DMYG
Sbjct: 288 RRERSRFPDFTVNYHLLNFHIPGHLRIKAELRGDTPEIPSATSVFPAADWYEREAFDMYG 347
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
I F GHP+LRRIL +EGHPLRK+ P Y +
Sbjct: 348 IQFAGHPNLRRILMPPDWEGHPLRKNHPFRATEMHPYTTDDAR 390
>gi|194333677|ref|YP_002015537.1| NADH (or F420H2) dehydrogenase subunit C [Prosthecochloris
aestuarii DSM 271]
gi|194311495|gb|ACF45890.1| NADH (or F420H2) dehydrogenase, subunit C [Prosthecochloris
aestuarii DSM 271]
Length = 175
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
I F+ +V + ++ D + F+RD+ F + L G+D+
Sbjct: 22 AIIREKFADAVSEFDANPTMPFFEILDTSRWSEIALFMRDNASLRFTYMACLSGMDYPED 81
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ V ++ R+ VK+ ++PS+ ++ ADW ERE +DMYG+ F GH
Sbjct: 82 AKLGIVCNLESLGEHGHRIAVKVKCDRDGGAIPSVANVWKTADWHEREAFDMYGMLFTGH 141
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVY 167
PDLRRIL +EG+PLRKD+ E+ + KV Y
Sbjct: 142 PDLRRILCPEDWEGYPLRKDY------EVQENYHGIKVPY 175
>gi|256425966|ref|YP_003126619.1| NADH (or F420H2) dehydrogenase, subunit C [Chitinophaga pinensis
DSM 2588]
gi|256040874|gb|ACU64418.1| NADH (or F420H2) dehydrogenase, subunit C [Chitinophaga pinensis
DSM 2588]
Length = 173
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + + F S+ S G +S + + FL D+ F + DL
Sbjct: 1 MSLTNDYIKQRLAEKFGESISQVEESFGTMSFTAPKDLNLKVMQFLYDEEELQFRFLTDL 60
Query: 61 CGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWD 118
V + R VVYH + + RLR+K+ + E V + ++ A+W ERE +D
Sbjct: 61 TAVHYPDRTGEELAVVYHLYNFQERIRLRLKVYTSIEDTRVFTATRLFESANWMERETYD 120
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
+G+ F GHP+L+RIL P+RK+FP+ DD+
Sbjct: 121 FFGVNFVGHPNLKRILNVDEMTYFPMRKEFPLEDQTRTDKDDE 163
>gi|284042617|ref|YP_003392957.1| NADH (or F420H2) dehydrogenase, subunit C [Conexibacter woesei DSM
14684]
gi|283946838|gb|ADB49582.1| NADH (or F420H2) dehydrogenase, subunit C [Conexibacter woesei DSM
14684]
Length = 169
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E + + +V ++ GE +L V+ + LR+ + + L GVD
Sbjct: 7 LELIAQDLRQKHPDAVLDTLHFRGEATLIVEPARARDVLIVLREK---GYRFLASLHGVD 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIF 123
+ R V Y L R+ VK+ + + VPS+V ++PGA+ EREV+DM+G+
Sbjct: 64 YYPEEPRLSVHYQLLDMDTVDRIAVKVRMPLDDAHVPSVVDLWPGANHPEREVFDMFGVV 123
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTG-FVELHYDDKV 162
F+GHPD+RRIL +EGHP R+DFP+ G V Y++
Sbjct: 124 FDGHPDMRRILMPEDYEGHPQRRDFPIGGEPVIFTYNEDK 163
>gi|319955918|ref|YP_004167181.1| NADH dehydrogenase subunit c [Nitratifractor salsuginis DSM 16511]
gi|319418322|gb|ADV45432.1| NADH dehydrogenase subunit C [Nitratifractor salsuginis DSM 16511]
Length = 264
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E L + V A +G+L + + + V+ L+ C + +L VD
Sbjct: 41 LEKLKSSVE------VLDAYIEIGQLIVHIRPEENVATLKTLK--EECGYGMCSELSAVD 92
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+L++ F++ Y L+ +R+ V + E +++ SIV +Y A + ERE++DM+GI
Sbjct: 93 YLAQDGEFEIFYQLLNLDEAKRICVLTWIKEDQAIESIVPLYAMAKFAEREMYDMFGIVV 152
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTG 152
HP L+RI+ +EGHPLRK +P+ G
Sbjct: 153 NNHPYLKRIIMPDDWEGHPLRKTYPLQG 180
>gi|307069593|ref|YP_003878070.1| putative NADH:ubiquinone oxidoreductase, chain C [Candidatus
Zinderia insecticola CARI]
gi|306482853|gb|ADM89724.1| putative NADH:ubiquinone oxidoreductase, chain C [Candidatus
Zinderia insecticola CARI]
Length = 189
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/153 (37%), Positives = 98/153 (64%), Gaps = 6/153 (3%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN----RFDVVYHFLSP 81
++++ V+ + + + S L+++ F +ID +D+L+ + RF ++ + LS
Sbjct: 25 KFKQINILVNYINYLYILSILKNNKKFKFKTLIDFFCIDYLNYKSKKKFRFQIILNLLSI 84
Query: 82 KYNRRLRVKIAV--AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
KYN R+R+KI + + + +I ++ ++W+ERE +DMYGI F+GH +L+RILTDY F
Sbjct: 85 KYNMRIRIKIFLLNKKNPYLFTINNLWKSSNWYEREAYDMYGINFKGHYNLKRILTDYNF 144
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVEL 172
G P+RKDFP++GF EL Y++K K V Y+ + L
Sbjct: 145 IGFPMRKDFPLSGFYELKYNNKKKNVFYKKINL 177
>gi|116329152|ref|YP_798872.1| NADH dehydrogenase (ubiquinone), C chain [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116121896|gb|ABJ79939.1| NADH dehydrogenase (ubiquinone), C chain [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
Length = 177
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E++ ++ F + + +V + + L+ P + + DL VD
Sbjct: 3 EEVERFLKEKFPHFLDVQEPVISNVPVFYLKAEGIVPVLNALKGHPTLNYNFLNDLTAVD 62
Query: 65 FLSRSNR-FDVVYHFLSPKYNRR-LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+L + F+V Y S + +R+K+ + +G+++PS+ +Y GA+W ERE++D++GI
Sbjct: 63 WLGKKEPRFEVNYLLRSANQSSSKIRIKVRLEDGEAIPSVTNVYKGANWPEREIYDLFGI 122
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
F GHP+L RIL F+GHPLRKDFP+ GF
Sbjct: 123 SFIGHPNLDRILMPDNFQGHPLRKDFPLEGF 153
>gi|152993806|ref|YP_001359527.1| NADH dehydrogenase subunit C [Sulfurovum sp. NBC37-1]
gi|151425667|dbj|BAF73170.1| NADH-quinone oxidoreductase, chain C [Sulfurovum sp. NBC37-1]
Length = 261
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+V + + + SVG+L + + D + L+ C + + VD+L++
Sbjct: 40 VVKALGRKAKESYVSVGQLVIHIKATDNFDVMKTLK--ETCGYTQCSEQSAVDYLAQDGE 97
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F++ + L+ +R+RV + E +++ SI ++ A++ ERE++DM+GI HP L+
Sbjct: 98 FELFWQLLNITEAKRVRVTTRIKENEAIESIQPLFRSANFAEREMFDMFGIKVNNHPFLK 157
Query: 132 RILTDYGFEGHPLRKDFPVTG 152
RIL +EGHPL K +P+ G
Sbjct: 158 RILMPDDWEGHPLLKTYPLHG 178
>gi|220904928|ref|YP_002480240.1| NADH (or F420H2) dehydrogenase subunit C [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869227|gb|ACL49562.1| NADH (or F420H2) dehydrogenase, subunit C [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 186
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ +E + D + F V G+L++ V G ++ L ++LRD + +
Sbjct: 1 MESLE-IADRLRGFFPEEVLDVREFRGQLAVLVRSGRILELLAYLRDVLDMRHLQALCGV 59
Query: 62 GVDFLSRSN--RFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWD 118
+ F+VVYH S + +R++ V + + + S V ++ GA+W ERE WD
Sbjct: 60 DNSRRNEPGLSPFEVVYHLYSIRQRHGIRLRAMVDDPEEGIDSAVPLWTGANWLERETWD 119
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV----TGFVE 155
+ GI F GHPDLRRIL ++GHPLRK++PV G E
Sbjct: 120 LVGIHFRGHPDLRRILLPDDWQGHPLRKEYPVKIPARGHEE 160
>gi|78221378|ref|YP_383125.1| trifunctional NADH dehydrogenase I subunit B/C/D [Geobacter
metallireducens GS-15]
gi|123572941|sp|Q39ZC4|NUBCD_GEOMG RecName: Full=NADH-quinone oxidoreductase subunit B/C/D; AltName:
Full=NADH dehydrogenase I subunit B/C/D; AltName:
Full=NDH-1 subunit B/C/D
gi|78192633|gb|ABB30400.1| NADH dehydrogenase subunit D / NADH dehydrogenase subunit C / NADH
dehydrogenase subunit B [Geobacter metallireducens
GS-15]
Length = 791
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI-----IDLCG 62
L + F G V + L+ + + L+ F + +D
Sbjct: 227 LAGELETIFGGRVAVEQAATDMLTYRCPPELVPEVLRHLKSRSSAPFRRLEDVVCVDESC 286
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYG 121
R F V YH L+ LR+K + +PS G++P ADW+ERE +DMYG
Sbjct: 287 RRERERFPDFTVNYHLLNFDIPGHLRIKTELMGETPELPSATGVFPAADWYEREAFDMYG 346
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
I F GHP+LRRIL +EGHPLRK+ P Y +
Sbjct: 347 IRFAGHPNLRRILMPPDWEGHPLRKEHPFRATEMPPYTTDDAR 389
>gi|225847873|ref|YP_002728036.1| NADH-quinone oxidoreductase subunits chi/delta
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644389|gb|ACN99439.1| NADH-quinone oxidoreductase subunit c/d (nadhdehydrogenase i
subunit c/d) (ndh-1 subunit c/d) [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 581
Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 10 DYIVNSFSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
D + ++F + + NS +S++++ LV ++++ DP F ID VD+
Sbjct: 10 DNLKSTFPSLKILKSENS---VSVEIEKEKLVDFLNYIKQDPEYSFKMFIDFTVVDYPFH 66
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
RF VY SP +N R+ VK +++PS+ ++ GA W ERE +DM+GI FEGH
Sbjct: 67 KPRFQGVYILYSPDFNERIIVKTWT--DETLPSLTPLWKGAKWAEREAYDMFGIKFEGHE 124
Query: 129 DLRRILTDYGFEGHPLRKDFPVTG 152
+L R+ + +PLRKDFP G
Sbjct: 125 NLVRMFLWETYPYYPLRKDFPKEG 148
>gi|288818717|ref|YP_003433065.1| NADH dehydrogenase chain D [Hydrogenobacter thermophilus TK-6]
gi|288788117|dbj|BAI69864.1| NADH dehydrogenase chain D [Hydrogenobacter thermophilus TK-6]
gi|308752304|gb|ADO45787.1| NADH dehydrogenase I, D subunit [Hydrogenobacter thermophilus TK-6]
Length = 585
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 13 VNSFSGSVRFAVNSVGE--LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ + + + L++ L+ L++ + + ID +DF +
Sbjct: 9 RERLKFNFKELKVEADQKSVRLEIPKDRLLDFLRHLKERE--GYKHFIDFTCIDFPEHPH 66
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
RF VY +P N R+ VK G ++PS+ ++ A W ERE +DM+G+ FEGH +L
Sbjct: 67 RFQGVYILYNPDENERVIVKSWAEGG-TLPSLEKLWACARWAEREAYDMFGVVFEGHENL 125
Query: 131 RRILTDYGFEGHPLRKDFPVTGFVELH 157
RR+ G+ PLRKDFP+ G E+
Sbjct: 126 RRMFMWEGYPHFPLRKDFPLGGIPEVE 152
>gi|284040873|ref|YP_003390803.1| NADH (or F420H2) dehydrogenase, subunit C [Spirosoma linguale DSM
74]
gi|283820166|gb|ADB42004.1| NADH (or F420H2) dehydrogenase, subunit C [Spirosoma linguale DSM
74]
Length = 163
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+L D + F +++ ++ + L V LV +C FLR+D F + + +D
Sbjct: 4 SELTDLLATQFGAAIQPNTQNL-QPYLSVPVEQLVDICQFLRNDERLFFDLLACITAIDN 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV------PSIVGIYPGADWFEREVWDM 119
+N +VVY+F S Y L +K+ V + PS+ ++ ADW ERE +D+
Sbjct: 63 GPDANTMEVVYNFTSIPYEHNLMLKVMVPRKQENRKLPSVPSLAHVWRTADWHEREAYDL 122
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHPDLRRIL + GHPLR D+
Sbjct: 123 VGIHFDGHPDLRRILLPTDWVGHPLRADY 151
>gi|170727206|ref|YP_001761232.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shewanella
woodyi ATCC 51908]
gi|218534244|sp|B1KJV0|NUOCD_SHEWM RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|169812553|gb|ACA87137.1| NADH dehydrogenase I, D subunit [Shewanella woodyi ATCC 51908]
Length = 598
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ +E L + + + S SV + G L+L +D L+ L+ P F ++DL
Sbjct: 21 MLTLEMLPE-LKSLLSDSVEQQICIDGILTLWIDKTQLIPALRLLKTLPQ-PFDLLLDLF 78
Query: 62 GVDFLS-------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFE 113
GVD + F +VY S N+ +R+K+A+A + +PSI +P A+W+E
Sbjct: 79 GVDERLRLDKDKLPAQDFTLVYQLCSINRNQDIRLKVALANDQAEIPSITAFWPSANWYE 138
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
RE WDM+GI F HP+L R+L F+GHPLRK+FP + ++ + +
Sbjct: 139 REAWDMFGIIFSDHPNLYRLLLPPTFKGHPLRKEFPCRATETEAFSLDDER-----LAIE 193
Query: 174 QEHRDYD 180
QE +D
Sbjct: 194 QEALKFD 200
>gi|303248401|ref|ZP_07334661.1| NADH dehydrogenase I, D subunit [Desulfovibrio fructosovorans JJ]
gi|302490199|gb|EFL50117.1| NADH dehydrogenase I, D subunit [Desulfovibrio fructosovorans JJ]
Length = 790
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG----VDFLSRSNR 71
F +V +++ + V + + + L+ + F + DL + + +
Sbjct: 234 FGEAVTPTPDAIDMPTYAVAPERITEVLAHLKRNAPTRFERLEDLTAVDETMRRTPQGHE 293
Query: 72 FDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
VVY S +R+ A+ ++ + G++P A W+ERE +M+G+ F GHPD
Sbjct: 294 ASVVYTLTSLSSPGMVRLTCALPTRDSAIATATGVWPSASWYEREAAEMFGLRFTGHPDP 353
Query: 131 RRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RR+LT + GHPLRKD+ + + + + PV+
Sbjct: 354 RRLLTHRDWVGHPLRKDYEGRATNMPPFTEDDCRRL-EPVD 393
>gi|110598465|ref|ZP_01386736.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium ferrooxidans
DSM 13031]
gi|110339915|gb|EAT58419.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium ferrooxidans
DSM 13031]
Length = 172
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
I F +V + +V D + F+RD F + L GVD+
Sbjct: 19 AIIREQFGSAVSEFDGNATMPFFEVLDASLWQDIALFMRDHAKLKFNYMACLSGVDYFPE 78
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGH 127
V RL VK++ V + A+W ERE +DM+GI F GH
Sbjct: 79 EKLGIVCNLESLGALGHRLAVKVSCPRSGGAIPTVSCVWHTANWHEREAYDMFGIDFTGH 138
Query: 128 PDLRRILTDYGFEGHPLRKDFPVT 151
PD RRIL +EG PLRKD+ V
Sbjct: 139 PDFRRILCPDDWEGFPLRKDYKVQ 162
>gi|222054362|ref|YP_002536724.1| NADH dehydrogenase I, D subunit [Geobacter sp. FRC-32]
gi|221563651|gb|ACM19623.1| NADH dehydrogenase I, D subunit [Geobacter sp. FRC-32]
Length = 792
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL-----CG 62
L + F V+ ++ L+ + + L+ F + D+
Sbjct: 228 LAGELEGLFGEQVKVDPDATDMLTYRCPPELVPEVLRHLKKRSGNAFARLEDIAAVDDSC 287
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYG 121
+ F V YH L +R+K ++ +P++ G++P A+W+EREV+DMYG
Sbjct: 288 RRQREKFQDFTVNYHLLCFDTPGHIRIKTEISGATPQLPTVTGLFPAANWYEREVFDMYG 347
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY--DDKVK 163
I GHP+LRRIL ++GHPLRK+ P Y DD K
Sbjct: 348 IHVAGHPNLRRILMPEEWQGHPLRKEHPFRATEMPAYTLDDARK 391
>gi|24213593|ref|NP_711074.1| NADH dehydrogenase (ubiquinone) chain C [Leptospira interrogans
serovar Lai str. 56601]
gi|24194385|gb|AAN48092.1| NADH dehydrogenase (ubiquinone) chain C [Leptospira interrogans
serovar Lai str. 56601]
Length = 178
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + ++ F + + +VS+ + L++DP + + DL VD
Sbjct: 3 EKVESFLKEKFPHFLDSQEEVISNVPVFFLKVEGIVSVLTALKNDPTLHYNFLNDLTAVD 62
Query: 65 FLSRSNR-FDVVYHFLS-PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+L + F+V Y S K + ++R+K+ + +G+SVPSI ++ GADW EREV+D++GI
Sbjct: 63 WLGKKEPRFEVNYLLRSENKASSKIRIKVRLEDGESVPSITSVFKGADWPEREVYDLFGI 122
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
F GHP+L RIL F+GHPLRKDFP+ GF
Sbjct: 123 SFIGHPNLDRILMPDNFQGHPLRKDFPLEGF 153
>gi|45658577|ref|YP_002663.1| NADH dehydrogenase subunit I C [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45601821|gb|AAS71300.1| NADH dehydrogenase I subunit C [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 178
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 6 EDLGDYIVNSFSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + ++ F + + +V + + L++DP + + DL VD
Sbjct: 3 EKVESFLKEKFPHFLDFQEEVISNVPVFFLKVEGIVPVLTALKNDPTLHYNFLNDLTAVD 62
Query: 65 FLSRSNR-FDVVYHFLS-PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+L + F+V Y S K + ++R+K+ + +G+SVPSI ++ GA+W EREV+D++GI
Sbjct: 63 WLGKKEPRFEVNYLLRSENKASSKIRIKVRLEDGESVPSITSVFKGANWPEREVYDLFGI 122
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
F GHP+L RIL F+GHPLRKDFP+ GF
Sbjct: 123 SFIGHPNLDRILMPDNFQGHPLRKDFPLEGF 153
>gi|332830190|gb|EGK02818.1| hypothetical protein HMPREF9455_01068 [Dysgonomonas gadei ATCC
BAA-286]
Length = 177
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + I F V + + + F+++D F + DL
Sbjct: 1 MALETTVIESKISEKFGSEVLNFRMEHDIFVFEATPAVIKDVIRFMKEDETLRFNFMTDL 60
Query: 61 CGVDFLSRSN--RFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
CGV + +F VVY + N R+R+K + + + ++V ++ A+W ERE +
Sbjct: 61 CGVHYPDNDKSAQFAVVYLLHNWIDNVRVRIKTYLNGDEPEIDTLVEVFATANWMERETY 120
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
D YGI F+GHP+L+RIL D G P+RK+FP+
Sbjct: 121 DFYGIIFKGHPNLKRILNDEGMISFPMRKEFPL 153
>gi|283850904|ref|ZP_06368190.1| NADH dehydrogenase I, D subunit [Desulfovibrio sp. FW1012B]
gi|283573827|gb|EFC21801.1| NADH dehydrogenase I, D subunit [Desulfovibrio sp. FW1012B]
Length = 790
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS---- 67
+ F + ++ + V ++ + + L+ F + DL +D +
Sbjct: 230 LAAVFGPDITLTPDAGDMPTYVVAPSRIIEVLAHLKHKAPTRFERLEDLTAIDETARRDR 289
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ VVY S +R+ + ++ + G++P ADW+ERE +M+G+ F G
Sbjct: 290 PGHDATVVYTLTSLSTPGMVRLSCPLPTRDAAIDTATGLWPSADWYEREAAEMFGLSFTG 349
Query: 127 HPDLRRILTDYGFEGHPLRKDF 148
HPD RR+LT + GHPLRK++
Sbjct: 350 HPDPRRLLTHRDWTGHPLRKEY 371
>gi|225849708|ref|YP_002729942.1| NADH-quinone oxidoreductase subunit c/d (nadhdehydrogenase i
subunit c/d) (ndh-1 subunit c/d) [Persephonella marina
EX-H1]
gi|225644868|gb|ACO03054.1| NADH-quinone oxidoreductase subunit c/d (nadhdehydrogenase i
subunit c/d) (ndh-1 subunit c/d) [Persephonella marina
EX-H1]
Length = 577
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ F + + L+V +L+ FL++DP F ID +D +
Sbjct: 9 AKRLEEKF--DFVKVLENEQATVLEVPKENLIQFLKFLKEDPDYLFKMFIDWTIIDHGKK 66
Query: 69 -SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
RF V SP+Y R+ VK +++P++ ++ GA W ERE WDM+GI FEGH
Sbjct: 67 ADPRFQGVVILFSPEYKERIIVKTWAT-DETLPTLTTLWSGAKWAEREAWDMFGIKFEGH 125
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
L R+ G+ HPLRKDFPV G E+
Sbjct: 126 DHLVRMFLWEGYPYHPLRKDFPVRGIEEVE 155
>gi|313903493|ref|ZP_07836884.1| NADH (or F420H2) dehydrogenase, subunit C [Thermaerobacter
subterraneus DSM 13965]
gi|313466314|gb|EFR61837.1| NADH (or F420H2) dehydrogenase, subunit C [Thermaerobacter
subterraneus DSM 13965]
Length = 218
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 10 DYIVNSFSGSVRF--AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ +F A + G + V + + FLRDDP F + DLCGVD+
Sbjct: 64 ARLREAFPDVSFDPVAATADGCPIVTVPAERWLEVARFLRDDPQLGFDYLSDLCGVDY-- 121
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ VVY ++RRL VK+ V++ + VPS+V ++PGA W ERE +DM+G+ F G
Sbjct: 122 -KDALQVVYQLRGVGHDRRLTVKVNVSKEQPEVPSVVEVWPGAGWHEREAFDMFGVRFSG 180
Query: 127 HPDLRRILTDYGFEG--HPLRKDF 148
HPDLRRIL PLRKDF
Sbjct: 181 HPDLRRILMPPWTPDDVFPLRKDF 204
>gi|317121158|ref|YP_004101161.1| NADH (or F420H2) dehydrogenase, subunit C [Thermaerobacter
marianensis DSM 12885]
gi|315591138|gb|ADU50434.1| NADH (or F420H2) dehydrogenase, subunit C [Thermaerobacter
marianensis DSM 12885]
Length = 218
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 10 DYIVNSFSGSVRF--AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ +F A + G + V + + FLRDDP F + DLCGVD+
Sbjct: 64 ARLREAFPDLTFEPVAATADGGPIVTVPVDRWLEVARFLRDDPQLGFDYLSDLCGVDY-- 121
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ VVY ++RRL VK+ V + VPS+V ++PGA W ERE +DM+GI F G
Sbjct: 122 -KDALQVVYQLRGVGHDRRLTVKVNVGKDDPEVPSVVEVWPGAGWHEREAFDMFGIRFSG 180
Query: 127 HPDLRRILTDYGFEG--HPLRKDF 148
HPDLRRIL PLRKDF
Sbjct: 181 HPDLRRILMPPWTPDDVFPLRKDF 204
>gi|255036235|ref|YP_003086856.1| NADH (or F420H2) dehydrogenase, subunit C [Dyadobacter fermentans
DSM 18053]
gi|254948991|gb|ACT93691.1| NADH (or F420H2) dehydrogenase, subunit C [Dyadobacter fermentans
DSM 18053]
Length = 180
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+++ D + F + +L V + ++CSFL +D F + + +D
Sbjct: 4 QEITDIVTGRFPEYTIVPDTRNPQPALMVPAAGIAAICSFLHEDERLYFDFLACITAIDN 63
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS------VPSIVGIYPGADWFEREVWDM 119
+ ++ +++Y+ S Y L +K +P++ I+ ADW ERE +D+
Sbjct: 64 GAAADSMELIYNLTSIPYGIDLTLKTVFPRNTEGVALPSIPTVSHIWRTADWHEREAYDL 123
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE---LHYDD 160
GI FEGHPDLRRIL +EGHPLRKD+ + Y+D
Sbjct: 124 IGIRFEGHPDLRRILLPEDWEGHPLRKDYDAQERYHGIYVRYED 167
>gi|298243463|ref|ZP_06967270.1| NADH (or F420H2) dehydrogenase, subunit C [Ktedonobacter racemifer
DSM 44963]
gi|297556517|gb|EFH90381.1| NADH (or F420H2) dehydrogenase, subunit C [Ktedonobacter racemifer
DSM 44963]
Length = 234
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 6/138 (4%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ V L L VD +LV++C F+RD F ++ + GVD L
Sbjct: 31 LSQITGKPVNATTLKGDFLGLVVDKENLVAVCRFVRD--QLGFDLLVCVSGVDMLDH--- 85
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
+ VYH S + L++K+ + K V S+V +YP A+W ERE +DMYGI F GHPDL
Sbjct: 86 LESVYHLRSTTRAQLLQIKVRIEREKPEVDSVVSVYPTANWLERETYDMYGIRFAGHPDL 145
Query: 131 RRILTDYGFEGHPLRKDF 148
RR+L D FEG+PL KDF
Sbjct: 146 RRMLLDDDFEGYPLLKDF 163
>gi|162457345|ref|YP_001619712.1| NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So ce 56']
gi|161167927|emb|CAN99232.1| NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So ce 56']
Length = 182
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 6 EDLGDYIVNSFS-GSVRF---AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
E + + +V + L V + +C LR+ P F + +
Sbjct: 4 EAIFQALQAKLGEDAVFDFHPVSAKDRDAWLQVAPAKIEPVCRLLREAPELDFDYLECIT 63
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
GVD+ VVYH S R+ +K+ + V ++V ++ A+W ERE +D+
Sbjct: 64 GVDYPDLKK-IVVVYHIYSYAKKHRVVLKVFLDRESPAVSTLVDVWSAANWQERECFDLL 122
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKD 147
G+ FEGHPDLRR+L +EGHPLRKD
Sbjct: 123 GVRFEGHPDLRRLLLPDDWEGHPLRKD 149
>gi|325104084|ref|YP_004273738.1| NADH dehydrogenase subunit C [Pedobacter saltans DSM 12145]
gi|324972932|gb|ADY51916.1| NADH dehydrogenase subunit C [Pedobacter saltans DSM 12145]
Length = 166
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ IV + +V + G + +L ++ + +C LRD+ + F + L GVD
Sbjct: 4 QEIKQLIVENIGKNVIVGEETTGLQPALIINPDYITEVCLELRDNKNTWFDFLSSLSGVD 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG------KSVPSIVGIYPGADWFEREVWD 118
+ S +F VVYH S +L +K+ S+ I+ A+W ERE +D
Sbjct: 64 YGVESGKFGVVYHLSSIIKKHQLVLKVFRENDRNEQNLPVFKSVSSIWRTAEWHERETFD 123
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
++GIFFE HPDLRRIL ++G+PLRKD+
Sbjct: 124 LFGIFFESHPDLRRILLPDDWKGYPLRKDY 153
>gi|78188614|ref|YP_378952.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium
chlorochromatii CaD3]
gi|78170813|gb|ABB27909.1| NADH dehydrogenase subunit C [Chlorobium chlorochromatii CaD3]
Length = 172
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 11 YIVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
I F V + +V D + F+R+ P F + L GVD+ + +
Sbjct: 20 LIKEEFGDGVSEFDANETMPFFEVVDVERWTEIALFMREHPKLRFNYMACLSGVDYPADN 79
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHP 128
V ++N R+ VK+ V + A+W ERE +DMYG+ F GHP
Sbjct: 80 KLGIVCNLESLGEHNHRIAVKVKCDREGGAIPSVAYVWHTANWHEREAFDMYGMTFTGHP 139
Query: 129 DLRRILTDYGFEGHPLRKDFPVT 151
D +RIL +EGHPLRKD+ V
Sbjct: 140 DFKRILCPDDWEGHPLRKDYKVQ 162
>gi|291280355|ref|YP_003497190.1| NADH-quinone oxidoreductase subunit C [Deferribacter desulfuricans
SSM1]
gi|290755057|dbj|BAI81434.1| NADH-quinone oxidoreductase, C subunit [Deferribacter desulfuricans
SSM1]
Length = 168
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+D+ Y + G V L VD + ++ F I+D+ +
Sbjct: 8 DDIVKYFSEKYPGKVSG-KVEFKCNFLTVDKSIFKDVLREMK--EKFSFKYIVDVVATHW 64
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+R +FDVVY+ S + N R+ VK+ + + + ++ I+ GA++ ERE +D+ G+ FE
Sbjct: 65 PNRDMKFDVVYNIYSIENNIRVFVKVMIP-DEKIETVTDIWKGANFMEREQYDLVGVVFE 123
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVT 151
GHPDLRRIL FEGHPLRKDFP+
Sbjct: 124 GHPDLRRILLPDFFEGHPLRKDFPLK 149
>gi|226227807|ref|YP_002761913.1| NADH-quinone oxidoreductase chain C [Gemmatimonas aurantiaca T-27]
gi|226090998|dbj|BAH39443.1| NADH-quinone oxidoreductase chain C [Gemmatimonas aurantiaca T-27]
Length = 174
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+R G L L++ L+++ LRD F +D+ VD+L ++ RF+VVYHF
Sbjct: 27 IRSLGVQHGILVLELLPEALLTVAHRLRD--TFGFDLFLDVTAVDWLGQTPRFEVVYHFY 84
Query: 80 SPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
+ ++ R+R+K+ V E V ++ +Y A + ERE DMYGI F G+ DLR IL G
Sbjct: 85 ATAHHVRVRLKVRVEESLPEVETLTSLYGSAGYMERECHDMYGIVFRGNADLRPILLYEG 144
Query: 139 FEGHPLRKDFPVTGFVELHYDDKVKKVVYRP 169
F GHPLRKD+P + V YRP
Sbjct: 145 FVGHPLRKDYPKQ--------QEQPLVPYRP 167
>gi|118474354|ref|YP_891364.1| NADH-quinone oxidoreductase chain c/d [Campylobacter fetus subsp.
fetus 82-40]
gi|218528036|sp|A0RMD1|NUOCD_CAMFF RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|118413580|gb|ABK82000.1| NADH-quinone oxidoreductase chain c/d [Campylobacter fetus subsp.
fetus 82-40]
Length = 561
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 14 NSFSGS--VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
FS V + G LS+ ++ D+ F+RD+ F + D+ VD L
Sbjct: 3 EKFSSKFNVLKHSTTNGLLSVQINPNDIYEAVLFVRDN--IGFEILADIVCVDNLYIDKE 60
Query: 72 FDVVYHFLSPKYNRR-LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
+++ K + L + I + +SV S+ IY A+W ERE +D +G+ FE HP+L
Sbjct: 61 KRFSLYYIFRKISSENLCIYIDIDINQSVKSVESIYKSANWGERECFDQFGVKFENHPNL 120
Query: 131 RRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
+RIL F+G+PLRKD+P+T + L+ D
Sbjct: 121 KRILNHKDFQGYPLRKDYPITKYQVLYESDD 151
>gi|312129418|ref|YP_003996758.1| NADH dehydrogenase subunit c [Leadbetterella byssophila DSM 17132]
gi|311905964|gb|ADQ16405.1| NADH dehydrogenase subunit C [Leadbetterella byssophila DSM 17132]
Length = 163
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + +V V + L + DL S+C+FL P F + + VD
Sbjct: 9 IAQTLEKELGIAV-EYHGDVLQPFLQIKSEDLHSICTFLNKTPGFYFDFLHCITCVDNGP 67
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ D++YH S + +K+ + PS+ ++ ADW ERE++D++G+ F G
Sbjct: 68 SAGTLDLIYHLSSLPLEHGIILKMTLPREDSEAPSLTELWKTADWHEREIFDLFGVKFTG 127
Query: 127 HPDLRRILTDYGFEGHPLRKDF 148
HPDLRRIL ++GHPLRKD+
Sbjct: 128 HPDLRRILLPADWQGHPLRKDY 149
>gi|115378562|ref|ZP_01465717.1| NADH-quinone oxidoreductase chain 5 [Stigmatella aurantiaca
DW4/3-1]
gi|115364434|gb|EAU63514.1| NADH-quinone oxidoreductase chain 5 [Stigmatella aurantiaca
DW4/3-1]
Length = 181
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 1 MVRKIEDLG-DYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M R + D + +V G + L ++ +FL++DP F +
Sbjct: 1 MGRPLSTFALDRVSAHLPEAVAERYVDRAGGAWAVIHAQHLPAVVAFLKNDPELNFKLFV 60
Query: 59 DLCGVDFL---SRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFER 114
GVD L RF+VVY S N +R+K+ V VPS+V ++ GA+W+ER
Sbjct: 61 SADGVDRLHLAENDPRFEVVYFLRSLTLNEHVRLKVRVTETNPEVPSLVPLFKGANWWER 120
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
VWD YGI F GHPDLRRIL F+GHPLRKD+ +
Sbjct: 121 FVWDFYGIRFTGHPDLRRILMYEEFQGHPLRKDYALR 157
>gi|189502443|ref|YP_001958160.1| hypothetical protein Aasi_1087 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497884|gb|ACE06431.1| hypothetical protein Aasi_1087 [Candidatus Amoebophilus asiaticus
5a2]
Length = 166
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 6 EDLGDYIVNSFSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
ED+ + +V ++ V + +C L+++P F + + +D
Sbjct: 4 EDIVKLLQEKLKPAVNIETDMGATPQAIIVPAAHIAQICQILQENPSMYFDYLACITALD 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS------VPSIVGIYPGADWFEREVWD 118
+ +V+Y+ S YN +L +K++V K +P++ ++ A+W ERE ++
Sbjct: 64 NGFEAGTLEVIYNLYSISYNFQLMIKVSVTRNKPGEPLPSIPTVSHLWQAANWHEREAYE 123
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ GI F GHPDLRRIL +EGHPLR D+
Sbjct: 124 LVGIHFTGHPDLRRILLPVDWEGHPLRTDY 153
>gi|283780215|ref|YP_003370970.1| NADH (or F420H2) dehydrogenase, subunit C [Pirellula staleyi DSM
6068]
gi|283438668|gb|ADB17110.1| NADH (or F420H2) dehydrogenase, subunit C [Pirellula staleyi DSM
6068]
Length = 176
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L D + F + A + ++V + + FL+ D + VD+
Sbjct: 5 TLLDRLKKQFGDKIVGANFDAIDPWIEVAPEAIRDVSKFLKVDAELQLNFCNCITAVDYF 64
Query: 67 SRSN----------RFDVVYHFLSPKYNRRLRVKIAVA--------EGKSVPSIVGIYPG 108
++VYH S L +K+ + + VP++ I+
Sbjct: 65 EPDPKKAAKATFSPHIELVYHLSSITKKHSLVLKVMLPRWKDDVPGQCPQVPTVSDIWRT 124
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
ADW EREV+D+ GI F GHPDLRRIL + G+PLRKD+ +
Sbjct: 125 ADWHEREVFDLSGIDFVGHPDLRRILCPEDWIGYPLRKDYEM 166
>gi|304312242|ref|YP_003811840.1| NADH dehydrogenase I, chain CD [gamma proteobacterium HdN1]
gi|301797975|emb|CBL46197.1| NADH dehydrogenase I, chain CD [gamma proteobacterium HdN1]
Length = 616
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGEL-SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF- 65
L ++ F +V A +V ++ ++ V D++ + SF + F + DL +D
Sbjct: 41 LIAELLQRFGAAVFVAQLTVDDIPTVWVQRKDVLDVLSFFCKEISSSFSMLYDLTVIDER 100
Query: 66 ------LSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWD 118
L + F VVY LS + N+ LR+KI + E PS+V ++ A+W+ERE WD
Sbjct: 101 LRKHRELQPPSDFTVVYTLLSVERNQFLRIKIPLQAEDAVTPSVVRLWKNANWYEREAWD 160
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
M+G+ FEGHP+LRRIL ++GH LRKD P E+
Sbjct: 161 MFGVRFEGHPNLRRILLPPTWQGHALRKDHPARA-TEM 197
>gi|168698927|ref|ZP_02731204.1| NADH (or F420H2) dehydrogenase, subunit C [Gemmata obscuriglobus
UQM 2246]
Length = 177
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-- 67
+ + F + A + + V+ +LV++C FLRDDP F + D+ GVD+L
Sbjct: 8 ALLQSQFGSVITGAKADALDPFVTVEPAELVNVCVFLRDDPRLKFALLNDITGVDYLEPD 67
Query: 68 --------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS---------VPSIVGIYPGAD 110
+V+YH S + R V VPS+ G++ AD
Sbjct: 68 PKKVAKAGFEPHVEVLYHLSSFAFPGRRFTLKLVLPRWKSDQPGQLPEVPSVAGVWKTAD 127
Query: 111 WFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD--FPV 150
W EREV+D+ G+FF GHP+L RIL + + GHPLRKD FP+
Sbjct: 128 WHEREVYDLVGVFFTGHPNLVRILLNDDWVGHPLRKDYEFPL 169
>gi|189500537|ref|YP_001960007.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium
phaeobacteroides BS1]
gi|189495978|gb|ACE04526.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium
phaeobacteroides BS1]
Length = 175
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDC-GDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L + + +F +V + +V + FLRDDP + L GVD+
Sbjct: 20 LWEIVHAAFPDAVSALDENPFMPFFEVQQTERWREIALFLRDDPKLRCNYMACLSGVDYP 79
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
V + ++ VK+ +PS+ ++ ADW ERE +DMYG+ F
Sbjct: 80 EEGKLGIVCNLESVGVHAHKIAVKVYCDREDGVIPSVARVWKTADWHEREAFDMYGMTFS 139
Query: 126 GHPDLRRILTDYGFEGHPLRKDF 148
GHPDLRRIL + G+PLRKD+
Sbjct: 140 GHPDLRRILCPEDWTGYPLRKDY 162
>gi|254282227|ref|ZP_04957195.1| NADH dehydrogenase i, b/c/d subunit [gamma proteobacterium NOR51-B]
gi|219678430|gb|EED34779.1| NADH dehydrogenase i, b/c/d subunit [gamma proteobacterium NOR51-B]
Length = 592
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 10 DYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG------ 62
+ ++ + + + G ++ V L+ + LR F ++D+ G
Sbjct: 24 EELLATLPDAGMAQQITADGTPTVWVPRERLLDVLRHLRP----GFPMLLDVFGIDERLR 79
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYG 121
+ + F VVYH S + RVK +V+E VPS ++P A+W+ERE WDM+G
Sbjct: 80 QNKPLPAQDFTVVYHLFSVERREEFRVKASVSEADAVVPSATPVWPAANWYEREAWDMFG 139
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH---YDDKVKKVVYRPVELMQE 175
I F GHP+LRRI+ +EG LRKD P E+ D+ + V + E
Sbjct: 140 IEFSGHPNLRRIILPPTWEGFALRKDHPARA-TEMEPFSLDEDKQVVEQEALRFRPE 195
>gi|313681395|ref|YP_004059133.1| NADH dehydrogenase subunit c [Sulfuricurvum kujiense DSM 16994]
gi|313154255|gb|ADR32933.1| NADH dehydrogenase subunit C [Sulfuricurvum kujiense DSM 16994]
Length = 268
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ I SF V A VG++ + ++ D + +++ + + +L +D+L++
Sbjct: 42 EAIKASF--DVLDAYIQVGQMVVIINAADNYGVIEMMKN--ELGYNQLSELSAIDWLAQE 97
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
+F++ Y LS +R+R+K + E +S+ S+ ++ ADW ERE++DM+G+ HP
Sbjct: 98 GKFEIFYQMLSMNKRKRVRIKCKIDEKESIQSVSSLFRSADWSEREMYDMFGVVINNHPY 157
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
++RIL +EG PLRK +P+ G + + K
Sbjct: 158 MKRILMPDDWEGFPLRKTYPLQGDEFAQWYEVDK 191
>gi|237752490|ref|ZP_04582970.1| trifunctional NADH dehydrogenase I subunit B/C/D [Helicobacter
winghamensis ATCC BAA-430]
gi|229375979|gb|EEO26070.1| trifunctional NADH dehydrogenase I subunit B/C/D [Helicobacter
winghamensis ATCC BAA-430]
Length = 267
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
+ + G L + V+ + L+ + + +L +DFL F++ Y
Sbjct: 49 KIMESYIERGMLVVWVEKDSIFRALEALKT---MGYEILSELSAMDFLESKGGFEIFYQL 105
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
LS + +RLRVK + +G+ + S+ ++ A+W ERE++DM+GI HP +RIL
Sbjct: 106 LSLQKVKRLRVKTFLKKGEKIESVSSLFSSANWSEREMYDMFGILPLNHPYPKRILMPDD 165
Query: 139 FEGHPLRKDFPVTG 152
+ G+PL K +P+ G
Sbjct: 166 WVGYPLLKSYPLQG 179
>gi|296124091|ref|YP_003631869.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Planctomyces
limnophilus DSM 3776]
gi|296016431|gb|ADG69670.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Planctomyces
limnophilus DSM 3776]
Length = 162
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-- 69
+ G V + + L V L L S L+ F + D+ D+L
Sbjct: 6 LNEHLGG-VLKSESFRDNTRLIVPAAQLDDLMSHLKHH--LGFDMLSDVTCCDYLEYPGA 62
Query: 70 -NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGH 127
+R+ V+Y ++ K RL VK V + + + ADW EREV+D++GI F GH
Sbjct: 63 TDRYGVIYVVVNTKTRERLVVKTFVNDPSPTLPSMYRHWKTADWTEREVYDLFGIHFAGH 122
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVE 155
P+L+RIL FE H LRKD+P+ G E
Sbjct: 123 PNLQRILCPPEFESHALRKDYPLKGRGE 150
>gi|94968316|ref|YP_590364.1| NADH (or F420H2) dehydrogenase, subunit C [Candidatus Koribacter
versatilis Ellin345]
gi|94550366|gb|ABF40290.1| NADH dehydrogenase subunit C [Candidatus Koribacter versatilis
Ellin345]
Length = 227
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + +R A + + L VD G + +R+D F +D+ + +
Sbjct: 67 SEFVASLKRQYGSGIREASIYLKDQYLVVDKGIAFEILKRMREDE--GFDYCVDVTALHW 124
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
R +FD+VY S N R+RV++ + +G V S+ ++P ADW EREV+DM+GI F
Sbjct: 125 PKREEQFDMVYILYSFAKNERVRVEVPIKDGDKVRSVYSLWPTADWLEREVFDMFGIEFT 184
Query: 126 GHPDLRRILTDYGFEGHPLRKDF 148
HP L+RIL + G PLRKD+
Sbjct: 185 EHPGLKRILLPDEWTGFPLRKDY 207
>gi|283778532|ref|YP_003369287.1| NADH (or F420H2) dehydrogenase, subunit C [Pirellula staleyi DSM
6068]
gi|283436985|gb|ADB15427.1| NADH (or F420H2) dehydrogenase, subunit C [Pirellula staleyi DSM
6068]
Length = 166
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + L + F G+ + + + LRD F ++D+
Sbjct: 1 MPATADTLAA-LKTRFPA--LETSEFAGQTRVVLAKNTFERAMTMLRD--ELKFDLLVDV 55
Query: 61 CGVDFL---SRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREV 116
VD+L +RF +VY + R+ V++ + ++PS+V +Y GA+W ERE
Sbjct: 56 TCVDYLNFRDAKDRFGLVYLLANTVTAERITVRVYLNEPELTIPSMVPLYAGANWLEREA 115
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
+DM+GI FEGHPDLRRI+ FE HPLRKD+P+ G E
Sbjct: 116 FDMFGIVFEGHPDLRRIMMPEEFEAHPLRKDYPLQGRGE 154
>gi|288817732|ref|YP_003432079.1| NADH dehydrogenase chain D [Hydrogenobacter thermophilus TK-6]
gi|288787131|dbj|BAI68878.1| NADH dehydrogenase chain D [Hydrogenobacter thermophilus TK-6]
gi|308751331|gb|ADO44814.1| NADH-ubiquinone oxidoreductase chain 49kDa [Hydrogenobacter
thermophilus TK-6]
Length = 572
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
ED + + F +L + L+ L L+D F +D +DF
Sbjct: 7 EDFIE-LKKRFPD--LEVEVKPTITNLHITKEKLIDLLKVLKD--QLGFKLFVDHSVIDF 61
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ RF Y +R+ VK ++PSI ++ W ERE +DM+GI +E
Sbjct: 62 PDKKPRFQAFYILYHVDERKRVVVKTWT--DGTLPSIEKLWFAGKWAERECYDMFGIRYE 119
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGF 153
GH +L R + HPLRKDFP+ G+
Sbjct: 120 GHENLVRAFMWETYPYHPLRKDFPLEGY 147
>gi|284009322|emb|CBA76483.1| NADH-quinone oxidoreductase chain C/D [Arsenophonus nasoniae]
Length = 614
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS--- 67
+ N F + G L + + L+++ FL+ P +V + DL GVD
Sbjct: 44 LRNQFSPDAFTIQSTRTGMLVIWIKREQLLAVIEFLKKQPK-PYVMLFDLHGVDERQRVY 102
Query: 68 ----RSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
F V YH +S + NR + +K+A+ + +VPS+V ++P A+W+EREVWDM+GI
Sbjct: 103 RHGLPDADFSVFYHLISIERNRDIMLKVALSEKDLNVPSLVSLFPNANWYEREVWDMFGI 162
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F GHP+LRR+L ++GHPL KD+P
Sbjct: 163 TFTGHPNLRRLLMPVTWQGHPLCKDYP 189
>gi|312961688|ref|ZP_07776186.1| NADH-quinone oxidoreductase subunit C/D [Pseudomonas fluorescens
WH6]
gi|311283947|gb|EFQ62530.1| NADH-quinone oxidoreductase subunit C/D [Pseudomonas fluorescens
WH6]
Length = 576
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 61/148 (41%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF----- 65
+ N F + G L V LV + +FLR+ P +V + DL GVD
Sbjct: 5 LNNRFGPDAFTAQATRTGMPVLWVARARLVEVLTFLRNLPK-PYVMLYDLHGVDERLRTK 63
Query: 66 ---LSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYG 121
L F V YH +S + N + +K+A++E SVP++ GI+P A W+EREVWDM+G
Sbjct: 64 RQGLPSGADFTVFYHLMSLERNSDVMIKVALSESDLSVPTVTGIWPNASWYEREVWDMFG 123
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFP 149
I F GHP L RI+ +EGHPLRKDFP
Sbjct: 124 IDFPGHPHLTRIMMPPTWEGHPLRKDFP 151
>gi|229591255|ref|YP_002873374.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas fluorescens SBW25]
gi|259514715|sp|C3JY83|NUOCD_PSEFS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|229363121|emb|CAY50140.1| NADH dehydrogenase I chain C/D [Pseudomonas fluorescens SBW25]
Length = 594
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 63/154 (40%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 6 EDLGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V LV + +FLR+ P +V + DL GVD
Sbjct: 17 QDVVVELNNRFGPDAFTAQATRTGMPVLWVARAKLVEVLTFLRNLPK-PYVMLYDLHGVD 75
Query: 65 F--------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFERE 115
L F V YH LS + N + +K+A++E SVP++ GI+P A W+ERE
Sbjct: 76 ERLRTKRQGLPSGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTVTGIWPNASWYERE 135
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
VWDM+GI F GHP L RI+ +EGHPLRKDFP
Sbjct: 136 VWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFP 169
>gi|313143820|ref|ZP_07806013.1| donor-ubiquinone reductase I [Helicobacter cinaedi CCUG 18818]
gi|313128851|gb|EFR46468.1| donor-ubiquinone reductase I [Helicobacter cinaedi CCUG 18818]
Length = 319
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + ++ + + ++L V+ ++ L L + + ++ +D
Sbjct: 104 LGEFESFLQA-LHTPITQSYIQNDLITLWVESTQILPLIKEL---YALGYDFLTEMSAID 159
Query: 65 FLSRSNRFDVVYHFLSPKYN--RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
L +N F++ Y L + +RL++K + +G+ + S+ ++ A+W ERE +DM+GI
Sbjct: 160 KLEENNEFELFYLLLKLEDTSSKRLKIKTKIKKGEHITSLTPLFKSANWSERECFDMFGI 219
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F+GHP L+R+L + GHPL K +P+ G
Sbjct: 220 IFDGHPYLQRLLMPKDWVGHPLLKSYPLQG 249
>gi|78186620|ref|YP_374663.1| NADH (or F420H2) dehydrogenase, subunit C [Chlorobium luteolum DSM
273]
gi|78166522|gb|ABB23620.1| NADH dehydrogenase subunit C [Chlorobium luteolum DSM 273]
Length = 172
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
I F ++ + +V D + F+RD P F + L GVD+
Sbjct: 21 IHEKFGEAISAFDRNPTMPFFEVQDTALWTDIALFMRDHPKLKFNYMACLSGVDYPLEEK 80
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPD 129
V Y R+ VK+ V + A+W ERE +DM GI F GHPD
Sbjct: 81 LGIVCNFESIGVYPHRIAVKVKCPREGGSIPSVACVWHTANWHEREAYDMLGILFTGHPD 140
Query: 130 LRRILTDYGFEGHPLRKDF 148
+RRIL +EG PLRKD+
Sbjct: 141 MRRILCPDDWEGWPLRKDY 159
>gi|56421889|ref|YP_149207.1| NADH dehydrogenase subunit C [Geobacillus kaustophilus HTA426]
gi|56381731|dbj|BAD77639.1| NADH:ubiquinone oxidoreductase 27 kD subunit [Geobacillus
kaustophilus HTA426]
Length = 497
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+E I V + +L V + L+ F + +L
Sbjct: 345 LEKYVRIIHEHLGSDVLEDAYINRLAKDVPTLVVKKEAYYKVAELLKGHEQLRFDYLSEL 404
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S + + +K+ + V S+V ++PGA+W E E +D+
Sbjct: 405 HGTDFQTHME---VYVHLYSYPNRQPVALKVKIERDNPEVDSLVPLWPGANWPECEAYDL 461
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHP+L RI + GHPLRKD+
Sbjct: 462 LGIRFRGHPNLIRIFLGEQWVGHPLRKDY 490
>gi|312112610|ref|YP_003990926.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
Y4.1MC1]
gi|311217711|gb|ADP76315.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
Y4.1MC1]
Length = 383
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRFA----VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I G V + +L V + FL+ + F + +L
Sbjct: 231 LDKYVRMIRERLGGDVLEEAYINRLAKDVPTLVVKKDSYYKVAEFLKYNEQLRFDYLSEL 290
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S + + + +K+ + K + S+V ++ GA+W E E +D+
Sbjct: 291 HGTDFQTHME---VYVHLYSYQNRQPVALKVKIDRDKPEIASLVPLWQGANWPECEAYDL 347
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RI + GHPLRKD+
Sbjct: 348 LGIRFQGHPNLIRIFLGENWVGHPLRKDY 376
>gi|307721749|ref|YP_003892889.1| NADH dehydrogenase subunit C [Sulfurimonas autotrophica DSM 16294]
gi|306979842|gb|ADN09877.1| NADH dehydrogenase subunit C [Sulfurimonas autotrophica DSM 16294]
Length = 268
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I F V+ A V ++ + ++ D+ + +RD + + ++ +D+L++ N
Sbjct: 44 IKAKF--EVKDAYIQVEQMVVYINAHDIYGVLELMRD--ELAYTQLSEMSAIDWLAKDNT 99
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F++ Y LS +R+R+K + G++V S+ ++ ADW ERE++DM+GI HP ++
Sbjct: 100 FEIFYQMLSMTKRKRIRIKYFIENGQAVDSVEKLFRSADWAEREMFDMFGIEANNHPFMK 159
Query: 132 RILTDYGFEGHPLRKDFPVTG 152
RIL Y +EG PL K +P+ G
Sbjct: 160 RILMPYDWEGFPLLKTYPLEG 180
>gi|315638064|ref|ZP_07893249.1| NADH-quinone oxidoreductase subunit C [Campylobacter upsaliensis
JV21]
gi|315481912|gb|EFU72531.1| NADH-quinone oxidoreductase subunit C [Campylobacter upsaliensis
JV21]
Length = 263
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
++ + ++ + + +++ D + + L+ F + +DF
Sbjct: 37 KEFESLLKQEL--ELKASFVELDFWVIEIQKEDNLKALTLLK---GLGFEVFTEASAIDF 91
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+++ F+V Y L+ K R+R++ V + + S+ ++ GA+W ERE++DM+GIF
Sbjct: 92 VAQKQGFEVFYQLLNLKQKLRVRIRTFVGVKERLQSVASVFKGANWSEREIYDMFGIFIV 151
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
GHP+L+R+L + GHP K +P+ G + + K
Sbjct: 152 GHPNLKRLLMPDDWFGHPFLKSYPLQGDEFAKWYEIDK 189
>gi|167752197|ref|ZP_02424324.1| hypothetical protein ALIPUT_00439 [Alistipes putredinis DSM 17216]
gi|167660438|gb|EDS04568.1| hypothetical protein ALIPUT_00439 [Alistipes putredinis DSM 17216]
Length = 542
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+L + I G+V G+ + L +L DDP F + L G+D+
Sbjct: 2 NLQEIITAKVPGAV---YTEAGDGMFTIPVEQFHDLARYLHDDPALRFDFLRSLTGMDWG 58
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ N L+V E +P++ I+ GA+ EREV+D +GI F
Sbjct: 59 EEGLGAVYHLESTATGENVVLKVLTPSREQCGLPTVSDIWKGAELNEREVFDFFGIGFIN 118
Query: 127 HPDLRRILTDYGFEGHPLRKDF-------PVTGFVELHYD 159
HPD+RR+ + G+PLRKD+ P+ E+ +D
Sbjct: 119 HPDMRRLYLRDDWVGYPLRKDYDQSGETNPLRMTNEVAHD 158
>gi|150026261|ref|YP_001297087.1| NADH dehydrogenase I, C subunit [Flavobacterium psychrophilum
JIP02/86]
gi|149772802|emb|CAL44286.1| NADH dehydrogenase I, C subunit [Flavobacterium psychrophilum
JIP02/86]
Length = 173
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + D + +F SV + +V G++ S+ FL+++ F + DL
Sbjct: 1 MALENTQIQDKLTATFGESVVNFRQEKDIFTFEVTAGEMTSVILFLKNEESLNFHFLTDL 60
Query: 61 CGVDFLSRS--NRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
CG+ + + +F VVYH + N+R+R+K + + +I I+ A+W ERE +
Sbjct: 61 CGIHYPDNNVNEQFAVVYHLHNWIENKRIRIKSFINGETPEIKTISNIFLCANWMERETY 120
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
D YGI F GHP L+RIL P+RK+FP+
Sbjct: 121 DFYGINFIGHPQLKRILNMDEMVSFPMRKEFPM 153
>gi|296274501|ref|YP_003657132.1| NADH (or F420H2) dehydrogenase subunit C [Arcobacter nitrofigilis
DSM 7299]
gi|296098675|gb|ADG94625.1| NADH (or F420H2) dehydrogenase, subunit C [Arcobacter nitrofigilis
DSM 7299]
Length = 273
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ I + + A EL + ++ D V+ L+ + +++L +D+L++
Sbjct: 42 EKISSKV--QILEAYVENKELVIYINSKDNVTTLKLLK--EELEYDMLMELSAIDYLAQR 97
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
F++ Y LS ++R+RVK + E + + S+ ++ A+W ERE++DMYG+ HP+
Sbjct: 98 KGFEIFYEMLSMNKHKRIRVKCFIEEKEPIESVYSLFKMANWSEREMYDMYGVKVINHPN 157
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDD 160
++RIL + HPLRK +P+ G + +
Sbjct: 158 MKRILMPDDWYDHPLRKTYPLHGDEVAQWYE 188
>gi|311033317|ref|ZP_07711407.1| NADH dehydrogenase subunit C [Bacillus sp. m3-13]
Length = 433
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNS---VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I ++ + + A + +L + + SFLR + F + ++
Sbjct: 281 LDKYVKVINDNLGENTLEDAYINPLSKDVPTLVAKPENYFKVASFLRYNEQLTFEFLSEM 340
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDM 119
G DF ++ H S K + + +K+ + V I I+ GA+W ERE +D+
Sbjct: 341 HGTDF---ETHMEIYNHLYSYKNKQSVALKVKIDRENPVIPSIQPIWEGANWPERETYDL 397
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHP+L RI+ + G+PLRKD+
Sbjct: 398 LGIHFTGHPNLTRIMMPDDWVGYPLRKDY 426
>gi|148262416|ref|YP_001229122.1| trifunctional NADH dehydrogenase I subunit B/C/D [Geobacter
uraniireducens Rf4]
gi|218528048|sp|A5GCZ4|NUBCD_GEOUR RecName: Full=NADH-quinone oxidoreductase subunit B/C/D; AltName:
Full=NADH dehydrogenase I subunit B/C/D; AltName:
Full=NDH-1 subunit B/C/D
gi|146395916|gb|ABQ24549.1| NADH dehydrogenase subunit D / NADH dehydrogenase subunit B / NADH
dehydrogenase subunit C [Geobacter uraniireducens Rf4]
Length = 793
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI-----IDLC 61
DL + +F + N+ L+ + + L+ F + +D
Sbjct: 228 DLTGELELAFDHRLTVDRNATDMLTYRCPAELVPDVLKHLKQRGSKPFRRLEDIAAVDES 287
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
+ F V YH L +R+K ++ +P+ ++ A+W+EREV+DMY
Sbjct: 288 CRRERGKFRDFTVNYHLLCFDTPGHIRIKTELSGASPELPTATAVFSAANWYEREVFDMY 347
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
GI F GHPDLRRIL +EGHPLRK+ P Y +
Sbjct: 348 GIRFSGHPDLRRILMPPDWEGHPLRKEHPFRATEMPPYTTDDAR 391
>gi|254444494|ref|ZP_05057970.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Verrucomicrobiae bacterium DG1235]
gi|198258802|gb|EDY83110.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Verrucomicrobiae bacterium DG1235]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SRSNRFDVVYHFLSPKYNRRLRV 89
S + LV++ LRD+ + ++D G+D S RF V+YH LS + +RV
Sbjct: 27 SFNCPIDSLVAVLKVLRDNH--GYDMLVDATGMDNGVDASPRFTVIYHLLSTANHVYVRV 84
Query: 90 KIAV--AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+E P++ G++PGADW ERE +D+ GI +E HPD+RRIL + HPLRKD
Sbjct: 85 AADCADSENPVAPTVSGLWPGADWHEREAYDLLGITYENHPDMRRILMWDSYPHHPLRKD 144
Query: 148 FPVTGFVELHYDDK 161
FP+ G + +D++
Sbjct: 145 FPLAGHEDDLWDEE 158
>gi|239905979|ref|YP_002952718.1| NADH-quinone oxidoreductase chain B/C/D [Desulfovibrio magneticus
RS-1]
gi|239795843|dbj|BAH74832.1| NADH-quinone oxidoreductase chain B/C/D [Desulfovibrio magneticus
RS-1]
Length = 793
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVV----YHFLSPKY 83
+ +V + + L+ F + DL +D +R Y S
Sbjct: 249 DMPTFEVPPARVAEVLDHLKRKAPTRFERLEDLTAIDETARKTPAGHEATAVYTLTSLSR 308
Query: 84 NRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+R+ + ++P+ G++ A+W+ERE +M+G+ F+GHPD RR+LT + GH
Sbjct: 309 ATMVRLVCPLQSRDATLPTATGVWSAANWYEREAAEMFGLRFDGHPDPRRLLTHRDWIGH 368
Query: 143 PLRKDF 148
PLRKD+
Sbjct: 369 PLRKDY 374
>gi|57505814|ref|ZP_00371739.1| NADH-ubiquinone oxidoreductase, NQO5 subunit (NQO5) [Campylobacter
upsaliensis RM3195]
gi|57015844|gb|EAL52633.1| NADH-ubiquinone oxidoreductase, NQO5 subunit (NQO5) [Campylobacter
upsaliensis RM3195]
Length = 263
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
++ + ++ + + +++ D + + L+ F + +DF
Sbjct: 37 KEFESLLKQEL--ELKASFVELDFWVIEIQKEDNLKALTLLK---GLGFEVFTEASAIDF 91
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
++ F++ Y L+ K R+RVK V + V S+ ++ GA+W ERE++DM+GIF
Sbjct: 92 IATKKGFELFYQLLNLKQKLRVRVKTFVGVKERVQSVASVFKGANWSEREIYDMFGIFIV 151
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
GHP+L+R+L + GHP K +P+ G + + K
Sbjct: 152 GHPNLKRLLMPDDWFGHPFLKSYPLQGDEFAKWYEIDK 189
>gi|291285959|ref|YP_003502775.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Denitrovibrio
acetiphilus DSM 12809]
gi|290883119|gb|ADD66819.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Denitrovibrio
acetiphilus DSM 12809]
Length = 165
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E L + + F + D + L F ++D+ +
Sbjct: 4 EQLTEKLSAQFPEKLNCYTEFKCNFIKVKDSSVYKDVLQAL--FTEFSFKYMVDVVATHW 61
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ +F++ + S + R+ VK +E P+I I+ GA+ ERE +D+ G+ FE
Sbjct: 62 PKKREKFEITNNLFSIENKLRVFVKT-ASEDNKFPTITDIWAGANLMEREQYDLVGVIFE 120
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVT 151
GHPDL+R+L FEGHPLRKDFP+
Sbjct: 121 GHPDLKRVLLPEFFEGHPLRKDFPLK 146
>gi|254457667|ref|ZP_05071095.1| NADH dehydrogenase, C subunit [Campylobacterales bacterium GD 1]
gi|207086459|gb|EDZ63743.1| NADH dehydrogenase, C subunit [Campylobacterales bacterium GD 1]
Length = 268
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ I F V A V ++ + ++ D + +RD + + ++ +D+L+
Sbjct: 42 EAIKAKF--EVLDAYIQVEQMVVYINAKDNYGVLELMRD--ELGYSQLSEMSAIDWLADR 97
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
F++ Y LS +R+R+K+ + G++V S+ ++ ADW ERE++DM+GI GHP
Sbjct: 98 GGFEIFYQMLSMAKRKRIRIKLFIENGQAVNSVEKLFRSADWSEREMFDMFGIEANGHPF 157
Query: 130 LRRILTDYGFEGHPLRKDFPVTG 152
++RIL Y ++GHPL K +P+ G
Sbjct: 158 MKRILMPYDWQGHPLLKTYPLQG 180
>gi|163781784|ref|ZP_02176784.1| NADH dehydrogenase I chain D [Hydrogenivirga sp. 128-5-R1-1]
gi|159883004|gb|EDP76508.1| NADH dehydrogenase I chain D [Hydrogenivirga sp. 128-5-R1-1]
Length = 586
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/148 (37%), Positives = 75/148 (50%), Gaps = 8/148 (5%)
Query: 10 DYIVNSFSGSVRFAVNSVGE--LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
D I F G V S GE S++V LRD F++ ID+ +DF
Sbjct: 10 DRIGQEFGGDV---SFSFGEHATSVEVSHLRFKEFLRHLRDRE--RFLHFIDMTCIDFPE 64
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
RF VY +P N RL VK +P++ ++PGA W ERE +DM+G+ F GH
Sbjct: 65 DPRRFQGVYILYNPDENERLIVKTWAN-NGKLPTVSDLWPGAKWAEREAYDMFGVEFVGH 123
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVE 155
+LRR+ G+E PLRKDFP+ G E
Sbjct: 124 ENLRRMFMWEGYEYFPLRKDFPIEGIPE 151
>gi|145219898|ref|YP_001130607.1| NADH (or F420H2) dehydrogenase, subunit C [Prosthecochloris
vibrioformis DSM 265]
gi|145206062|gb|ABP37105.1| NADH dehydrogenase subunit C [Chlorobium phaeovibrioides DSM 265]
Length = 172
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
I F ++ ++ +V D + F+RD P F + L GVD+
Sbjct: 21 IHEKFGEAISAFDDNATMPFFEVLDTALWTDIALFMRDHPKLKFNYMACLSGVDYPEEGK 80
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
V + +L VK+ G S+PS+ G++ A+W ERE +DM G+ FEGHPD
Sbjct: 81 LGLVANLESLGVFGHKLAVKVKCPREGGSIPSVAGVWHTANWHEREAYDMLGMLFEGHPD 140
Query: 130 LRRILTDYGFEGHPLRKDFPVT 151
+RRIL +EG PLRKD+ V
Sbjct: 141 MRRILCPDDWEGWPLRKDYKVQ 162
>gi|138896931|ref|YP_001127384.1| NADH dehydrogenase subunit C [Geobacillus thermodenitrificans
NG80-2]
gi|134268444|gb|ABO68639.1| NADH-quinone oxidoreductase chain C [Geobacillus
thermodenitrificans NG80-2]
Length = 514
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I V + +L V+ + FL+ + F + +L
Sbjct: 362 LQKYVRVIEEHLGPDVLEDAYINRLAKDVPTLVVNKEAYYKVAEFLKYNEQLRFDYLSEL 421
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S + + +K+ + + S+V ++PGA+W E E +D+
Sbjct: 422 HGTDFQTHME---VYVHLYSYPKRQPVALKVKIDRDNPEIDSLVPLWPGANWPECEAYDL 478
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHP+L RI + GHPLRKD+
Sbjct: 479 LGIRFRGHPNLIRIFLGEQWVGHPLRKDY 507
>gi|300775174|ref|ZP_07085036.1| NADH-quinone oxidoreductase subunit C/D [Chryseobacterium gleum
ATCC 35910]
gi|300505914|gb|EFK37050.1| NADH-quinone oxidoreductase subunit C/D [Chryseobacterium gleum
ATCC 35910]
Length = 164
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR- 68
+ I F SV + G L+++V D+ + +L+D + D+CG+ +
Sbjct: 8 EAITREFPESVISSSEPYGMLTIEVKKEDIKKIIHYLKD-SSLEINFLTDICGIHYPEFP 66
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
VVYH + N RLR+KI + E V S+ +Y GA+W ERE +D YGI F+GH
Sbjct: 67 EKEIGVVYHLHNMMTNFRLRLKIFMSRENIEVDSLTDLYAGANWMERETYDFYGIKFKGH 126
Query: 128 PDLRRILTDYGFEGHPLRKDFPV 150
PDLR IL HP+ K++ +
Sbjct: 127 PDLRPILNMEDLGYHPMLKEYRL 149
>gi|163783890|ref|ZP_02178865.1| NADH dehydrogenase I chain D [Hydrogenivirga sp. 128-5-R1-1]
gi|159880834|gb|EDP74363.1| NADH dehydrogenase I chain D [Hydrogenivirga sp. 128-5-R1-1]
Length = 583
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
++ +L+S ++D+P F ID VD+ RF VY SP +R+ +K
Sbjct: 29 FFEISKTELLSFLKEIKDNPDLQFKMFIDFTVVDYPLHKPRFQGVYFLYSPLLKKRICIK 88
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
+ +PS+ G++ GA W ERE +DM+GI FEGH +L R+ G+ +PLRKDFP+
Sbjct: 89 TWAE-NERLPSLTGLWKGAKWAEREAYDMFGIQFEGHENLVRMFMWEGYPYYPLRKDFPI 147
Query: 151 TG 152
G
Sbjct: 148 EG 149
>gi|109140506|ref|XP_001118707.1| PREDICTED: NADH-quinone oxidoreductase subunit C/D-like, partial
[Macaca mulatta]
Length = 178
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 6 EDLGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V LV + SFLR+ P +V + DL GVD
Sbjct: 17 QDVVVELNNRFGPDAFTAQATRTGMPVLWVARARLVEVLSFLRNLPK-PYVMLYDLHGVD 75
Query: 65 F--------LSRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFERE 115
L F V YH +S + N + +K+A+ SVP++ GI+P A+W+ERE
Sbjct: 76 ERLRTKRQGLPSGADFTVFYHLMSLERNSDVMIKVALSESDLSVPTVTGIWPNANWYERE 135
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
VWDM+GI F GHP L RI+ +EGHPLRKDFP
Sbjct: 136 VWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFP 169
>gi|77459827|ref|YP_349334.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas fluorescens Pf0-1]
gi|123604055|sp|Q3KA61|NUOCD_PSEPF RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|77383830|gb|ABA75343.1| NADH dehydrogenase subunit D / NADH dehydrogenase subunit C
[Pseudomonas fluorescens Pf0-1]
Length = 594
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 61/154 (39%), Positives = 86/154 (55%), Gaps = 11/154 (7%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V LV + +FLR+ P +V + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVARAKLVEVLTFLRNLPK-PYVMLYDLHGVD 75
Query: 65 F--------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFERE 115
L F V YH +S + N + +K+A++E S+P++ I+P A+W+ERE
Sbjct: 76 ERLRTKRQGLPSGADFTVFYHLMSLERNSDVMIKVALSESDLSLPTVTSIWPNANWYERE 135
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
VWDMYGI F+GHP L RI+ +EGHPLRKDFP
Sbjct: 136 VWDMYGIDFKGHPHLSRIMMPPTWEGHPLRKDFP 169
>gi|242310556|ref|ZP_04809711.1| NADH dehydrogenase I [Helicobacter pullorum MIT 98-5489]
gi|239522954|gb|EEQ62820.1| NADH dehydrogenase I [Helicobacter pullorum MIT 98-5489]
Length = 266
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ DL F V + G L + V D+ S L+ + + ++ +D
Sbjct: 37 LGDLEQLSQKCF---VVESYMQCGTLIIWVKKEDIYSCLEELK---GLSYDVLTEMSAMD 90
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+L + F++ Y LS RR+RVK + + + + S+ ++ A+W ERE++DM+GI
Sbjct: 91 YLEKKGGFEIFYQLLSMDKKRRIRVKTFLKKEEQIQSVSMLFSSANWSEREMYDMFGILP 150
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+ HP +RIL + GHPL K +P+ G
Sbjct: 151 QNHPYPKRILMPDDWVGHPLLKSYPLQG 178
>gi|300773783|ref|ZP_07083652.1| NADH-quinone oxidoreductase subunit C/D [Sphingobacterium
spiritivorum ATCC 33861]
gi|300759954|gb|EFK56781.1| NADH-quinone oxidoreductase subunit C/D [Sphingobacterium
spiritivorum ATCC 33861]
Length = 164
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
ED+ ++ F GSV + G + +L + +LV +C FLRD F + ++ VD
Sbjct: 4 EDIKALLIRQFDGSVIVKEQATGLQPALYIRPENLVEVCQFLRDSSDTYFDFLSNITAVD 63
Query: 65 FLSRSNRFDVVYHFL-----SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
V + L + S+PS+ ++ A+W ERE +D+
Sbjct: 64 DFPADTFIVVYHLASIPYQLQLTLKTELAAGRDLEILPSLPSVSAVWKTAEWHEREAFDL 123
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GIFF HPDLRRIL +EG PLRKD+
Sbjct: 124 MGIFFTDHPDLRRILLPDDWEGFPLRKDY 152
>gi|196249748|ref|ZP_03148444.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
G11MC16]
gi|196210624|gb|EDY05387.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
G11MC16]
Length = 514
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I V + +L V+ + FL+ + F + +L
Sbjct: 362 LQKYVRVIEEHLGPDVLEDAYINRLAKDVPTLVVNKEAYYKVAEFLKYNEQLRFDYLSEL 421
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S + + +K+ + + S+V ++PGA+W E E +D+
Sbjct: 422 HGTDFQTHME---VYVHLYSYPKRQPVALKVKIDRDNPEIDSLVPLWPGANWPECEAYDL 478
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHP+L RI + GHPLRKD+
Sbjct: 479 LGIRFRGHPNLIRIFLGEQWVGHPLRKDY 507
>gi|295400696|ref|ZP_06810673.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977277|gb|EFG52878.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus
thermoglucosidasius C56-YS93]
Length = 391
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRFA----VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I G V + +L V + FL+ + F + +L
Sbjct: 239 LDKYVRMIRERLGGDVLEEAYINRLAKDVPTLVVKKDAYYKVAEFLKYNEQLRFDYLSEL 298
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S + + + +K+ + K + S+V ++ GA+W E E +D+
Sbjct: 299 HGTDFQTHME---VYVHLYSYQNRQPVALKVKIDRDKPEIASLVPLWQGANWPECEAYDL 355
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RI + GHPLRKD+
Sbjct: 356 LGIRFQGHPNLIRIFLGENWVGHPLRKDY 384
>gi|295697423|ref|YP_003590661.1| NADH (or F420H2) dehydrogenase, subunit C [Bacillus tusciae DSM
2912]
gi|295413025|gb|ADG07517.1| NADH (or F420H2) dehydrogenase, subunit C [Bacillus tusciae DSM
2912]
Length = 167
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELS----LDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
E L + F + LDV + + +LR+ P F + DL
Sbjct: 14 EALARDLETVFGPHALEDARVADHMYKAAKLDVVPERWLPVAQYLRNTPAWSFDYLNDLH 73
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMY 120
VD F V Y S + L V + V + I+P ADW ERE +D++
Sbjct: 74 AVDL---GGEFRVNYFLESFTHGHMLAVSVTVPRDNPRVPSVTEIWPTADWHEREAYDLF 130
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHP+L+RIL +EGHPLRKD+
Sbjct: 131 GILFVGHPNLKRILLPEDWEGHPLRKDY 158
>gi|111074960|gb|ABH04822.1| NAD(P)H-quinone oxidoreductase 27 kDa subunit [Heliobacillus
mobilis]
Length = 154
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELS---LDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + L Y + + V VGE L V +L+ + L P F +
Sbjct: 1 MAINL--LDRYNPEELNAKLGTTVEVVGEGVSRALVVTKENLIPVMEKLCKSPEWAFDML 58
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREV 116
D+ VD +VVY S K+ LRVK + + VP++ I+PGA++ EREV
Sbjct: 59 SDISSVDRKEAG--LEVVYQLFSIKHKYDLRVKSIIPRDEAQVPTVTSIWPGANFMEREV 116
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+D+ G+ F GHP++ R+L FEGHPLRKDF +
Sbjct: 117 YDLMGVAFPGHPNMTRLLLPEEFEGHPLRKDFKLQ 151
>gi|330810465|ref|YP_004354927.1| NADH-quinone oxidoreductase subunit C/D [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327378573|gb|AEA69923.1| NADH-quinone oxidoreductase subunit C/D [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 593
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 10/153 (6%)
Query: 6 EDLGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V LV + +FLR+ P +V + DL GVD
Sbjct: 17 QDVVVELNNRFGPEAFTAQPTRTGMPVLWVARAKLVEVLTFLRNLPK-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
R+ R F V YH +S + N + +K+A++E SVP++ GI+P A+W+EREV
Sbjct: 76 ERLRTKRQGLPDGVFTVFYHLMSIERNSDVMIKVALSESDLSVPTVTGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
WDM+GI F GHP L RI+ +EGHPLRKDFP
Sbjct: 136 WDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFP 168
>gi|282600310|ref|ZP_05973799.2| NADH-quinone oxidoreductase, C/D subunit [Providencia rustigianii
DSM 4541]
gi|282565808|gb|EFB71343.1| NADH-quinone oxidoreductase, C/D subunit [Providencia rustigianii
DSM 4541]
Length = 600
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS--- 67
+ N F + G + V L+ + FL+ P +V + DL GVD
Sbjct: 30 LRNQFGPDAFSVQATRTGMPVIWVRREQLLEVVDFLKKLPK-PYVMLFDLHGVDERQRIH 88
Query: 68 ----RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
F V YH +S NR + +K+A+ E IV ++P A+W EREVWDM+GI
Sbjct: 89 RQGLPEADFSVFYHLISIDRNRDIMLKVALNENDLNVPSIVSLFPNANWHEREVWDMFGI 148
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRR+L +EGHPLRKD+P
Sbjct: 149 TFQGHPNLRRLLMSPNWEGHPLRKDYP 175
>gi|146299004|ref|YP_001193595.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Flavobacterium
johnsoniae UW101]
gi|146153422|gb|ABQ04276.1| NADH dehydrogenase subunit C [Flavobacterium johnsoniae UW101]
Length = 173
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + + + +F+ V +L+ + +L FL++D F + DL
Sbjct: 1 MALENTQIQNKLTETFNNDVFNFHEERDIFTLEASADKITALILFLKNDSELQFHFLTDL 60
Query: 61 CGVDFL--SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
CG+ + +F VVYH + N+R+R+K+ + K + +I I+ ++W ERE +
Sbjct: 61 CGIHYPDNESERQFAVVYHLHNWFENKRIRIKVYLNGEKPEIKTISNIFLSSNWMERETY 120
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
D YGI F GHP L+RIL P+RK+FP+
Sbjct: 121 DFYGINFVGHPQLKRILNMDEMVSFPMRKEFPM 153
>gi|224437357|ref|ZP_03658329.1| NADH dehydrogenase subunit C [Helicobacter cinaedi CCUG 18818]
Length = 247
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + ++ + + ++L V+ ++ L L + + ++ +D
Sbjct: 32 LGEFESFLQA-LHTPITQSYIQNDLITLWVESTQILPLIKEL---YALGYDFLTEMSAID 87
Query: 65 FLSRSNRFDVVYHFLSPKYN--RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
L +N F++ Y L + +RL++K + +G+ + S+ ++ A+W ERE +DM+GI
Sbjct: 88 KLEENNEFELFYLLLKLEDTSSKRLKIKTKIKKGEHITSLTPLFKSANWSERECFDMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
F+GHP L+R+L + GHPL K +P+ G
Sbjct: 148 IFDGHPYLQRLLMPKDWVGHPLLKSYPLQG 177
>gi|225164241|ref|ZP_03726514.1| NADH (or F420H2) dehydrogenase, subunit C [Opitutaceae bacterium
TAV2]
gi|224801146|gb|EEG19469.1| NADH (or F420H2) dehydrogenase, subunit C [Opitutaceae bacterium
TAV2]
Length = 207
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M D+ + F + S +++V + V LRD+ C +ID+
Sbjct: 1 MSA---DILAALQARFPHA--KPRPSADHPAINVPITEAVGTLKTLRDEFAC--DLLIDV 53
Query: 61 CGVDFLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVW 117
G+D + + RF V+H LS +RV A P++ ++ A+W ERE +
Sbjct: 54 TGIDNGTDATPRFTTVWHVLSTTKATYIRVAADCASDTEPVAPTVSQLWAAANWHERETY 113
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPV 170
D+ GI F HPDLRRIL G+ GHPLRKDFP+ G D ++ V PV
Sbjct: 114 DLLGITFSEHPDLRRILMWEGYPGHPLRKDFPLAGVETTLPDLEIAAVTGTPV 166
>gi|296121585|ref|YP_003629363.1| NADH (or F420H2) dehydrogenase, subunit C [Planctomyces limnophilus
DSM 3776]
gi|296013925|gb|ADG67164.1| NADH (or F420H2) dehydrogenase, subunit C [Planctomyces limnophilus
DSM 3776]
Length = 179
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
Query: 10 DYIVNSFSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ G SVR + G+ +++ L C LRD C F + DL VD+ S
Sbjct: 9 ALLEQQLPGGSVRLVEAATGDSWIELKSHALRQACQILRDHQDCQFNVLSDLTAVDWFSP 68
Query: 69 --------SNRFDVVYHFLSPKYNRRLRVKIAVAE-----------GKSVPSIVGIYPGA 109
RF+VVYH LS + L +K+ + +PSI ++ A
Sbjct: 69 AGKKPVIADPRFEVVYHLLSLSRRQTLTLKVILPRPGGDELSKDAELPEIPSIADLWLAA 128
Query: 110 DWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD--FPV 150
+W ERE +DM+GI F+GHPDLRRIL +EG+PLRKD FP+
Sbjct: 129 NWHEREAFDMFGIRFKGHPDLRRILCPEDWEGYPLRKDYEFPL 171
>gi|292492187|ref|YP_003527626.1| NADH dehydrogenase I, D subunit [Nitrosococcus halophilus Nc4]
gi|291580782|gb|ADE15239.1| NADH dehydrogenase I, D subunit [Nitrosococcus halophilus Nc4]
Length = 580
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-------SRS 69
S G + V + + +L+ + + + DL +D
Sbjct: 15 PSSFILQETGEGIPTFWVKKEQITKVLKYLKSEVERPYPMLYDLTAIDERVRTHRPAQPE 74
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHP 128
+ F +VYH LS N +R+K+ + I I+P A+W+EREVWD++GI FEGHP
Sbjct: 75 SDFSLVYHLLSFDRNEDIRLKVPLKGESPSLPTITPIWPAANWYEREVWDLFGINFEGHP 134
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
LRRIL +E HPLRKD+P + +K V
Sbjct: 135 HLRRILLPPTWESHPLRKDYPARATEMDPFQLSEEKQVRE 174
>gi|297531554|ref|YP_003672829.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
C56-T3]
gi|297254806|gb|ADI28252.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
C56-T3]
Length = 428
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+E I V + +L V + L+ F + +L
Sbjct: 276 LEKYVRIIHEHLGSDVLEDAYINRLAKDVPTLVVKKEAYYKVAELLKGHEQLRFDYLSEL 335
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S + +K+ + V S+V ++PGA+W E E +D+
Sbjct: 336 HGTDFQTHME---VYVHLYSYPNRHPVALKVKIERDNPEVDSLVPLWPGANWPECEAYDL 392
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHP+L RI + GHPLRKD+
Sbjct: 393 LGIRFRGHPNLIRIFLGEQWVGHPLRKDY 421
>gi|294140413|ref|YP_003556391.1| NADH dehydrogenase I subunits C/D [Shewanella violacea DSS12]
gi|293326882|dbj|BAJ01613.1| NADH dehydrogenase I, C/D subunits [Shewanella violacea DSS12]
Length = 596
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ ++E L S L+L +D L+ S L+ P F + DL
Sbjct: 24 MLPELEHL-------LGDSAIEQSTVDNILTLWIDKHQLIPALSLLKSLPE-PFNFLFDL 75
Query: 61 CGVDF-------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFE 113
GVD L + F +VY LS N+ +R+K+ + + + SI I+P A+W+E
Sbjct: 76 YGVDERLRLDKALLPAKDFTLVYQVLSIARNQDIRLKVTLEDNEHQASITSIWPSANWYE 135
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
RE WD++GI F+ HP+LRRIL ++GHPLRK+FP + K+
Sbjct: 136 REAWDLFGIVFDAHPNLRRILLPPTYQGHPLRKEFPCRATETEPFTLDDDKLARE 190
>gi|197285618|ref|YP_002151490.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Proteus
mirabilis HI4320]
gi|227356121|ref|ZP_03840511.1| NADH-quinone oxidoreductase chain C/D [Proteus mirabilis ATCC
29906]
gi|218528051|sp|B4EZC8|NUOCD_PROMH RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|194683105|emb|CAR43664.1| NADH-quinone oxidoreductase chain C/D [Proteus mirabilis HI4320]
gi|227163766|gb|EEI48678.1| NADH-quinone oxidoreductase chain C/D [Proteus mirabilis ATCC
29906]
Length = 598
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 6 EDLGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + + F + F G + V L+ + +L+ P +V + DL GVD
Sbjct: 22 DQVVNELRQKFGPDAFTFQPTRTGMPVVWVKREQLIEVMQYLKSLPK-PYVMLYDLHGVD 80
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R++R F V YH +S N+ + +K+A+ + ++P++ I+P ++W+EREV
Sbjct: 81 ERVRTHRQGLPAADFSVFYHLISLDRNKDIMLKVALSEKDLNLPTLTSIFPNSNWYEREV 140
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
WDM+GI F GHP+LRRI+ +EGHPLRKD+P
Sbjct: 141 WDMFGIVFNGHPNLRRIMMLPNWEGHPLRKDYP 173
>gi|121534364|ref|ZP_01666188.1| NADH (or F420H2) dehydrogenase, subunit C [Thermosinus
carboxydivorans Nor1]
gi|121307134|gb|EAX48052.1| NADH (or F420H2) dehydrogenase, subunit C [Thermosinus
carboxydivorans Nor1]
Length = 155
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
E L V G L ++ L++D CCF + L V++ + F+VVYH S R
Sbjct: 29 EPVLLVTAGRLKAILKRLKEDERCCFDFLSSLTAVEYPAY---FEVVYHLYSLPLGHRAT 85
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
VK VA+ VPSI ++P A++ EREV+D+ G+ F GHP L RIL GF+GHPLRKD
Sbjct: 86 VKTRVAKDDPQVPSIADLWPTANFQEREVYDLLGVVFTGHPGLTRILLPEGFDGHPLRKD 145
Query: 148 FPVTGFVELH 157
+ + +E
Sbjct: 146 YKLPLRLETR 155
>gi|193216260|ref|YP_001997459.1| NADH (or F420H2) dehydrogenase subunit C [Chloroherpeton thalassium
ATCC 35110]
gi|218534263|sp|B3QY46|NUOC_CHLT3 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|193089737|gb|ACF15012.1| NADH (or F420H2) dehydrogenase, subunit C [Chloroherpeton
thalassium ATCC 35110]
Length = 240
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
I F +V N+ V + ++ F+R+D F + L GVD+
Sbjct: 90 IKEKFGDAVSDLDNNPLMPFFTVENVDAWQAIAFFMREDERLRFDYMACLSGVDYGDGRL 149
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
+ L+ ++ E +PS+ I+ ADW ERE +DMYGI FEGHPD+
Sbjct: 150 GVVYNFDALATHKHKLTVKVFCSKEDPRIPSVAEIWLTADWHEREAYDMYGIVFEGHPDM 209
Query: 131 RRILTDYGFEGHPLRKDFPVT 151
RRIL ++G+PLRKD+ V
Sbjct: 210 RRILCPDDWDGYPLRKDYKVQ 230
>gi|34556899|ref|NP_906714.1| NADH dehydrogenase subunit C [Wolinella succinogenes DSM 1740]
gi|34482614|emb|CAE09614.1| NADH DEHYDROGENASE I CHAIN C [Wolinella succinogenes]
Length = 266
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
V + G+ V+ + + L+ + + ++ +D+L + F+V Y
Sbjct: 49 KVLESYVERGDWVAYVEPKENKKALAALK---RMGYEILSEMSAIDYLETRHGFEVFYQL 105
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
LS + + R+R+K+ + EG + S ++ ADW ERE++DM+GI HP L+RIL
Sbjct: 106 LSMEKHHRMRLKLFLPEGMELESANDLFRSADWSEREMYDMFGIRLLHHPYLKRILMPDD 165
Query: 139 FEGHPLRKDFPVTGFVELHYDDKVK 163
+ G+PLRK +P+ G + + K
Sbjct: 166 WSGYPLRKSYPLHGDEAAQWYEVDK 190
>gi|326800733|ref|YP_004318552.1| NAD(P)H-quinone oxidoreductase subunit J [Sphingobacterium sp. 21]
gi|326551497|gb|ADZ79882.1| NAD(P)H-quinone oxidoreductase subunit J [Sphingobacterium sp. 21]
Length = 164
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 4 KIEDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ + + + + F + + +L + L ++C L+++ F + + G
Sbjct: 2 DLTKIKNILTSRFGNECIVDEELQGLQPALVIHRDFLRAVCKELKENQDTWFDFLSCISG 61
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS------VPSIVGIYPGADWFEREV 116
VD+ + F VVYH S Y +L +K+ + + + S+ I+ ADW ERE
Sbjct: 62 VDY-GVNEGFGVVYHLASIPYKTQLTLKVKLDNLREGSTLPSIDSVSTIWRTADWHEREA 120
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+D+ GIFF HPDLRRIL + G+PLRKD+
Sbjct: 121 YDLVGIFFNDHPDLRRILLPDDWSGYPLRKDY 152
>gi|70731258|ref|YP_260999.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas fluorescens Pf-5]
gi|123654429|sp|Q4K9T4|NUOCD_PSEF5 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|68345557|gb|AAY93163.1| NADH-quinone oxidoreductase, C/D subunit [Pseudomonas fluorescens
Pf-5]
Length = 593
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 10/153 (6%)
Query: 6 EDLGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V LV + +FLR+ P +V + DL GVD
Sbjct: 17 QDVVVELNNRFGPEAFTAQATRTGMPVLWVTRSKLVEVLTFLRNLPK-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K+A++E S+P++ GI+P A+W+EREV
Sbjct: 76 ERLRTKRQGLPGADFSVFYHLLSIERNSDVMIKVALSEGDLSLPTVTGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
WDM+GI F GHP L RI+ +EGHPLRKDFP
Sbjct: 136 WDMFGIDFAGHPHLSRIMMPPTWEGHPLRKDFP 168
>gi|253989002|ref|YP_003040358.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780452|emb|CAQ83614.1| nadh dehydrogenase i chain c/d (nadh-ubiquinone oxidoreductase chai
3/4) (nuo3/nuo4) [Photorhabdus asymbiotica]
Length = 599
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + FL+ P +V + DL G+D R++R
Sbjct: 35 PDAFTVQPTRTGIPVVWVKREQLLEVMIFLKKLPK-PYVMLFDLHGMDERQRTHRQGLPD 93
Query: 72 --FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHP 128
F V YH LS + NR + +K+A+ E ++P A+W+ERE W+M+GI F GHP
Sbjct: 94 ADFSVFYHLLSIERNRDIMLKVALNEKDLNLPTATPLFPNANWYERETWEMFGIVFNGHP 153
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
+LRRI+ +EGHPLRKD+P
Sbjct: 154 NLRRIMMPPTWEGHPLRKDYP 174
>gi|330958157|gb|EGH58417.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 593
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L VD LV + +FLR P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQSTRTGMPVLWVDRARLVEILTFLRQLPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R++R F V YH LS + N + +K+A+ SVP+I GI+P A+W+EREV
Sbjct: 76 ERLRTHRRDLPAADFTVFYHLLSVERNSDVMIKVALSERDLSVPTITGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
WDM+GI F GHP L RI+ +EGHPLRKDFP Y + K +L +E
Sbjct: 136 WDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARATEFDPYSLTLAK-----QQLEEEA 190
Query: 177 RDYDFLSPWEGVNSLFAKED 196
+D + W G+ ED
Sbjct: 191 ARFDPEA-W-GMKRSGKNED 208
>gi|188026169|ref|ZP_02961127.2| hypothetical protein PROSTU_03121 [Providencia stuartii ATCC 25827]
gi|188021886|gb|EDU59926.1| hypothetical protein PROSTU_03121 [Providencia stuartii ATCC 25827]
Length = 599
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS--- 67
+ N F + G + V L+ + FL+ P +V + DL GVD
Sbjct: 29 LRNQFGPDAFSVQATRTGMPVIWVRREQLLEVVDFLKKLPK-PYVMLFDLHGVDERQRIH 87
Query: 68 ----RSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGI 122
F V YH +S NR + +K+A+ E +VPSIV ++P A+W+EREVWDM+GI
Sbjct: 88 RQGLPEADFSVFYHLISIDRNRDIMLKVALNEKDLNVPSIVSLFPNANWYEREVWDMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRR+L +EGHPLRKD+P
Sbjct: 148 TFQGHPNLRRLLMSPSWEGHPLRKDYP 174
>gi|26990815|ref|NP_746240.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas putida KT2440]
gi|81586000|sp|Q88FH5|NUOCD_PSEPK RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|24985821|gb|AAN69704.1|AE016606_7 NADH dehydrogenase I, C,D subunit [Pseudomonas putida KT2440]
gi|313498029|gb|ADR59395.1| NuoCD [Pseudomonas putida BIRD-1]
Length = 593
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V L + SFLR + + DL GVD
Sbjct: 17 QDVVVELNNRFGADAFVAQETRTGMPVLWVKRAQLKEVLSFLRGVAK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K++++EG + GI+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPAADFSVFYHLLSIERNSDVMIKVSLSEGDLNLPTVTGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKD+P Y
Sbjct: 136 WDMFGIDFAGHPHLSRIMMPPTWEGHPLRKDYPARATEFDPYS 178
>gi|194336920|ref|YP_002018714.1| NADH (or F420H2) dehydrogenase, subunit C [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309397|gb|ACF44097.1| NADH (or F420H2) dehydrogenase, subunit C [Pelodictyon
phaeoclathratiforme BU-1]
Length = 172
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
I F +V + +V + V + F+RD F + L GVD+ +
Sbjct: 21 IQERFGSAVSAFDANETMPFFEVLNTDLWVDIALFMRDHAKLKFNYMACLSGVDYQAEEK 80
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPD 129
V +N +L VK+ A V + A+W ERE +DM+G+ F GHPD
Sbjct: 81 VGIVCNLESLGLFNHKLAVKVKCARDGGFIPSVACVWHTANWHEREAYDMFGMVFTGHPD 140
Query: 130 LRRILTDYGFEGHPLRKDFPVT 151
RRIL +EG PLRKD+ V
Sbjct: 141 PRRILCPEDWEGFPLRKDYKVQ 162
>gi|238897507|ref|YP_002923186.1| NADH dehydrogenase I chain C, D [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229465264|gb|ACQ67038.1| NADH dehydrogenase I chain C, D [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 599
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 21/169 (12%)
Query: 1 MVRKI-----------EDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRD 48
M + + + + F F + G + V LV + FLR
Sbjct: 6 MAENLYKPCQTDDHLDDSVIARLSARFGQKSLFVQATRTGMPVVWVKADQLVEVILFLRQ 65
Query: 49 DPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS 101
+ +V + DL GVD R++R F V YH LS + NR + +K+A++E K
Sbjct: 66 ESQ-PYVMLFDLHGVDERLRTHREGLPEADFCVFYHLLSIERNRDILLKVALSEKKLCLP 124
Query: 102 -IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
I I+ A+W+ERE W+M+GI FEGHP L+RIL ++GHPLRKD+P
Sbjct: 125 TITSIFSNANWYERETWEMFGITFEGHPHLKRILMPDTWKGHPLRKDYP 173
>gi|292655128|ref|YP_003535025.1| NADH-quinone oxidoreductase chain c/d [Haloferax volcanii DS2]
gi|291372733|gb|ADE04960.1| nadh-quinone oxidoreductase chain c/d [Haloferax volcanii DS2]
Length = 568
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
D + + +V V ++ + + S S LRDD ++ + ++ R
Sbjct: 33 ADALRRALGDAVLATEEHVHAPAVQIRPDAVQSSLSALRDD--LGLDHLSCVTAQEYEDR 90
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ + P + V S ++ A+W ERE +D+ GI +E HP
Sbjct: 91 YESVYHLKSYDDPTREASVVVPTP-RSDPVSESAAPVFRTAEWHEREAYDLVGIQYENHP 149
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
DLRRIL ++GHPL D+ T + YD+
Sbjct: 150 DLRRILLPETWQGHPLGLDYDRTRPQVVRYDEN 182
>gi|91065095|gb|ABE03927.1| NuoC [Theonella swinhoei bacterial symbiont clone pSW1H8]
Length = 175
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR----SNRFDVVYHFLSPKYN 84
+S+ V+ LV ++ F ++ D+ G+D+L RF V Y+ + +
Sbjct: 1 MVSVTVEPDRLVGAVGAVK---GAGFDHLSDIFGIDYLDYPGHRDKRFTVAYNLYAIEAG 57
Query: 85 RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RL +++ + EG +P+I G++ GAD+ EREV+DM+GI F GHP+LR++LT EGHP
Sbjct: 58 ARLFLRVDLDEGTELPTITGLWRGADFMEREVYDMFGIVFGGHPNLRKLLTPEDLEGHPH 117
Query: 145 RKDFPV 150
RKDFP+
Sbjct: 118 RKDFPL 123
>gi|37526975|ref|NP_930319.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|81418914|sp|Q7N2I9|NUOCD_PHOLL RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|36786408|emb|CAE15461.1| NADH dehydrogenase I chain C/D (NADH-ubiquinone oxidoreductase
chain 3/4) (NUO3/NUO4) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 599
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + +FL+ P +V + DL G+D R++R
Sbjct: 35 PDAFTVQPTRTGIPVVWVKREQLLEVMTFLKKLPK-PYVMLFDLHGMDERQRTHRQGLPA 93
Query: 72 --FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHP 128
F V YH LS + NR + +K+A++E + ++P A+W+ERE W+M+G+ F GHP
Sbjct: 94 ADFSVFYHLLSIERNRDIMLKVALSEKELNLPTATPLFPNANWYERETWEMFGVVFNGHP 153
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
+LRRI+ +EGHPLRKD+P
Sbjct: 154 NLRRIMLPPTWEGHPLRKDYP 174
>gi|261420759|ref|YP_003254441.1| NADH dehydrogenase subunit C [Geobacillus sp. Y412MC61]
gi|319768429|ref|YP_004133930.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
Y412MC52]
gi|261377216|gb|ACX79959.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
Y412MC61]
gi|317113295|gb|ADU95787.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
Y412MC52]
Length = 392
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+E I V + +L V + L+ F + +L
Sbjct: 240 LEKYVRIIHEHLGSDVLEDAYINRLAKDVPTLVVKKEAYYKVAELLKGHEQLRFDYLSEL 299
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S + + +K+ + V S+V ++PGA+W E E +D+
Sbjct: 300 HGTDFQTHME---VYVHLYSYPNRQPVALKVKIERDNPEVDSLVPLWPGANWPECEAYDL 356
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHP+L RI + GHPLRKD+
Sbjct: 357 LGIRFRGHPNLIRIFLGEQWVGHPLRKDY 385
>gi|332971774|gb|EGK10722.1| NADH-quinone oxidoreductase subunit C/D [Desmospora sp. 8437]
Length = 219
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 17 SGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
S +V A + +L + + + L ++ F + +L GVD + +
Sbjct: 80 SEAVEEAYINRPGGDRPTLVISPEKWLEVARLLLEEESLAFDYLENLSGVDE---EDHME 136
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
++YH S + + VK+ + VPS+ G++ ADW ERE++D+ G+ F GHP+L R
Sbjct: 137 ILYHLTSLTHGHDICVKVKTGREEAEVPSVTGVWRAADWHEREIYDLLGVRFTGHPNLER 196
Query: 133 ILTDYGFEGHPLRKDF 148
IL G+ GHPLRKD+
Sbjct: 197 ILMPKGWVGHPLRKDY 212
>gi|262369335|ref|ZP_06062663.1| NADH-quinone oxidoreductase subunit C/D [Acinetobacter johnsonii
SH046]
gi|262315403|gb|EEY96442.1| NADH-quinone oxidoreductase subunit C/D [Acinetobacter johnsonii
SH046]
Length = 595
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + F + ++ V+ + + FLR +V + DL VD
Sbjct: 22 IVEELKTKFGENFYVQTTFEDFPTVWVERARVQEVLMFLRTVSR-PYVMLFDLSAVDERL 80
Query: 68 RSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDM 119
R++R F V YH LS + N +R+K+A+ E I+P A+W+ERE +DM
Sbjct: 81 RTHRDGLPASDFTVFYHLLSLERNSDIRIKVALNENDVNLPTATNIWPNANWYEREAYDM 140
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GI FEGHP LRRIL +EGHPLRK++ Y K Y QEH +
Sbjct: 141 FGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQNQAKQDYE-----QEHLRF 195
>gi|94985018|ref|YP_604382.1| NADH (or F420H2) dehydrogenase, subunit C [Deinococcus geothermalis
DSM 11300]
gi|218534282|sp|Q1IZX1|NUOC_DEIGD RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|94555299|gb|ABF45213.1| NADH dehydrogenase subunit C [Deinococcus geothermalis DSM 11300]
Length = 213
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----FDVVYHFLSPKYN 84
E + V L + LRD ++D GVD+ + R F V+++ K
Sbjct: 37 EPTALVPPERLREVALALRD----RGFMLMDTVGVDYGAFPERIPARFCVLHNVYHIKDR 92
Query: 85 RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RL +++ + EG+++ S+ ++ A++ EREV+D++GI F GHPDLR+ILT EGHPL
Sbjct: 93 CRLFLRVWLEEGQALDSLYPVWRAANYLEREVYDLFGIEFVGHPDLRKILTPDDLEGHPL 152
Query: 145 RKDFPV 150
RKDFP+
Sbjct: 153 RKDFPL 158
>gi|269128581|ref|YP_003301951.1| NADH (or F420H2) dehydrogenase subunit C [Thermomonospora curvata
DSM 43183]
gi|268313539|gb|ACY99913.1| NADH (or F420H2) dehydrogenase, subunit C [Thermomonospora curvata
DSM 43183]
Length = 211
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
F ++ G+ +DV + F R + L VD L R
Sbjct: 11 AERFGEDAV-VTDAFGQPVVDVPAASWPAALDFAR--TELGYDYFDWLTAVDELDDGFRV 67
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
V + + R L + +PS G+Y GADW ERE ++M+GI F+GHPDLR
Sbjct: 68 -VAHVYSLRHRRRLLLRTLVPRRDPRLPSATGVYRGADWHERETFEMFGIVFDGHPDLRP 126
Query: 133 ILTDYGFEGHPLRKDFPVT 151
+L GF+GHPLRKDF +
Sbjct: 127 LLLPDGFQGHPLRKDFVLA 145
>gi|213970033|ref|ZP_03398165.1| NADH dehydrogenase I, C/D subunit [Pseudomonas syringae pv. tomato
T1]
gi|301381388|ref|ZP_07229806.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. tomato Max13]
gi|302062159|ref|ZP_07253700.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. tomato K40]
gi|213925137|gb|EEB58700.1| NADH dehydrogenase I, C/D subunit [Pseudomonas syringae pv. tomato
T1]
Length = 593
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPQ-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|291446996|ref|ZP_06586386.1| predicted protein [Streptomyces roseosporus NRRL 15998]
gi|291349943|gb|EFE76847.1| predicted protein [Streptomyces roseosporus NRRL 15998]
Length = 522
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 14 NSFSGSVRFA-------VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ +V ++ L++DV D ++ RD+ C + L VD
Sbjct: 86 DRLPDAVTDVFGDGATAESAYDLLTVDVPAADWLTALRTARDELGCTY--FDWLSAVDEP 143
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
R L RRL V+ V +V + +Y GA W ERE +M+G+ F+
Sbjct: 144 GVGFRVCAHVAALGTGTVRRLMVRTTVPHDAAVLPSAIDVYAGAAWHERETHEMFGVAFD 203
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVT 151
GHP L +L GFEGHPLRKDF +
Sbjct: 204 GHPHLVPLLLPEGFEGHPLRKDFVLA 229
>gi|239943529|ref|ZP_04695466.1| putative NADH dehydrogenase subunit [Streptomyces roseosporus NRRL
15998]
gi|239989983|ref|ZP_04710647.1| putative NADH dehydrogenase subunit [Streptomyces roseosporus NRRL
11379]
Length = 456
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 14 NSFSGSVRFA-------VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ +V ++ L++DV D ++ RD+ C + L VD
Sbjct: 20 DRLPDAVTDVFGDGATAESAYDLLTVDVPAADWLTALRTARDELGCTY--FDWLSAVDEP 77
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
R L RRL V+ V +V + +Y GA W ERE +M+G+ F+
Sbjct: 78 GVGFRVCAHVAALGTGTVRRLMVRTTVPHDAAVLPSAIDVYAGAAWHERETHEMFGVAFD 137
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVT 151
GHP L +L GFEGHPLRKDF +
Sbjct: 138 GHPHLVPLLLPEGFEGHPLRKDFVLA 163
>gi|289625428|ref|ZP_06458382.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289649289|ref|ZP_06480632.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. aesculi str. 2250]
gi|289679198|ref|ZP_06500088.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. syringae FF5]
gi|298487550|ref|ZP_07005592.1| NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone
oxidoreductase chain D [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157934|gb|EFH99012.1| NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone
oxidoreductase chain D [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330866836|gb|EGH01545.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330954561|gb|EGH54821.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae Cit 7]
gi|330981369|gb|EGH79472.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 593
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|66046428|ref|YP_236269.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. syringae B728a]
gi|75501521|sp|Q4ZRJ1|NUOCD_PSEU2 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|63257135|gb|AAY38231.1| NADH (or F420H2) dehydrogenase, subunit C:NADH dehydrogenase I, D
subunit [Pseudomonas syringae pv. syringae B728a]
Length = 593
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|227539637|ref|ZP_03969686.1| NADH dehydrogenase I subunit C, D [Sphingobacterium spiritivorum
ATCC 33300]
gi|227240550|gb|EEI90565.1| NADH dehydrogenase I subunit C, D [Sphingobacterium spiritivorum
ATCC 33300]
Length = 164
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
ED+ ++ F GSV + G + +L + +LV +C FLRD F + ++ VD
Sbjct: 4 EDIKTLLIRQFDGSVIVKEQATGLQPALYILPENLVKVCQFLRDCSDTYFDFLSNITAVD 63
Query: 65 FLSRSNRFDVVYHFL-----SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
V + L + S+PS+ ++ A+W ERE +D+
Sbjct: 64 DFPADTFTVVYHLASIPYQLQLTLKTELAAVRDLEILPSLPSVSAVWKTAEWHEREAFDL 123
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GIFF HPDLRRIL +EG PLRKD+
Sbjct: 124 MGIFFTDHPDLRRILLPDDWEGFPLRKDY 152
>gi|325954436|ref|YP_004238096.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Weeksella virosa
DSM 16922]
gi|323437054|gb|ADX67518.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Weeksella virosa
DSM 16922]
Length = 178
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 2/157 (1%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ + F + G L + D + L FL D F + DL V +
Sbjct: 5 KIQQLLTQKFEDKIYGFQEHFGVLKVYADKNINLKLMQFLYDHEELAFRFLTDLTAVHYP 64
Query: 67 SRSN-RFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFF 124
+V Y + N+ +R+ A+ + + + ++ A+W ERE +D +G+ F
Sbjct: 65 KHKGGEIEVTYLMHNMYTNQSIRLNFAIDIKQPDIFTATKLFEAANWLERECYDFFGVNF 124
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
GHP+L RI+ + PLRK+FP+ DD+
Sbjct: 125 IGHPNLIRIMNVEEMDYFPLRKEFPLEDQTRKDKDDE 161
>gi|302185025|ref|ZP_07261698.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. syringae 642]
Length = 593
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|237809382|ref|YP_002893822.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Tolumonas
auensis DSM 9187]
gi|237501643|gb|ACQ94236.1| NADH dehydrogenase I, D subunit [Tolumonas auensis DSM 9187]
Length = 603
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 10 DYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+++ F + N+ G + + L+ +LR FV + DL D R
Sbjct: 30 QELLHRFPHDILHVQNTRMGIPVVWIKRETLLHAIRYLR-HAAKPFVMLYDLHATDERLR 88
Query: 69 SNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMY 120
++R F + YH LS + N + +KI V +PSI G +P A+W+EREVWDM+
Sbjct: 89 THRQGLPDSEFTMFYHLLSIERNSDVILKIPVMESDLKMPSITGEFPNANWYEREVWDMF 148
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFV-------ELHYDDKVKKVVYRP 169
GI F+GHP L RIL ++G+PLRKD+P E+ D+ ++++++P
Sbjct: 149 GIHFDGHPHLTRILMPRNWKGNPLRKDYPARATEFEPFMLDEMRQDEAQEQLLFKP 204
>gi|28870531|ref|NP_793150.1| NADH dehydrogenase I, subunit C/D [Pseudomonas syringae pv. tomato
str. DC3000]
gi|81730554|sp|Q87ZQ7|NUOCD_PSESM RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|28853779|gb|AAO56845.1| NADH dehydrogenase I, C/D subunit [Pseudomonas syringae pv. tomato
str. DC3000]
gi|330875771|gb|EGH09920.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 593
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|331017273|gb|EGH97329.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 593
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|330965589|gb|EGH65849.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 593
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|255019941|ref|ZP_05292015.1| NADH dehydrogenase I, B/C/D subunits [Acidithiobacillus caldus ATCC
51756]
gi|254970600|gb|EET28088.1| NADH dehydrogenase I, B/C/D subunits [Acidithiobacillus caldus ATCC
51756]
Length = 565
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + + FS + A L + +L +LRDD + + DL +D
Sbjct: 3 LAEALQKEFSATPFTAACD-DCLDFSLPTANLKPCLRYLRDDWRSPYRCLWDLTAMDERP 61
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEG 126
F ++YH + LR+++ + G+ + +Y A+W+EREV+D++G+ F G
Sbjct: 62 SGGGFTLIYHLFNYAVGELLRLRVPLPAGQETAPSLTDLYANANWYEREVYDLFGLRFAG 121
Query: 127 HPDLRRILTDYGFEGHPLRKD 147
HPDLRRIL + GHPLRK+
Sbjct: 122 HPDLRRILLPPQWRGHPLRKE 142
>gi|254241071|ref|ZP_04934393.1| NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa 2192]
gi|126194449|gb|EAZ58512.1| NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa 2192]
Length = 593
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + + F + G L V L+ + +FLR P +V + DL GVD
Sbjct: 17 QDIVVELNSRFGAETFTVQPTHTGMPVLWVPRERLIEVLTFLRQVPK-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREV 116
R++R F V YH +S + N + +K+A++E I+P A+W+EREV
Sbjct: 76 ERLRTHRRGLPSADFSVFYHLMSLERNSDVMIKVALSERDLNLPTATRIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
WDMYGI F GHP L R+L ++GHPLRKD+P Y K +L QE
Sbjct: 136 WDMYGITFTGHPHLTRMLMPPTWQGHPLRKDYPARATEFDPYSLSAAK-----QDLEQEA 190
Query: 177 RDY 179
+
Sbjct: 191 LRF 193
>gi|257459164|ref|ZP_05624283.1| NADH dehydrogenase subunit c [Campylobacter gracilis RM3268]
gi|257443549|gb|EEV18673.1| NADH dehydrogenase subunit c [Campylobacter gracilis RM3268]
Length = 262
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
D D + + + L L V+ ++ L+ + + +L
Sbjct: 30 SANESDFKDDLDALEGVQILNSYVEFNTLVLYVEPAQNLAALRALK---GAGYEILCELS 86
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
GVDF +V Y L K RR R+K V + S GIY A+W ERE++DM G
Sbjct: 87 GVDFTEARGGIEVFYQLLDIKRARRARLKCFVPNESFLQSAAGIYKSANWAERELYDMMG 146
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
++ E HP+L R++ + GHPL K +P+ G + + K
Sbjct: 147 VWIEAHPNLARLIMPDDWFGHPLLKSYPLQGDEFAKWYEVDK 188
>gi|167630266|ref|YP_001680765.1| proton-translocating NADH-ubiquinone oxidoreductase, chain c
[Heliobacterium modesticaldum Ice1]
gi|167593006|gb|ABZ84754.1| proton-translocating NADH-ubiquinone oxidoreductase, chain c
[Heliobacterium modesticaldum Ice1]
Length = 149
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/143 (39%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 13 VNSFSGSVRFAVNSVGELS---LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + ++ V GE + V L+++ LR +P F + DL VD +
Sbjct: 6 QDELAARLQAEVEVTGEGVSRAVVVPKEQLLAVMEKLRREPDFAFDMLSDLTAVDR--KD 63
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
F+VVY S K+ LRVK A + VPS+ GI+PGADW EREV+D+ G+ F GHP
Sbjct: 64 AGFEVVYQLFSLKHRLDLRVKTRTAAEEAQVPSVTGIWPGADWMEREVFDLMGVTFAGHP 123
Query: 129 DLRRILTDYGFEGHPLRKDFPVT 151
++ R+L FEGHPLRKDF +
Sbjct: 124 NMARLLLPDEFEGHPLRKDFKLQ 146
>gi|330972909|gb|EGH72975.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 593
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRINRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|237751581|ref|ZP_04582061.1| trifunctional NADH dehydrogenase I subunit B/C/D [Helicobacter
bilis ATCC 43879]
gi|229372947|gb|EEO23338.1| trifunctional NADH dehydrogenase I subunit B/C/D [Helicobacter
bilis ATCC 43879]
Length = 268
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+E L + + + + + V D+ L+ + + ++
Sbjct: 39 EVLESLQKEVN------ILNSYVEINQAVFYVPKEDVCRALEILK---SMKYNIMSEMSA 89
Query: 63 VDFLSRSNRFDVVYHFLSPKYNR----RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
+D L+ F++ Y S + + RLRVK A+ E +++PS+ GI+ A+W ERE +D
Sbjct: 90 IDNLASDGTFELFYQLTSHEKSHKDRRRLRVKCALKENEAMPSVSGIFACANWSERECYD 149
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
M+GI F HP L+RIL + G+PL K +P+ G
Sbjct: 150 MFGIKFLNHPFLKRILMPIDWVGNPLLKTYPLKG 183
>gi|154148319|ref|YP_001405791.1| NADH dehydrogenase subunit C [Campylobacter hominis ATCC BAA-381]
gi|153804328|gb|ABS51335.1| NADH dehydrogenase subunit c [Campylobacter hominis ATCC BAA-381]
Length = 262
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
D + + + L L + D + + L+ + + + +L GVDF+
Sbjct: 35 KFIDDLNALKDFKILKSYVEFDNLVLFCEKDDNLKILKELK---NLGYTILCELSGVDFI 91
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ +V Y L RR R+K V + + + S ++ A+W ERE++DM G++ +
Sbjct: 92 TSRGGIEVFYQLLDMTRIRRARLKCFVPQKEFLNSATQLFKSANWAERELYDMLGVWIKD 151
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
HP+L RIL + GHPL K +P+ G + + K
Sbjct: 152 HPNLSRILMPDDWYGHPLLKSYPLQGDNFAKWYEIDK 188
>gi|163751848|ref|ZP_02159063.1| NADH dehydrogenase I, C/D subunits [Shewanella benthica KT99]
gi|161328264|gb|EDP99426.1| NADH dehydrogenase I, C/D subunits [Shewanella benthica KT99]
Length = 596
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF------ 65
+ + L+L +D L+ S L+ P F + DL VD
Sbjct: 28 LEQLLGDEAIEQKTADNILTLWIDKHQLIPALSLLKSIPE-PFNFLFDLYAVDERLRLDK 86
Query: 66 -LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
L + F +VY LS + N+ +R+K+A+ + + SI I+P A+W+ERE WD++GI F
Sbjct: 87 ALLPAKDFTLVYQVLSIERNQDVRLKVALEDNEHQASITSIWPSANWYEREAWDLFGIIF 146
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
+ HP+L RIL F+GHPLRK+FP + K+
Sbjct: 147 DAHPNLCRILLPPTFQGHPLRKEFPCRATETEPFTLDDDKLARE 190
>gi|330889658|gb|EGH22319.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. mori str. 301020]
Length = 593
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/163 (38%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNTRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|237800543|ref|ZP_04589004.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023403|gb|EGI03460.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 431
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVIELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|228924033|ref|ZP_04087309.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835523|gb|EEM80888.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 338
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 186 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMELLRFHEGLAFDYMSEL 245
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 246 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 302
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 303 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 331
>gi|148546982|ref|YP_001267084.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas putida F1]
gi|218528054|sp|A5W190|NUOCD_PSEP1 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|148511040|gb|ABQ77900.1| NADH dehydrogenase I, D subunit [Pseudomonas putida F1]
Length = 593
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V L + SFLR + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFVAQETRTGMPVLWVKRAQLKEVLSFLRGVAK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K++++EG + GI+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPAADFSVFYHLLSIERNSDVMIKVSLSEGDLNLPTVTGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKD+P Y
Sbjct: 136 WDMFGIDFAGHPHLSRIMMPPTWEGHPLRKDYPARATEFDPYS 178
>gi|15597835|ref|NP_251329.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas aeruginosa PAO1]
gi|107102159|ref|ZP_01366077.1| hypothetical protein PaerPA_01003209 [Pseudomonas aeruginosa PACS2]
gi|116050626|ref|YP_790555.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas aeruginosa UCBPP-PA14]
gi|218891200|ref|YP_002440066.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas aeruginosa LESB58]
gi|296388900|ref|ZP_06878375.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas aeruginosa PAb1]
gi|313107677|ref|ZP_07793859.1| NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa 39016]
gi|81622299|sp|Q9I0J9|NUOCD_PSEAE RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|122259749|sp|Q02ND1|NUOCD_PSEAB RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|9948707|gb|AAG06027.1|AE004692_6 NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa PAO1]
gi|115585847|gb|ABJ11862.1| NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa UCBPP-PA14]
gi|218771425|emb|CAW27192.1| NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa LESB58]
gi|310880361|gb|EFQ38955.1| NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa 39016]
Length = 593
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + + F G L V L+ + +FLR P +V + DL GVD
Sbjct: 17 QDIVVELNSRFGAETFTVQPTRTGMPVLWVPRERLIEVLTFLRQVPK-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREV 116
R++R F V YH +S + N + +K+A++E I+P A+W+EREV
Sbjct: 76 ERLRTHRRGLPSADFSVFYHLMSLERNSDVMIKVALSERDLNLPTATRIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
WDMYGI F GHP L R+L ++GHPLRKD+P Y K +L QE
Sbjct: 136 WDMYGITFTGHPHLTRMLMPPTWQGHPLRKDYPARATEFDPYSLSAAK-----QDLEQEA 190
Query: 177 RDY 179
+
Sbjct: 191 LRF 193
>gi|284922274|emb|CBG35359.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 042]
Length = 600
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVADFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|257485441|ref|ZP_05639482.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. tabaci ATCC 11528]
gi|330987944|gb|EGH86047.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010725|gb|EGH90781.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 593
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ + F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QEVVVELNTRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|261416513|ref|YP_003250196.1| NADH (or F420H2) dehydrogenase, subunit C [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372969|gb|ACX75714.1| NADH (or F420H2) dehydrogenase, subunit C [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302325864|gb|ADL25065.1| NADH-quinone oxidoreductase, C subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 200
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 85/152 (55%), Gaps = 8/152 (5%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+E++ + F V+ ++ V L + FL+++ F ++D+ G+
Sbjct: 2 TVEEIFAALEGKF--DVKREPLDKWGVTAVVAAPYLHNAVQFLKEESGIKFDMLVDIAGI 59
Query: 64 DFLSRSNR----FDVVYHFLSPKYNR-RLRVKIAVAEGK-SVPSIVGIYPGADWFEREVW 117
D+L+ N F V Y F S K R+R+K+ V+E VP+I +Y A+W+EREV+
Sbjct: 60 DYLTYPNHEGPRFAVSYAFKSMKNPGARIRLKVLVSEESLKVPTISDLYANANWYEREVY 119
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
D +G+ FEGHPDLRR+L F GHPLRKD+P
Sbjct: 120 DQFGVIFEGHPDLRRLLNHVEFVGHPLRKDYP 151
>gi|152985448|ref|YP_001347932.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas aeruginosa PA7]
gi|218528052|sp|A6V4E7|NUOCD_PSEA7 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|150960606|gb|ABR82631.1| NADH dehydrogenase I chain C,D [Pseudomonas aeruginosa PA7]
Length = 593
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + + F G L V L+ + +FLR P +V + DL GVD
Sbjct: 17 QDIVVELNSRFGAETFTVQPTRTGMPVLWVPRERLIEVLTFLRQVPK-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREV 116
R++R F V YH +S + N + +K+A++E I+P A+W+EREV
Sbjct: 76 ERLRTHRRGLPNADFSVFYHLMSLERNSDVMIKVALSERDLNLPTATRIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
WDMYGI F GHP L R+L ++GHPLRKD+P Y K +L QE
Sbjct: 136 WDMYGITFTGHPHLTRMLMPPTWQGHPLRKDYPARATEFDPYSLSAAK-----QDLEQEA 190
Query: 177 RDY 179
+
Sbjct: 191 LRF 193
>gi|218233397|ref|YP_002370073.1| NADH dehydrogenase subunit C [Bacillus cereus B4264]
gi|218161354|gb|ACK61346.1| NADH dehydrogenase subunit c [Bacillus cereus B4264]
Length = 421
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 269 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRCHEGLAFDYMSEL 328
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 329 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 385
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 386 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 414
>gi|296505725|ref|YP_003667425.1| NADH dehydrogenase subunit C [Bacillus thuringiensis BMB171]
gi|296326777|gb|ADH09705.1| NADH dehydrogenase subunit C [Bacillus thuringiensis BMB171]
Length = 211
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 59 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 118
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 119 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 175
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 176 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 204
>gi|212712278|ref|ZP_03320406.1| hypothetical protein PROVALCAL_03364 [Providencia alcalifaciens DSM
30120]
gi|212685024|gb|EEB44552.1| hypothetical protein PROVALCAL_03364 [Providencia alcalifaciens DSM
30120]
Length = 600
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS--- 67
+ N F + G + V L+ + FL+ P +V + DL GVD
Sbjct: 30 LRNQFGPDAFSVQATRTGMPVIWVRREQLLEIVDFLKKLPK-PYVMLFDLHGVDERQRIH 88
Query: 68 ----RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
F V YH +S NR + +K+A+ E +V ++P A+W EREVWDM+GI
Sbjct: 89 RQGLPEADFSVFYHIISIDRNRDIMLKVALNENDLNVPSVVSLFPNANWHEREVWDMFGI 148
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRR+L +EGHPLRKD+P
Sbjct: 149 TFQGHPNLRRLLMSPSWEGHPLRKDYP 175
>gi|86152954|ref|ZP_01071159.1| nadh dehydrogenase i chain c [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843839|gb|EAQ61049.1| nadh dehydrogenase i chain c [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|315929522|gb|EFV08715.1| NADH-quinone oxidoreductase [Campylobacter jejuni subsp. jejuni
305]
Length = 263
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSFVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFIADKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K V + + S+ I+ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 106 NLEKKLRVRIKTFVGVKERLQSVAHIFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 166 FGHPLLKTYPLKGDEFARWYEIDK 189
>gi|228961561|ref|ZP_04123171.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798179|gb|EEM45182.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 221
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + G +L VD + LR F + +L
Sbjct: 69 LNQYVEAIREKLGEGALVDSYINKLSKGVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 186 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 214
>gi|153951177|ref|YP_001398859.1| NADH dehydrogenase subunit C [Campylobacter jejuni subsp. doylei
269.97]
gi|152938623|gb|ABS43364.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
doylei 269.97]
Length = 263
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSFVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFIADKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+RVK V + + S+ I+ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 106 NLEKKLRVRVKTFVGVKERLQSVAHIFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 166 FGHPLLKTYPLKGDEFARWYEIDK 189
>gi|86152252|ref|ZP_01070463.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315124987|ref|YP_004066991.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85840741|gb|EAQ57992.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315018709|gb|ADT66802.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 263
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSFVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFIADKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K V + + S+ I+ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 106 NLEKKLRVRIKTFVGVKERLQSVAHIFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 166 FGHPLLKTYPLKGDEFARWYEIDK 189
>gi|283953810|ref|ZP_06371341.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni 414]
gi|283794851|gb|EFC33589.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni 414]
Length = 263
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSYVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFIANKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K + + + S+ I+ GA+W ERE++DM+GIF GHP+L+RIL +
Sbjct: 106 NLEKKLRVRIKTFIGVKERLQSVAHIFKGANWSEREIYDMFGIFIVGHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHP K +P+ G + + K
Sbjct: 166 FGHPFLKTYPLKGDEFARWYEIDK 189
>gi|229112710|ref|ZP_04242246.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock1-15]
gi|228670842|gb|EEL26150.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock1-15]
Length = 211
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 59 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 118
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 119 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 175
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 176 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 204
>gi|71735882|ref|YP_275281.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|123635949|sp|Q48H52|NUOCD_PSE14 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|71556435|gb|AAZ35646.1| NADH-quinone oxidoreductase, C/D subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 593
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNTHFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A++E SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATELDPYS 178
>gi|86149391|ref|ZP_01067622.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88596523|ref|ZP_01099760.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni 84-25]
gi|121613082|ref|YP_001001217.1| NADH dehydrogenase subunit C [Campylobacter jejuni subsp. jejuni
81-176]
gi|167006110|ref|ZP_02271868.1| NADH dehydrogenase subunit C [Campylobacter jejuni subsp. jejuni
81-176]
gi|85840173|gb|EAQ57431.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|87249700|gb|EAQ72659.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni 81-176]
gi|88191364|gb|EAQ95336.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni 84-25]
gi|284926772|gb|ADC29124.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 263
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSFVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFIADKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K V + + S+ ++ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 106 NLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 166 FGHPLLKTYPLKGDEFARWYEIDK 189
>gi|57238590|ref|YP_179721.1| NADH dehydrogenase subunit C [Campylobacter jejuni RM1221]
gi|148925723|ref|ZP_01809411.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
CG8486]
gi|57167394|gb|AAW36173.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni
RM1221]
gi|145845733|gb|EDK22824.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315059027|gb|ADT73356.1| NADH-ubiquinone oxidoreductase chain C [Campylobacter jejuni subsp.
jejuni S3]
Length = 263
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSFVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFIASKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K V + + S+ ++ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 106 NLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 166 FGHPLLKTYPLKGDEFARWYEIDK 189
>gi|291326665|ref|ZP_06125358.2| NADH-quinone oxidoreductase, C/D subunit [Providencia rettgeri DSM
1131]
gi|291313439|gb|EFE53892.1| NADH-quinone oxidoreductase, C/D subunit [Providencia rettgeri DSM
1131]
Length = 600
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS--- 67
+ N F + G L V L+ + FL+ P +V + DL GVD
Sbjct: 30 LRNQFGPDAFSVQATRTGMPVLWVRREQLLEVVDFLKKLPK-PYVMLFDLHGVDERQRIH 88
Query: 68 ----RSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGI 122
F V YH +S NR + +K+A+ E +VPSIV ++P A+W EREVWDM+GI
Sbjct: 89 RQGLPEADFSVFYHLISIDRNRDIMLKVALNEKDLNVPSIVSLFPNANWHEREVWDMFGI 148
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRR+L +EGHPLRKD+P
Sbjct: 149 TFQGHPNLRRLLMSPSWEGHPLRKDYP 175
>gi|218563166|ref|YP_002344946.1| NADH dehydrogenase subunit C [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|112360873|emb|CAL35674.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|315927677|gb|EFV07008.1| NADH-quinone oxidoreductase [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 264
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 50 ILNSFVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFIADKNGFEVFYQLL 106
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K V + + S+ ++ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 107 NLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 166
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 167 FGHPLLKTYPLKGDEFARWYEIDK 190
>gi|92115245|ref|YP_575173.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Chromohalobacter salexigens DSM 3043]
gi|122419106|sp|Q1QST4|NUOCD_CHRSD RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|91798335|gb|ABE60474.1| NADH dehydrogenase subunit C / NADH dehydrogenase subunit D
[Chromohalobacter salexigens DSM 3043]
Length = 592
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 10 DYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ F V A + G L +D L+ + +FLRD P F + DL G+D R
Sbjct: 20 QALFARFGQHVFVAQATHTGMPVLWLDREYLLEVLNFLRDMPE-PFEMLFDLHGIDERLR 78
Query: 69 SNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMY 120
S+R F V Y +S NR + +K+A+ VPS+ G+YP A+W+EREVWDM+
Sbjct: 79 SHREDLPPADFTVFYQLMSISRNRDIMLKVALSERDLEVPSVAGVYPNANWYEREVWDMF 138
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
GI F GHP L R+L + GHPLRKD+P
Sbjct: 139 GIDFRGHPHLTRLLMPPTWNGHPLRKDYP 167
>gi|228955544|ref|ZP_04117548.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228804166|gb|EEM50781.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 211
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 59 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 118
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 119 HATDFVTHME---VYVHLFSYSKKQSVAVKVKLDRETPQVESVTALWKGADWPEREAYDL 175
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 176 LGIIFKGHPNLTRILMPEDWVGYPLRKDY 204
>gi|167034689|ref|YP_001669920.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas putida GB-1]
gi|218528055|sp|B0KMY0|NUOCD_PSEPG RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|166861177|gb|ABY99584.1| NADH dehydrogenase I, D subunit [Pseudomonas putida GB-1]
Length = 593
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V L + SFLR + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFVAQETRTGMPVLWVKRAQLKEVLSFLRGVAK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K++++EG + GI+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPAADFSVFYHLLSVERNSDVMIKVSLSEGDLNLPTVTGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKD+P Y
Sbjct: 136 WDMFGIDFAGHPHLSRIMMPPTWEGHPLRKDYPARATEFDPYS 178
>gi|255318318|ref|ZP_05359553.1| NADH dehydrogenase, D subunit [Acinetobacter radioresistens SK82]
gi|262379062|ref|ZP_06072218.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter
radioresistens SH164]
gi|255304630|gb|EET83812.1| NADH dehydrogenase, D subunit [Acinetobacter radioresistens SK82]
gi|262298519|gb|EEY86432.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter
radioresistens SH164]
Length = 595
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + F + ++ V+ + + FLR +V + DL +D
Sbjct: 22 IVEELKTKFGENFYVQPTCENFPTVWVERARVQEVLMFLRTVSK-PYVMLFDLSAMDERL 80
Query: 68 RSNR-------FDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDM 119
R +R F V YH LS + N +R+K+A+ ++ +I I+P A+W+ERE +DM
Sbjct: 81 RQHRDGLPASDFTVFYHLLSLERNTDIRIKVALNEHDLNLGTITNIWPNANWYEREAYDM 140
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GI FEGHP LRRIL +EGHPLRK++ Y K Y QEH +
Sbjct: 141 FGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDKAKQDYE-----QEHLRF 195
>gi|283956949|ref|ZP_06374421.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
1336]
gi|283791450|gb|EFC30247.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
1336]
Length = 263
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSFIELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFVADKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K V + + S+ ++ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 106 NLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 166 FGHPLLKTYPLKGDEFARWYEIDK 189
>gi|327403946|ref|YP_004344784.1| NADH dehydrogenase subunit C [Fluviicola taffensis DSM 16823]
gi|327319454|gb|AEA43946.1| NADH dehydrogenase subunit C [Fluviicola taffensis DSM 16823]
Length = 168
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 2 VRKI--EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+ + E + + F ++R G L++++ L ++L+ D +
Sbjct: 1 MSNLTNETVLARLQEKFGDAIRNHEEPYGLLTIEIQAEKAHDLIAWLKADDVLKMSFLTL 60
Query: 60 LCGVDFLSRSNR-FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
+ V+F + +R V YH S +N RLR++ + + SI IY GADW ERE +
Sbjct: 61 IGAVNFPNDKDRELCVNYHIHSLSHNVRLRIRAFLPIENPTIKSIRDIYIGADWQERETY 120
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
D +G+ FEGHP+L RIL + + P+RK++ +
Sbjct: 121 DFFGVIFEGHPNLTRILNEDSMDYFPMRKEYHL 153
>gi|320323790|gb|EFW79874.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. glycinea str. B076]
gi|320327929|gb|EFW83934.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 593
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/163 (38%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNTHFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|229007605|ref|ZP_04165200.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus mycoides
Rock1-4]
gi|228753743|gb|EEM03186.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus mycoides
Rock1-4]
Length = 209
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSG-SVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I S+ + +L V+ + + L+ F + +L
Sbjct: 57 LDAYVKIIKEKTGEHSLVDYYINKLSKDVPTLVVEPKNYYEVMELLKCHEGLAFDYMSEL 116
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ V V SI ++ GA+W ERE +D+
Sbjct: 117 HATDFVTHME---VYVHLFSYGKRQSVAVKVKVDREAPRVASIAPLWHGANWPEREAYDL 173
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
G+ FEGHP+L RIL + G+PLRKD+
Sbjct: 174 LGVVFEGHPNLTRILMPDDWAGYPLRKDY 202
>gi|229050969|ref|ZP_04194519.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH676]
gi|228722427|gb|EEL73822.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH676]
Length = 250
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 98 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 157
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 158 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 214
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 215 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 243
>gi|326577025|gb|EGE26920.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis 101P30B1]
Length = 582
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG---- 62
D+ + + F+ V + G ++ VD ++ + FLR P FV ++DL
Sbjct: 10 DILNELNAKFTNLVVQ-ETADGIPTVWVDKRAVLDVLLFLRTLPK-PFVMLVDLSAIDER 67
Query: 63 ---VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM
Sbjct: 68 LRQYRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDM 127
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+G+ F+GHP L RIL +EGHPLRK++
Sbjct: 128 FGVVFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|218900424|ref|YP_002448835.1| NADH dehydrogenase subunit c [Bacillus cereus G9842]
gi|218541032|gb|ACK93426.1| NADH dehydrogenase subunit c [Bacillus cereus G9842]
Length = 412
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 260 LNQYVEAIREKVGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 319
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + + V S+ ++ GADW ERE +D+
Sbjct: 320 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREEPQVESVTALWKGADWPEREAYDL 376
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 377 LGIVFKGHPNLTRILMPDDWVGHPLRKDY 405
>gi|82702144|ref|YP_411710.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Nitrosospira multiformis ATCC 25196]
gi|123544778|sp|Q2YAA3|NUOCD_NITMU RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|82410209|gb|ABB74318.1| NADH dehydrogenase subunit D / NADH dehydrogenase subunit C
[Nitrosospira multiformis ATCC 25196]
Length = 608
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLS 80
+ V + + +L+ + + DL +D +R +R F V+YH LS
Sbjct: 54 DLPTQWVSRNRVHEVLHYLKLKAERPYRMLYDLTAIDERTRVHREDQPASRFTVIYHLLS 113
Query: 81 PKYNRRLRVKI-AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ N + +K+ +P+I I+P A+W+ERE+WDM+GI F+GHP LRRIL +
Sbjct: 114 FERNADVCLKVALTDTDLRMPTITDIWPAANWYEREIWDMFGIVFDGHPHLRRILLPPWW 173
Query: 140 EGHPLRKDFPVTGFVELH 157
+GH LRKD P E+
Sbjct: 174 QGHALRKDHPARA-TEME 190
>gi|229147838|ref|ZP_04276180.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-ST24]
gi|228635666|gb|EEK92154.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-ST24]
Length = 221
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 69 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 186 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 214
>gi|294056097|ref|YP_003549755.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Coraliomargarita
akajimensis DSM 45221]
gi|293615430|gb|ADE55585.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Coraliomargarita
akajimensis DSM 45221]
Length = 203
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ F S L+++ + L + LRDD + ++D+ +D+ + S
Sbjct: 7 ALLKERF--EFLTERESADHLAVNCPADKWIELATALRDD--FAYDMVVDVTAIDWDAES 62
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAE--GKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
RF +YHFLS + LRV + + +PSI +Y ADW ERE +D+ GI +EGH
Sbjct: 63 PRFTGIYHFLSTTKHVYLRVAVNCEDDINPVLPSIAPLYASADWHERETYDLMGIRYEGH 122
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTG 152
P+L+RIL + HPLRKDFP+ G
Sbjct: 123 PELKRILMWDDYPYHPLRKDFPLAG 147
>gi|226944920|ref|YP_002799993.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Azotobacter vinelandii DJ]
gi|259514699|sp|C1DL16|NUOCD_AZOVD RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226719847|gb|ACO79018.1| NADH-ubiquinone oxidoreductase, chain cd [Azotobacter vinelandii
DJ]
Length = 593
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 65/183 (35%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + + F + L V L+ + FLR+ P +V + DL GVD
Sbjct: 17 QDVVAELNSRFGAETFTVQSTCTDMPVLWVAREKLIEVLRFLRNLPR-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K+A+ E +PS GI+P A+W+ERE+
Sbjct: 76 ERLRTQRRGLPEADFSVFYHLLSIERNSDVMIKVALKEGDLKLPSATGIWPNANWYEREI 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
WDMYGI EGHP L RIL +EGHPLRKD+P Y K +L QE
Sbjct: 136 WDMYGIHIEGHPHLTRILMPPTWEGHPLRKDYPARATEFDPYSLSAAK-----QDLEQEA 190
Query: 177 RDY 179
+
Sbjct: 191 LRF 193
>gi|251789016|ref|YP_003003737.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Dickeya
zeae Ech1591]
gi|247537637|gb|ACT06258.1| NADH dehydrogenase I, D subunit [Dickeya zeae Ech1591]
Length = 599
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + FL+ P +V ++DL GVD R++R
Sbjct: 34 PDAFTVQATRTGLPVVWVKREQLLDVVVFLKKQPK-PYVMLLDLHGVDERLRTHRQGLPD 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
F V YH +S + NR + +K+A++E ++P++ ++P A+W+EREVWDM+GI F+GHP
Sbjct: 93 ADFTVFYHLISIERNRDIMLKVALSENDLTMPTLTKLFPNANWYEREVWDMFGITFKGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ ++GHPLRKDFP
Sbjct: 153 HLTRIMMPQTWQGHPLRKDFP 173
>gi|229153462|ref|ZP_04281640.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus m1550]
gi|228630066|gb|EEK86717.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus m1550]
Length = 421
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 269 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 328
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 329 HATDFVTHME---VYVHLFSYSKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 385
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 386 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 414
>gi|157415793|ref|YP_001483049.1| NADH dehydrogenase subunit C [Campylobacter jejuni subsp. jejuni
81116]
gi|157386757|gb|ABV53072.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
81116]
gi|307748432|gb|ADN91702.1| NADH-quinone oxidoreductase, C subunit [Campylobacter jejuni subsp.
jejuni M1]
gi|315931257|gb|EFV10227.1| NADH dehydrogenase subunit C [Campylobacter jejuni subsp. jejuni
327]
Length = 263
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +++ D V L+ +++ + +DF++ N F+V Y L
Sbjct: 49 ILNSFVELDFWVIEIKKEDNVKTLQMLKT---LGYLSFTEASAIDFVADKNGFEVFYQLL 105
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + R+R+K V + + S+ ++ GA+W ERE++DM+GIF HP+L+RIL +
Sbjct: 106 NLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDDW 165
Query: 140 EGHPLRKDFPVTGFVELHYDDKVK 163
GHPL K +P+ G + + K
Sbjct: 166 FGHPLLKTYPLKGDEFARWYEIDK 189
>gi|150017835|ref|YP_001310089.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149904300|gb|ABR35133.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 145
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + E+L + + + + ++++ + + + ++ F ++DL
Sbjct: 1 MSKTCENLILELKAEYKQDIE--IIENTQIAIHTEASKFLDVIKKVK---QYGFDFLVDL 55
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
++ + VYHF+S + +R+K+ + E +PS+ + A+ ERE +D++
Sbjct: 56 TAIE----DDVLSCVYHFMSLTTHELIRIKVKLNEKLEIPSLTKYWLAANVQEREAYDLF 111
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F GHPDL+RIL F GHPLRKDF
Sbjct: 112 GINFIGHPDLKRILCPDDFVGHPLRKDF 139
>gi|262376775|ref|ZP_06070003.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter lwoffii
SH145]
gi|262308485|gb|EEY89620.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter lwoffii
SH145]
Length = 595
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + F + ++ V+ + + FLR +V + DL VD
Sbjct: 22 IIEELKTKFGENFFVQTTFEDFPTVWVERARVQEVLMFLRTVSR-PYVMLFDLSAVDERL 80
Query: 68 RSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDM 119
R++R F V YH LS + N +R+K+A+AE I+P A+W+ERE +DM
Sbjct: 81 RTHRDGLPASDFTVFYHLLSLERNTDIRIKVALAESDLNLPTATNIWPNANWYEREAYDM 140
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GI FEGHP LRRIL +EGHPLRK++ Y K Y QEH +
Sbjct: 141 FGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYLQDKAKQDYE-----QEHLRF 195
>gi|229130549|ref|ZP_04259505.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-Cer4]
gi|228652888|gb|EEL08770.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-Cer4]
Length = 381
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 229 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 288
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 289 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 345
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 346 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 374
>gi|325277476|ref|ZP_08143081.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas sp. TJI-51]
gi|324097392|gb|EGB95633.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas sp. TJI-51]
Length = 593
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V L + SFLR + + DL GVD
Sbjct: 17 QDVVVELHNRFGAEAFVAQETRTGMPVLWVKRAQLKEVLSFLRGVAK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K++++EG + I+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPAADFSVFYHLLSIERNSDVMIKVSLSEGDLNLPSVTSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKD+P Y
Sbjct: 136 WDMFGIDFAGHPHLSRIMMPPTWEGHPLRKDYPARATEFDPYS 178
>gi|229193549|ref|ZP_04320494.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus ATCC
10876]
gi|228589938|gb|EEK47812.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus ATCC
10876]
Length = 233
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 81 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMELLRFHEGLAFDYMSEL 140
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 141 HATDFVTHME---VYVHLFSYSKKQSVAVKVKIDREAPQVESVTALWKGADWPEREAYDL 197
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 198 LGIVFKGHPNLTRILMPEDWVGYPLRKDY 226
>gi|49480404|ref|YP_039289.1| NADH dehydrogenase subunit C [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49331960|gb|AAT62606.1| NADH dehydrogenase I, subunit C (NADH-quinone oxidoreductase, chain
C) [Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 449
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 297 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 356
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 357 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 413
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 414 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 442
>gi|30023331|ref|NP_834962.1| NADH dehydrogenase subunit C [Bacillus cereus ATCC 14579]
gi|29898892|gb|AAP12163.1| NADH-quinone oxidoreductase chain C [Bacillus cereus ATCC 14579]
Length = 413
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 261 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 320
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 321 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 377
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 378 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 406
>gi|330940384|gb|EGH43488.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 377
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|32267100|ref|NP_861132.1| NADH dehydrogenase subunit C [Helicobacter hepaticus ATCC 51449]
gi|32263152|gb|AAP78198.1| donor-ubiquinone reductase I [Helicobacter hepaticus ATCC 51449]
Length = 247
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ I + + + +L V+ + +L L + + ++ +
Sbjct: 31 ALTGFESEINT-ITTPISESYIQNDLATLWVESTYIFALIKELH---SLGYEILTEMSAI 86
Query: 64 DFLSRSNRFDVVYHFLSPKYN--RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
D L N F++ Y L + +RL++K + +G+ + S+ ++ A+W ERE +DM+G
Sbjct: 87 DKLEECNEFELFYLLLKLEDTSSKRLKIKTKIKKGQQISSLTPLFKSANWSERECYDMFG 146
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
I F GHP L+R++ + GHPL K +P+ G
Sbjct: 147 IIFNGHPYLQRLIMPKDWVGHPLLKSYPLQG 177
>gi|329765843|ref|ZP_08257409.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137686|gb|EGG41956.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 196
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+DL D IV F + A + ++V D+ + FLRD F ++ + GVD+
Sbjct: 38 KDLADKIVEKFGTKTKIAFVKPDRVGINVGKDDIKEVAEFLRD--ALNFDHVESVSGVDY 95
Query: 66 LSRSNRFDVVYHFLSPKYN-------------RRLRVKIAVAEGKSVPSIVGIYPGADWF 112
+VVYH S + +R I + +PS+ I+ ++
Sbjct: 96 PQ-DKEIEVVYHLGSYTDSSLSRQILVLATRAQREENPIPGNDSTKLPSLREIFYSVEFH 154
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTG 152
ERE+++M+G++F+GHPD RR+L + PLRKDF + G
Sbjct: 155 EREIFEMFGVYFQGHPDNRRLLLPEDWADLPPLRKDFAIKG 195
>gi|219669766|ref|YP_002460201.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfitobacterium
hafniense DCB-2]
gi|219540026|gb|ACL21765.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfitobacterium
hafniense DCB-2]
Length = 163
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+L V+ + V V + L L V + + ++ + D+ GVD
Sbjct: 4 NELLKKRVDELASRVSGTVEEILDTLVLTVKAPYITETLTAVKSFGEVPCDFLHDIGGVD 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIF 123
L F VVY S + ++LRVK V V + I+ GAD+ ERE +DM+GI
Sbjct: 64 KLDH---FQVVYQLTSLRGPQKLRVKAIVDRDNPVIDSVTRIWAGADFMEREAYDMFGIQ 120
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
F+GHP+L+RI FEG PLRKD+ VT E+
Sbjct: 121 FKGHPNLKRIYMWDDFEGFPLRKDY-VTEPAEVR 153
>gi|229158858|ref|ZP_04286916.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus ATCC
4342]
gi|228624842|gb|EEK81611.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus ATCC
4342]
Length = 375
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 223 LNQYVEVIKGKVGEEILIDSYINKLSKDVPTLVVEPSKYYEVMELLRSHEELAFDYMSEL 282
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 283 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 339
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 340 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 368
>gi|228942444|ref|ZP_04104982.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228982013|ref|ZP_04142307.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
Bt407]
gi|228777774|gb|EEM26047.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
Bt407]
gi|228817285|gb|EEM63372.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 198
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSG-SVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + + +L VD + LR F + +L
Sbjct: 46 LNQYVEAIREKLGKGALVDSYINKLSKDVPTLVVDPAKYYEVMESLRFHEGLAFDYMSEL 105
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S R + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 106 HATDFVTHME---VYVHLFSYGKKRSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 162
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 163 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 191
>gi|229082513|ref|ZP_04214976.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus Rock4-2]
gi|228700945|gb|EEL53468.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus Rock4-2]
Length = 379
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 227 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 286
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 287 HATDFVTHME---VYVHLFSYSKKQSVAVKVKLDRETPQVESVTALWKGADWPEREAYDL 343
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 344 LGIIFKGHPNLTRILMPEDWVGYPLRKDY 372
>gi|300717649|ref|YP_003742452.1| NADH dehydrogenase I subunit C/D [Erwinia billingiae Eb661]
gi|299063485|emb|CAX60605.1| NADH dehydrogenase I subunit C/D [Erwinia billingiae Eb661]
Length = 599
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPDAFTVQPTRTGVPVVWVKREQLLEIVEFLRKLPK-PYVMLYDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YHF+S + NR + +K+A++E VP++ I+ A+W+ERE W+M+GI
Sbjct: 87 RAGLPAADFSVFYHFISIERNRDIMLKVALSENDLHVPTVTKIFANANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQDWEGHPLRKDYP 173
>gi|104782523|ref|YP_609021.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas entomophila L48]
gi|122402718|sp|Q1I7Z8|NUOCD_PSEE4 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|95111510|emb|CAK16230.1| NADH dehydrogenase I chain C, D [Pseudomonas entomophila L48]
Length = 593
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V L + SFLR + + DL GVD
Sbjct: 17 QDVVVELHNRFGADAFVAQETRTGMPVLWVKRAQLKEVLSFLRGVAK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K++++EG + GI+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPAADFSVFYHLLSVERNSDVMIKVSLSEGDLNLPTVTGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKD+P Y
Sbjct: 136 WDMFGIDFAGHPHLSRIMMPPTWEGHPLRKDYPARATEFDPYS 178
>gi|326574006|gb|EGE23955.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis CO72]
Length = 582
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG---- 62
D+ + + F+ V + G ++ VD ++ + FLR P FV ++DL
Sbjct: 10 DILNELNAKFTNLVVQ-ETADGIPTVWVDKRAVLDVLLFLRTLPK-PFVMLVDLSTIDER 67
Query: 63 ---VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM
Sbjct: 68 LRQYRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDM 127
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+G+ F+GHP L RIL +EGHPLRK++
Sbjct: 128 FGVVFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|260598703|ref|YP_003211274.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Cronobacter turicensis z3032]
gi|260217880|emb|CBA32430.1| NADH-quinone oxidoreductase subunit C/D [Cronobacter turicensis
z3032]
Length = 599
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGEFLRKLPK-PYVMLYDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH LS NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 87 RNGLPAADFSVFYHLLSIDRNRDIMLKVALSENDLNVPTFTRLFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F GHP+LRRI+ +EGHPLRKD+P
Sbjct: 147 TFTGHPNLRRIMMPPTWEGHPLRKDYP 173
>gi|156933124|ref|YP_001437040.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Cronobacter sakazakii ATCC BAA-894]
gi|218528045|sp|A7MH24|NUOCD_ENTS8 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|156531378|gb|ABU76204.1| hypothetical protein ESA_00934 [Cronobacter sakazakii ATCC BAA-894]
Length = 603
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G+D R++
Sbjct: 32 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGEFLRKLPK-PYVMLYDLHGMDERLRTH 90
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH LS NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 91 RNGLPAADFSVFYHLLSIDRNRDIMLKVALSENDLNVPTFTRLFPNANWYERETWEMFGI 150
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F GHP+LRRI+ +EGHPLRKD+P
Sbjct: 151 TFTGHPNLRRIMMPPTWEGHPLRKDYP 177
>gi|304311497|ref|YP_003811095.1| NADH dehydrogenase I, chain CD [gamma proteobacterium HdN1]
gi|301797230|emb|CBL45450.1| NADH dehydrogenase I, chain CD [gamma proteobacterium HdN1]
Length = 600
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGEL-SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + F + L +L V+ LV++ FLR+ P +V ++DL +D
Sbjct: 24 HAIVRELYQRFGEGAFVFQTNRDRLPTLWVERSQLVAVLKFLREAPK-PYVMLLDLSAID 82
Query: 65 FL-------SRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
+ F V YH +S + N +R+K+A+ ++P+I+ I+P A+W+EREV
Sbjct: 83 ERLRQHREGQPKSDFTVFYHLVSIERNSDVRIKVALSESDLNLPTIISIWPNANWYEREV 142
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFV-------ELHYDDKVKKVVYRP 169
+D++GI FEGHP ++RIL +EGHPLRKD+P + D+ + + ++P
Sbjct: 143 FDLFGIKFEGHPHMQRILLPRYWEGHPLRKDYPARATEFDPFMLNDARQDEAEQALDFKP 202
>gi|52140264|ref|YP_086567.1| NADH dehydrogenase subunit C [Bacillus cereus E33L]
gi|51973733|gb|AAU15283.1| NADH dehydrogenase I, subunit C (NADH-quinone oxidoreductase, chain
C) [Bacillus cereus E33L]
Length = 409
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 257 LNQYVEVIKEKIGEDILVDSYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 316
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 317 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 373
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 374 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 402
>gi|228917907|ref|ZP_04081443.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228841704|gb|EEM86815.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 369
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M + + I ++ S +L V+ + LR F
Sbjct: 212 MNEPYLNQYVEVIKGKIGEAILVDSYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFD 271
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFER 114
+ +L DF++ V H S + + VK+ + V S+ ++ GADW ER
Sbjct: 272 YMSELHATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPER 328
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
E +D+ GI F+GHP+L RIL + GHPLRKD+
Sbjct: 329 EAYDLLGIVFKGHPNLSRILMPDDWVGHPLRKDY 362
>gi|320161225|ref|YP_004174449.1| putative NADH-quinone oxidoreductase subunit C/D [Anaerolinea
thermophila UNI-1]
gi|319995078|dbj|BAJ63849.1| putative NADH-quinone oxidoreductase chain C/D [Anaerolinea
thermophila UNI-1]
Length = 581
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
++ F ++ E + V L+ LRD + + + GVD+L
Sbjct: 13 LIEYFPDWLQKDERPGYEGYI-VPAEHLLEFAQALRD--RFGYDLLSSVTGVDYLPEGKM 69
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V + + E VPS+V I+PGAD+ ERE WD+ GI FEGHPDLR
Sbjct: 70 EVVYHALQTTGGPLLNFKVQVSRENPVVPSVVSIWPGADFQEREAWDLLGIRFEGHPDLR 129
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
RIL GF GHPLRKD + E +++++ K
Sbjct: 130 RILMWEGFAGHPLRKD-----WKEPYFEEEAK 156
>gi|75762935|ref|ZP_00742739.1| NADH-quinone oxidoreductase chain C [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228903772|ref|ZP_04067889.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
IBL 4222]
gi|74489577|gb|EAO52989.1| NADH-quinone oxidoreductase chain C [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228855861|gb|EEN00404.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
IBL 4222]
Length = 221
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I V S +L VD + LR F + +L
Sbjct: 69 LNQYVEAIREKVGEGVLVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREEPQVESVTALWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 186 LGIIFKGHPNLTRILMPDDWVGHPLRKDY 214
>gi|196036318|ref|ZP_03103716.1| NADH dehydrogenase i, subunit c [Bacillus cereus W]
gi|195991110|gb|EDX55080.1| NADH dehydrogenase i, subunit c [Bacillus cereus W]
Length = 363
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ S +L V+ + LR F + +L
Sbjct: 211 LNQYVEVIKGKIGEAILVDSYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 270
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 271 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 327
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 328 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 356
>gi|50121949|ref|YP_051116.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pectobacterium atrosepticum SCRI1043]
gi|81644465|sp|Q6D2R9|NUOCD_ERWCT RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|49612475|emb|CAG75925.1| NADH-quinone oxidoreductase chain C/D [Pectobacterium atrosepticum
SCRI1043]
Length = 599
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + +FL+ P +V + DL G+D R++R
Sbjct: 34 PDAFTVQATRTGIPVVWVKREQLLDVVTFLKKQPK-PYVMLFDLHGMDERLRTHREGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V YH +S + NR + +K+A+ +P++ ++P A+W+ERE W+M+G+ F+GHP
Sbjct: 93 ADYSVFYHLISIERNRDIMLKVALAENDMHLPTVTKLFPNANWYERETWEMFGMAFDGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
+L RI+ +EGHPLRKD+P
Sbjct: 153 NLTRIMMPKTWEGHPLRKDYP 173
>gi|222824436|ref|YP_002576010.1| NADH-quinone oxidoreductase, C subunit [Campylobacter lari RM2100]
gi|222539657|gb|ACM64758.1| NADH-quinone oxidoreductase, C subunit [Campylobacter lari RM2100]
Length = 264
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ F ++ + + ++++ D V++ L+ + + D +DF+++
Sbjct: 42 QILSQEF--ELKNSFIELDFWVIEINKDDNVAILDKLK---NLGYSCFTDASAIDFVAQK 96
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
F+V Y L+ + N R+RVK V + + S++ ++ GA+W ERE++DM+GIF H +
Sbjct: 97 QGFEVYYQLLNMEKNLRVRVKTFVGLKERLQSVMSVFKGANWCEREIYDMFGIFIINHAN 156
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
L+R+L + GHP K +P+ G + + K
Sbjct: 157 LKRLLMPDDWYGHPYLKSYPLHGDEFAKWYEIDK 190
>gi|256422833|ref|YP_003123486.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Chitinophaga pinensis DSM 2588]
gi|256037741|gb|ACU61285.1| NADH dehydrogenase I, D subunit [Chitinophaga pinensis DSM 2588]
Length = 580
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 1 MVRKIEDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + + F +++ + G L+L + D+V+ FL+ + ++++ D
Sbjct: 1 MQTAENHILTLLHQRFGLDALQQQNTADGLLTLWIGKADIVNTVQFLQQN---AYLSLYD 57
Query: 60 LCGVDFLSRSN-------RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADW 111
LCG+D R+ F VVY LS K N +R+K+ + I I+P A+W
Sbjct: 58 LCGIDERDRARKEQLPVADFSVVYLLLSFKDNSFIRLKVPLTGEYPSLPSITAIFPNANW 117
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL----HYDDKVK 163
+ERE++DM+GI FEGHP L+RIL ++GHPLRK+ P E+ +D+K
Sbjct: 118 YEREIYDMFGIRFEGHPHLQRILMPQSWQGHPLRKEHPARA-TEIGPFRLWDEKQD 172
>gi|47569793|ref|ZP_00240464.1| NADH dehydrogenase I, C/D subunit [Bacillus cereus G9241]
gi|47553535|gb|EAL11915.1| NADH dehydrogenase I, C/D subunit [Bacillus cereus G9241]
Length = 283
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 131 LNQYVEVIKGKMGEEILIDSYINKLSKDVPTLVVEPSKYYEVMELLRSHEELAFDYMSEL 190
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 191 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 247
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 248 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 276
>gi|313206214|ref|YP_004045391.1| NADH dehydrogenase subunit c [Riemerella anatipestifer DSM 15868]
gi|312445530|gb|ADQ81885.1| NADH dehydrogenase subunit C [Riemerella anatipestifer DSM 15868]
gi|315023101|gb|EFT36114.1| NADH (or F420H2) dehydrogenase, subunit C [Riemerella anatipestifer
RA-YM]
gi|325336339|gb|ADZ12613.1| NADH:ubiquinone oxidoreductase 27 kD subunit [Riemerella
anatipestifer RA-GD]
Length = 164
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ I F +V G L+L+V ++ L L+D + D+CG+ +
Sbjct: 8 EAINREFPEAVLSVSEPHGLLTLEVKKEEVKKLIHHLKD-SSLEIGFLTDICGIHYPQDK 66
Query: 70 -NRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
V+YH + K N R+R+K+ + + V +I +Y GA+W ERE +D YGI F+GH
Sbjct: 67 AKELGVIYHLHNMKTNFRVRLKVFMPIEEAEVDTISDLYSGANWMERETFDFYGIRFKGH 126
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
PDLR IL D HP+ K + + D K
Sbjct: 127 PDLRIILNDPDMGYHPMLKQYRLEDGT--REDKDDK 160
>gi|228994017|ref|ZP_04153919.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus pseudomycoides
DSM 12442]
gi|228765815|gb|EEM14467.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus pseudomycoides
DSM 12442]
Length = 209
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSG-SVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I S+ + +L V+ + + L+ F + +L
Sbjct: 57 LDAYVKIIKEKTGEHSLVDYYINKLSKDVPTLVVEPKNYYEVMELLKCHEGLAFDYMSEL 116
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ V V SI ++ GA+W ERE +D+
Sbjct: 117 HATDFVTHME---VYVHLFSYGKRQSVAVKVKVDREAPRVASIAPLWHGANWPEREAYDL 173
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
G+ FEGHP+L RIL + G+PLRKD+
Sbjct: 174 LGVVFEGHPNLTRILMPDDWAGYPLRKDY 202
>gi|196039562|ref|ZP_03106867.1| NADH dehydrogenase subunit c [Bacillus cereus NVH0597-99]
gi|196029722|gb|EDX68324.1| NADH dehydrogenase subunit c [Bacillus cereus NVH0597-99]
Length = 415
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M + + I + S +L V+ + LR F
Sbjct: 258 MNEPYLNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFD 317
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFER 114
+ +L DF++ V H S + + VK+ + V S+ ++ GADW ER
Sbjct: 318 YMSELHATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPER 374
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
E +D+ GI F+GHP+L RIL + GHPLRKD+
Sbjct: 375 EAYDLLGIVFKGHPNLSRILMPDDWVGHPLRKDY 408
>gi|271501266|ref|YP_003334291.1| NADH dehydrogenase I subunit D [Dickeya dadantii Ech586]
gi|270344821|gb|ACZ77586.1| NADH dehydrogenase I, D subunit [Dickeya dadantii Ech586]
Length = 599
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + FL+ P +V ++DL GVD R++R
Sbjct: 34 PEAFTIQATRTGLPVVWVKREQLLDVVVFLKKQPK-PYVMLLDLHGVDERLRTHRQGLPD 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
F V YHF+S + NR + +K+A++E +P++ ++P A+W+EREVWDM+GI F+GHP
Sbjct: 93 ADFTVFYHFISIERNRDIMLKVALSENDLNMPTLTKLFPNANWYEREVWDMFGITFKGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ ++GHPLRKDFP
Sbjct: 153 HLTRIMMPQTWQGHPLRKDFP 173
>gi|326777316|ref|ZP_08236581.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Streptomyces cf.
griseus XylebKG-1]
gi|326657649|gb|EGE42495.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Streptomyces cf.
griseus XylebKG-1]
Length = 489
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ L D + + F A ++ L++DV D ++ RD+ C + L
Sbjct: 16 AEAYDSLPDGVADVFGAEAT-AESAYDLLTVDVPAADWLTALRTARDELGCSY--FDWLS 72
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMY 120
VD R L RRL V+ V +V + +Y GA W ERE +M+
Sbjct: 73 AVDEPGVGFRVCAHVAALGTGAVRRLMVRTTVPHDAAVLPTAIDVYAGAAWHERETHEMF 132
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
G+ F+GHP L +L GFEGHPLRKDF +
Sbjct: 133 GVAFDGHPHLVPLLLPEGFEGHPLRKDFVLA 163
>gi|42784468|ref|NP_981715.1| NADH dehydrogenase subunit C [Bacillus cereus ATCC 10987]
gi|42740400|gb|AAS44323.1| NADH dehydrogenase I, C subunit, putative [Bacillus cereus ATCC
10987]
Length = 481
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + +L V+ + LR F + +L
Sbjct: 329 LNQYVEVIKGKVGEDALVDCYINKLSKDVPTLVVEPSKYYEVMELLRSHEELAFDYMSEL 388
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 389 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTPLWKGADWPEREAYDL 445
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 446 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 474
>gi|242239966|ref|YP_002988147.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Dickeya
dadantii Ech703]
gi|242132023|gb|ACS86325.1| NADH dehydrogenase I, D subunit [Dickeya dadantii Ech703]
Length = 599
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 8 LGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ + N F + G + V L+ + +FL+ P +V ++DL GVD
Sbjct: 24 IVSELCNRFGSEAFTVQATRTGMPVVWVKREQLLEVVAFLKKQPK-PYVMLLDLHGVDER 82
Query: 67 SRSNR-------FDVVYHFLSPKYNRRLRVKI-AVAEGKSVPSIVGIYPGADWFEREVWD 118
R++R F V YH +S + N+ + +K+ V + ++P++ ++P A+W+EREVWD
Sbjct: 83 LRTHRQGLPDADFTVFYHLISIERNKDIMLKVALVEKDLNMPTLTKLFPNANWYEREVWD 142
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
MYGI F GHP L RI+ +EGHPLRKDFP
Sbjct: 143 MYGITFNGHPHLTRIMMPQTWEGHPLRKDFP 173
>gi|87306371|ref|ZP_01088518.1| NADH dehydrogenase I, 30 kDa subunit [Blastopirellula marina DSM
3645]
gi|87290550|gb|EAQ82437.1| NADH dehydrogenase I, 30 kDa subunit [Blastopirellula marina DSM
3645]
Length = 176
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F V + ++V+ G +V LC +LRD F +C VD+
Sbjct: 4 KQFIERLEKRFGDLVARVELEAIDPWIEVEPGGVVELCRYLRDAEDLRFNYCNSICVVDY 63
Query: 66 LS----------RSNRFDVVYHFLSPKYNRRLRVKIAVA--------EGKSVPSIVGIYP 107
S +VVYH S +Y L VK+ + + VPS+ GI+
Sbjct: 64 FEPDAKKAAKTAWSPHLEVVYHLSSIQYKTTLVVKVMLPRWKDGVPGQLPEVPSVSGIWS 123
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
ADW ERE +D+ G++F GHP+L+RIL + G+PLRKD+ +
Sbjct: 124 TADWHEREAYDLSGVWFTGHPNLQRILCPEDWVGYPLRKDYEM 166
>gi|228930304|ref|ZP_04093310.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229094407|ref|ZP_04225480.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-42]
gi|228689008|gb|EEL42834.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-42]
gi|228829363|gb|EEM74994.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 158
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M + + I + S +L V+ + LR F
Sbjct: 1 MNEPYLNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFD 60
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFER 114
+ +L DF++ V H S + + VK+ + V S+ ++ GADW ER
Sbjct: 61 YMSELHATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPER 117
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
E +D+ GI F+GHP+L RIL + GHPLRKD+
Sbjct: 118 EAYDLLGIVFKGHPNLSRILMPDDWVGHPLRKDY 151
>gi|218906475|ref|YP_002454309.1| NADH dehydrogenase subunit c [Bacillus cereus AH820]
gi|218538005|gb|ACK90403.1| NADH dehydrogenase subunit c [Bacillus cereus AH820]
Length = 387
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 235 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 294
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 295 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 351
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 352 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 380
>gi|209765088|gb|ACI80856.1| NADH dehydrogenase I chain C/D [Escherichia coli]
gi|320646501|gb|EFX15420.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H- str. 493-89]
gi|320651598|gb|EFX19978.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H- str. H 2687]
Length = 600
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|30265321|ref|NP_847698.1| NADH dehydrogenase subunit C [Bacillus anthracis str. Ames]
gi|47530859|ref|YP_022208.1| NADH dehydrogenase subunit C [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188134|ref|YP_031387.1| NADH dehydrogenase subunit C [Bacillus anthracis str. Sterne]
gi|65317274|ref|ZP_00390233.1| COG0852: NADH:ubiquinone oxidoreductase 27 kD subunit [Bacillus
anthracis str. A2012]
gi|170708850|ref|ZP_02899285.1| putative NADH dehydrogenase (ubiquinone), C subunit [Bacillus
anthracis str. A0389]
gi|229604336|ref|YP_002869513.1| putative NADH dehydrogenase (ubiquinone), C subunit [Bacillus
anthracis str. A0248]
gi|30259999|gb|AAP29184.1| putative NADH dehydrogenase (ubiquinone), C subunit [Bacillus
anthracis str. Ames]
gi|47506007|gb|AAT34683.1| putative NADH dehydrogenase (ubiquinone), C subunit [Bacillus
anthracis str. 'Ames Ancestor']
gi|49182061|gb|AAT57437.1| NADH dehydrogenase I, C subunit, putative [Bacillus anthracis str.
Sterne]
gi|170126250|gb|EDS95142.1| putative NADH dehydrogenase (ubiquinone), C subunit [Bacillus
anthracis str. A0389]
gi|229268744|gb|ACQ50381.1| putative NADH dehydrogenase (ubiquinone), C subunit [Bacillus
anthracis str. A0248]
Length = 317
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 165 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 224
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 225 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 281
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 282 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 310
>gi|254794178|ref|YP_003079015.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. TW14359]
gi|254593578|gb|ACT72939.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli O157:H7
str. TW14359]
Length = 596
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYP 170
>gi|196045684|ref|ZP_03112914.1| NADH dehydrogenase subunit c [Bacillus cereus 03BB108]
gi|196023515|gb|EDX62192.1| NADH dehydrogenase subunit c [Bacillus cereus 03BB108]
Length = 385
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 233 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 292
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 293 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 349
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 350 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 378
>gi|118480338|ref|YP_897489.1| NADH dehydrogenase subunit C [Bacillus thuringiensis str. Al Hakam]
gi|118419563|gb|ABK87982.1| NADH dehydrogenase subunit C [Bacillus thuringiensis str. Al Hakam]
Length = 387
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 235 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 294
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 295 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 351
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 352 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 380
>gi|15802833|ref|NP_288860.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 EDL933]
gi|15832424|ref|NP_311197.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. Sakai]
gi|168748135|ref|ZP_02773157.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4113]
gi|168755038|ref|ZP_02780045.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4401]
gi|168761275|ref|ZP_02786282.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4501]
gi|168767912|ref|ZP_02792919.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4486]
gi|168772988|ref|ZP_02797995.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4196]
gi|168780141|ref|ZP_02805148.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4076]
gi|168787193|ref|ZP_02812200.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC869]
gi|168798456|ref|ZP_02823463.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC508]
gi|195935663|ref|ZP_03081045.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. EC4024]
gi|208807369|ref|ZP_03249706.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4206]
gi|208814268|ref|ZP_03255597.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4045]
gi|208820998|ref|ZP_03261318.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4042]
gi|209398773|ref|YP_002271695.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4115]
gi|217327314|ref|ZP_03443397.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. TW14588]
gi|261223260|ref|ZP_05937541.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. FRIK2000]
gi|261259190|ref|ZP_05951723.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. FRIK966]
gi|291283527|ref|YP_003500345.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O55:H7
str. CB9615]
gi|81765938|sp|Q8XCW9|NUOCD_ECO57 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737314|sp|B5YXS6|NUOCD_ECO5E RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|12516636|gb|AAG57415.1|AE005460_9 NADH dehydrogenase I chain C, D [Escherichia coli O157:H7 str.
EDL933]
gi|13362640|dbj|BAB36593.1| NADH dehydrogenase I chain C/D [Escherichia coli O157:H7 str.
Sakai]
gi|187771332|gb|EDU35176.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4196]
gi|188017237|gb|EDU55359.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4113]
gi|189002209|gb|EDU71195.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4076]
gi|189357692|gb|EDU76111.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4401]
gi|189362958|gb|EDU81377.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4486]
gi|189368302|gb|EDU86718.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4501]
gi|189372802|gb|EDU91218.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC869]
gi|189379012|gb|EDU97428.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC508]
gi|208727170|gb|EDZ76771.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4206]
gi|208735545|gb|EDZ84232.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4045]
gi|208741121|gb|EDZ88803.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4042]
gi|209160173|gb|ACI37606.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. EC4115]
gi|209765090|gb|ACI80857.1| NADH dehydrogenase I chain C/D [Escherichia coli]
gi|209765092|gb|ACI80858.1| NADH dehydrogenase I chain C/D [Escherichia coli]
gi|209765094|gb|ACI80859.1| NADH dehydrogenase I chain C/D [Escherichia coli]
gi|209765096|gb|ACI80860.1| NADH dehydrogenase I chain C/D [Escherichia coli]
gi|217319681|gb|EEC28106.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O157:H7
str. TW14588]
gi|290763400|gb|ADD57361.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli O55:H7
str. CB9615]
gi|320192093|gb|EFW66738.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. EC1212]
gi|320641113|gb|EFX10592.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. G5101]
gi|320657350|gb|EFX25152.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320663052|gb|EFX30369.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O55:H7 str. USDA 5905]
gi|320667870|gb|EFX34778.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. LSU-61]
gi|326339637|gb|EGD63448.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. 1125]
gi|326344099|gb|EGD67860.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O157:H7 str. 1044]
Length = 600
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|254724275|ref|ZP_05186059.1| NADH dehydrogenase subunit c [Bacillus anthracis str. A1055]
Length = 353
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 201 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 260
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 261 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 317
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 318 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 346
>gi|167636399|ref|ZP_02394699.1| NADH dehydrogenase i, subunit c [Bacillus anthracis str. A0442]
gi|170689320|ref|ZP_02880514.1| NADH dehydrogenase i, subunit c [Bacillus anthracis str. A0465]
gi|254686279|ref|ZP_05150138.1| NADH dehydrogenase subunit c [Bacillus anthracis str. CNEVA-9066]
gi|254744430|ref|ZP_05202110.1| NADH dehydrogenase subunit c [Bacillus anthracis str. Kruger B]
gi|167528233|gb|EDR91015.1| NADH dehydrogenase i, subunit c [Bacillus anthracis str. A0442]
gi|170666688|gb|EDT17457.1| NADH dehydrogenase i, subunit c [Bacillus anthracis str. A0465]
Length = 353
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 201 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 260
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 261 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 317
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 318 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 346
>gi|9719439|gb|AAF97799.1|AF281148_3 NADH dehydrogenase I subunit C [Pseudomonas fluorescens]
Length = 200
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 6 EDLGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V LV + +FLR+ P +V + DL GVD
Sbjct: 17 QDVVVELNNRFGPEAFTAQPTRTGMPVLWVARAKLVEVLTFLRNLPK-PYVMLYDLHGVD 75
Query: 65 F--------LSRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFERE 115
L F V YH +S + N + +K+A+ SVP++ GI+P A+W+ERE
Sbjct: 76 ERLRTKRQGLPDGVDFTVFYHLMSIERNSDVMIKVALSESDLSVPTVTGIWPNANWYERE 135
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
VWDM+GI F GHP L RI+ +EGHPLRKD
Sbjct: 136 VWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKD 167
>gi|301058553|ref|ZP_07199558.1| NADH dehydrogenase subunit D [delta proteobacterium NaphS2]
gi|300447285|gb|EFK11045.1| NADH dehydrogenase subunit D [delta proteobacterium NaphS2]
Length = 583
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGEL-SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ + F + ++ + +L V + +L+ + + DL +D
Sbjct: 5 IIQELKKQFGPEILAEQATIDGIPTLWVARQAAPRVLRYLKTQISDPYAMLYDLTAIDER 64
Query: 67 SRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
R R F VVYH LS + N +R+K+ + + I G++P ADW+ERE WD
Sbjct: 65 ERHQREGQPDSAFTVVYHLLSFERNSDIRIKVPLMDPHPSLPSITGLWPAADWYEREAWD 124
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
++GI F+GH +L+RIL +EGHPLRK++P E+
Sbjct: 125 LFGITFDGHQNLKRILLPSTWEGHPLRKEYPARA-TEV 161
>gi|165869963|ref|ZP_02214620.1| NADH dehydrogenase subunit c [Bacillus anthracis str. A0488]
gi|167641703|ref|ZP_02399947.1| NADH dehydrogenase subunit c [Bacillus anthracis str. A0193]
gi|177654049|ref|ZP_02936059.1| NADH dehydrogenase subunit c [Bacillus anthracis str. A0174]
gi|190567729|ref|ZP_03020641.1| NADH dehydrogenase subunit c [Bacillus anthracis Tsiankovskii-I]
gi|227818061|ref|YP_002818070.1| NADH dehydrogenase subunit c [Bacillus anthracis str. CDC 684]
gi|254735226|ref|ZP_05192935.1| NADH dehydrogenase subunit c [Bacillus anthracis str. Western North
America USA6153]
gi|254755734|ref|ZP_05207767.1| NADH dehydrogenase subunit c [Bacillus anthracis str. Vollum]
gi|254759533|ref|ZP_05211558.1| NADH dehydrogenase subunit c [Bacillus anthracis str. Australia 94]
gi|164714286|gb|EDR19806.1| NADH dehydrogenase subunit c [Bacillus anthracis str. A0488]
gi|167510328|gb|EDR85730.1| NADH dehydrogenase subunit c [Bacillus anthracis str. A0193]
gi|172080932|gb|EDT66011.1| NADH dehydrogenase subunit c [Bacillus anthracis str. A0174]
gi|190561145|gb|EDV15118.1| NADH dehydrogenase subunit c [Bacillus anthracis Tsiankovskii-I]
gi|227005134|gb|ACP14877.1| NADH dehydrogenase subunit c [Bacillus anthracis str. CDC 684]
Length = 351
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 199 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 258
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 259 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 315
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 316 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 344
>gi|301056765|ref|YP_003794976.1| NADH dehydrogenase I subunit C [Bacillus anthracis CI]
gi|300378934|gb|ADK07838.1| NADH dehydrogenase I, C subunit [Bacillus cereus biovar anthracis
str. CI]
Length = 421
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 269 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 328
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 329 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 385
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 386 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 414
>gi|326565200|gb|EGE15386.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis 103P14B1]
Length = 522
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG---- 62
D+ + + F+ V + G ++ VD ++ + FLR P FV ++DL
Sbjct: 10 DILNELNAKFTNLVVQ-ETADGIPTVWVDKRAVLDVLLFLRTLPK-PFVMLVDLSTIDER 67
Query: 63 ---VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM
Sbjct: 68 LRQYRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDM 127
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+G+ F+GHP L RIL +EGHPLRK++
Sbjct: 128 FGVVFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|332088416|gb|EGI93534.1| NADH-quinone oxidoreductase subunit C/D [Shigella boydii 5216-82]
Length = 600
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|228949018|ref|ZP_04111291.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228810774|gb|EEM57122.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 263
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ S +L V+ + LR F + +L
Sbjct: 111 LNQYVEVIKGKIGEAILVDSYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 170
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 171 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 227
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 228 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 256
>gi|187731573|ref|YP_001881107.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
boydii CDC 3083-94]
gi|218534334|sp|B2TW67|NUOCD_SHIB3 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|187428565|gb|ACD07839.1| NADH-quinone oxidoreductase, C/D subunit [Shigella boydii CDC
3083-94]
Length = 600
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|228911138|ref|ZP_04074944.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
IBL 200]
gi|228848501|gb|EEM93349.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
IBL 200]
Length = 418
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 266 LNQYVEAIREKVGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 325
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ V V S+ ++ GADW ERE +D+
Sbjct: 326 HATDFVTHME---VYVHLFSYGKKQSVAVKVKVDREAPQVESVTALWKGADWPEREAYDL 382
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 383 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 411
>gi|302130364|ref|ZP_07256354.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 189
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V+ L + +FLR+ P + + DL GVD
Sbjct: 17 QDVVVELNNRFGAEAFTAQPTRTGMPVLWVERARLFEILTFLRNVPQ-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREV 116
R+NR F V YH LS + N + +K+A+ SVP+I I+P A+W+EREV
Sbjct: 76 ERLRTNRRGLPGADFTVFYHLLSIERNSDVMIKVALSESDLSVPTITSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKDFP Y
Sbjct: 136 WDMFGIDFPGHPHLSRIMMPPTWEGHPLRKDFPARATEFDPYS 178
>gi|222034042|emb|CAP76783.1| NadH-quinone oxidoreductase subunit C/D [Escherichia coli LF82]
gi|307554348|gb|ADN47123.1| NADH dehydrogenase I chain C/D [Escherichia coli ABU 83972]
Length = 596
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYP 170
>gi|229181546|ref|ZP_04308872.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus 172560W]
gi|228601914|gb|EEK59409.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus 172560W]
Length = 413
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 261 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDHEKYYEVMESLRFHEGLAFDYMSEL 320
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ V V S+ ++ GADW ERE +D+
Sbjct: 321 HATDFVTHME---VYVHLFSYSKKQSVAVKVKVDRETPQVESVTALWKGADWPEREAYDL 377
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 378 LGIIFKGHPNLTRILMPEDWVGYPLRKDY 406
>gi|333001430|gb|EGK20998.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri VA-6]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|215487499|ref|YP_002329930.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O127:H6 str. E2348/69]
gi|312967584|ref|ZP_07781799.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 2362-75]
gi|254767803|sp|B7UFU4|NUOCD_ECO27 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|215265571|emb|CAS09974.1| NADH: ubiquinone oxidoreductase, chain C, D [Escherichia coli
O127:H6 str. E2348/69]
gi|312287781|gb|EFR15686.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 2362-75]
gi|323187989|gb|EFZ73284.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli RN587/1]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|145698291|ref|NP_416789.2| NADH:ubiquinone oxidoreductase, fused CD subunit [Escherichia coli
str. K-12 substr. MG1655]
gi|238901461|ref|YP_002927257.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli BW2952]
gi|205831468|sp|P33599|NUOCD_ECOLI RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D; AltName: Full=NUO3/NUO4
gi|145693162|gb|AAC75346.2| NADH:ubiquinone oxidoreductase, fused CD subunit [Escherichia coli
str. K-12 substr. MG1655]
gi|238861868|gb|ACR63866.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli BW2952]
Length = 596
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYP 170
>gi|110642490|ref|YP_670220.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli 536]
gi|110806249|ref|YP_689769.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
flexneri 5 str. 8401]
gi|256017558|ref|ZP_05431423.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
sp. D9]
gi|309785010|ref|ZP_07679643.1| NADH-quinone oxidoreductase subunit C/D [Shigella dysenteriae 1617]
gi|122958187|sp|Q0TFG0|NUOCD_ECOL5 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|123048061|sp|Q0T2K1|NUOCD_SHIF8 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|110344082|gb|ABG70319.1| NADH dehydrogenase I chain C/D [Escherichia coli 536]
gi|110615797|gb|ABF04464.1| NADH dehydrogenase I chain C, D [Shigella flexneri 5 str. 8401]
gi|308927380|gb|EFP72854.1| NADH-quinone oxidoreductase subunit C/D [Shigella dysenteriae 1617]
gi|313651109|gb|EFS15508.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri 2a str.
2457T]
gi|313848704|emb|CAQ32688.2| NADH:ubiquinone oxidoreductase, chain CD, subunit of connecting
fragment of NADH dehydrogenase I and NADH:ubiquinone
oxidoreductase I [Escherichia coli BL21(DE3)]
gi|323156436|gb|EFZ42591.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli EPECa14]
gi|323184395|gb|EFZ69771.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 1357]
gi|332093480|gb|EGI98538.1| NADH-quinone oxidoreductase subunit C/D [Shigella boydii 3594-74]
gi|332766105|gb|EGJ96315.1| nuoC [Shigella flexneri 2930-71]
Length = 596
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYP 170
>gi|26248673|ref|NP_754713.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli CFT073]
gi|91211578|ref|YP_541564.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli UTI89]
gi|117624475|ref|YP_853388.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli APEC O1]
gi|218559199|ref|YP_002392112.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli S88]
gi|218690446|ref|YP_002398658.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli ED1a]
gi|227887342|ref|ZP_04005147.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli 83972]
gi|237704760|ref|ZP_04535241.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia sp. 3_2_53FAA]
gi|300983381|ref|ZP_07176565.1| NADH dehydrogenase, D subunit [Escherichia coli MS 45-1]
gi|301049039|ref|ZP_07196024.1| NADH dehydrogenase, D subunit [Escherichia coli MS 185-1]
gi|306814603|ref|ZP_07448765.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli NC101]
gi|331647941|ref|ZP_08349033.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli M605]
gi|81475490|sp|Q8FFJ7|NUOCD_ECOL6 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|122423114|sp|Q1R9D1|NUOCD_ECOUT RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528041|sp|A1ADD4|NUOCD_ECOK1 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737313|sp|B7MG50|NUOCD_ECO45 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|254767805|sp|B7MXG5|NUOCD_ECO81 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|26109078|gb|AAN81281.1|AE016763_240 NADH dehydrogenase I chain C/D [Escherichia coli CFT073]
gi|91073152|gb|ABE08033.1| NADH dehydrogenase I chain C/D [Escherichia coli UTI89]
gi|115513599|gb|ABJ01674.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli APEC
O1]
gi|218365968|emb|CAR03712.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli S88]
gi|218428010|emb|CAR08781.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli ED1a]
gi|226901126|gb|EEH87385.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia sp. 3_2_53FAA]
gi|227835692|gb|EEJ46158.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli 83972]
gi|281179373|dbj|BAI55703.1| NADH dehydrogenase I chain C/D [Escherichia coli SE15]
gi|294493326|gb|ADE92082.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli IHE3034]
gi|300299148|gb|EFJ55533.1| NADH dehydrogenase, D subunit [Escherichia coli MS 185-1]
gi|300408547|gb|EFJ92085.1| NADH dehydrogenase, D subunit [Escherichia coli MS 45-1]
gi|305851997|gb|EFM52449.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli NC101]
gi|307626178|gb|ADN70482.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli UM146]
gi|312946904|gb|ADR27731.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli O83:H1 str. NRG 857C]
gi|315285914|gb|EFU45352.1| NADH dehydrogenase, D subunit [Escherichia coli MS 110-3]
gi|315292241|gb|EFU51593.1| NADH dehydrogenase, D subunit [Escherichia coli MS 153-1]
gi|315298115|gb|EFU57384.1| NADH dehydrogenase, D subunit [Escherichia coli MS 16-3]
gi|320196153|gb|EFW70777.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli WV_060327]
gi|323952079|gb|EGB47953.1| NADH dehydrogenase [Escherichia coli H252]
gi|323956052|gb|EGB51805.1| NADH dehydrogenase [Escherichia coli H263]
gi|330912111|gb|EGH40621.1| NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone
oxidoreductase chain D [Escherichia coli AA86]
gi|331043665|gb|EGI15803.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli M605]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|89109104|ref|AP_002884.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli str.
K-12 substr. W3110]
gi|170081903|ref|YP_001731223.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli str.
K-12 substr. DH10B]
gi|256022030|ref|ZP_05435895.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia sp. 4_1_40B]
gi|300948570|ref|ZP_07162663.1| NADH dehydrogenase, D subunit [Escherichia coli MS 116-1]
gi|300956454|ref|ZP_07168743.1| NADH dehydrogenase, D subunit [Escherichia coli MS 175-1]
gi|301026956|ref|ZP_07190349.1| NADH dehydrogenase, D subunit [Escherichia coli MS 196-1]
gi|301647617|ref|ZP_07247413.1| NADH dehydrogenase, D subunit [Escherichia coli MS 146-1]
gi|307138950|ref|ZP_07498306.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli H736]
gi|312973455|ref|ZP_07787627.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 1827-70]
gi|331642924|ref|ZP_08344059.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli H736]
gi|218528039|sp|B1X8Z8|NUOCD_ECODH RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|85675344|dbj|BAA16115.2| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli str.
K12 substr. W3110]
gi|169889738|gb|ACB03445.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli str.
K-12 substr. DH10B]
gi|260448621|gb|ACX39043.1| NADH dehydrogenase I, D subunit [Escherichia coli DH1]
gi|299879503|gb|EFI87714.1| NADH dehydrogenase, D subunit [Escherichia coli MS 196-1]
gi|300316724|gb|EFJ66508.1| NADH dehydrogenase, D subunit [Escherichia coli MS 175-1]
gi|300451918|gb|EFK15538.1| NADH dehydrogenase, D subunit [Escherichia coli MS 116-1]
gi|301074244|gb|EFK89050.1| NADH dehydrogenase, D subunit [Escherichia coli MS 146-1]
gi|309702598|emb|CBJ01926.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli ETEC
H10407]
gi|310332050|gb|EFP99285.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 1827-70]
gi|315136920|dbj|BAJ44079.1| NADH:ubiquinone oxidoreductase, chain C, D [Escherichia coli DH1]
gi|315615555|gb|EFU96187.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 3431]
gi|323936576|gb|EGB32863.1| NADH dehydrogenase [Escherichia coli E1520]
gi|323941017|gb|EGB37204.1| NADH dehydrogenase [Escherichia coli E482]
gi|331039722|gb|EGI11942.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli H736]
gi|332344067|gb|AEE57401.1| NADH oxidoreductase NuoD [Escherichia coli UMNK88]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|24113658|ref|NP_708168.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
flexneri 2a str. 301]
gi|30063712|ref|NP_837883.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
flexneri 2a str. 2457T]
gi|74312804|ref|YP_311223.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
sonnei Ss046]
gi|82544764|ref|YP_408711.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
boydii Sb227]
gi|82777694|ref|YP_404043.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
dysenteriae Sd197]
gi|157158752|ref|YP_001463629.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli E24377A]
gi|157161774|ref|YP_001459092.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli HS]
gi|170019405|ref|YP_001724359.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli ATCC 8739]
gi|170682181|ref|YP_001744484.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli SMS-3-5]
gi|188495926|ref|ZP_03003196.1| NADH-quinone oxidoreductase, D subunit [Escherichia coli 53638]
gi|191166524|ref|ZP_03028354.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli B7A]
gi|191170147|ref|ZP_03031701.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli F11]
gi|193062410|ref|ZP_03043505.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli E22]
gi|193068271|ref|ZP_03049235.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli E110019]
gi|194427148|ref|ZP_03059699.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli B171]
gi|194433330|ref|ZP_03065610.1| NADH-quinone oxidoreductase, C/D subunit [Shigella dysenteriae
1012]
gi|194436293|ref|ZP_03068395.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli 101-1]
gi|209919734|ref|YP_002293818.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli SE11]
gi|218548265|ref|YP_002382056.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia fergusonii ATCC 35469]
gi|218554842|ref|YP_002387755.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli IAI1]
gi|218695885|ref|YP_002403552.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli 55989]
gi|218700760|ref|YP_002408389.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli IAI39]
gi|218705816|ref|YP_002413335.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli UMN026]
gi|253772792|ref|YP_003035623.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162295|ref|YP_003045403.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli B str. REL606]
gi|260844873|ref|YP_003222651.1| NADH:ubiquinone oxidoreductase, chain C, D [Escherichia coli
O103:H2 str. 12009]
gi|260856330|ref|YP_003230221.1| NADH:ubiquinone oxidoreductase, chain C, D [Escherichia coli
O26:H11 str. 11368]
gi|260869009|ref|YP_003235411.1| NADH:ubiquinone oxidoreductase, chain C, D [Escherichia coli
O111:H- str. 11128]
gi|293405752|ref|ZP_06649744.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli FVEC1412]
gi|293415579|ref|ZP_06658222.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli B185]
gi|293446623|ref|ZP_06663045.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli B088]
gi|298381435|ref|ZP_06991034.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli FVEC1302]
gi|300822157|ref|ZP_07102299.1| NADH dehydrogenase, D subunit [Escherichia coli MS 119-7]
gi|300896960|ref|ZP_07115441.1| NADH dehydrogenase, D subunit [Escherichia coli MS 198-1]
gi|300903671|ref|ZP_07121587.1| NADH dehydrogenase, D subunit [Escherichia coli MS 84-1]
gi|300918549|ref|ZP_07135139.1| NADH dehydrogenase, D subunit [Escherichia coli MS 115-1]
gi|300924545|ref|ZP_07140509.1| NADH dehydrogenase, D subunit [Escherichia coli MS 182-1]
gi|300931361|ref|ZP_07146692.1| NADH dehydrogenase, D subunit [Escherichia coli MS 187-1]
gi|300936851|ref|ZP_07151740.1| NADH dehydrogenase, D subunit [Escherichia coli MS 21-1]
gi|300981072|ref|ZP_07175344.1| NADH dehydrogenase, D subunit [Escherichia coli MS 200-1]
gi|301024084|ref|ZP_07187798.1| NADH dehydrogenase, D subunit [Escherichia coli MS 69-1]
gi|301303255|ref|ZP_07209380.1| NADH dehydrogenase, D subunit [Escherichia coli MS 124-1]
gi|301328778|ref|ZP_07221826.1| NADH dehydrogenase, D subunit [Escherichia coli MS 78-1]
gi|307311154|ref|ZP_07590798.1| NADH dehydrogenase I, D subunit [Escherichia coli W]
gi|309793165|ref|ZP_07687593.1| NADH dehydrogenase, D subunit [Escherichia coli MS 145-7]
gi|331653728|ref|ZP_08354729.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli M718]
gi|331658368|ref|ZP_08359330.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA206]
gi|331663801|ref|ZP_08364711.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA143]
gi|331668984|ref|ZP_08369832.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA271]
gi|331673789|ref|ZP_08374552.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA280]
gi|331678232|ref|ZP_08378907.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli H591]
gi|331683957|ref|ZP_08384553.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli H299]
gi|332278568|ref|ZP_08390981.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
sp. D9]
gi|81724329|sp|Q83QS6|NUOCD_SHIFL RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|123559143|sp|Q31YH5|NUOCD_SHIBS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|123562060|sp|Q32DQ3|NUOCD_SHIDS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|123616692|sp|Q3YZS4|NUOCD_SHISS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528038|sp|A7ZPA0|NUOCD_ECO24 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528040|sp|A8A2F5|NUOCD_ECOHS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528042|sp|B1IXQ6|NUOCD_ECOLC RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528043|sp|B1LLN9|NUOCD_ECOSM RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737315|sp|B7NNW5|NUOCD_ECO7I RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737316|sp|B7M5W5|NUOCD_ECO8A RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737317|sp|B7N5P8|NUOCD_ECOLU RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737318|sp|B6I7N6|NUOCD_ECOSE RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737319|sp|B7LM46|NUOCD_ESCF3 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|254767804|sp|B7LAU8|NUOCD_ECO55 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|24052722|gb|AAN43875.1| NADH dehydrogenase I chain C, D [Shigella flexneri 2a str. 301]
gi|30041967|gb|AAP17693.1| NADH dehydrogenase I chain C, D [Shigella flexneri 2a str. 2457T]
gi|73856281|gb|AAZ88988.1| NADH dehydrogenase I chain C, D [Shigella sonnei Ss046]
gi|81241842|gb|ABB62552.1| NADH dehydrogenase I chain C, D [Shigella dysenteriae Sd197]
gi|81246175|gb|ABB66883.1| NADH dehydrogenase I chain C, D [Shigella boydii Sb227]
gi|157067454|gb|ABV06709.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli HS]
gi|157080782|gb|ABV20490.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli E24377A]
gi|169754333|gb|ACA77032.1| NADH dehydrogenase I, D subunit [Escherichia coli ATCC 8739]
gi|170519899|gb|ACB18077.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli SMS-3-5]
gi|188491125|gb|EDU66228.1| NADH-quinone oxidoreductase, D subunit [Escherichia coli 53638]
gi|190903484|gb|EDV63203.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli B7A]
gi|190909663|gb|EDV69248.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli F11]
gi|192932076|gb|EDV84675.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli E22]
gi|192958550|gb|EDV88989.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli E110019]
gi|194414769|gb|EDX31040.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli B171]
gi|194418424|gb|EDX34513.1| NADH-quinone oxidoreductase, C/D subunit [Shigella dysenteriae
1012]
gi|194425021|gb|EDX41006.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia coli 101-1]
gi|209912993|dbj|BAG78067.1| NADH dehydrogenase I chain C/D [Escherichia coli SE11]
gi|218352617|emb|CAU98398.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli 55989]
gi|218355806|emb|CAQ88419.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia fergusonii
ATCC 35469]
gi|218361610|emb|CAQ99202.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli IAI1]
gi|218370746|emb|CAR18559.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli IAI39]
gi|218432913|emb|CAR13807.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli UMN026]
gi|253323836|gb|ACT28438.1| NADH dehydrogenase I, D subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974196|gb|ACT39867.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli B str.
REL606]
gi|253978363|gb|ACT44033.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli
BL21(DE3)]
gi|257754979|dbj|BAI26481.1| NADH:ubiquinone oxidoreductase, chain C, D [Escherichia coli
O26:H11 str. 11368]
gi|257760020|dbj|BAI31517.1| NADH:ubiquinone oxidoreductase, chain C, D [Escherichia coli
O103:H2 str. 12009]
gi|257765365|dbj|BAI36860.1| NADH:ubiquinone oxidoreductase, chain C, D [Escherichia coli
O111:H- str. 11128]
gi|281601727|gb|ADA74711.1| NADH dehydrogenase I chain C, D [Shigella flexneri 2002017]
gi|291323453|gb|EFE62881.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli B088]
gi|291427960|gb|EFF00987.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli FVEC1412]
gi|291433227|gb|EFF06206.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli B185]
gi|298278877|gb|EFI20391.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli FVEC1302]
gi|300307685|gb|EFJ62205.1| NADH dehydrogenase, D subunit [Escherichia coli MS 200-1]
gi|300359228|gb|EFJ75098.1| NADH dehydrogenase, D subunit [Escherichia coli MS 198-1]
gi|300396740|gb|EFJ80278.1| NADH dehydrogenase, D subunit [Escherichia coli MS 69-1]
gi|300404327|gb|EFJ87865.1| NADH dehydrogenase, D subunit [Escherichia coli MS 84-1]
gi|300414284|gb|EFJ97594.1| NADH dehydrogenase, D subunit [Escherichia coli MS 115-1]
gi|300419263|gb|EFK02574.1| NADH dehydrogenase, D subunit [Escherichia coli MS 182-1]
gi|300458038|gb|EFK21531.1| NADH dehydrogenase, D subunit [Escherichia coli MS 21-1]
gi|300460823|gb|EFK24316.1| NADH dehydrogenase, D subunit [Escherichia coli MS 187-1]
gi|300525287|gb|EFK46356.1| NADH dehydrogenase, D subunit [Escherichia coli MS 119-7]
gi|300841429|gb|EFK69189.1| NADH dehydrogenase, D subunit [Escherichia coli MS 124-1]
gi|300844840|gb|EFK72600.1| NADH dehydrogenase, D subunit [Escherichia coli MS 78-1]
gi|306908660|gb|EFN39157.1| NADH dehydrogenase I, D subunit [Escherichia coli W]
gi|308123451|gb|EFO60713.1| NADH dehydrogenase, D subunit [Escherichia coli MS 145-7]
gi|315061578|gb|ADT75905.1| NADH:ubiquinone oxidoreductase, chain C,D [Escherichia coli W]
gi|315255220|gb|EFU35188.1| NADH dehydrogenase, D subunit [Escherichia coli MS 85-1]
gi|320177168|gb|EFW52180.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
dysenteriae CDC 74-1112]
gi|320199874|gb|EFW74463.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli EC4100B]
gi|323161620|gb|EFZ47505.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli E128010]
gi|323168544|gb|EFZ54224.1| NADH-quinone oxidoreductase subunit C/D [Shigella sonnei 53G]
gi|323176789|gb|EFZ62379.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli 1180]
gi|323377842|gb|ADX50110.1| NADH dehydrogenase I, D subunit [Escherichia coli KO11]
gi|323944799|gb|EGB40865.1| NADH dehydrogenase [Escherichia coli H120]
gi|323961469|gb|EGB57079.1| NADH dehydrogenase [Escherichia coli H489]
gi|323967727|gb|EGB63139.1| NADH dehydrogenase [Escherichia coli M863]
gi|323973009|gb|EGB68203.1| NADH dehydrogenase [Escherichia coli TA007]
gi|323977513|gb|EGB72599.1| NADH dehydrogenase [Escherichia coli TW10509]
gi|324006664|gb|EGB75883.1| NADH dehydrogenase, D subunit [Escherichia coli MS 57-2]
gi|324013174|gb|EGB82393.1| NADH dehydrogenase, D subunit [Escherichia coli MS 60-1]
gi|324020882|gb|EGB90101.1| NADH dehydrogenase, D subunit [Escherichia coli MS 117-3]
gi|324117836|gb|EGC11735.1| NADH dehydrogenase [Escherichia coli E1167]
gi|325496679|gb|EGC94538.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia fergusonii ECD227]
gi|327252556|gb|EGE64215.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli STEC_7v]
gi|331048577|gb|EGI20653.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli M718]
gi|331056616|gb|EGI28625.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA206]
gi|331059600|gb|EGI31577.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA143]
gi|331064178|gb|EGI36089.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA271]
gi|331069062|gb|EGI40454.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli TA280]
gi|331074692|gb|EGI46012.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli H591]
gi|331078909|gb|EGI50111.1| NADH-quinone oxidoreductase subunit C/D (NADHdehydrogenase I
subunit C/D) (NDH-1 subunit C/D) (NUO3/NUO4)
[Escherichia coli H299]
gi|332090616|gb|EGI95712.1| NADH-quinone oxidoreductase subunit C/D [Shigella dysenteriae
155-74]
gi|332100920|gb|EGJ04266.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
sp. D9]
gi|332754934|gb|EGJ85299.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri 4343-70]
gi|332755335|gb|EGJ85699.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri K-671]
gi|332756273|gb|EGJ86624.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri 2747-71]
gi|333001838|gb|EGK21404.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri K-218]
gi|333002653|gb|EGK22213.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri K-272]
gi|333016308|gb|EGK35639.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri K-304]
gi|333016537|gb|EGK35867.1| NADH-quinone oxidoreductase subunit C/D [Shigella flexneri K-227]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|320183381|gb|EFW58233.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
flexneri CDC 796-83]
gi|323171968|gb|EFZ57612.1| NADH-quinone oxidoreductase subunit C/D [Escherichia coli LT-68]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|228975377|ref|ZP_04135933.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228784359|gb|EEM32382.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar thuringiensis str. T01001]
Length = 396
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSG-SVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + + +L VD + LR F + +L
Sbjct: 244 LNQYVEAIREKLGKGALVDSYINKLSKDVPTLVVDPAKYYEVMESLRFHEGLAFDYMSEL 303
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S R + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 304 HATDFVTHME---VYVHLFSYGKKRSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 360
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 361 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 389
>gi|152971214|ref|YP_001336323.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238895803|ref|YP_002920539.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Klebsiella
pneumoniae NTUH-K2044]
gi|262043326|ref|ZP_06016455.1| NADH-quinone oxidoreductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330003558|ref|ZP_08304673.1| NADH dehydrogenase subunit D [Klebsiella sp. MS 92-3]
gi|218528050|sp|A6TBX2|NUOCD_KLEP7 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|150956063|gb|ABR78093.1| NADH dehydrogenase I chain C, D [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238548121|dbj|BAH64472.1| NADH dehydrogenase I chain CD [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259039350|gb|EEW40492.1| NADH-quinone oxidoreductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536898|gb|EGF63197.1| NADH dehydrogenase subunit D [Klebsiella sp. MS 92-3]
Length = 602
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 31 LRNRFGPDAFTVQPTRTGVPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 89
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A++E +P+ ++P A+W+ERE W+M+GI
Sbjct: 90 RDGLPAADFSVFYHLISIDRNRDIMLKVALSENDLHLPTFTKLFPNANWYERETWEMFGI 149
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ +EGHPLRKD+P
Sbjct: 150 TFDGHPNLRRIMMPPTWEGHPLRKDYP 176
>gi|238788652|ref|ZP_04632444.1| NADH-quinone oxidoreductase subunit C/D [Yersinia frederiksenii
ATCC 33641]
gi|238723247|gb|EEQ14895.1| NADH-quinone oxidoreductase subunit C/D [Yersinia frederiksenii
ATCC 33641]
Length = 598
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPDADFSVFYHLLSIERNRDIMLKVALSEKDMHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|324112818|gb|EGC06794.1| NADH dehydrogenase [Escherichia fergusonii B253]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|317492621|ref|ZP_07951048.1| NADH dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919371|gb|EFV40703.1| NADH dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 603
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFL+ P +V + DL G+D R++
Sbjct: 33 LRNRFGPDAFTVQPTRTGMPVVWVKREQLLEVMSFLKKLPK-PYVMLFDLHGMDERLRTH 91
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A+ + +P++ I+P A+W+ERE W+M+G+
Sbjct: 92 RQGLPEADFSVFYHIISIERNRDIMLKVALSEKDMHLPTVTKIFPNANWYERETWEMFGM 151
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 152 TFDGHPHLTRIMMPQSWEGHPLRKDYP 178
>gi|229199420|ref|ZP_04326085.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus m1293]
gi|228584134|gb|EEK42287.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus m1293]
Length = 234
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + +L V+ + LR F + +L
Sbjct: 82 LNQYVEVIKGKVGEDALVDCYINKLSKDVPTLVVEPSKYYEVMELLRFHEGLAFDYMSEL 141
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 142 HATDFMTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 198
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 199 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 227
>gi|152977485|ref|YP_001377002.1| NADH dehydrogenase subunit C [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026237|gb|ABS24007.1| NADH (or F420H2) dehydrogenase, subunit C [Bacillus cytotoxicus NVH
391-98]
Length = 291
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 6 EDLGDYIVNSFSG-SVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
E I ++ + +L V + LR F + +L
Sbjct: 140 EAYAKLIKEKIGEHALVDFYINRLSKDVPTLVVCKEHYYEVMELLRSHERLAFHYMSELH 199
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
DF++ V H S + + + VK+ + V SI ++ GA+W ERE +D+
Sbjct: 200 ATDFVTHME---VYVHLYSYRKKQSVAVKVKLEREAPQVASITPLWEGANWPEREAYDLL 256
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDF 148
G+ F GHP+L RIL + GHPLRKD+
Sbjct: 257 GVIFTGHPNLTRILMPDDWVGHPLRKDY 284
>gi|293410646|ref|ZP_06654222.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli B354]
gi|291471114|gb|EFF13598.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli B354]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE +P+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHLPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|326943096|gb|AEA18992.1| NADH dehydrogenase subunit C [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 304
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSG-SVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + + +L VD + LR F + +L
Sbjct: 152 LNQYVEAIREKLGKGALVDSYINKLSKDVPTLVVDPAKYYEVMESLRFHEGLAFDYMSEL 211
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S R + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 212 HATDFVTHME---VYVHLFSYGKKRSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 268
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 269 LGIVFKGHPNLTRILMPDDWVGYPLRKDY 297
>gi|170721055|ref|YP_001748743.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas putida W619]
gi|218528056|sp|B1J6N2|NUOCD_PSEPW RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|169759058|gb|ACA72374.1| NADH dehydrogenase I, D subunit [Pseudomonas putida W619]
Length = 593
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 6 EDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + N F + G L V L + SFLR + + DL GVD
Sbjct: 17 QDVVVELHNRFGAEAFVAQETRTGMPVLWVKRAQLKEVLSFLRGVSK-PYSMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREV 116
R+ R F V YH LS + N + +K++++EG + GI+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPAADFSVFYHLLSVERNSDVMIKVSLSEGDLNLPTVTGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
WDM+GI F GHP L RI+ +EGHPLRKD+P Y
Sbjct: 136 WDMFGIDFAGHPHLSRIMMPPTWEGHPLRKDYPARATEFDPYS 178
>gi|229000086|ref|ZP_04159656.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus mycoides
Rock3-17]
gi|228759623|gb|EEM08599.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus mycoides
Rock3-17]
Length = 443
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSG-SVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I S+ + +L V+ + + L+ F + +L
Sbjct: 291 LDAYVKIIKEKTGEHSLVDYYINKLSKDVPTLVVEPKNYYEVMELLKCHEGLAFDYMSEL 350
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ V V SI ++ GA+W ERE +D+
Sbjct: 351 HATDFVTHME---VYVHLFSYGKRQSVAVKVKVDREAPRVASIAPLWHGANWPEREAYDL 407
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
G+ FEGHP+L RIL + G+PLRKD+
Sbjct: 408 LGVVFEGHPNLTRILMPDDWAGYPLRKDY 436
>gi|182436716|ref|YP_001824435.1| putative NADH dehydrogenase subunit [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465232|dbj|BAG19752.1| putative NADH dehydrogenase subunit [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 489
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A ++ L++DV D ++ RD+ C + L VD R L
Sbjct: 36 AESAYDLLTVDVPAADWLTALRTARDELGCSY--FDWLSAVDEPGVGFRVCAHVAALGTG 93
Query: 83 YNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RRL V+ V +V + +Y GA W ERE +M+G+ F+GHP L +L GFEG
Sbjct: 94 AVRRLMVRTTVPHDAAVLPSAIDVYAGAAWHERETHEMFGVAFDGHPHLVPLLLPEGFEG 153
Query: 142 HPLRKDFPVT 151
HPLRKDF +
Sbjct: 154 HPLRKDFVLA 163
>gi|170767524|ref|ZP_02901977.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia albertii
TW07627]
gi|170123858|gb|EDS92789.1| NADH-quinone oxidoreductase, C/D subunit [Escherichia albertii
TW07627]
Length = 600
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|300818113|ref|ZP_07098325.1| NADH dehydrogenase, D subunit [Escherichia coli MS 107-1]
gi|300529257|gb|EFK50319.1| NADH dehydrogenase, D subunit [Escherichia coli MS 107-1]
Length = 600
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|206970059|ref|ZP_03231012.1| NADH dehydrogenase subunit c [Bacillus cereus AH1134]
gi|206734636|gb|EDZ51805.1| NADH dehydrogenase subunit c [Bacillus cereus AH1134]
Length = 353
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 201 LNQYVEAIREKLGEGALVDSYINKLSKDVPTLVVDSEKYYEVMESLRFHEGLAFDYMSEL 260
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 261 HATDFVTHME---VYVHLFSYSKKQSVAVKVKLDRETPQVESVTALWKGADWPEREAYDL 317
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 318 LGIIFKGHPNLTRILMPEDWVGYPLRKDY 346
>gi|320102222|ref|YP_004177813.1| NADH dehydrogenase subunit C [Isosphaera pallida ATCC 43644]
gi|319749504|gb|ADV61264.1| NADH dehydrogenase subunit C [Isosphaera pallida ATCC 43644]
Length = 194
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 10 DYIVNSFSGSVRFAVNSV--GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV---- 63
+ + + L + V L++ + L+ + +
Sbjct: 30 EKLAAAVGPEGEGFTVERFRDNLRVRVHPTRLLNALTTLKTQDGFAMLAELGATDYLGYP 89
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ + RF+V Y NR + VK V ++PS+ ++ GADW EREV+D++GI
Sbjct: 90 GRPATAPRFEVHYVLRDLDENRMIIVKTGVDDPDPALPSVTHLWRGADWMEREVFDLFGI 149
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
F HPDLRRIL FE +PLRKD+P+ G E
Sbjct: 150 TFLNHPDLRRILLPDEFESYPLRKDYPLRGRGE 182
>gi|53804525|ref|YP_113818.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Methylococcus capsulatus str. Bath]
gi|81682184|sp|Q608X9|NUOCD_METCA RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|53758286|gb|AAU92577.1| NADH dehydrogenase I, C/D subunits [Methylococcus capsulatus str.
Bath]
Length = 587
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKY 83
+L + LV +LR + + + DL VD R +R + VVYH +S +
Sbjct: 36 TLWLPARILVETIRYLRSEIDRPYALLFDLTAVDERVRKHRDGMPASAYTVVYHLVSLER 95
Query: 84 NRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N +R+KIA+ E IV + P A+W+EREVWDM+GI F+GHP+LRR++ ++GH
Sbjct: 96 NADVRLKIALPETDPALPSIVAVCPAANWYEREVWDMFGIRFDGHPNLRRLIMPPTWQGH 155
Query: 143 PLRKDFPVTGFVELH 157
PLRKD P E+
Sbjct: 156 PLRKDHPARA-TEME 169
>gi|270262812|ref|ZP_06191083.1| NADH-quinone oxidoreductase subunit C/D [Serratia odorifera 4Rx13]
gi|270043496|gb|EFA16589.1| NADH-quinone oxidoreductase subunit C/D [Serratia odorifera 4Rx13]
Length = 598
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL GVD R++
Sbjct: 27 LRNRFGPEAFTVQPTRTGMPVVWVKPDQLLEVMTFLRKQPK-PYVMLFDLHGVDERLRTH 85
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A+ + VP+ ++P A+W+ERE W+M+GI
Sbjct: 86 RDGLPAADFSVFYHLISIERNRDIMLKVALSEKDLHVPTATKVFPNANWYERETWEMFGI 145
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 146 TFDGHPHLTRIMMPQTWEGHPLRKDYP 172
>gi|229072765|ref|ZP_04205965.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus F65185]
gi|228710391|gb|EEL62365.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus F65185]
Length = 221
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 69 LNQYVEDIREKLGEGALVDSYINKLSKDVPTLVVDPEKYYEVMESLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYSKKQSVAVKVKLDRETPQVESVTALWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 186 LGIIFKGHPNLTRILMPEDWVGYPLRKDY 214
>gi|317048937|ref|YP_004116585.1| NADH dehydrogenase I subunit D [Pantoea sp. At-9b]
gi|316950554|gb|ADU70029.1| NADH dehydrogenase I, D subunit [Pantoea sp. At-9b]
Length = 599
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V ++ + FLR P +V + DL G+D R+N
Sbjct: 28 LRNRFGPDAFTVQATRTGIPVVWVKREQILEVIEFLRKLPK-PYVMLYDLHGMDERLRTN 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A++E +P+I I+P A+W+ERE W+M+G+
Sbjct: 87 RAGLPAADFSVFYHLLSIERNRDIMLKVALSENDMHLPTITKIFPNANWYERETWEMFGM 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|123441678|ref|YP_001005662.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|218534238|sp|A1JLG6|NUOCD_YERE8 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|122088639|emb|CAL11434.1| NADH dehydrogenase I chain C/D [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 598
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMTFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPAADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|253689146|ref|YP_003018336.1| NADH dehydrogenase I, D subunit [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259514705|sp|C6DA44|NUOCD_PECCP RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|251755724|gb|ACT13800.1| NADH dehydrogenase I, D subunit [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 599
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + +FL+ P +V + DL G+D R++R
Sbjct: 34 PDAFTVQATRTGIPVVWVKREQLLDVVAFLKKQPK-PYVMLFDLHGMDERLRTHREGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V YH +S + NR + +K+A+ VP++ ++P A+W+ERE W+M+GI F GHP
Sbjct: 93 ADYSVFYHIISIERNRDIMLKVALAESDLHVPTVTKLFPNANWYERETWEMFGITFNGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ + +EGHPLRKD+P
Sbjct: 153 HLTRIMMPHTWEGHPLRKDYP 173
>gi|57168318|ref|ZP_00367452.1| NADH2 dehydrogenase (ubiquinone) I chain C Cj1577c [Campylobacter
coli RM2228]
gi|305432373|ref|ZP_07401535.1| NADH-quinone oxidoreductase subunit C [Campylobacter coli JV20]
gi|57020126|gb|EAL56800.1| NADH2 dehydrogenase (ubiquinone) I chain C Cj1577c [Campylobacter
coli RM2228]
gi|304444412|gb|EFM37063.1| NADH-quinone oxidoreductase subunit C [Campylobacter coli JV20]
Length = 263
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
+ + + +++ D V L ++N + +DF++ N F+V Y
Sbjct: 48 DIINSFIELDFWVIEIKKEDNVKTLQMLHT---LGYLNFTEASAIDFVADKNGFEVFYQL 104
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
L+ + R+RV+ V + + S+ ++ GA+W ERE++DM+GIF HP+L+RIL
Sbjct: 105 LNLEKRLRVRVRTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDD 164
Query: 139 FEGHPLRKDFPVTGFVELHYDDKVK 163
+ GHPL K +P+ G + + K
Sbjct: 165 WYGHPLLKTYPLQGDEFAQWYEIDK 189
>gi|229124801|ref|ZP_04253980.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus 95/8201]
gi|228658676|gb|EEL14337.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus 95/8201]
Length = 345
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 193 LNQYVEVIKGKIGEDILVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 252
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 253 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 309
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 310 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 338
>gi|332971176|gb|EGK10140.1| NADH-quinone oxidoreductase subunit C/D [Psychrobacter sp.
1501(2011)]
Length = 596
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR--- 71
F+G G ++ V DL+ + FLR P +V ++DL +D R +R
Sbjct: 30 KFAGKFTEQFTFDGIPTIWVSRNDLLEILMFLRTLPK-PYVMLLDLSAIDERLRKHRDGL 88
Query: 72 ----FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEG 126
F V YH +S + N +R+K+A++E VP+ I+P A+W+EREVWDM+GI F+G
Sbjct: 89 PASDFTVFYHLMSLERNSDIRIKVALSEDDLKVPTATKIWPNANWYEREVWDMFGITFDG 148
Query: 127 HPDLRRILTDYGFEGHPLRKDF 148
HP L RIL +EGHPLRK++
Sbjct: 149 HPHLTRILLPKYWEGHPLRKEY 170
>gi|300723692|ref|YP_003712999.1| NADH dehydrogenase I subunit C, D [Xenorhabdus nematophila ATCC
19061]
gi|297630216|emb|CBJ90867.1| NADH dehydrogenase I chain C, D [Xenorhabdus nematophila ATCC
19061]
Length = 598
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L ++ +FL+ P +V + DL GVD RS R
Sbjct: 34 PDAFTVQPTRTGMPVVWVKREQLSAVITFLKKLPK-PYVMLFDLHGVDERQRSYRQGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKI-AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
F V YH +S + NR + +K+ V + ++P+I I+P A+W+ERE W+M+GI F GHP
Sbjct: 93 ADFSVFYHLISIERNRDIMLKVALVEQDLNIPTITSIFPNANWYERETWEMFGITFNGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDF 148
+LRRIL +EGHPLRK++
Sbjct: 153 NLRRILMPPTWEGHPLRKEY 172
>gi|261416729|ref|YP_003250412.1| NADH-quinone oxidoreductase, B subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373185|gb|ACX75930.1| NADH-quinone oxidoreductase, B subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302325376|gb|ADL24577.1| NADH-quinone oxidoreductase, B/C subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 419
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
L + ++ D +++ F+++DP +ID+ +D+ + FD+V S + ++ +
Sbjct: 281 LEVMLEKEDYLNVVEFVKNDPEFKMDYLIDVTAIDY---DDHFDMVTMLRSLEIGHKIFL 337
Query: 90 KIAVAEGKSV-------------PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+ + + S+ P+I +YPGA+ EREV+DM+GI FE HPDLRRI D
Sbjct: 338 CVQLKKDFSIDEEKRPTSLLASVPTISHLYPGAEIKEREVYDMFGIKFENHPDLRRIFLD 397
Query: 137 YGFEGHPLRKDF 148
F G+PLRKDF
Sbjct: 398 KDFVGYPLRKDF 409
>gi|222098769|ref|YP_002532827.1| NADH dehydrogenase subunit c [Bacillus cereus Q1]
gi|221242828|gb|ACM15538.1| NADH dehydrogenase I, subunit C (NADH-quinone oxidoreductase, chain
C) [Bacillus cereus Q1]
Length = 451
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + +L V+ + LR F + +L
Sbjct: 299 LNQYVEVIKGKVGEDALVDCYINKLSKDVPTLVVEPSKYYEVMELLRFHEGLAFDYMSEL 358
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 359 HATDFMTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 415
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 416 LGIVFKGHPNLSRILMPDDWVGHPLRKDY 444
>gi|238763928|ref|ZP_04624885.1| NADH-quinone oxidoreductase subunit C/D [Yersinia kristensenii ATCC
33638]
gi|238697896|gb|EEP90656.1| NADH-quinone oxidoreductase subunit C/D [Yersinia kristensenii ATCC
33638]
Length = 598
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMTFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPAADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|307131812|ref|YP_003883828.1| NADH:ubiquinone oxidoreductase subunit C,D [Dickeya dadantii 3937]
gi|306529341|gb|ADM99271.1| NADH:ubiquinone oxidoreductase, chain C,D [Dickeya dadantii 3937]
Length = 599
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + +FL+ P +V + DL GVD R++R
Sbjct: 34 PEAFTVQATRTGLPVVWVKREQLLDVVAFLKKQPK-PYVMLHDLHGVDERLRTHRQGLPD 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
F V YH +S + NR + +K+A++E +P+++ ++P A+W+EREVWDM+GI F+GHP
Sbjct: 93 ADFTVFYHLISIERNRDIMLKVALSENDLNMPTLIKLFPNANWYEREVWDMFGITFKGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ ++GHPLRKDFP
Sbjct: 153 HLTRIMMPQTWQGHPLRKDFP 173
>gi|126666306|ref|ZP_01737285.1| NADH:ubiquinone oxidoreductase, chain C,D [Marinobacter sp. ELB17]
gi|126629107|gb|EAZ99725.1| NADH:ubiquinone oxidoreductase, chain C,D [Marinobacter sp. ELB17]
Length = 595
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
L + F V G L V LV + + LR P F + DL VD
Sbjct: 19 SSLVAMLRERFGDQVLHEQPTLTGMPVLWVSRDALVEVLATLRKLPE-PFEMLFDLSAVD 77
Query: 65 -------FLSRSNRFDVVYHFLSPKYNRRLRVKI-AVAEGKSVPSIVGIYPGADWFEREV 116
F V Y LS NR + +K+ + + S+P+++ +YP A+W+EREV
Sbjct: 78 ERLRSHRHGLPEADFTVFYQLLSVSGNRDIMLKVALLEQDLSLPTVIPVYPNANWYEREV 137
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
WDM+G+ F+GHP+L RIL ++GHPLRKD
Sbjct: 138 WDMFGVRFDGHPNLSRILMPSTWQGHPLRKDH 169
>gi|238794605|ref|ZP_04638212.1| NADH-quinone oxidoreductase subunit C/D [Yersinia intermedia ATCC
29909]
gi|238726091|gb|EEQ17638.1| NADH-quinone oxidoreductase subunit C/D [Yersinia intermedia ATCC
29909]
Length = 598
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMTFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPEADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|330503269|ref|YP_004380138.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas mendocina NK-01]
gi|328917555|gb|AEB58386.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas mendocina NK-01]
Length = 593
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 6 EDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + F G L V L+ + + LR+ P +V + DL GVD
Sbjct: 17 QDVVAELRARFGDDSFTLQATRTGMPVLWVARERLIEVLTCLRNLPR-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREV 116
R+ R F V YH +S + N + +K+A++E I+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPDADFTVFYHLMSLERNSDVMIKVALSERDLNLPTATSIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
WD+YGI F GHP L RI+ +EGHPLRKD+P
Sbjct: 136 WDLYGITFAGHPHLSRIMMPPTWEGHPLRKDYP 168
>gi|157371543|ref|YP_001479532.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Serratia
proteamaculans 568]
gi|218534243|sp|A8GH14|NUOCD_SERP5 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|157323307|gb|ABV42404.1| NADH dehydrogenase I, D subunit [Serratia proteamaculans 568]
Length = 598
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL GVD R++
Sbjct: 27 LRNRFGPEAFTVQPTRTGMPVVWVKPDQLLEVMTFLRKQPK-PYVMLFDLHGVDERLRTH 85
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A+ + VP+ ++P A+W+ERE W+M+GI
Sbjct: 86 RDGLPAADFSVFYHLISIERNRDIMLKVALSEKDLHVPTATKVFPNANWYERETWEMFGI 145
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 146 TFDGHPHLSRIMMPQTWEGHPLRKDYP 172
>gi|261820794|ref|YP_003258900.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pectobacterium wasabiae WPP163]
gi|261604807|gb|ACX87293.1| NADH dehydrogenase I, D subunit [Pectobacterium wasabiae WPP163]
Length = 599
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
S G + V L+ + +FL+ P +V + DL G+D R++R
Sbjct: 34 PDSFTVQATRTGIPVVWVKREQLLDVVTFLKKQPK-PYVMLFDLHGMDERLRTHREGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V YH +S + NR + +K+A+ +P++ ++P A+W+ERE W+M+G+ F+GHP
Sbjct: 93 ADYSVFYHLISIERNRDIMLKVALAESDLHLPTVTKLFPNANWYERETWEMFGMTFDGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
+L RI+ +EGHPLRKD+P
Sbjct: 153 NLTRIMMPQTWEGHPLRKDYP 173
>gi|238753752|ref|ZP_04615113.1| NADH-quinone oxidoreductase subunit C/D [Yersinia ruckeri ATCC
29473]
gi|238707988|gb|EEQ00345.1| NADH-quinone oxidoreductase subunit C/D [Yersinia ruckeri ATCC
29473]
Length = 598
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPDADFSVFYHLLSIERNRDIMLKVALSEKDMHVSTATQIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|229142037|ref|ZP_04270562.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-ST26]
gi|228641326|gb|EEK97632.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-ST26]
Length = 234
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + +L V+ + + LR F + +L
Sbjct: 82 LNQYVEVIKGKVGEGALVDCYINKLSKDVPTLVVEPSEYYEVMELLRSHEELAFDYMSEL 141
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 142 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 198
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 199 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 227
>gi|162421544|ref|YP_001606302.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pestis Angola]
gi|218534246|sp|A9R6L8|NUOCD_YERPG RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|162354359|gb|ABX88307.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis Angola]
Length = 598
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 -------RFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 SQGLPDADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|238751246|ref|ZP_04612740.1| NADH-quinone oxidoreductase subunit C/D [Yersinia rohdei ATCC
43380]
gi|238710520|gb|EEQ02744.1| NADH-quinone oxidoreductase subunit C/D [Yersinia rohdei ATCC
43380]
Length = 598
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMTFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + + + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPEADFSVFYHLLSIERNRDIMLKVALSEKDLHLSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|227326165|ref|ZP_03830189.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 599
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + +FL+ P +V + DL G+D R++R
Sbjct: 34 PDAFTVQATRTGIPVVWVKREQLLDVVAFLKKQPK-PYVMLFDLHGMDERLRTHREGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V YH +S + NR + +K+A+ VP++ ++P A+W+ERE W+M+GI F GHP
Sbjct: 93 ADYSVFYHIISIERNRDIMLKVALAESDLHVPTVTKLFPNANWYERETWEMFGITFNGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ +EGHPLRKD+P
Sbjct: 153 HLTRIMMPQTWEGHPLRKDYP 173
>gi|227112325|ref|ZP_03825981.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 599
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + +FL+ P +V + DL G+D R++R
Sbjct: 34 PDAFTVQATRTGIPVVWVKREQLLDVVAFLKKQPK-PYVMLFDLHGMDERLRTHREGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V YH +S + NR + +K+A+ VP++ ++P A+W+ERE W+M+GI F GHP
Sbjct: 93 ADYSVFYHIISIERNRDIMLKVALAESDLHVPTVTKLFPNANWYERETWEMFGITFNGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ +EGHPLRKD+P
Sbjct: 153 HLTRIMMPQTWEGHPLRKDYP 173
>gi|22125527|ref|NP_668950.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pestis KIM 10]
gi|45442153|ref|NP_993692.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pestis biovar Microtus str. 91001]
gi|51596904|ref|YP_071095.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pseudotuberculosis IP 32953]
gi|108808040|ref|YP_651956.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pestis Antiqua]
gi|108812310|ref|YP_648077.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pestis Nepal516]
gi|145599243|ref|YP_001163319.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pestis Pestoides F]
gi|149365541|ref|ZP_01887576.1| NADH dehydrogenase I chain C/D [Yersinia pestis CA88-4125]
gi|153949467|ref|YP_001400435.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pseudotuberculosis IP 31758]
gi|165925594|ref|ZP_02221426.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937704|ref|ZP_02226266.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008272|ref|ZP_02229170.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213850|ref|ZP_02239885.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399692|ref|ZP_02305216.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167422320|ref|ZP_02314073.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424577|ref|ZP_02316330.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|170023803|ref|YP_001720308.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pseudotuberculosis YPIII]
gi|186895985|ref|YP_001873097.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pseudotuberculosis PB1/+]
gi|218929639|ref|YP_002347514.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
pestis CO92]
gi|229895294|ref|ZP_04510468.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis
Pestoides A]
gi|229898655|ref|ZP_04513800.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902654|ref|ZP_04517771.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis
Nepal516]
gi|270490164|ref|ZP_06207238.1| NADH dehydrogenase subunit D [Yersinia pestis KIM D27]
gi|294504367|ref|YP_003568429.1| NADH dehydrogenase I chain C/D [Yersinia pestis Z176003]
gi|81639044|sp|Q669A2|NUOCD_YERPS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|123073346|sp|Q1CHQ3|NUOCD_YERPN RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|123372335|sp|Q1C6B1|NUOCD_YERPA RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|123777025|sp|Q7CJ92|NUOCD_YERPE RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534240|sp|A7FGQ7|NUOCD_YERP3 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534241|sp|B2K819|NUOCD_YERPB RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534247|sp|A4TM34|NUOCD_YERPP RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534346|sp|B1JGL5|NUOCD_YERPY RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|21958426|gb|AAM85201.1|AE013766_4 NADH dehydrogenase I chain C, D [Yersinia pestis KIM 10]
gi|45437017|gb|AAS62569.1| NADH dehydrogenase I chain C/D [Yersinia pestis biovar Microtus
str. 91001]
gi|51590186|emb|CAH21823.1| NADH dehydrogenase I chain C/D [Yersinia pseudotuberculosis IP
32953]
gi|108775958|gb|ABG18477.1| NADH dehydrogenase I chain C/D [Yersinia pestis Nepal516]
gi|108779953|gb|ABG14011.1| NADH dehydrogenase I chain C/D [Yersinia pestis Antiqua]
gi|115348250|emb|CAL21178.1| NADH dehydrogenase I chain C/D [Yersinia pestis CO92]
gi|145210939|gb|ABP40346.1| NADH dehydrogenase I chain C/D [Yersinia pestis Pestoides F]
gi|149291954|gb|EDM42028.1| NADH dehydrogenase I chain C/D [Yersinia pestis CA88-4125]
gi|152960962|gb|ABS48423.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia
pseudotuberculosis IP 31758]
gi|165914454|gb|EDR33069.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922703|gb|EDR39854.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992654|gb|EDR44955.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205024|gb|EDR49504.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166958826|gb|EDR55847.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167052196|gb|EDR63604.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167056459|gb|EDR66228.1| NADH-quinone oxidoreductase, C/D subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169750337|gb|ACA67855.1| NADH dehydrogenase I, D subunit [Yersinia pseudotuberculosis YPIII]
gi|186699011|gb|ACC89640.1| NADH dehydrogenase I, D subunit [Yersinia pseudotuberculosis PB1/+]
gi|229680101|gb|EEO76200.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis
Nepal516]
gi|229688203|gb|EEO80274.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis biovar
Orientalis str. India 195]
gi|229701780|gb|EEO89805.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis
Pestoides A]
gi|262362644|gb|ACY59365.1| NADH dehydrogenase I chain C/D [Yersinia pestis D106004]
gi|270338668|gb|EFA49445.1| NADH dehydrogenase subunit D [Yersinia pestis KIM D27]
gi|294354826|gb|ADE65167.1| NADH dehydrogenase I chain C/D [Yersinia pestis Z176003]
gi|320014609|gb|ADV98180.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 598
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPDADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|296439683|sp|P86217|NDUS3_MESAU RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
3, mitochondrial; AltName: Full=Complex I-30kD;
Short=CI-30kD; AltName: Full=NADH-ubiquinone
oxidoreductase 30 kDa subunit
Length = 94
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/76 (60%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELM 173
REVWDM+G+FF HPDL RILTDYGFEGHP RK YDD+VK+VV PVEL
Sbjct: 28 REVWDMFGVFFFNHPDL-RILTDYGFEGHPFRK-----------YDDEVKRVVAEPVELA 75
Query: 174 QEHRDYDFLSPWEGVN 189
QE R +D SPWE
Sbjct: 76 QEFRKFDLNSPWEAFP 91
>gi|325280125|ref|YP_004252667.1| NAD(P)H-quinone oxidoreductase subunit H [Odoribacter splanchnicus
DSM 20712]
gi|324311934|gb|ADY32487.1| NAD(P)H-quinone oxidoreductase subunit H [Odoribacter splanchnicus
DSM 20712]
Length = 540
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ I++ ++ G + V L LR+D F ++ + G+D+
Sbjct: 2 KEKILSIVPEAIL--EEKHGIWFVSVPRTSFHDLALRLRNDEDTSFDFLVCMTGMDW--- 56
Query: 69 SNRFDVVYHFLSPKYNRRL--RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
V+YH S KY L RV+ E +PS+ I+ A+ EREV+D YGI F
Sbjct: 57 GETLGVMYHLRSSKYGHDLALRVETENRENPELPSVSDIWATANLNEREVFDFYGIRFIN 116
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
HPD+RR+ + G+PLRKD YD K P+ L E
Sbjct: 117 HPDMRRLFLRNDWIGYPLRKD----------YDADEK---INPIRLESE 152
>gi|297517327|ref|ZP_06935713.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Escherichia coli OP50]
Length = 512
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|332162387|ref|YP_004298964.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318606466|emb|CBY27964.1| NADH-ubiquinone oxidoreductase chain C; NADH-ubiquinone
oxidoreductase chain D [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325666617|gb|ADZ43261.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330860334|emb|CBX70647.1| NADH-quinone oxidoreductase subunit C/D [Yersinia enterocolitica
W22703]
Length = 598
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPDADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|229838095|ref|ZP_04458254.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229694461|gb|EEO84508.1| NADH:ubiquinone oxidoreductase, chain C,D [Yersinia pestis biovar
Orientalis str. PEXU2]
Length = 598
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPDADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|320178741|gb|EFW53704.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shigella
boydii ATCC 9905]
Length = 600
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATLTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ ++GHPLRKD+P
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYP 174
>gi|229076511|ref|ZP_04209473.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock4-18]
gi|228706697|gb|EEL58908.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock4-18]
Length = 221
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I GS + + + +L VD + LR F + +L
Sbjct: 69 LNQYVEVIRGKLGGSTLVDSYINKLSKDVPTLVVDPSKYYEVMELLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREVPQVESVTALWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 186 LGIAFKGHPNLSRILMPDDWVGYPLRKDY 214
>gi|206976949|ref|ZP_03237851.1| NADH dehydrogenase subunit c [Bacillus cereus H3081.97]
gi|206744915|gb|EDZ56320.1| NADH dehydrogenase subunit c [Bacillus cereus H3081.97]
Length = 419
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + +L V+ + + LR F + +L
Sbjct: 267 LNQYVEVIKGKVGEGALVDCYINKLSKDVPTLVVEPSEYYEVMELLRSHEELAFDYMSEL 326
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 327 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 383
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 384 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 412
>gi|255535797|ref|YP_003096168.1| NADH-ubiquinone oxidoreductase chain C [Flavobacteriaceae bacterium
3519-10]
gi|255341993|gb|ACU08106.1| NADH-ubiquinone oxidoreductase chain C [Flavobacteriaceae bacterium
3519-10]
Length = 164
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL-SR 68
+ I F SV L+L++ D+ + +LRD + D+CG+ +
Sbjct: 8 EAITREFPDSVISHSEPYDFLTLEIKKEDIKKVIHYLRD-SSLEINFLTDICGIHYPSDP 66
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
V+YH + N R+R+K + V ++ +Y GA+W ERE ++ YG+ F+GH
Sbjct: 67 EKELGVIYHLHNMMTNFRIRLKCFMPRENAEVDTMTDLYAGANWMERETFEFYGVKFKGH 126
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
PDLR IL HPL K++ + D K
Sbjct: 127 PDLRVILNMEDIGYHPLLKEYRLEDGT--RTDKDDK 160
>gi|238759964|ref|ZP_04621117.1| NADH-quinone oxidoreductase subunit C/D [Yersinia aldovae ATCC
35236]
gi|238701791|gb|EEP94355.1| NADH-quinone oxidoreductase subunit C/D [Yersinia aldovae ATCC
35236]
Length = 598
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPDADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|291618187|ref|YP_003520929.1| NuoC [Pantoea ananatis LMG 20103]
gi|291153217|gb|ADD77801.1| NuoC [Pantoea ananatis LMG 20103]
gi|327394580|dbj|BAK12002.1| NADH-quinone oxidoreductase chain C/D NuoC [Pantoea ananatis
AJ13355]
Length = 599
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEIITFLRKLPK-PYVMLYDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A++E VP+I I+ A+W+ERE W+M+GI
Sbjct: 87 RAGLPAADFSVFYHLLSIERNRDIMLKVALSENDMHVPTITNIFANANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|290475915|ref|YP_003468810.1| NADH dehydrogenase I subunit C, D [Xenorhabdus bovienii SS-2004]
gi|289175243|emb|CBJ82046.1| NADH dehydrogenase I chain C, D [Xenorhabdus bovienii SS-2004]
Length = 598
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ F + G + V L+++ +FL+ P +V + DL GVD RS+
Sbjct: 28 LNRQFGPEAFSVQPTRTGMPVVWVRREQLLAVITFLKKLPK-PYVMLFDLHGVDERQRSH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A+ E ++P+I IY A+W+ERE W+M+GI
Sbjct: 87 RQGLPAADFSVFYHLISIERNRDIMLKVALNEKDLNIPTITSIYSNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F GHP+LRRIL +EGHPLRK++
Sbjct: 147 TFNGHPNLRRILMPDTWEGHPLRKEY 172
>gi|229105890|ref|ZP_04236516.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-28]
gi|228677549|gb|EEL31800.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-28]
Length = 221
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I GS + + + +L VD + LR F + +L
Sbjct: 69 LNQYVEVIRGKLGGSTLVDSYINKLSKDVPTLVVDPSKYYEVMELLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREVPQVESVTALWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 186 LGIAFKGHPNLSRILMPDDWVGYPLRKDY 214
>gi|225867275|ref|YP_002752653.1| NADH dehydrogenase subunit c [Bacillus cereus 03BB102]
gi|225789769|gb|ACO29986.1| NADH dehydrogenase subunit c [Bacillus cereus 03BB102]
Length = 351
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 1 MVRK-IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M + + I ++ + +L V+ + LR F
Sbjct: 194 MNEPYLNQYVEVIKGKVGEDALVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFD 253
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFER 114
+ +L DF++ V H S + + VK+ + V S+ ++ GADW ER
Sbjct: 254 YMSELHATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPER 310
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
E +D+ GI F+GHP+L RIL + GHPLRKD+
Sbjct: 311 EAYDLLGIVFKGHPNLSRILMPDDWVGHPLRKDY 344
>gi|148653494|ref|YP_001280587.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Psychrobacter sp. PRwf-1]
gi|218528057|sp|A5WG46|NUOCD_PSYWF RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|148572578|gb|ABQ94637.1| NADH dehydrogenase I, D subunit [Psychrobacter sp. PRwf-1]
Length = 595
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR--- 71
F+G G ++ V DL+ + +LR P +V ++DL +D R +R
Sbjct: 29 KFAGKFTEQFTFDGIPTIWVSRQDLLDVLMYLRTLPK-PYVMLLDLSAMDERLRQHRDGL 87
Query: 72 ----FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEG 126
F V YH +S + N +RVK+A++E VP+ I+P A+W+EREVWDM+GI F+G
Sbjct: 88 PASDFTVFYHLMSLERNSDIRVKVALSEDDLKVPTATKIWPNANWYEREVWDMFGIVFDG 147
Query: 127 HPDLRRILTDYGFEGHPLRKDF 148
HP L RIL +EGHPLRK++
Sbjct: 148 HPHLTRILLPKYWEGHPLRKEY 169
>gi|397900|emb|CAA48362.1| NADH dehydrogenase I, subunit nuoC [Escherichia coli]
Length = 183
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 10/151 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + + L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+AE VP+ ++P A+W+ERE WD++GI
Sbjct: 88 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
F+GHP+LRRI+ ++GHPLRKD+P +
Sbjct: 148 TFDGHPNLRRIMMPQTWKGHPLRKDYPRARY 178
>gi|295098075|emb|CBK87165.1| NADH dehydrogenase subunit C /NADH dehydrogenase subunit D
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 600
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVVDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S N + +K+A++E +P+I ++P A+W+ERE W+M+G+
Sbjct: 88 RQGLPAADFSVFYHLISIDRNTDIMLKVALSENDMHLPTITKLFPNANWYERETWEMFGM 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ + GHPLRKD+P
Sbjct: 148 TFDGHPHLTRIMMPQTWTGHPLRKDYP 174
>gi|261340674|ref|ZP_05968532.1| NADH-quinone oxidoreductase, C/D subunit [Enterobacter cancerogenus
ATCC 35316]
gi|288317088|gb|EFC56026.1| NADH-quinone oxidoreductase, C/D subunit [Enterobacter cancerogenus
ATCC 35316]
Length = 600
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVVDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S N + +K+A++E +P+I ++P A+W+ERE W+M+G+
Sbjct: 88 RQGLPAADFSVFYHLISIDRNTDIMLKVALSENDMHLPTITKLFPNANWYERETWEMFGM 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ + GHPLRKD+P
Sbjct: 148 TFDGHPHLTRIMMPQTWTGHPLRKDYP 174
>gi|167463143|ref|ZP_02328232.1| NADH dehydrogenase subunit C [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383096|ref|ZP_08056923.1| hypothetical protein PL1_1945 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152758|gb|EFX45384.1| hypothetical protein PL1_1945 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 249
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 8 LGDYIVNSFSGSVRFAVNSV---GEL-----SLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
L D +V + V V EL + + + + +
Sbjct: 96 LLDRMVQILTDRVHEEVIQEAYINELNGHLPCVVIHPEHWYQAAEEIHAHEEFACNYLSN 155
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
L G+D + ++VYH S R VK+ + + I+P A+W EREV+D
Sbjct: 156 LTGIDQ---KSHLEMVYHLRSIPSGREYMVKVKTDRDRPSIPSVTPIWPTANWNEREVYD 212
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ G+ F GHPDLRRI+ + GHPLRKD+
Sbjct: 213 LLGVDFPGHPDLRRIMMPDDWVGHPLRKDY 242
>gi|229187523|ref|ZP_04314664.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus BGSC
6E1]
gi|228595962|gb|EEK53641.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus BGSC
6E1]
Length = 158
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 1 MVRK-IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M + + I ++ + +L V+ + LR F
Sbjct: 1 MNEPYLNQYVEVIKGKVGEDALVDFYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFD 60
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFER 114
+ +L DF++ V H S + + VK+ + V S+ ++ GADW ER
Sbjct: 61 YMSELHATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPER 117
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
E +D+ GI F+GHP+L RIL + GHPLRKD+
Sbjct: 118 EAYDLLGIVFKGHPNLSRILMPDDWVGHPLRKDY 151
>gi|226355361|ref|YP_002785101.1| NADH dehydrogenase (quinone) subunit C [Deinococcus deserti VCD115]
gi|226317351|gb|ACO45347.1| putative NADH dehydrogenase (quinone), subunit C (NADH-quinone
oxidoreductase, subunit C) [Deinococcus deserti VCD115]
Length = 213
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN----RFDVVYHF 78
E + V DL + L+D +ID G+D+L RF V+++
Sbjct: 31 TEEHAAEPTAVVPAADLRQVAQALKD----RGFMLIDTVGIDYLKYPEARPARFCVLHNV 86
Query: 79 LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
P +RR+ +++ + +G+ + S+ ++ A++ EREV+D+ G+ F GHPDLR++LT
Sbjct: 87 YHPYDHRRVFLRVWLDDGQPLDSLYPVWRAANYLEREVYDLVGVEFTGHPDLRKVLTPDD 146
Query: 139 FEGHPLRKDFPV 150
EG+PLRKDFP+
Sbjct: 147 LEGNPLRKDFPL 158
>gi|329296021|ref|ZP_08253357.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Plautia
stali symbiont]
Length = 599
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G D R++
Sbjct: 28 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEIIEFLRKLPK-PYVMLYDLHGFDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A++E I I+ A+W+ERE W+M+GI
Sbjct: 87 RAGLPAADFSVFYHLLSIERNRDIMLKVALSENDLNVPTITKIFANANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFNGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|300114495|ref|YP_003761070.1| NADH dehydrogenase I subunit D [Nitrosococcus watsonii C-113]
gi|299540432|gb|ADJ28749.1| NADH dehydrogenase I, D subunit [Nitrosococcus watsonii C-113]
Length = 592
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ +G+ + F + G + + + + +L+ + + + DL +
Sbjct: 14 LTPIGEVLYRQFGETNFIRQETHDGIPTFWITKAQIPKILRYLKSELASPYAMLYDLTAI 73
Query: 64 DFL-------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFERE 115
D ++ F +VYH LS N LR+K+ + I I+P A+W+ERE
Sbjct: 74 DERVRTHRPGQPASDFTLVYHLLSFTRNEDLRLKVPLWGESPSVPTITPIWPAANWYERE 133
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+WD++GI FEGHP LRRIL ++GHPLRKD
Sbjct: 134 IWDLFGINFEGHPQLRRILLPPTWQGHPLRKDH 166
>gi|293395172|ref|ZP_06639458.1| NADH dehydrogenase I subunit D [Serratia odorifera DSM 4582]
gi|291422349|gb|EFE95592.1| NADH dehydrogenase I subunit D [Serratia odorifera DSM 4582]
Length = 598
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL GVD R++
Sbjct: 27 LRNRFGPEAFTVQPTRTGMPVVWVKAEQLLEVMTFLRKQPK-PYVMLFDLHGVDERLRTH 85
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A+ + VP+ ++P A+W+ERE W+M+GI
Sbjct: 86 RQGLPAADFSVFYHLISIERNRDIMLKVALSEKDLHVPTATKVFPNANWYERETWEMFGI 145
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 146 TFDGHPHLSRIMMPQTWEGHPLRKDYP 172
>gi|217962787|ref|YP_002341363.1| NADH dehydrogenase subunit C [Bacillus cereus AH187]
gi|217066493|gb|ACJ80743.1| NADH dehydrogenase subunit c [Bacillus cereus AH187]
Length = 421
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + +L V+ + + LR F + +L
Sbjct: 269 LNQYVEVIKGKVGEGALVDCYINKLSKDVPTLVVEPSEYYEVMELLRSHEELAFDYMSEL 328
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 329 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 385
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 386 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 414
>gi|229118794|ref|ZP_04248144.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus Rock1-3]
gi|228664664|gb|EEL20156.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus Rock1-3]
Length = 335
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I GS + + + +L VD + LR F + +L
Sbjct: 183 LNQYVEVIRGKLGGSTLVDSYINKLSKDVPTLVVDPSKYYEVMELLRFHEGLAFDYMSEL 242
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 243 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREVPQVESVTALWKGADWPEREAYDL 299
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 300 LGIAFKGHPNLSRILMPDDWVGYPLRKDY 328
>gi|90425544|ref|YP_533914.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodopseudomonas palustris BisB18]
gi|122475342|sp|Q20Z41|NUOCD_RHOPB RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|90107558|gb|ABD89595.1| NADH dehydrogenase I, D subunit [Rhodopseudomonas palustris BisB18]
Length = 581
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+L + + F +V + +L + + +L +L+ + F ++DL +D
Sbjct: 5 ELVNELSARFGEAVFGEQPTHDAFPTLWIKPEAMPALHRYLKHEIERPFPLLVDLWAIDE 64
Query: 66 -------LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVW 117
+ + H +S + N +R+K A+ +I IYP ADW+ERE +
Sbjct: 65 TARHHREGQPPSGVTIASHLMSLERNADIRLKCALPADDPRAHTIAEIYPNADWYEREAF 124
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF-------VELHYDDKVKKVVYRP 169
DM+G+ FEG D RRIL ++GHP+RKD P +D + + + P
Sbjct: 125 DMFGVHFEGRRDHRRILMPPLWDGHPMRKDQPARATERPPFVMTAARFDAEEQALAVDP 183
>gi|206578814|ref|YP_002237326.1| NADH-quinone oxidoreductase, C/D subunit [Klebsiella pneumoniae
342]
gi|288934256|ref|YP_003438315.1| NADH dehydrogenase I, D subunit [Klebsiella variicola At-22]
gi|290508459|ref|ZP_06547830.1| nuoC; NADH-quinone oxidoreductase, C/D subunit [Klebsiella sp.
1_1_55]
gi|226737320|sp|B5XNV6|NUOCD_KLEP3 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|206567872|gb|ACI09648.1| NADH-quinone oxidoreductase, C/D subunit [Klebsiella pneumoniae
342]
gi|288888985|gb|ADC57303.1| NADH dehydrogenase I, D subunit [Klebsiella variicola At-22]
gi|289777853|gb|EFD85850.1| nuoC; NADH-quinone oxidoreductase, C/D subunit [Klebsiella sp.
1_1_55]
Length = 602
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 31 LRNRFGPDAFTVQPTRTGVPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 89
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A++E +P+ ++P A+W+ERE W+M+G+
Sbjct: 90 RDGLPAADFSVFYHLISIDRNRDIMLKVALSENDLHLPTFTKLFPNANWYERETWEMFGM 149
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP+LRRI+ +EGHPLRKD+P
Sbjct: 150 TFDGHPNLRRIMMPPTWEGHPLRKDYP 176
>gi|146307437|ref|YP_001187902.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Pseudomonas mendocina ymp]
gi|218528053|sp|A4XV04|NUOCD_PSEMY RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|145575638|gb|ABP85170.1| NADH dehydrogenase subunit D / NADH dehydrogenase subunit C
[Pseudomonas mendocina ymp]
Length = 593
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 6 EDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D+ + G L V L+ + LR P +V + DL GVD
Sbjct: 17 QDVIAELRARLGDDGFTLQATRTGMPVLWVSRERLLEVLKCLRHLPR-PYVMLYDLHGVD 75
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREV 116
R+ R F V YH +S + N L VK+A++E GI+P A+W+EREV
Sbjct: 76 ERLRTQRRGLPDADFTVFYHLMSLERNSDLMVKVALSERDLNLPTATGIWPNANWYEREV 135
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
WD+YGI F+GHP L RI+ +EGHPLRKD+P
Sbjct: 136 WDLYGITFQGHPHLTRIMMPPTWEGHPLRKDYP 168
>gi|260551031|ref|ZP_05825236.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter sp. RUH2624]
gi|260405979|gb|EEW99466.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter sp. RUH2624]
Length = 595
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 8 LGDYIVNSFSG--SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F V+ ++ V+ + + FLR +V + DL +D
Sbjct: 22 IVEELKTKFGENFYVQATFEEF--PTVWVERARVQEVLMFLRKVER-PYVMLFDLSAMDE 78
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVW 117
R +R F V YH LS + N +R+K+A+ E I+P A+W+ERE +
Sbjct: 79 RLRQHRDGLPASDFTVFYHLLSLERNSDIRIKVALNENDLSLPTATNIWPNANWYEREAY 138
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DM+GI FEGHP LRRIL +EGHPLRK++ Y K + QEH
Sbjct: 139 DMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDKAKQDFE-----QEHL 193
Query: 178 DY 179
+
Sbjct: 194 RF 195
>gi|162286749|ref|YP_001083796.2| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii ATCC 17978]
gi|169634179|ref|YP_001707915.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii SDF]
gi|169797056|ref|YP_001714849.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii AYE]
gi|184157031|ref|YP_001845370.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii ACICU]
gi|213156538|ref|YP_002318199.1| NADH dehydrogenase I chain CD [Acinetobacter baumannii AB0057]
gi|215484517|ref|YP_002326752.1| NADH-quinone oxidoreductase subunit C/D [Acinetobacter baumannii
AB307-0294]
gi|239501292|ref|ZP_04660602.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii AB900]
gi|260555652|ref|ZP_05827872.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter baumannii
ATCC 19606]
gi|301347792|ref|ZP_07228533.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii AB056]
gi|301510627|ref|ZP_07235864.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii AB058]
gi|301595912|ref|ZP_07240920.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii AB059]
gi|332852145|ref|ZP_08433972.1| NADH dehydrogenase subunit D [Acinetobacter baumannii 6013150]
gi|332867544|ref|ZP_08437697.1| NADH dehydrogenase subunit D [Acinetobacter baumannii 6013113]
gi|332872606|ref|ZP_08440574.1| NADH dehydrogenase subunit D [Acinetobacter baumannii 6014059]
gi|218528028|sp|B2HU43|NUOCD_ACIBC RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528029|sp|B0VU54|NUOCD_ACIBS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528030|sp|B0V899|NUOCD_ACIBY RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218528062|sp|A3M2Q0|NUOCD_ACIBT RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737311|sp|B7GZB9|NUOCD_ACIB3 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|226737312|sp|B7I741|NUOCD_ACIB5 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|169149983|emb|CAM87877.1| NADH dehydrogenase I chain C,D [Acinetobacter baumannii AYE]
gi|169152971|emb|CAP02017.1| NADH dehydrogenase I chain C,D [Acinetobacter baumannii]
gi|183208625|gb|ACC56023.1| NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Acinetobacter
baumannii ACICU]
gi|193076536|gb|ABO11194.2| NADH dehydrogenase I chain CD [Acinetobacter baumannii ATCC 17978]
gi|213055698|gb|ACJ40600.1| NADH dehydrogenase I chain CD [Acinetobacter baumannii AB0057]
gi|213987654|gb|ACJ57953.1| NADH-quinone oxidoreductase subunit C/D [Acinetobacter baumannii
AB307-0294]
gi|260410563|gb|EEX03861.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter baumannii
ATCC 19606]
gi|322506930|gb|ADX02384.1| nuoCD [Acinetobacter baumannii 1656-2]
gi|323516797|gb|ADX91178.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter baumannii TCDC-AB0715]
gi|332729517|gb|EGJ60856.1| NADH dehydrogenase subunit D [Acinetobacter baumannii 6013150]
gi|332733961|gb|EGJ65106.1| NADH dehydrogenase subunit D [Acinetobacter baumannii 6013113]
gi|332739135|gb|EGJ69994.1| NADH dehydrogenase subunit D [Acinetobacter baumannii 6014059]
Length = 595
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 8 LGDYIVNSFSG--SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F V+ ++ V+ + + FLR +V + DL +D
Sbjct: 22 IVEELKTKFGENFYVQATFEEF--PTVWVERARVQEVLMFLRKVER-PYVMLFDLSAMDE 78
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVW 117
R +R F V YH LS + N +R+K+A+ E I+P A+W+ERE +
Sbjct: 79 RLRQHRDGLPASDFTVFYHLLSLERNSDIRIKVALNENDLNLPTATNIWPNANWYEREAY 138
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DM+GI FEGHP LRRIL +EGHPLRK++ Y K + QEH
Sbjct: 139 DMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDKAKQDFE-----QEHL 193
Query: 178 DY 179
+
Sbjct: 194 RF 195
>gi|298373134|ref|ZP_06983124.1| NADH dehydrogenase I, D subunit [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276038|gb|EFI17589.1| NADH dehydrogenase I, D subunit [Bacteroidetes oral taxon 274 str.
F0058]
Length = 543
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 10/173 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+E + + N+ N ++ V +L LR++ F + D+
Sbjct: 1 MFNKLEQVFSQLANA------EISNKDNVYTIVVAKENLRQAAETLRNNDIVRFDFLRDI 54
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
G+D+ + L + E + ++ ++ A ++EREV D +
Sbjct: 55 IGMDYTDSLGVIYNLSPSEDLSVIVLLESRTDDRENPAFDTVEDLWLSAPFYEREVHDFF 114
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDF---PVTGFVELHYDDKVKKVVYRPV 170
GI F G+PD+RRI + G+PLRKD+ P+ + L ++ + + Y PV
Sbjct: 115 GIRFLGNPDMRRIFLRQDWRGYPLRKDYDSSPIINPIPLE-NEDLDSLEYLPV 166
>gi|89895332|ref|YP_518819.1| NADH dehydrogenase I chain C [Desulfitobacterium hafniense Y51]
gi|89334780|dbj|BAE84375.1| NADH dehydrogenase I chain C [Desulfitobacterium hafniense Y51]
Length = 153
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + + SG+V + L L V + + ++ + D+ GVD L
Sbjct: 2 DELASRVSGTVEEI---LDTLVLTVKAPYITETLTAVKSFGEVPCDFLHDIGGVDKLDH- 57
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHP 128
F VVY S + ++LRVK V V + I+ GAD+ ERE +DM+GI F+GHP
Sbjct: 58 --FQVVYQLTSLRGPQKLRVKAIVDRDNPVIDSVTRIWAGADFMEREAYDMFGIQFKGHP 115
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+L+RI FEG PLRKD+ VT E+
Sbjct: 116 NLKRIYMWDDFEGFPLRKDY-VTEPAEVR 143
>gi|238798406|ref|ZP_04641887.1| NADH-quinone oxidoreductase subunit C/D [Yersinia mollaretii ATCC
43969]
gi|238717720|gb|EEQ09555.1| NADH-quinone oxidoreductase subunit C/D [Yersinia mollaretii ATCC
43969]
Length = 598
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEIMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A+ + VP+ I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPEADFSVFYHLLSIERNRDIMLKVALSEKDLHVPTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|315453250|ref|YP_004073520.1| NADH-quinone oxidoreductase [Helicobacter felis ATCC 49179]
gi|315132302|emb|CBY82930.1| NADH-quinone oxidoreductase [Helicobacter felis ATCC 49179]
Length = 265
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
V + + ++ ++ + L+ + + + ++ +DFL + F++ Y F
Sbjct: 49 KVLESFIEIDTAVFVIEVSEVAQVAERLK---NLGYETLSEMSAIDFLEKRGEFELFYQF 105
Query: 79 LSP----KYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
LS RRLR+K + + ++ P++ +Y A W ERE +DM+GI FE HP L+RIL
Sbjct: 106 LSYLPGYANKRRLRLKAVLKKEENPPTLSHLYRSALWSEREAYDMFGIVFENHPHLKRIL 165
Query: 135 TDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ GHPL K +P+ G + + K
Sbjct: 166 MPDDWVGHPLLKSYPLKGDEHAAWYEVDK 194
>gi|229099731|ref|ZP_04230657.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-29]
gi|228683701|gb|EEL37653.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-29]
Length = 369
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I GS + + + +L VD + LR F + +L
Sbjct: 217 LNQYVEVIRGKLGGSTLVDSYINKLSKDVPTLVVDPSKYYEVMELLRFHEGLAFDYMSEL 276
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + + V S+ ++ GADW ERE +D+
Sbjct: 277 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREEPQVESVTALWKGADWPEREAYDL 333
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 334 LGIAFKGHPNLSRILMPDDWVGYPLRKDY 362
>gi|195953132|ref|YP_002121422.1| NADH-ubiquinone oxidoreductase chain 49kDa [Hydrogenobaculum sp.
Y04AAS1]
gi|218528049|sp|B4U8I3|NUOCD_HYDS0 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|195932744|gb|ACG57444.1| NADH-ubiquinone oxidoreductase chain 49kDa [Hydrogenobaculum sp.
Y04AAS1]
Length = 571
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 10/178 (5%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGEL--SLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
++ E + I + +L + V L++ +++D F +D
Sbjct: 1 MQASEKTLNEIKAKLP----YVEVKKDKLLSIVYVQKELLINTLKAIKED--FGFKLFLD 54
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
VD L NRF+ Y + R+ VK S ++ A W ERE +DM
Sbjct: 55 HSVVDTLEAQNRFEAFYILYNVDTKERIAVKTRTEHSLP--SAEKLWFAAKWAERECYDM 112
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
+GI +EGH L R + HPLRKDFP+ G+ + + V + +R
Sbjct: 113 FGINYEGHEHLVRAFMWDTYNYHPLRKDFPLQGYETVELPSLNETVFGDNLSNTMNYR 170
>gi|289548983|ref|YP_003473971.1| NADH-ubiquinone oxidoreductase chain 49kDa [Thermocrinis albus DSM
14484]
gi|289182600|gb|ADC89844.1| NADH-ubiquinone oxidoreductase chain 49kDa [Thermocrinis albus DSM
14484]
Length = 572
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+ V L+ L L+++ + ID VDF RS RF Y + +R+ VK
Sbjct: 29 EIWVPSSQLLDLLKTLKEEK--GYKLFIDHSVVDFPDRSPRFMAFYILYNVHDRKRVVVK 86
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
+PSI ++ W ERE +DM+GI +EGH +L R + HPLRKDFP+
Sbjct: 87 TWT--DGVLPSIEKLWFAGKWAERECYDMFGIKYEGHENLVRAFMWETYPYHPLRKDFPL 144
Query: 151 TGF 153
G+
Sbjct: 145 EGY 147
>gi|296103967|ref|YP_003614113.1| NADH:ubiquinone oxidoreductase, chain C,D [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295058426|gb|ADF63164.1| NADH:ubiquinone oxidoreductase, chain C,D [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 600
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVVDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S N + +K+A++E +P++ ++P A+W+ERE W+M+G+
Sbjct: 88 RQGLPAADFSVFYHLISIDRNTDIMLKVALSENDMHLPTLTKLFPNANWYERETWEMFGM 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ + GHPLRKD+P
Sbjct: 148 TFDGHPHLTRIMMPQTWTGHPLRKDYP 174
>gi|148260122|ref|YP_001234249.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acidiphilium cryptum JF-5]
gi|218528031|sp|A5FXJ8|NUOCD_ACICJ RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|146401803|gb|ABQ30330.1| NADH dehydrogenase subunit C / NADH dehydrogenase subunit D
[Acidiphilium cryptum JF-5]
Length = 592
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-------RSNRFDVVYHFLSPKY 83
++ +D + ++ LRD F + DL +D + F +VYH +S +
Sbjct: 41 TIWIDRDIVHAVLRHLRDGATRRFQMLYDLTAIDERQRVHRDGLPKSDFTLVYHLVSFER 100
Query: 84 NRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N +RVK+ +AEG V SI I+P A+W+EREVWDM+GI F GHP L RILT + GH
Sbjct: 101 NDDVRVKVPLAEGALEVQSIADIWPNANWYEREVWDMFGIGFAGHPTLFRILTPPTWTGH 160
Query: 143 PLRKDFPVTGFVEL 156
PLRKD+ + E+
Sbjct: 161 PLRKDY-IARATEM 173
>gi|326402925|ref|YP_004283006.1| NADH-quinone oxidoreductase subunit C/D [Acidiphilium multivorum
AIU301]
gi|325049786|dbj|BAJ80124.1| NADH-quinone oxidoreductase subunit C/D [Acidiphilium multivorum
AIU301]
Length = 592
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-------RSNRFDVVYHFLSPKY 83
++ +D + ++ LRD F + DL +D + F +VYH +S +
Sbjct: 41 TIWIDRDIVHAVLRHLRDGATRRFQMLYDLTAIDERQRVHRDGLPKSDFTLVYHLVSFER 100
Query: 84 NRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N +R+K+ +AEG V SI I+P A+W+EREVWDM+GI F GHP L RILT + GH
Sbjct: 101 NDDVRIKVPLAEGALEVQSIADIWPNANWYEREVWDMFGIGFAGHPTLFRILTPPTWTGH 160
Query: 143 PLRKDFPVTGFVEL 156
PLRKD+ + E+
Sbjct: 161 PLRKDY-IARATEM 173
>gi|293609137|ref|ZP_06691440.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829710|gb|EFF88072.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121083|gb|ADY80606.1| NADH dehydrogenase I chain C,D [Acinetobacter calcoaceticus PHEA-2]
Length = 595
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 8 LGDYIVNSFSG--SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F V+ ++ V+ + + FLR +V + DL +D
Sbjct: 22 IVEELKTKFGENFYVQATFEEF--PTVWVERARVQEVLMFLRKVER-PYVMLFDLSAMDE 78
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVW 117
R +R F V YH LS + N +R+K+A+ E I+P A+W+ERE +
Sbjct: 79 RLRVHRDGLPASDFTVFYHLLSLERNSDIRIKVALNENDLNIPTATNIWPNANWYEREAY 138
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DM+GI FEGHP LRRIL +EGHPLRK++ Y K + QEH
Sbjct: 139 DMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDKAKQDFE-----QEHL 193
Query: 178 DY 179
+
Sbjct: 194 RF 195
>gi|326572774|gb|EGE22760.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis BC7]
Length = 582
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG------- 62
+ + + + + + G ++ V C +L+ + FLR P FV ++DL
Sbjct: 13 EELTANNHTYITQST-ADGIPTIWVACDELLDVLLFLRTLPK-PFVMLVDLSAIDERLRQ 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM+G+
Sbjct: 71 YRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDMFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F+GHP L RIL +EGHPLRK++
Sbjct: 131 VFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|296112933|ref|YP_003626871.1| NADH-quinone oxidoreductase subunit C/D [Moraxella catarrhalis RH4]
gi|295920626|gb|ADG60977.1| NADH-quinone oxidoreductase subunit C/D [Moraxella catarrhalis RH4]
Length = 582
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 9/146 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG------- 62
+ + + + + + G ++ V C +L+ + FLR P F ++DL
Sbjct: 13 EELTANNHTYITQST-ADGIPTIWVACDELLDVLLFLRTLPK-PFAMLVDLSAIDERLRQ 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM+G+
Sbjct: 71 YRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDMFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F+GHP L RIL +EGHPLRK++
Sbjct: 131 VFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|326561155|gb|EGE11520.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis 7169]
Length = 582
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG------- 62
+ + + + + + G ++ V C +L+ + FLR P FV ++DL
Sbjct: 13 EELTANNHTYITQST-ADGIPTIWVACDELLDVLLFLRTLPK-PFVMLVDLSAIDERLRQ 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM+G+
Sbjct: 71 YRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDMFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F+GHP L RIL +EGHPLRK++
Sbjct: 131 VFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|254480948|ref|ZP_05094194.1| putative NADH dehydrogenase, subunit C subfamily [marine gamma
proteobacterium HTCC2148]
gi|41582332|gb|AAS07946.1| NADH-quinone oxidoreductase, C/D subunit [uncultured marine
bacterium 463]
gi|214038743|gb|EEB79404.1| putative NADH dehydrogenase, subunit C subfamily [marine gamma
proteobacterium HTCC2148]
Length = 583
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV------DFLSRSNRFDVVYHFLSP 81
+L V+ L+ + + LR + F ++DL G+ + F +VYH LS
Sbjct: 34 NTPTLWVERHKLLEVLAHLRAE----FPMLLDLFGIDERLREHRPEAALDFTIVYHLLSL 89
Query: 82 KYNRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +R+K+ V+ + I+P A+W+ERE WDMYG+ F GHP+LRRIL +E
Sbjct: 90 EAREEIRIKVGVSSDDASVPSAHLIWPNANWYEREAWDMYGVEFSGHPNLRRILLPPTWE 149
Query: 141 GHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQE 175
GH LRKD P E+ P L +E
Sbjct: 150 GHALRKDHPARA-TEM-----------EPFSLDEE 172
>gi|326567655|gb|EGE17763.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis 12P80B1]
gi|326569466|gb|EGE19526.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis BC8]
Length = 582
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG------- 62
+ + + + + + G ++ V C +L+ + FLR P FV ++DL
Sbjct: 13 EELTANNHTYITQST-ADGIPTIWVACDELLDVLLFLRTLPK-PFVMLVDLSAIDERLRQ 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM+G+
Sbjct: 71 YRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDMFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F+GHP L RIL +EGHPLRK++
Sbjct: 131 VFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|326577450|gb|EGE27334.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis O35E]
Length = 582
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG------- 62
+ + + + + + G ++ V C +L+ + FLR P FV ++DL
Sbjct: 13 EELTANNHTYITQST-ADGIPTIWVACDELLDVLLFLRTLPK-PFVMLVDLSAIDERLRQ 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM+G+
Sbjct: 71 YRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDMFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F+GHP L RIL +EGHPLRK++
Sbjct: 131 VFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|332826699|gb|EGJ99521.1| hypothetical protein HMPREF9455_04117 [Dysgonomonas gadei ATCC
BAA-286]
Length = 542
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E++ I+ + +V G L++ V+ L L LR F + L G+D
Sbjct: 1 MENIRKVILEAVPEAVIE---EAGRLTVTVEPDKLRHLAKALRYHAEYPFDYLAMLTGMD 57
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ + ++ ++ A E + ++ I+ A + EREV+ M+GI F
Sbjct: 58 WGEKLGVNYLLASSKDLSKEVVMKTGTADRENPLLYTVTDIWETAHYNEREVYAMFGIRF 117
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFP 149
+PD+RR + + G PL+KD+
Sbjct: 118 INNPDMRRFFLNSDWNGFPLKKDYD 142
>gi|282860764|ref|ZP_06269830.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Streptomyces sp.
ACTE]
gi|282564500|gb|EFB70036.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Streptomyces sp.
ACTE]
Length = 464
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 14 NSFSGSVRFAV-------NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ +V + L++DV D ++ R C + L VD
Sbjct: 8 DRLPDAVTDVFGPDATAAYAYDLLTVDVPAADWIAALETARSALGCTY--FDWLSAVDEP 65
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
R L RRL V+ VA + VG+Y GA W ERE +M+GI FE
Sbjct: 66 GTGFRVCAHVAALGRGTVRRLLVRTTVAHDAATLPSAVGVYAGAAWHERETHEMFGIGFE 125
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVT 151
HP L +L GFEGHPLRKDF +
Sbjct: 126 DHPHLVPLLLPEGFEGHPLRKDFVLA 151
>gi|262373373|ref|ZP_06066652.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter junii SH205]
gi|262313398|gb|EEY94483.1| NADH dehydrogenase (quinone), D subunit [Acinetobacter junii SH205]
Length = 595
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + F + ++ V+ + + FLR +V + DL VD
Sbjct: 22 IVEELKTKFGENFYVQATCEEFPTVWVERARVQEVLMFLRKVER-PYVMLFDLSAVDERL 80
Query: 68 -------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDM 119
+ F V YH LS + N +R+K+A+ E I+P A+W+ERE +DM
Sbjct: 81 RVHRDGLPPSDFTVFYHLLSLERNSDIRIKVALNENDLNIPTATNIWPNANWYEREAYDM 140
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GI FEGHP LRRIL +EGHPLRK++ Y K + QEH +
Sbjct: 141 FGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDQAKQDFE-----QEHLRF 195
>gi|115523730|ref|YP_780641.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodopseudomonas palustris BisA53]
gi|122296834|sp|Q07QX3|NUOCD_RHOP5 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|115517677|gb|ABJ05661.1| NADH dehydrogenase I, D subunit [Rhodopseudomonas palustris BisA53]
Length = 581
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+L + F +V ++ +L + ++ +L+ D F + DL +D
Sbjct: 5 ELISDLRARFGQAVLSEQSTNDAFPTLWIAPDAAPAVHRYLKHDVAKPFALLADLWAIDE 64
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVW 117
+R +R + H +S N + +K + + I +YP ADW+ERE +
Sbjct: 65 TARKHREGQPPSGITIASHLISLGRNADIVLKCPLDAKAPRATSIASVYPNADWYEREAF 124
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE-------LHYDDKVKKVVYRP 169
D++G+ F+G D RRIL +EGHPLRKD P + +D + K ++ P
Sbjct: 125 DLFGVHFDGRHDHRRILLPPLWEGHPLRKDQPARATEKPPFVMTAARFDAEEKALMIDP 183
>gi|228968420|ref|ZP_04129413.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228791279|gb|EEM38888.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 221
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 69 LNQYVEVIREKVGEGALVDSYINKLSKDVPTLVVDQEKYYEVMESLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREEPQVESVTALWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 186 LGIVFKGHPNLTRILMPDDWVGHPLRKDY 214
>gi|262280144|ref|ZP_06057929.1| NADH:ubiquinone oxidoreductase 49 kDa subunit 7 [Acinetobacter
calcoaceticus RUH2202]
gi|262260495|gb|EEY79228.1| NADH:ubiquinone oxidoreductase 49 kDa subunit 7 [Acinetobacter
calcoaceticus RUH2202]
Length = 595
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 8 LGDYIVNSFSG--SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F V+ ++ V+ + + FLR +V + DL +D
Sbjct: 22 IVEELKTKFGENFYVQATFEEF--PTVWVERARVQEVLMFLRKVER-PYVMLFDLSAMDE 78
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVW 117
R +R F V YH LS + N +R+K+A+ E I+P A+W+ERE +
Sbjct: 79 RLRVHRDGLPASDFTVFYHLLSLERNSDIRIKVALNENDLNLPTATNIWPNANWYEREAY 138
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DM+GI FEGHP LRRIL +EGHPLRK++ Y K + QEH
Sbjct: 139 DMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDKAKQDFE-----QEHL 193
Query: 178 DY 179
+
Sbjct: 194 RF 195
>gi|299771417|ref|YP_003733443.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter sp. DR1]
gi|298701505|gb|ADI92070.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter sp. DR1]
Length = 595
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 8 LGDYIVNSFSG--SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F V+ ++ V+ + + FLR +V + DL +D
Sbjct: 22 IVEELKTKFGENFYVQATFEEF--PTVWVERARVQEVLMFLRKVER-PYVMLFDLSAMDE 78
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVW 117
R +R F V YH LS + N +R+K+A+ E I+P A+W+ERE +
Sbjct: 79 RLRVHRDGLPASDFTVFYHLLSLERNSDIRIKVALNENDLNLPTATNIWPNANWYEREAY 138
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHR 177
DM+GI FEGHP LRRIL +EGHPLRK++ Y K + QEH
Sbjct: 139 DMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDKAKQDFE-----QEHL 193
Query: 178 DY 179
+
Sbjct: 194 RF 195
>gi|108759239|ref|YP_630947.1| NADH dehydrogenase I subunit C [Myxococcus xanthus DK 1622]
gi|108463119|gb|ABF88304.1| NADH dehydrogenase I, C subunit [Myxococcus xanthus DK 1622]
Length = 156
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL---SRSNRFDVVYHFLSPKYNRRLRV 89
+ L + +FL++DP F + VD L RF+VVY S K + +R+
Sbjct: 10 VIHADSLPKVAAFLKNDPELEFKLFGSIDAVDRLHLAENDPRFEVVYFLYSLKRHEHVRL 69
Query: 90 KIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K+ V+E V V ++ GA+W+ER +D YGI F+GHPDLRRIL FEGHPLRKD+
Sbjct: 70 KVRVSEANPVVPTLVPLFRGANWWERLTFDFYGIRFDGHPDLRRILLYDEFEGHPLRKDY 129
Query: 149 PVT 151
+
Sbjct: 130 ALR 132
>gi|322378680|ref|ZP_08053113.1| NADH dehydrogenase subunit C [Helicobacter suis HS1]
gi|322380175|ref|ZP_08054410.1| NADH dehydrogenase subunit C [Helicobacter suis HS5]
gi|321147390|gb|EFX42055.1| NADH dehydrogenase subunit C [Helicobacter suis HS5]
gi|321148897|gb|EFX43364.1| NADH dehydrogenase subunit C [Helicobacter suis HS1]
Length = 265
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 19 SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF 78
+ V+ ++ + L+ + + + ++ +DFL + F++ Y F
Sbjct: 49 KILENFIETNTAVFVVEVTEVAEIAKRLK---NLGYETLSEMSAIDFLEQRGEFELFYQF 105
Query: 79 LSPKYNR----RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
+S N RLR+K + +G P++ ++ A W ERE +DM+GI FEGHP L RIL
Sbjct: 106 VSYLPNFVQKRRLRLKATLKQGAKAPTLSHLFRSALWSEREAYDMFGIVFEGHPHLIRIL 165
Query: 135 TDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ GHPL K +P+ G + + K
Sbjct: 166 MPEDWVGHPLLKSYPLKGDEHAAWYEVDK 194
>gi|159036130|ref|YP_001535383.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Salinispora
arenicola CNS-205]
gi|157914965|gb|ABV96392.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Salinispora
arenicola CNS-205]
Length = 235
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGEL----SLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
++++G + + S G+ ++DV RDD
Sbjct: 2 NLDEVGQRMAALLAPVEVTTSVSGGQAHARATVDVPSASWPDALRAARDDSDLACDYFDW 61
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
L VD L V + ++ LR ++ V S+V +YPGA W ERE +M
Sbjct: 62 LSAVDELEAGFDVVVHLWSTAHRHGLLLRTRVP-RTAPRVASVVTVYPGAAWHERETHEM 120
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+GI F H L+ +L FEGHPLRKDF +
Sbjct: 121 FGIDFVDHAGLKPLLLPPEFEGHPLRKDFVLA 152
>gi|304413373|ref|ZP_07394846.1| NADH:ubiquinone oxidoreductase, chain C,D [Candidatus Regiella
insecticola LSR1]
gi|304284216|gb|EFL92609.1| NADH:ubiquinone oxidoreductase, chain C,D [Candidatus Regiella
insecticola LSR1]
Length = 599
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 9/130 (6%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLS 80
G L + L+ + +L+ P +V + DL GVD R+ R F V YH LS
Sbjct: 45 GMPVLWIKKEKLLDVMLWLKKQPQ-PYVMLFDLHGVDERQRTYRQDLPAADFSVFYHLLS 103
Query: 81 PKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ NR + +K+A++E +PS+ I+P A+W+ERE W+M+GI FEGHP L RI+ +
Sbjct: 104 IERNRDIMLKVALSEKALQLPSVQQIFPNANWYERETWEMFGITFEGHPHLTRIMMPQSW 163
Query: 140 EGHPLRKDFP 149
+GHPLRKD+P
Sbjct: 164 QGHPLRKDYP 173
>gi|326567953|gb|EGE18050.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis BC1]
Length = 582
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + + + + + G ++ V C +L+ + FLR P FV ++DL +D R
Sbjct: 13 EELTANNHTYITQST-ADGIPTIWVACDELLDVLLFLRTLPK-PFVMLVDLSAIDERLRQ 70
Query: 70 NR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM+G+
Sbjct: 71 YRRGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDMFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F+GHP L RIL +EGHPLRK++
Sbjct: 131 VFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|226953550|ref|ZP_03824014.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter sp. ATCC 27244]
gi|294649462|ref|ZP_06726886.1| NADH-quinone oxidoreductase subunit C [Acinetobacter haemolyticus
ATCC 19194]
gi|226835728|gb|EEH68111.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter sp. ATCC 27244]
gi|292824632|gb|EFF83411.1| NADH-quinone oxidoreductase subunit C [Acinetobacter haemolyticus
ATCC 19194]
Length = 595
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + F + ++ V+ + + FLR +V + DL VD
Sbjct: 22 IVEELKTKFGENFYVQTTCEEFPTVWVERARVQEVLMFLRKVER-PYVMLFDLSAVDERL 80
Query: 68 -------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDM 119
+ F V YH LS + N +R+K+A+ E I+P A+W+ERE +DM
Sbjct: 81 RVHRDGLPPSDFTVFYHLLSLERNSDIRIKVALNENDLSIPTATNIWPNANWYEREAYDM 140
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GI F GHP LRRIL +EGHPLRK++ Y K + QEH +
Sbjct: 141 FGIDFAGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQDQAKQDFE-----QEHLRF 195
>gi|238784998|ref|ZP_04628996.1| NADH-quinone oxidoreductase subunit C/D [Yersinia bercovieri ATCC
43970]
gi|238714114|gb|EEQ06128.1| NADH-quinone oxidoreductase subunit C/D [Yersinia bercovieri ATCC
43970]
Length = 598
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + SFLR P +V + DL GVD R++
Sbjct: 28 LSNRFGPEAFVVQATRTGMPVVWVKREQLLEIMSFLRKQPK-PYVMLFDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A++E + VP+ I+P A+W+ERE W+M+GI
Sbjct: 87 RQGLPEADFSVFYHLLSIERNRDIMLKVALSEKELHVPTATKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|239828581|ref|YP_002951205.1| NADH dehydrogenase subunit C [Geobacillus sp. WCH70]
gi|239808874|gb|ACS25939.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus sp.
WCH70]
Length = 408
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I V S +L + FL+ + F + +L
Sbjct: 256 LDKYVKVIREHLGEDVLEDAYINRLSKDVPTLVAKKDTYYKIAEFLKYNEQLSFDYLSEL 315
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF + V H S K + + +K+ + + + S+V ++ GA+W E E +D+
Sbjct: 316 HGTDFQTHME---VYVHLYSYKKRQAVALKVKIDRDQPEIDSLVPLWQGANWPECEAYDL 372
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RI + G+PLRKD+
Sbjct: 373 LGIRFKGHPNLIRIFLGEDWVGYPLRKDY 401
>gi|228936582|ref|ZP_04099377.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823097|gb|EEM68934.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 343
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 5 IEDLGDYIVNSFSGSVRF----AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I + S +L V+ + LR F + +L
Sbjct: 191 LNQYVEVIKGKIGEDILVDSYINKLSKDVPTLVVEPAKYYEVMELLRFHEGLAFDYMSEL 250
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
DF++ + ++ + + E V S+ ++ GADW ERE +D+
Sbjct: 251 HATDFVTHMEVYVHLFSYGKKQSVVVKVKLD--REAPQVESVTALWKGADWPEREAYDLL 308
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 309 GIVFKGHPNLSRILMPDDWVGHPLRKDY 336
>gi|83589828|ref|YP_429837.1| NADH (or F420H2) dehydrogenase, subunit C [Moorella thermoacetica
ATCC 39073]
gi|123524685|sp|Q2RJU5|NUOC_MOOTA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|83572742|gb|ABC19294.1| NADH dehydrogenase subunit C [Moorella thermoacetica ATCC 39073]
Length = 148
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ + F V +L V L++L + L++ F + DL VD
Sbjct: 1 MDNFIQELQRLFPD--LEVREGVDVPALVVPADQLLALMTELKEKRGFNF--LADLTAVD 56
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
+ R ++VYH LS +RVK+ + VPS+ ++P A+ ERE +D+ G+
Sbjct: 57 YPE-DERIEMVYHLLSVPGMAEIRVKVNLDRQHPEVPSLTALWPAANVQEREAFDLMGVK 115
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVT 151
F GHPDL+RIL F GHPLRKDF +
Sbjct: 116 FPGHPDLKRILCPDDFVGHPLRKDFRLQ 143
>gi|77164634|ref|YP_343159.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Nitrosococcus oceani ATCC 19707]
gi|123594560|sp|Q3JC17|NUOCD_NITOC RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|76882948|gb|ABA57629.1| NADH dehydrogenase subunit D / NADH dehydrogenase subunit C
[Nitrosococcus oceani ATCC 19707]
Length = 593
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 8 LGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ + + + F + G + + + + +L+ + + + DL +D
Sbjct: 18 IAEILYHQFGEANFIRQETHDGVPTFWITKAQVSKILRYLKAELAPPYPMLYDLTAIDER 77
Query: 67 -------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
++ F +VYH LS N LR+K+ + I I+P A+W+EREVWD
Sbjct: 78 VRTHRPGQPASDFTLVYHLLSFIRNEDLRLKVPLQGESPSLPTITPIWPAANWYEREVWD 137
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
++GI FEGHP L RIL ++GHPLRKD P E+
Sbjct: 138 LFGINFEGHPHLSRILLPPTWQGHPLRKDHPARA-TEV 174
>gi|328884357|emb|CCA57596.1| NADH-ubiquinone oxidoreductase chain C [Streptomyces venezuelae
ATCC 10712]
Length = 513
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 12 IVNSFSGSVRF-------AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ +S GSV A + L++DV ++ RD C + L VD
Sbjct: 7 LHDSLPGSVTDLFGEEATAEQAYDLLTVDVPPASWIAALETARDTLGCTY--FDWLSAVD 64
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIF 123
R L RRL V+ V V +G+Y GA W ERE +M+G+
Sbjct: 65 EPGTGFRVCAHVVALGEGRPRRLLVRTTVPHAAPVLPTAIGVYAGAGWHERETAEMFGVD 124
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVT 151
F GHP L +L FEGHPLRKDF +
Sbjct: 125 FTGHPHLVPLLLPENFEGHPLRKDFVLA 152
>gi|326559971|gb|EGE10369.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Moraxella
catarrhalis 46P47B1]
Length = 522
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG------- 62
+ + + + + + G ++ V C +L+ + FLR P FV ++DL
Sbjct: 13 EELTANNHTYITQST-ADGIPTIWVACDELLDVLLFLRTLPK-PFVMLVDLSAIDERLRQ 70
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ F V YH +S + N +R+K+A+ EG+ VPS IYP A+W+EREVWDM+G+
Sbjct: 71 YRHGLPDSDFTVFYHLMSLERNSDIRIKVALKEGEHVPSATKIYPNANWYEREVWDMFGV 130
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDF 148
F+GHP L RIL +EGHPLRK++
Sbjct: 131 VFDGHPHLTRILLPKYWEGHPLRKEY 156
>gi|254433721|ref|ZP_05047229.1| NADH dehydrogenase, subunit C subfamily, putative [Nitrosococcus
oceani AFC27]
gi|207090054|gb|EDZ67325.1| NADH dehydrogenase, subunit C subfamily, putative [Nitrosococcus
oceani AFC27]
Length = 582
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 8 LGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ + + + F + G + + + + +L+ + + + DL +D
Sbjct: 7 IAEILYHQFGEANFIRQETHDGVPTFWITKAQVSKILRYLKAELAPPYPMLYDLTAIDER 66
Query: 67 -------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
++ F +VYH LS N LR+K+ + I I+P A+W+EREVWD
Sbjct: 67 VRTHRPGQPASDFTLVYHLLSFIRNEDLRLKVPLQGESPSLPTITPIWPAANWYEREVWD 126
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
++GI FEGHP L RIL ++GHPLRKD P E+
Sbjct: 127 LFGINFEGHPHLSRILLPPTWQGHPLRKDHPARA-TEV 163
>gi|311278757|ref|YP_003940988.1| NADH dehydrogenase I, D subunit [Enterobacter cloacae SCF1]
gi|308747952|gb|ADO47704.1| NADH dehydrogenase I, D subunit [Enterobacter cloacae SCF1]
Length = 602
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 31 LRNRFGPDAFTVQPTRTGVPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 89
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 90 RDGLPAADFSVFYHLISIDRNRDIMLKVALSENDLNVPTFTKLFPNANWYERETWEMFGI 149
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F GHP+L RI+ +EGHPLRKD+P
Sbjct: 150 TFNGHPNLTRIMMPKTWEGHPLRKDYP 176
>gi|229032929|ref|ZP_04188884.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH1271]
gi|228728474|gb|EEL79495.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH1271]
Length = 221
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + + +L V+ + LR F + +L
Sbjct: 69 LNQYVEIIKGGVGEDTLVDSYINKLSKDVPTLVVEPSKYYEVMELLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + + V S+ + GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREEPQVESVTAFWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 186 LGIVFKGHPNLSRILMPDDWIGYPLRKDY 214
>gi|320009165|gb|ADW04015.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Streptomyces
flavogriseus ATCC 33331]
Length = 450
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 63/151 (41%), Gaps = 4/151 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ L D + + F A + L++DV RD C + L
Sbjct: 4 SETYDRLPDAVTDVFGADATAAH-AYDLLTVDVPAASWTEAMETARDVLGCTY--FDWLS 60
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMY 120
VD R L RRL ++ V +V VG+Y GA W ERE +M+
Sbjct: 61 AVDEPGTGFRVCAHVAALGDGTVRRLLLRTTVPHDAAVLPTAVGVYAGAAWHERETHEMF 120
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
GI FE HP L +L FEGHPLRKDF +
Sbjct: 121 GIGFEDHPHLVPLLLPDSFEGHPLRKDFVLA 151
>gi|93005405|ref|YP_579842.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Psychrobacter cryohalolentis K5]
gi|122415841|sp|Q1QD95|NUOCD_PSYCK RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|92393083|gb|ABE74358.1| NADH dehydrogenase I, D subunit [Psychrobacter cryohalolentis K5]
Length = 591
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ ++G ++ V DL+ + FLR P +V + DL +D R
Sbjct: 20 KELEEKYAGKFVVQHTVDDIPTVWVARADLLDVLLFLRKLPK-PYVMLFDLSAIDERLRQ 78
Query: 70 NR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYG 121
+R F V YH +S + N +R+K+A++E I+P A+W+EREVWDM+G
Sbjct: 79 HRQGLPDSDFTVFYHLMSLERNSDVRIKVALSEEDLNVPSATQIWPNANWYEREVWDMFG 138
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDF 148
I F GHP L RIL +EGHPLRK++
Sbjct: 139 IVFTGHPHLTRILLPKYWEGHPLRKEY 165
>gi|319650860|ref|ZP_08004997.1| hypothetical protein HMPREF1013_01603 [Bacillus sp. 2_A_57_CT2]
gi|317397458|gb|EFV78159.1| hypothetical protein HMPREF1013_01603 [Bacillus sp. 2_A_57_CT2]
Length = 459
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRFA----VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I + V S +L L FL+ + F + +L
Sbjct: 307 LDKYVKVIEENLGADVLEEYYINDLSKDVPTLVAKAESYFKLAEFLKYNEQLGFDYLSEL 366
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF +V H S K + + +K+ + K + S+ ++ GADW E E +D+
Sbjct: 367 HGTDF---ETHMEVYAHLYSYKKRQSVALKVKIDRDKPEIDSLQPLWAGADWPECETYDL 423
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RI+ + GHPLRKD+
Sbjct: 424 LGIQFKGHPNLYRIMLGEDWIGHPLRKDY 452
>gi|328950033|ref|YP_004367368.1| NAD(P)H-quinone oxidoreductase subunit J [Marinithermus
hydrothermalis DSM 14884]
gi|328450357|gb|AEB11258.1| NAD(P)H-quinone oxidoreductase subunit J [Marinithermus
hydrothermalis DSM 14884]
Length = 210
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ L + + + + G + + LV + + F + D+ G+D
Sbjct: 1 MQRLQRVLEEARAQRF-EIEEAHGNTWITLPRDGLVDRMAHYKT---LGFNYLADIIGID 56
Query: 65 FLSRSNR----FDVVYHFLSP-----KYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFER 114
+L+ + F VVY +S R V++ V E +P++ GI+ A+W ER
Sbjct: 57 YLTYPDPKPERFCVVYELVSLPGWKDGDGSRFFVRVYVPEANPVLPTVTGIWGSANWLER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
E++D++GI FEGHPDLR+ILT +GHPLRKDFP+
Sbjct: 117 EIYDLFGIRFEGHPDLRKILTPEDLDGHPLRKDFPL 152
>gi|116515040|ref|YP_802669.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. Cc (Cinara cedri)]
gi|122285564|sp|Q057X3|NUOCD_BUCCC RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|116256894|gb|ABJ90576.1| NADH dehydrogenase I chain C [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 578
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN-------RFDVVYHFLSPKY 83
L +D L+ + FL+ + C + + DL G+D +R N F V Y+F S
Sbjct: 25 ILWIDSTILIQVIGFLKKNNTCSYEILFDLFGIDERTRKNVKSFPNADFTVSYYFFSISN 84
Query: 84 NRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N L +K+A+ + +P+I I+ A+W+ERE+WDM+GI F HP L RIL + GH
Sbjct: 85 NSDLILKVALLKEHLQLPTISSIFLNANWYEREIWDMFGIVFNNHPYLTRILMPKNWVGH 144
Query: 143 PLRKDF 148
PLRKD+
Sbjct: 145 PLRKDY 150
>gi|294630834|ref|ZP_06709394.1| dehydrogenase [Streptomyces sp. e14]
gi|292834167|gb|EFF92516.1| dehydrogenase [Streptomyces sp. e14]
Length = 239
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
G+ A S L++DV ++ RD+ C + L VD F
Sbjct: 12 EELFGAAATAEESYEVLTVDVPPDAWIAALLTARDELGCTY--FDWLSAVDEPGTG--FR 67
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
V H ++ RRL V+ V V V +Y GA W ERE +M+G+ F GHP L
Sbjct: 68 VSAHVVALAPVRRLLVRTTVPHDAPVLPTAVEVYAGAAWHERETHEMFGVGFTGHPALDH 127
Query: 133 ILTDYGFEGHPLRKDFPVT 151
+L FEGHPLRKDF +
Sbjct: 128 LLLPENFEGHPLRKDFVLA 146
>gi|313895797|ref|ZP_07829351.1| NADH dehydrogenase, C subunit [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975222|gb|EFR40683.1| NADH dehydrogenase, C subunit [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 162
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
++ I F + A + ++ + +L+S ++LR D F + +L VD
Sbjct: 9 EMLAAIKEQFPAAEYDAEAAR--PAVYIGADELISFLTYLRSDAALAFTRLENLTAVD-- 64
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
+RF+ VYH +P L VK+ + ++PGA++ EREV+D+ GI F
Sbjct: 65 -WKDRFETVYHLFAPASGHWLTVKVTLPHDAPRVPSATAVFPGAEFEEREVYDLMGIAFT 123
Query: 126 GHPDLRRILTDYGFEGHPLRKDF 148
GHPDLRR+ F GHPLRKDF
Sbjct: 124 GHPDLRRVFLPENFAGHPLRKDF 146
>gi|50083951|ref|YP_045461.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Acinetobacter sp. ADP1]
gi|81393678|sp|Q6FE69|NUOCD_ACIAD RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|49529927|emb|CAG67639.1| NADH dehydrogenase I chain C,D [Acinetobacter sp. ADP1]
Length = 595
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + F + ++ V+ + + FLR +V + DL +D
Sbjct: 22 IVEELKTKFGENFYVQTTCEEFPTVWVERSRVQEVLMFLRKVDR-PYVMLFDLSAMDERL 80
Query: 68 RSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDM 119
R +R F V YH LS + N +R+K+A+ E I+P A+W+ERE +DM
Sbjct: 81 RVHRDGLPASDFTVFYHLLSLERNSDIRIKVALNESDLNIPTATNIWPNANWYEREAYDM 140
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDY 179
+GI FEGHP LRRIL +EGHPLRK++ Y K + QEH +
Sbjct: 141 FGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYMQNQAKQDFE-----QEHLRF 195
>gi|307822803|ref|ZP_07653034.1| NADH dehydrogenase I, D subunit [Methylobacter tundripaludum SV96]
gi|307736407|gb|EFO07253.1| NADH dehydrogenase I, D subunit [Methylobacter tundripaludum SV96]
Length = 592
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKY 83
+L + +L + +L+ + + DL +D R+ R F VVYH LS
Sbjct: 41 TLWISRPNLRANLRYLKLQADSPYGLLFDLTAIDERQRTQRQGLPDSEFTVVYHLLSFDR 100
Query: 84 NRRLRVKI-AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N +R+K+ S+P+I ++P A+W+EREVWDM+GI F+GHP L+RI+ ++GH
Sbjct: 101 NEDIRLKVALTEADLSLPTISDMWPSANWYEREVWDMFGIVFDGHPHLKRIIMPPTWQGH 160
Query: 143 PLRKDF 148
PLRKD
Sbjct: 161 PLRKDH 166
>gi|212640516|ref|YP_002317036.1| NADH dehydrogenase subunit C [Anoxybacillus flavithermus WK1]
gi|212561996|gb|ACJ35051.1| NADH dehydrogenase subunit C [Anoxybacillus flavithermus WK1]
Length = 366
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRFA----VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I V S +L + FL+ + F + +L
Sbjct: 214 LDKYVKVIEEHLGTEVIENAYINRLSKDVPTLVAKKDTYYKVAEFLKYNEQLSFDYLSEL 273
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDM 119
G DF + V H S K + + +K+ + V +V ++PGA+W E E +D+
Sbjct: 274 HGTDFQTHME---VYVHLYSYKNRQSVALKVKIDRDNPVIDSLVPLWPGANWPECEAYDL 330
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI FEGHP+L RI + G+PLRKD+
Sbjct: 331 LGIRFEGHPNLIRIFLGENWVGYPLRKDY 359
>gi|154173814|ref|YP_001407460.1| NADH dehydrogenase subunit C [Campylobacter curvus 525.92]
gi|112803270|gb|EAU00614.1| NADH dehydrogenase subunit c [Campylobacter curvus 525.92]
Length = 264
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ + + +L + +D G L+ + + +L VDF++ ++V Y L
Sbjct: 50 ILESFVELEQLVVIIDAGQNFKTLEILK---AFGYEQLSELAAVDFIADRGGYEVFYQLL 106
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
S N+R RVK VA+G+++ S+ IY A+W ERE++D+ G+ GHP+L+R++ +
Sbjct: 107 SISKNKRARVKCFVAKGEALKSVSEIYKSANWAEREMYDLSGVLLSGHPNLKRLIMPDDW 166
Query: 140 EGHPLRKDFPVTG 152
HPL K +P+ G
Sbjct: 167 YSHPLLKSYPLQG 179
>gi|159901493|ref|YP_001547740.1| NADH (or F420H2) dehydrogenase subunit C [Herpetosiphon aurantiacus
ATCC 23779]
gi|159894532|gb|ABX07612.1| NADH (or F420H2) dehydrogenase, subunit C [Herpetosiphon
aurantiacus ATCC 23779]
Length = 178
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
V LV + F+RD + + ++ VD+L + V + + + LRV++
Sbjct: 49 VVKAEALVEVAHFIRD--KFGYTLLSNITAVDYLKQGLIEVVYQFYNAAEGGPDLRVRVR 106
Query: 93 V---AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ E VPS+ +PGAD ERE +DMYG+ F GHP+L RI F+G P+RKDFP
Sbjct: 107 IGRSPEECIVPSLTPTWPGADLQEREAYDMYGVVFPGHPNLARIYMWDEFKGFPMRKDFP 166
Query: 150 VTG 152
TG
Sbjct: 167 KTG 169
>gi|329938297|ref|ZP_08287748.1| dehydrogenase [Streptomyces griseoaurantiacus M045]
gi|329302786|gb|EGG46676.1| dehydrogenase [Streptomyces griseoaurantiacus M045]
Length = 484
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A S L++DV + ++ RD C + L VD F V H ++
Sbjct: 21 AEESYDLLTVDVPPTEWITALRTARDGLGCTY--FDWLSAVDEPGTG--FRVSAHVVALS 76
Query: 83 YNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RRL V+ V V V +Y GA W ERE +M+G+ FEGHP L +L FEG
Sbjct: 77 PVRRLLVRTTVPHDAPVLPTAVDVYAGAGWHERETHEMFGVGFEGHPALDHLLLPETFEG 136
Query: 142 HPLRKDFPVT 151
HPLRKDF +
Sbjct: 137 HPLRKDFVLA 146
>gi|326442820|ref|ZP_08217554.1| putative NADH dehydrogenase subunit [Streptomyces clavuligerus ATCC
27064]
Length = 413
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + L D + F A ++ L++DV +S + RD C + L
Sbjct: 1 MNAYDGLPDSVTEVFGPDAT-AEHAYDLLTVDVPADAWISALTTARDRLGCTY--FDWLS 57
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMY 120
VD R L RRL ++ V +V VG+Y GA W ERE +M+
Sbjct: 58 AVDEPGTGFRVCAHVVSLEGGRVRRLLLRTTVPHEAAVLPTAVGVYAGAGWHERETHEMF 117
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
G+ F GHP L +L GFEGHPLRKDF +
Sbjct: 118 GVGFTGHPHLVPLLLPEGFEGHPLRKDFVLA 148
>gi|294814430|ref|ZP_06773073.1| Dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|294327029|gb|EFG08672.1| Dehydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 413
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + L D + F A ++ L++DV +S + RD C + L
Sbjct: 1 MNAYDGLPDSVTEVFGPDAT-AEHAYDLLTVDVPADAWISALTTARDRLGCTY--FDWLS 57
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMY 120
VD R L RRL ++ V +V VG+Y GA W ERE +M+
Sbjct: 58 AVDEPGTGFRVCAHVVSLEGGRVRRLLLRTTVPHEAAVLPTAVGVYAGAGWHERETHEMF 117
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
G+ F GHP L +L GFEGHPLRKDF +
Sbjct: 118 GVGFTGHPHLVPLLLPEGFEGHPLRKDFVLA 148
>gi|229175971|ref|ZP_04303468.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus MM3]
gi|228607565|gb|EEK64890.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus MM3]
Length = 219
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + + +L V+ + LR F + +L
Sbjct: 67 LNQYVEVIKGKIGEDTLVDSYINKLSKDVPTLVVEPSKYYEVMELLRFHEGLAFDYMSEL 126
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 127 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPEVESVAALWKGADWPEREAYDL 183
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 184 LGIVFKGHPNLSRILMPDDWIGYPLRKDY 212
>gi|157144783|ref|YP_001452102.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Citrobacter koseri ATCC BAA-895]
gi|218528037|sp|A8ADV3|NUOCD_CITK8 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|157081988|gb|ABV11666.1| hypothetical protein CKO_00510 [Citrobacter koseri ATCC BAA-895]
Length = 600
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A++E VP+ ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIDRNRDIMLKVALSENDLHVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L R+L +EGHPLRKD+P
Sbjct: 148 TFDGHPHLTRLLMPPTWEGHPLRKDYP 174
>gi|229164243|ref|ZP_04292177.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus R309803]
gi|228619265|gb|EEK76157.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus R309803]
Length = 221
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I G++ + + +L VD + LR F + +L
Sbjct: 69 LNQYVEVIREKVGEGALVDSYINKLSKDVPTLVVDSAKYYEVMESLRFHEGLAFDYMSEL 128
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 129 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTTLWKGADWPEREAYDL 185
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 186 LGIVFKGHPNLSRILMPDDWVGYPLRKDY 214
>gi|291296254|ref|YP_003507652.1| NADH (or F420H2) dehydrogenase subunit C [Meiothermus ruber DSM
1279]
gi|290471213|gb|ADD28632.1| NADH (or F420H2) dehydrogenase, subunit C [Meiothermus ruber DSM
1279]
Length = 207
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++K+ +L +G + G + V G+ +L + L+ + + D+
Sbjct: 1 MQKLTELKK--QAQANGW--AIEEAHGNTWVVVPRGEFKALLTQLKSQ---GWNYLADVV 53
Query: 62 GVDFLSRSNR----FDVVYHFLSPKYNR-----RLRVKIAVAEGKSVPS-IVGIYPGADW 111
G+D+L F VVY +S + R+ +++ V E + ++ GAD+
Sbjct: 54 GIDYLKYPQPKPERFCVVYELVSLPGYQGGDGSRVFIRVYVPEANPSLPSLTDLWMGADY 113
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
EREV+D+ GI FEGHPDLR+ILT EGHPLRKDFP+
Sbjct: 114 LEREVFDLLGIRFEGHPDLRKILTPEDLEGHPLRKDFPL 152
>gi|146312472|ref|YP_001177546.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Enterobacter sp. 638]
gi|218528044|sp|A4WCR5|NUOCD_ENT38 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|145319348|gb|ABP61495.1| NADH dehydrogenase subunit D / NADH dehydrogenase subunit C
[Enterobacter sp. 638]
Length = 595
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 24 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 82
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A++E ++P A+W+ERE W+M+G+
Sbjct: 83 RHGLPAADFSVFYHLISIDRNRDIMLKVALSENDMRLPTFTKLFPNANWYERETWEMFGM 142
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L R+L + GHPLRKD+P
Sbjct: 143 TFDGHPHLTRLLMPPTWTGHPLRKDYP 169
>gi|256785903|ref|ZP_05524334.1| dehydrogenase [Streptomyces lividans TK24]
gi|289769796|ref|ZP_06529174.1| dehydrogenase [Streptomyces lividans TK24]
gi|289699995|gb|EFD67424.1| dehydrogenase [Streptomyces lividans TK24]
Length = 311
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ F A S L++DV ++ RD +C + L VD
Sbjct: 11 VEELFGTDAT-AEESYDLLTVDVPPASWITALETARDRLNCTY--FDWLSAVDEPGTG-- 65
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDL 130
F V H + RRL ++ V VG+Y GA W ERE +M+G+ F HP L
Sbjct: 66 FRVAAHVAALGPVRRLLLRTTVPHDAPALPSAVGVYAGAAWHERETHEMFGVAFADHPAL 125
Query: 131 RRILTDYGFEGHPLRKDFPVT 151
+L GFEGHPLRKDF +
Sbjct: 126 DHLLLPEGFEGHPLRKDFVLA 146
>gi|21222984|ref|NP_628763.1| dehydrogenase [Streptomyces coelicolor A3(2)]
gi|20520838|emb|CAD30897.1| putative dehydrogenase [Streptomyces coelicolor A3(2)]
Length = 453
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ F A S L++DV ++ RD +C + L VD
Sbjct: 11 VEELFGTDAT-AEESYDLLTVDVPPASWITALETARDRLNCTY--FDWLSAVDEPGTG-- 65
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDL 130
F V H + RRL ++ V VG+Y GA W ERE +M+G+ F HP L
Sbjct: 66 FRVAAHVAALGPVRRLLLRTTVPHDAPALPSAVGVYAGAAWHERETHEMFGVAFADHPAL 125
Query: 131 RRILTDYGFEGHPLRKDFPVT 151
+L GFEGHPLRKDF +
Sbjct: 126 DHLLLPEGFEGHPLRKDFVLA 146
>gi|308187602|ref|YP_003931733.1| NADH dehydrogenase I chain C/D [Pantoea vagans C9-1]
gi|308058112|gb|ADO10284.1| NADH dehydrogenase I chain C/D [Pantoea vagans C9-1]
Length = 599
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V ++ + FLR P +V + DL GVD R++
Sbjct: 28 LRNRFGPDAFTVQPTRTGIPVVWVKREQILEITEFLRKLPK-PYVMLYDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A++E +P+I ++P A+W+ERE W+M+GI
Sbjct: 87 RAGLPAADFSVFYHLLSIERNRDIMLKVALSENDMHLPTITRLFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPSTWEGHPLRKDYP 173
>gi|304398214|ref|ZP_07380088.1| NADH dehydrogenase I, D subunit [Pantoea sp. aB]
gi|304354080|gb|EFM18453.1| NADH dehydrogenase I, D subunit [Pantoea sp. aB]
Length = 599
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V ++ + FLR P +V + DL GVD R++
Sbjct: 28 LRNRFGPDAFTVQPTRTGIPVVWVKREQILEITEFLRKLPK-PYVMLYDLHGVDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH LS + NR + +K+A++E +P+I ++P A+W+ERE W+M+GI
Sbjct: 87 RAGLPAADFSVFYHLLSIERNRDIMLKVALSENDMHLPTITRLFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L RI+ +EGHPLRKD+P
Sbjct: 147 TFDGHPHLTRIMMPSTWEGHPLRKDYP 173
>gi|322831986|ref|YP_004212013.1| NADH dehydrogenase I, D subunit [Rahnella sp. Y9602]
gi|321167187|gb|ADW72886.1| NADH dehydrogenase I, D subunit [Rahnella sp. Y9602]
Length = 599
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + L+ +FLR P +V + DL G D R++
Sbjct: 28 LRNRFGPEAFTVQATRTGIPVVWFKREQLLEAITFLRKQPK-PYVMLFDLHGFDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A+AE VP+I ++P A+W+ERE W+M+GI
Sbjct: 87 RDGLPAADFSVFYHLISVERNRDIMIKVALAENDLHVPTITKVFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
F+GHP L RI+ +EGHPLRKD+P Y+ +K
Sbjct: 147 TFDGHPHLTRIMMPQTWEGHPLRKDYPARATEFDPYELTKQK 188
>gi|310768163|gb|ADP13113.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Erwinia
sp. Ejp617]
Length = 616
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G+D R++
Sbjct: 45 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEIVEFLRKLPK-PYVMLYDLHGMDERLRTH 103
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YHF+S + NR + +K+A++E VP++ I+P A+W+ERE W+M+GI
Sbjct: 104 RAGLPAADFSVFYHFISIERNRDIMLKVALSENDLHVPTLTKIFPNANWYERETWEMFGI 163
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
GHP L RI+ +EGHPLRKD+P
Sbjct: 164 DIVGHPHLTRIMMPQTWEGHPLRKDYP 190
>gi|302559059|ref|ZP_07311401.1| dehydrogenase [Streptomyces griseoflavus Tu4000]
gi|302476677|gb|EFL39770.1| dehydrogenase [Streptomyces griseoflavus Tu4000]
Length = 201
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A S G L++DV G + RD C + L VD F V H ++
Sbjct: 21 AEESYGVLTVDVPPGSWIPALEAARDRLGCTY--FDWLSAVDEPGTG--FRVTAHVVALA 76
Query: 83 YNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RRL ++ V V V +Y GA W ERE +M+G+ F GHP L +L FEG
Sbjct: 77 PVRRLLLRTTVPHEAPVLPSAVDVYAGAAWHERETHEMFGVGFTGHPGLDHLLLPDNFEG 136
Query: 142 HPLRKDFPVT 151
HPLRKDF +
Sbjct: 137 HPLRKDFVLA 146
>gi|3273737|gb|AAC38642.1| NADH dehydrogenase chain C [Pectobacterium carotovorum subsp.
carotovorum]
Length = 179
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V L+ + +FL+ P +V + DL G+D R++R
Sbjct: 34 PDAFTVQATRTGIPVVWVKREQLLDVVAFLKKQPK-PYVMLFDLHGMDERLRTHREGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V YH +S + NR + +K+A+AE +P++ ++P A+W+ERE W+M+G+ F+GHP
Sbjct: 93 ADYSVFYHIISIERNRDIMLKVALAENDLHLPTVTKLFPNANWYERETWEMFGMTFDGHP 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ +EGHPLRKD+P
Sbjct: 153 HLTRIMMPQTWEGHPLRKDYP 173
>gi|238920565|ref|YP_002934080.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Edwardsiella ictaluri 93-146]
gi|259514702|sp|C5B8I4|NUOCD_EDWI9 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|238870134|gb|ACR69845.1| NADH-quinone oxidoreductase subunit c/d [Edwardsiella ictaluri
93-146]
Length = 598
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPEAFSVQPTRTGMPVVWVKREQLLEVMAFLRQLPK-PYVMLFDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+ + +P++ ++P A+W+ERE +D++GI
Sbjct: 87 RQGLPAADFSVFYHLISIDRNRDIMLKVALAEQDLHLPTVTRLFPNANWYERETFDLFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L R+L ++GHPLRKD+P
Sbjct: 147 TFDGHPHLTRLLMPRTWQGHPLRKDYP 173
>gi|229087788|ref|ZP_04219908.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-44]
gi|228695516|gb|EEL48381.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
Rock3-44]
Length = 380
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
L DY +N S V +L + + + LR F + +L DF
Sbjct: 242 HSLEDYYINRLSKDV---------PTLVIKLENYYEVMELLRVHEGLAFDYMSELHATDF 292
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFF 124
++ V H S + + VK+ + V SI ++ GA+W ERE +D+ G+ F
Sbjct: 293 VTHME---VYVHLFSYSKKQSVAVKVKLDREAPRVASIAPLWNGANWPEREAYDLLGVVF 349
Query: 125 EGHPDLRRILTDYGFEGHPLRKDF 148
EGHP+L RIL + GHPLRKD+
Sbjct: 350 EGHPNLTRILMPDDWAGHPLRKDY 373
>gi|294637177|ref|ZP_06715485.1| NADH-quinone oxidoreductase, C/D subunit [Edwardsiella tarda ATCC
23685]
gi|291089641|gb|EFE22202.1| NADH-quinone oxidoreductase, C/D subunit [Edwardsiella tarda ATCC
23685]
Length = 598
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ F + G + V L+ + +FL+ P +V + DL G+D R++
Sbjct: 28 LTKRFGPEAFSVQPTRTGMPVVWVKREQLLEVMAFLKQLPK-PYVMLFDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+ + +P++ ++P A+W+ERE +D++GI
Sbjct: 87 RQGLPAADFSVFYHLISIDRNRDIMLKVALAEQDLHLPTVTRLFPNANWYERETFDLFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP L R+L ++GHPLRKD+P
Sbjct: 147 TFDGHPHLTRLLMPRTWQGHPLRKDYP 173
>gi|238061181|ref|ZP_04605890.1| NADH dehydrogenase, 30 kDa subunit [Micromonospora sp. ATCC 39149]
gi|237882992|gb|EEP71820.1| NADH dehydrogenase, 30 kDa subunit [Micromonospora sp. ATCC 39149]
Length = 227
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGEL----SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
E++G +V + A S G+ ++DV RDD L
Sbjct: 23 EEVGQRLVALLAPVEATASVSGGQAYARATIDVPPAGWRDALRVARDDADLACDFFDWLS 82
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMY 120
VD L+ VV H S + L ++ V+ +V +YPGA W ERE ++M+
Sbjct: 83 AVDQLAEGCE--VVAHLWSTGHRHGLLLRTRVSWDAPRVDSVVDLYPGAAWHERETFEMF 140
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
G+ F GH +LR +L FEGHPLRK+F +
Sbjct: 141 GVDFPGHGELRPLLLPPEFEGHPLRKEFVLA 171
>gi|188533349|ref|YP_001907146.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Erwinia
tasmaniensis Et1/99]
gi|218528046|sp|B2VIV5|NUOCD_ERWT9 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|188028391|emb|CAO96252.1| NADH dehydrogenase I C/D [Erwinia tasmaniensis Et1/99]
Length = 599
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEIVEFLRKLPK-PYVMLYDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YHF+S + NR + +K+A++E VP++ I+P A+W+ERE W+M+GI
Sbjct: 87 RAGLPAADFSVFYHFISIERNRDIMLKVALSENDLHVPTLTKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
GHP L RI+ +EGHPLRKD+P
Sbjct: 147 DVVGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|324329246|gb|ADY24506.1| NADH dehydrogenase subunit C [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 455
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFS-GSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + I ++ + +L V+ + LR F + +L
Sbjct: 303 LNQYVEVIKGKVEEDALVDCYINKLSKDVPTLVVEPSKYYEVMELLRSHEALAFDYMSEL 362
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 363 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTALWKGADWPEREAYDL 419
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + GHPLRKD+
Sbjct: 420 LGIVFKGHPNLSRILMPDDWIGHPLRKDY 448
>gi|270308196|ref|YP_003330254.1| NADH:quinone oxidoreductase 27 kD subunit [Dehalococcoides sp. VS]
gi|270154088|gb|ACZ61926.1| NADH:quinone oxidoreductase 27 kD subunit [Dehalococcoides sp. VS]
Length = 149
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++ + S + L V ++ +C L P + +L
Sbjct: 1 MTAALD--YQQLKTDLSKKLSGIEIQAEASFLLVPAENIHKVCECLTSLPSIRMDYLTNL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
D+ + L+ ++ + S++ I+ GA+ ERE++D++
Sbjct: 59 TAADYPEYIEVIFHLNSVEHNTSVT-LKTRLTDKANPKMYSVMDIWRGAELQEREIYDLF 117
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDF 148
G+ FE H L+RI GFEG+PLRKDF
Sbjct: 118 GVIFENHIGLKRIFLWEGFEGYPLRKDF 145
>gi|259907929|ref|YP_002648285.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Erwinia
pyrifoliae Ep1/96]
gi|224963551|emb|CAX55041.1| NADH-quinone oxidoreductase subunit C/D [Erwinia pyrifoliae Ep1/96]
gi|283477810|emb|CAY73726.1| NADH dehydrogenase I chain C/D [Erwinia pyrifoliae DSM 12163]
Length = 599
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEIVEFLRKLPK-PYVMLYDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YHF+S + NR + +K+A++E VP++ I+P A+W+ERE W+M+GI
Sbjct: 87 RAGLPAADFSVFYHFISIERNRDIMLKVALSENDLHVPTLTKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
GHP L RI+ +EGHPLRKD+P
Sbjct: 147 DIVGHPHLTRIMMPQTWEGHPLRKDYP 173
>gi|295982538|pdb|3MCR|A Chain A, Crystal Structure Of Nadh Dehydrogenase Subunit C
(Tfu_2693) Thermobifida Fusca Yx-Er1 At 2.65 A
Resolution
Length = 213
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 6 EDLGDYIVNS---FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ L + + ++ V GE++ V L+ + + LRDDP F + + G
Sbjct: 82 DALERSLKEIGTPYDTAISRVVVDRGEITFHVQREHLLDVATRLRDDPALRFELCLGVTG 141
Query: 63 VDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMY 120
V + N VY S +N +R++++ + +PSIV +YP DW ERE WD +
Sbjct: 142 VHYPEDEGNELHAVYALRSITHNYEIRLEVSCPDSDPHIPSIVSVYPTNDWHEREAWDFF 201
Query: 121 GIFFEGHPDLRR 132
GI F+GHP L R
Sbjct: 202 GIIFDGHPALTR 213
>gi|118579069|ref|YP_900319.1| NADH (or F420H2) dehydrogenase subunit C [Pelobacter propionicus
DSM 2379]
gi|118580048|ref|YP_901298.1| NADH (or F420H2) dehydrogenase subunit C [Pelobacter propionicus
DSM 2379]
gi|118581592|ref|YP_902842.1| NADH (or F420H2) dehydrogenase subunit C [Pelobacter propionicus
DSM 2379]
gi|118501779|gb|ABK98261.1| NADH dehydrogenase subunit C [Pelobacter propionicus DSM 2379]
gi|118502758|gb|ABK99240.1| NADH dehydrogenase subunit C [Pelobacter propionicus DSM 2379]
gi|118504302|gb|ABL00785.1| NADH dehydrogenase subunit C [Pelobacter propionicus DSM 2379]
Length = 154
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ I + S + +S G L L+ D G ++ L + L+ F ++D+ GVD+ R
Sbjct: 4 ETIRTTVSELYDRSWDSHGMLVLETDAGRILPLITRLK--RSFYFDLLLDITGVDYPERD 61
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHP 128
RFDVVYH SP+ N R+R+K+ V E + G+Y A + EREV +MYGI G+
Sbjct: 62 PRFDVVYHLYSPRNNVRVRIKVPVTEAEPNVPTLTGLYGSARYIEREVHEMYGIVSIGND 121
Query: 129 DLRRILTDYGFEGHPLRKDFPV 150
DLR IL GFEGHPLRKD+P+
Sbjct: 122 DLRPILLYEGFEGHPLRKDYPI 143
>gi|70917770|ref|XP_732968.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56504329|emb|CAH89046.1| hypothetical protein PC405169.00.0 [Plasmodium chabaudi chabaudi]
Length = 152
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 104 GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
+P WFERE +D+YGI FEGHPDLRRILTDYGF GHP RKDFP++G VE+
Sbjct: 2 ECWPAVGWFEREAFDLYGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGTVEM 54
>gi|320529347|ref|ZP_08030435.1| respiratory-chain NADH dehydrogenase, subunit [Selenomonas
artemidis F0399]
gi|320138313|gb|EFW30207.1| respiratory-chain NADH dehydrogenase, subunit [Selenomonas
artemidis F0399]
Length = 162
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I F + A ++ + +L+S ++LR + F + +L VD +R
Sbjct: 14 IKEQFPAAEYDAEAVR--PAVYIGADELISFLTYLRGNAALAFTRLENLTAVD---WKDR 68
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDL 130
F+ VYH +P L VK+ + ++PGA++ EREV+D+ GI F GHPDL
Sbjct: 69 FETVYHLFAPASGHWLTVKVTLPHDAPRVPSATAVFPGAEFEEREVYDLMGIAFTGHPDL 128
Query: 131 RRILTDYGFEGHPLRKDF 148
RR+ F GHPLRKDF
Sbjct: 129 RRVFLPENFAGHPLRKDF 146
>gi|37520319|ref|NP_923696.1| NADH dehydrogenase subunit J [Gloeobacter violaceus PCC 7421]
gi|81710971|sp|Q7NML5|NDHJ_GLOVI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|35211312|dbj|BAC88691.1| NADH dehydrogenase subunit I [Gloeobacter violaceus PCC 7421]
Length = 176
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 8 LGDYIVNS-FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ D + + N E+ + V+ L+++ L DD F + CG D
Sbjct: 23 ISDALKARGLPHELTGLDNRKIEI-IKVEPEHLIAVARALYDD---GFNYLACQCGFDEG 78
Query: 67 SRSNRFDVVYHFLSPKYNRR---LRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+ + + R +R+K+ + + I+ ADW ERE +DMYGI
Sbjct: 79 PGDSLGSMYHLTKLSDSADRPPEVRIKVFLPRDNPRVPSVYWIWKTADWQERESFDMYGI 138
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+EGHP+L RIL + G P+RKD+ F EL
Sbjct: 139 IYEGHPNLIRILMPEDWVGWPMRKDYVTPDFYELQ 173
>gi|292488841|ref|YP_003531728.1| NADH dehydrogenase I subunit C/D [Erwinia amylovora CFBP1430]
gi|292899992|ref|YP_003539361.1| NADH dehydrogenase I chain C/D [Erwinia amylovora ATCC 49946]
gi|291199840|emb|CBJ46964.1| NADH dehydrogenase I chain C/D [Erwinia amylovora ATCC 49946]
gi|291554275|emb|CBA21595.1| NADH dehydrogenase I chain C/D [Erwinia amylovora CFBP1430]
gi|312173001|emb|CBX81256.1| NADH dehydrogenase I chain C/D [Erwinia amylovora ATCC BAA-2158]
Length = 599
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEIIEFLRKLPK-PYVMLYDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
R F V YHF+S + NR + +K+A++E VP+I I+P A+W+ERE W+M+GI
Sbjct: 87 RDGLPAADFSVFYHFISIERNRDIMLKVALSENDLHVPTISKIFPNANWYERETWEMFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
GHP L RI+ +EGHPLRKD+P
Sbjct: 147 DIVGHPHLTRIMMPQSWEGHPLRKDYP 173
>gi|223936527|ref|ZP_03628438.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [bacterium Ellin514]
gi|223894691|gb|EEF61141.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [bacterium Ellin514]
Length = 210
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 2 VRKIEDLGDYIVNSFSGS---VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
+ +E + I + G+ + + + SL +D ++ FL DP F
Sbjct: 1 MDSLEQIKSRIEAAVPGARLEIVPNDSPSNQRSLLLDHEHAFAVAKFLCADPQLRFDYAS 60
Query: 59 DLCGVDFLS---------------------------RSNRFDVVYHFLSPKYNR-----R 86
++ GVD+L R + VYH S R
Sbjct: 61 NVTGVDWLDAVLKEKVKVKRLVDGVEKEVEESVEKKRPGYLEAVYHLYSMSLKHGPLIFR 120
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
LR + +PS+ I+ G ++ ERE++D+YGI F+GHPDLRR+L GF HP+RK
Sbjct: 121 LRTGNRIDRVH-LPSLTPIWRGVEFQEREIYDLYGIVFDGHPDLRRLLMWEGFADHPMRK 179
Query: 147 DF 148
D+
Sbjct: 180 DY 181
>gi|71065153|ref|YP_263880.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Psychrobacter arcticus 273-4]
gi|123649363|sp|Q4FU62|NUOCD_PSYA2 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|71038138|gb|AAZ18446.1| NADH dehydrogenase I, D subunit [Psychrobacter arcticus 273-4]
Length = 591
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-- 67
+ ++G ++ V DL+ + FLR P +V + DL +D
Sbjct: 20 KELEEKYAGKFVVQHTVDEIPTVWVARADLLDVLLFLRKLPK-PYVMLFDLSAIDERLRQ 78
Query: 68 -----RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYG 121
+ F V YH +S + N +R+K+A++E I+P A+W+EREVWDM+G
Sbjct: 79 HRQGLPESDFTVFYHLMSLERNSDVRIKVALSEEDLNVPSATQIWPNANWYEREVWDMFG 138
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDF 148
I F GHP L RIL +EGHPLRK++
Sbjct: 139 IVFTGHPHLTRILLPKYWEGHPLRKEY 165
>gi|212224720|ref|YP_002307956.1| Hydrogenase 4, component G or formate hydrogen lyase, subunit 5
[Thermococcus onnurineus NA1]
gi|212009677|gb|ACJ17059.1| Hydrogenase 4, component G or formate hydrogen lyase, subunit 5
[Thermococcus onnurineus NA1]
Length = 584
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 7 DLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ D I+ F +R + + + V+ DL + + + P + + D
Sbjct: 28 EYLDEIIEKFGEKIRDVKQAAYNQWIITVEREDLPEIVLYFLNHPEWKETQLSSMVATDE 87
Query: 66 LSRSNRFDVVYHFLSPKY--NRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
+ +F + Y + L V+ + E SI + GA+W+ERE +M G+
Sbjct: 88 RPLNGKFSITYWLSVNGKAGDFYLGVRAYLPEDDPRFTSIAAKHRGANWYEREAMEMLGL 147
Query: 123 FFEGHPDLRRILTDYGFEG--HPLRKDF 148
EGHPD RR++ + +PLRKDF
Sbjct: 148 TAEGHPDPRRLVLPDDWPSCVYPLRKDF 175
>gi|269139728|ref|YP_003296429.1| NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Edwardsiella tarda
EIB202]
gi|267985389|gb|ACY85218.1| NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Edwardsiella tarda
EIB202]
gi|304559595|gb|ADM42259.1| NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone
oxidoreductase chain D [Edwardsiella tarda FL6-60]
Length = 598
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + +FLR P +V + DL G+D R++
Sbjct: 28 LRNRFGPEAFSVQPTRTGMPVVWVKREQLLEVMAFLRQLPK-PYVMLFDLHGMDERLRTH 86
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGI 122
R F V YH +S NR + +K+A+ + +P++ ++P A+W+ERE +D++GI
Sbjct: 87 RQGLPAADFSVFYHLISIDRNRDIMLKVALAEQDLHLPTVTRLFPNANWYERETFDLFGI 146
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
F+GHP + R+L ++GHPLRKD+P
Sbjct: 147 TFDGHPHMTRLLMPRTWQGHPLRKDYP 173
>gi|301167765|emb|CBW27349.1| putative NADH dehydrogenase subunit [Bacteriovorax marinus SJ]
Length = 234
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 6 EDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ +++ SG + VG+ ++ V+ + +C L+ + + GVD
Sbjct: 3 SEVVEFLNAEVSGCNAVANIAEVGDSAVTVEPTYIKQVCQALKGSDKFKMNVLQVISGVD 62
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG-----KSVPSIVGIYPGADWFEREVWDM 119
+ N+ +V Y S N L +K VA G + S+ I+ A++ ERE +DM
Sbjct: 63 YPE-ENQIEVNYILASFIENTELILKTRVARGEGENLPKLESVCDIWKSANFQERETYDM 121
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT-GFVELHYDDKVK 163
G+ FE HPD RRIL +EG PLRKD+ V ++++ + + K
Sbjct: 122 LGVVFENHPDFRRILCPDDWEGFPLRKDYVVQEKYMDMVVNPEDK 166
>gi|94676822|ref|YP_588823.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|218528035|sp|Q1LT91|NUOCD_BAUCH RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|94219972|gb|ABF14131.1| NADH-quinone oxidoreductase chain C/D [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 595
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 14/154 (9%)
Query: 5 IEDLGDYI-VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
I +L +Y +F+ ++ G + V ++ FL+ P+ ++ + DL GV
Sbjct: 21 INELINYFGNETFT--IQSTRI--GVPVVWVTREQILDFLIFLKKKPN-SYLMLYDLHGV 75
Query: 64 DFLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFERE 115
D R+NR F V YH LS K N + +K+ + EG I+ A+W+ERE
Sbjct: 76 DERLRNNREGLPAVDFTVFYHLLSIKSNSDIILKVPLLEGDISLPTATNIFSNANWYERE 135
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
WDM+GI F GHP L RI+ + GHPLRKD+P
Sbjct: 136 TWDMFGIIFHGHPHLTRIIMPPSWVGHPLRKDYP 169
>gi|145592958|ref|YP_001157255.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Salinispora
tropica CNB-440]
gi|145302295|gb|ABP52877.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Salinispora
tropica CNB-440]
Length = 201
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGEL----SLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
++++G + + S G+ ++DV RDD
Sbjct: 2 TLDEVGQRMAALLAPVEVTTSVSGGQAYARATVDVPAESWHDALRAARDDDELACDFFDW 61
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWD 118
L VD L+ FDVV H S L ++ V V S+V IYPGA W ERE +
Sbjct: 62 LSAVDELAAG--FDVVVHLWSSTRRHGLLLRTRVPRAAPRVASVVDIYPGAAWHERETHE 119
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
M+GI F H L+ +L FEGHPLRK+F +
Sbjct: 120 MFGIDFADHAGLKPLLLPPEFEGHPLRKEFVLA 152
>gi|283832284|ref|ZP_06352025.1| NADH-quinone oxidoreductase, C/D subunit [Citrobacter youngae ATCC
29220]
gi|291071928|gb|EFE10037.1| NADH-quinone oxidoreductase, C/D subunit [Citrobacter youngae ATCC
29220]
Length = 600
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGDFLKRLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 REGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L R+L + ++GHPLRKD+P
Sbjct: 148 DIEGHPHLTRLLMPHTWQGHPLRKDYP 174
>gi|86606639|ref|YP_475402.1| NADH dehydrogenase subunit J [Synechococcus sp. JA-3-3Ab]
gi|123505799|sp|Q2JT68|NDHJ_SYNJA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|86555181|gb|ABD00139.1| NADH-ubiquinone/plastoquinone oxidoreductase, J subunit
[Synechococcus sp. JA-3-3Ab]
Length = 181
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR---LR 88
L+V+ L+ +C+ L F + CG D + + + R +R
Sbjct: 52 LEVERDFLLPVCTAL---YAYGFNYLECQCGYDLGAGQPLVSLYHLIKLADGADRPQEVR 108
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
V++ + + I+ ADW ERE +DMYGI FEGHP+L+RIL + G PLRKD
Sbjct: 109 VQVKLPRQDPRVPSVYWIWKSADWQERETYDMYGIIFEGHPNLKRILMPEDWIGWPLRKD 168
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 169 YITPDFYELQ 178
>gi|134299890|ref|YP_001113386.1| NADH (or F420H2) dehydrogenase subunit C [Desulfotomaculum reducens
MI-1]
gi|134052590|gb|ABO50561.1| NADH dehydrogenase subunit C [Desulfotomaculum reducens MI-1]
Length = 147
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/150 (35%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPH-CCFVNIIDLCGVDFL 66
L + I + V+ G L++ V+ L F+RD F + ++ G D+L
Sbjct: 6 LAEIIQELTNKYPSLEVSEKGHLTVPVES-----LMLFMRDLKEIYGFNYLTNVTGADYL 60
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
+VVY+ + L VK + VPS+V I+ GA W EREV+D+ GI F
Sbjct: 61 EY---LEVVYNLCIIGHPEMLHVKTRLDRNNPEVPSMVPIWGGAIWQEREVFDLLGIVFT 117
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
HPDLRRIL +EGHPLR+D+ G E
Sbjct: 118 DHPDLRRILLADDWEGHPLRRDYQWEGGRE 147
>gi|218534348|sp|Q57M30|NUOCD_SALCH RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
Length = 596
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 25 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 84 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 143
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 144 DIEGHPHLTRIMMPQTWEGHPLRKDYP 170
>gi|161502529|ref|YP_001569641.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|218534239|sp|A9MJ99|NUOCD_SALAR RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|160863876|gb|ABX20499.1| hypothetical protein SARI_00573 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 600
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|62180896|ref|YP_217313.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|224583188|ref|YP_002636986.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|254767807|sp|C0Q041|NUOCD_SALPC RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|62128529|gb|AAX66232.1| NADH dehydrogenase I chain C,D [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224467715|gb|ACN45545.1| NADH dehydrogenase I chain C,D [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322715375|gb|EFZ06946.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 600
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|213417786|ref|ZP_03350898.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 577
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 6 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 64
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 65 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 124
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 125 DIEGHPHLTRIMMPQTWEGHPLRKDYP 151
>gi|212288021|sp|P0A1Y7|NUOCD_SALTI RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|212288022|sp|P0A1Y6|NUOCD_SALTY RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534349|sp|B5FPG7|NUOCD_SALDC RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534350|sp|B5R307|NUOCD_SALEP RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534351|sp|B5RCF1|NUOCD_SALG2 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534352|sp|B4TBJ2|NUOCD_SALHS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|320086760|emb|CBY96532.1| NADH dehydrogenase I chain C, D [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|323241166|gb|EGA25202.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
Length = 596
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 25 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 84 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 143
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 144 DIEGHPHLTRIMMPQTWEGHPLRKDYP 170
>gi|16761251|ref|NP_456868.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16765653|ref|NP_461268.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|29141053|ref|NP_804395.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|56412777|ref|YP_149852.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|161612946|ref|YP_001586911.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167549675|ref|ZP_02343434.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|167994674|ref|ZP_02575765.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168229695|ref|ZP_02654753.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168237343|ref|ZP_02662401.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168242444|ref|ZP_02667376.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168261658|ref|ZP_02683631.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168465971|ref|ZP_02699841.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168817944|ref|ZP_02829944.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194448809|ref|YP_002046379.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194470489|ref|ZP_03076473.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194736818|ref|YP_002115395.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197248024|ref|YP_002147284.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197265050|ref|ZP_03165124.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197361711|ref|YP_002141347.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|198244423|ref|YP_002216396.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200389266|ref|ZP_03215878.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204929100|ref|ZP_03220243.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205353441|ref|YP_002227242.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857744|ref|YP_002244395.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|213647302|ref|ZP_03377355.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213853110|ref|ZP_03382642.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238912395|ref|ZP_04656232.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|81599847|sp|Q5PN53|NUOCD_SALPA RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534242|sp|A9N582|NUOCD_SALPB RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534332|sp|B5BCM0|NUOCD_SALPK RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534333|sp|B4TPK8|NUOCD_SALSV RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|218534337|sp|B5EZK7|NUOCD_SALA4 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|25285225|pir||AD0797 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16420867|gb|AAL21227.1| NADH dehydrogenase I chain C,D [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16503550|emb|CAD07558.1| NADH dehydrogenase I chain C; chain D [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29136679|gb|AAO68244.1| NADH dehydrogenase I chain C [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56127034|gb|AAV76540.1| NADH dehydrogenase I chain C; chain D [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161362310|gb|ABX66078.1| hypothetical protein SPAB_00652 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194407113|gb|ACF67332.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194456853|gb|EDX45692.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194712320|gb|ACF91541.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195631451|gb|EDX50011.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197093187|emb|CAR58631.1| NADH dehydrogenase I chain C; chain D [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197211727|gb|ACH49124.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197243305|gb|EDY25925.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197289727|gb|EDY29090.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197938939|gb|ACH76272.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199606364|gb|EDZ04909.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204321644|gb|EDZ06843.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205273222|emb|CAR38185.1| NADH dehydrogenase I chain C; chain D [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205325294|gb|EDZ13133.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205327498|gb|EDZ14262.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335700|gb|EDZ22464.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205338263|gb|EDZ25027.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205344904|gb|EDZ31668.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205349438|gb|EDZ36069.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709547|emb|CAR33892.1| NADH dehydrogenase I chain C; chain D [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261247532|emb|CBG25359.1| NADH dehydrogenase I chain C [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994421|gb|ACY89306.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301158884|emb|CBW18397.1| NADH dehydrogenase I chain C; chain D [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312913317|dbj|BAJ37291.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321222973|gb|EFX48044.1| NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone
oxidoreductase chain D [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322617072|gb|EFY13978.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322617622|gb|EFY14521.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322624748|gb|EFY21577.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322630297|gb|EFY27067.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322634478|gb|EFY31211.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322639188|gb|EFY35880.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322640051|gb|EFY36718.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322645728|gb|EFY42252.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322651504|gb|EFY47879.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322656063|gb|EFY52362.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322659416|gb|EFY55663.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665876|gb|EFY62059.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669884|gb|EFY66025.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673870|gb|EFY69967.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678628|gb|EFY74684.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322683576|gb|EFY79590.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687652|gb|EFY83622.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323130657|gb|ADX18087.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323193514|gb|EFZ78719.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198419|gb|EFZ83521.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323201933|gb|EFZ86995.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323208529|gb|EFZ93468.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323209762|gb|EFZ94686.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323218298|gb|EGA03008.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222945|gb|EGA07294.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227380|gb|EGA11545.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323232293|gb|EGA16396.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323235673|gb|EGA19757.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323244908|gb|EGA28910.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323250027|gb|EGA33921.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323254950|gb|EGA38741.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260330|gb|EGA43949.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323268094|gb|EGA51571.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323270813|gb|EGA54251.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|326624147|gb|EGE30492.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
gi|326628533|gb|EGE34876.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
gi|332989259|gb|AEF08242.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 600
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|118576845|ref|YP_876588.1| NADH-ubiquinone oxidoreductase, subunit C [Cenarchaeum symbiosum A]
gi|118195366|gb|ABK78284.1| NADH-ubiquinone oxidoreductase, subunit C [Cenarchaeum symbiosum A]
Length = 270
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L D I F + + + V D+ + F+RD F + + GVD+
Sbjct: 114 LTDRITEKFGDRAQVSFVQPRRTRIMVKSPDIKEVAEFIRD--ELNFDHAESVAGVDYPE 171
Query: 68 RSNRFDVVYHFLSP------------KYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
V + R V + +PS+ ++ ++ ERE
Sbjct: 172 NGEIEVVYHLGSYLDPSLSGQVLALATRAPREDVPDPGNDSTRLPSLRDVFYSVEFHERE 231
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTG 152
++M G++FEGHPD RR+L + PLRKDF + G
Sbjct: 232 CFEMLGVYFEGHPDNRRLLLPEDWADLPPLRKDFAIKG 269
>gi|194442956|ref|YP_002041586.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|218534331|sp|B4SYZ7|NUOCD_SALNS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|194401619|gb|ACF61841.1| NADH-quinone oxidoreductase, C/D subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
Length = 600
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|290958205|ref|YP_003489387.1| dehydrogenase [Streptomyces scabiei 87.22]
gi|260647731|emb|CBG70836.1| putative dehydrogenase [Streptomyces scabiei 87.22]
Length = 515
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A S G L++DV R C + L VD F V H ++
Sbjct: 19 AEESYGVLTVDVPSASWTEALRTARSTLGCTY--FDWLSAVDEPGTG--FRVAAHVVALA 74
Query: 83 YNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RRL ++ V V VGIY GA W ERE +M+G+ FEGHP L +L FEG
Sbjct: 75 PVRRLLLRTTVPHESPVLPTAVGIYAGAAWHERETHEMFGVRFEGHPALDHLLLPENFEG 134
Query: 142 HPLRKDFPVT 151
HPLRKDF +
Sbjct: 135 HPLRKDFVLA 144
>gi|271962235|ref|YP_003336431.1| NADH:ubiquinone oxidoreductase 27 kD subunit-like protein
[Streptosporangium roseum DSM 43021]
gi|270505410|gb|ACZ83688.1| NADH:ubiquinone oxidoreductase 27 kD subunit- like protein
[Streptosporangium roseum DSM 43021]
Length = 186
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I + + S GE+++DV GD + L R + L VD
Sbjct: 13 IQERYGTRAQ-VSESFGEVTVDVQAGDWIDLLESARSG---GYEFFDWLTAVDDPPDGFS 68
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ + LR ++ E +PS VG++ GADW ERE ++M+G+ FEGHP+L
Sbjct: 69 IVAHVFDPRSRGHLLLRTRVP-REDPRLPSAVGVFRGADWHERETFEMFGVIFEGHPNLV 127
Query: 132 RILTDYGFEGHPLRKDFPVT 151
+L GFEG PLRKDF +
Sbjct: 128 PLLLPEGFEGFPLRKDFVLA 147
>gi|283786354|ref|YP_003366219.1| NADH-quinone oxidoreductase subunit C/D [Citrobacter rodentium
ICC168]
gi|282949808|emb|CBG89431.1| NADH-quinone oxidoreductase subunit C/D [Citrobacter rodentium
ICC168]
Length = 600
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGDFLKKLPK-PYVMLYDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A+AE ++P A+W+ERE W+M+GI
Sbjct: 88 REGLPAADFSVFYHLISIERNRDIMLKVALAENDLRVPTFTRLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ + GHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPNTWTGHPLRKDYP 174
>gi|237732317|ref|ZP_04562798.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Citrobacter sp. 30_2]
gi|226907856|gb|EEH93774.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Citrobacter sp. 30_2]
Length = 600
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGDFLKRLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 REGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L R+L + +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRLLMPHTWEGHPLRKDYP 174
>gi|333031512|ref|ZP_08459573.1| NADH-ubiquinone oxidoreductase chain 49kDa [Bacteroides coprosuis
DSM 18011]
gi|332742109|gb|EGJ72591.1| NADH-ubiquinone oxidoreductase chain 49kDa [Bacteroides coprosuis
DSM 18011]
Length = 539
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + F ++ L + +D + FL F + +L G+DF
Sbjct: 3 VQARLTQKFPSAI--IEEKPDRLIVKIDSDIFREMAEFL-YKEDLHFDYMRNLTGIDFGE 59
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ KY LR I+ E + ++ ++ A +ERE +D YGI F H
Sbjct: 60 EGFGVIYHLESTANKYQVELRAVISNREQPYIHTVADLWKIASVYEREAYDFYGIIFLNH 119
Query: 128 PDLRRILTDYGFEGHPLRKDF 148
PD+RR+ ++G+PLRKD+
Sbjct: 120 PDMRRLFLRNEWKGYPLRKDY 140
>gi|289827446|ref|ZP_06546058.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 566
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|323702662|ref|ZP_08114323.1| NADH (or F420H2) dehydrogenase, subunit C [Desulfotomaculum
nigrificans DSM 574]
gi|323532325|gb|EGB22203.1| NADH (or F420H2) dehydrogenase, subunit C [Desulfotomaculum
nigrificans DSM 574]
Length = 144
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + + + GE+ + V L L + L++ F + ++ VD
Sbjct: 3 LPETITELKAKYPD-----IEVSGEI-ITVPLNQLTQLMTELKEKHGYNF--LTNVTAVD 54
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
+ + F++VY+ ++VK V + VPS+V I+ GA W ERE++D+ GI
Sbjct: 55 YP--PDYFEMVYNLSVVGAPDMIQVKTKVDRNRPEVPSMVPIWGGAIWQEREIYDLLGIT 112
Query: 124 FEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
F HPDLRRIL D +EGHPLRKD+ G E
Sbjct: 113 FTNHPDLRRILLDDNWEGHPLRKDYQWEGGRE 144
>gi|207711735|gb|ACI25322.1| NADH dehydrogenase subunit 9 [Physarum polycephalum]
Length = 165
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ + +L+ + +FL+ + + +I +D +++ NRF + Y F++ + + +
Sbjct: 27 ISIKPKNLLDIVNFLKKNTYL----LITATAIDQINKFNRFLLSYVFVTYTKAQHIYLTY 82
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP---DLRRILTDYGFEGHPLRKDF 148
+ PSI+ ++P A W ERE++D++GIFF DLRRILTDY F+GHPLRKDF
Sbjct: 83 --NTNLTTPSIIDLFPSAIWLEREIYDLFGIFFSNSNNTNDLRRILTDYHFKGHPLRKDF 140
Query: 149 PVTGFVE 155
+ G+ E
Sbjct: 141 SLIGYQE 147
>gi|297201677|ref|ZP_06919074.1| dehydrogenase [Streptomyces sviceus ATCC 29083]
gi|297147942|gb|EDY54984.2| dehydrogenase [Streptomyces sviceus ATCC 29083]
Length = 634
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A S L++DV ++ RD+ C + L VD F V H +
Sbjct: 21 AEESYEILTVDVPPTTWLTALRVARDELGCTY--FDWLSAVDEPGTG--FRVAAHVAALA 76
Query: 83 YNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RRL ++ ++ V V IY GA W ERE +M+G+ FEGHP L +L FEG
Sbjct: 77 PVRRLLLRTTISHDTPVLPTAVDIYAGAAWHERETHEMFGVTFEGHPSLDHLLLPETFEG 136
Query: 142 HPLRKDFPVT 151
HPLRKDF +
Sbjct: 137 HPLRKDFVLA 146
>gi|302870013|ref|YP_003838650.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Micromonospora
aurantiaca ATCC 27029]
gi|302572872|gb|ADL49074.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Micromonospora
aurantiaca ATCC 27029]
Length = 293
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
++DV RDD + L VD L+ FDVV H S ++ L ++
Sbjct: 33 TVDVPLASWADAVRAARDDAELDLDFLDWLSAVDELADG--FDVVLHLWSVRHRHGLLLR 90
Query: 91 IAVAEGKSV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
V V S+V ++PGA W ERE +M+GI F GH +LR +L FEGHPLRK+F
Sbjct: 91 TRVPRDTPVVASVVDLFPGAAWHERETHEMFGIDFAGHGELRPLLLPPEFEGHPLRKEFV 150
Query: 150 VT 151
+
Sbjct: 151 LA 152
>gi|167042390|gb|ABZ07117.1| putative Respiratory-chain NADH dehydrogenase, 30 Kd subunit
[uncultured marine crenarchaeote HF4000_ANIW97P9]
Length = 180
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
I DL + +S S + + ++V +++ + SF+RD F + +
Sbjct: 18 ISDLDKSLSDSISKKFSNVEIAYVKPNRIRVNVKKEEIIDVASFIRD--ELHFDHAESVG 75
Query: 62 GVDFLSRSNRFDVVYHFLSPKYN-------------RRLRVKIAVAEGKSVPSIVGIYPG 108
GVD+ + +VVYH S R + +PS+ ++P
Sbjct: 76 GVDYPE-DKQIEVVYHLGSYTDPSLSKHILALATRATREDNPRPGNDSTILPSLRDVFPS 134
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTG 152
+ ERE ++M G++F+GHPD RR+L + PLRKDF + G
Sbjct: 135 VSFHERECFEMLGVYFDGHPDNRRLLLPEDWADIPPLRKDFRIKG 179
>gi|91975808|ref|YP_568467.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodopseudomonas palustris BisB5]
gi|123722051|sp|Q13BH3|NUOCD_RHOPS RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|91682264|gb|ABE38566.1| NADH dehydrogenase I, D subunit [Rhodopseudomonas palustris BisB5]
Length = 581
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
DL + F +V + ++ + ++ FL+ + F ++DL +D
Sbjct: 5 DLVSELSARFGDAVLGEQITRERFPTVWIRPEASAAVHRFLKHEVDRPFRMLVDLWAIDE 64
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
+R +R + H +S + N +R+KIA+ SI G++P A W+ERE +
Sbjct: 65 TARKHREGQPPSGITIASHLMSHERNADIRLKIALDAEYPSTKSIAGVFPNAAWYEREAY 124
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
DM+G+ FE P +RIL G+EGHP+RK P
Sbjct: 125 DMFGVEFELQPHSQRILLPPGWEGHPMRKTQP 156
>gi|302039527|ref|YP_003799849.1| putative formate hydrogenlyase large subunit [Candidatus Nitrospira
defluvii]
gi|300607591|emb|CBK43924.1| putative Formate hydrogenlyase, large subunit [Candidatus
Nitrospira defluvii]
Length = 530
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + +F+ ++ G L V DL ++ FL +P + +
Sbjct: 9 EQVQAAFTQAITEVCAVHGVPMLRVKKQDLPTVAHFLHTNPGLRGSLSLLWAVDHRPREA 68
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
L+ + + L + + PSI A W+ERE+ D++G+ GHPD
Sbjct: 69 RYELCYLFTLAERKDWLLLATDLHGDEREFPSITPHLHAAKWYEREIRDLFGLVPIGHPD 128
Query: 130 LRRILTDYGFEG--HPLRKDFP 149
LRR++ + HPL++DFP
Sbjct: 129 LRRLVRHEHWPKGSHPLKRDFP 150
>gi|300087934|ref|YP_003758456.1| NADH dehydrogenase 24 kDa subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527667|gb|ADJ26135.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 150
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
G+ I F + ++ L VD L+ +C +L+D+ + L VD
Sbjct: 11 GEAINREFGTG----TAAADDVRLLVDGKRLLEVCRWLKDESPYRLDYLNSLTAVDN--- 63
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFFEG 126
F VVYH S +L K+ + + +S PS+ ++ GAD EREV+DM+GI F G
Sbjct: 64 KTHFSVVYHLSSLAMGGQLSFKVDLDDRQSPSLPSVTPVWRGADLQEREVFDMFGISFTG 123
Query: 127 HPDLRRILTDYGFEGHPLRKD 147
HP L+R+ GF G+PLRKD
Sbjct: 124 HPCLKRLFLWEGFPGYPLRKD 144
>gi|22298973|ref|NP_682220.1| NADH dehydrogenase subunit J [Thermosynechococcus elongatus BP-1]
gi|81743014|sp|Q8DJ01|NDHJ_THEEB RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|22295154|dbj|BAC08982.1| NADH dehydrogenase subunit I [Thermosynechococcus elongatus BP-1]
Length = 168
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR---LR 88
+ VD L+++C L D F + D + + R +R
Sbjct: 39 IKVDRDRLLAVCQTLYAD---GFNYLRCQAAYDSGPGQDLVSTYHLIKLSDNADRPPEVR 95
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V + I+ ADW ERE +DM+GI +EGHP+L+RIL + G PLRKD
Sbjct: 96 IKVFVPRDDPRVPSVYWIWKTADWQERESYDMFGIVYEGHPNLKRILMPEDWVGWPLRKD 155
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 156 YITPDFYELQ 165
>gi|323254450|gb|EGA38265.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
Length = 511
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|315503715|ref|YP_004082602.1| NADH dehydrogenase (ubiquinone) 30 kda subunit [Micromonospora sp.
L5]
gi|315410334|gb|ADU08451.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Micromonospora sp.
L5]
Length = 302
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGE----LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
E++G +V + A S G+ ++DV RDD + L
Sbjct: 4 EEVGRRVVALLAPVEATASVSGGQGYARATVDVPLASWADAVRAARDDAGLDLDFLDWLS 63
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDMY 120
VD L+ FDVV H S ++ L ++ V V S+V ++PGA W ERE +M+
Sbjct: 64 AVDELADG--FDVVLHLWSVRHRHGLLLRTRVPRDTPVVASVVDLFPGAAWHERETHEMF 121
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
GI F GH +LR +L FEGHPLRK+F +
Sbjct: 122 GIDFAGHGELRPLLLPPEFEGHPLRKEFVLA 152
>gi|213610190|ref|ZP_03370016.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 514
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|332885915|gb|EGK06159.1| hypothetical protein HMPREF9456_00033 [Dysgonomonas mossii DSM
22836]
Length = 543
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E++ I+ + + A+ L++ V+ L L LR+ F + L G D
Sbjct: 1 MENIKKVILEAVPEA---AIEDKTPLTVTVEPNKLRHLVKALRNYAAMPFDYLAMLTGTD 57
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
++ ++ A + ++ I+ A + EREV+ M GI F
Sbjct: 58 EGEMLMVTYLLCPSTDLSKEIAVKTGTANRVNPLLYTVTDIWETAHYNEREVFAMLGIRF 117
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFP 149
+PD+RR + + G PLRKD+
Sbjct: 118 INNPDMRRFFLNSDWVGFPLRKDYD 142
>gi|163847545|ref|YP_001635589.1| NADH (or F420H2) dehydrogenase subunit C [Chloroflexus aurantiacus
J-10-fl]
gi|222525395|ref|YP_002569866.1| NADH (or F420H2) dehydrogenase subunit C [Chloroflexus sp.
Y-400-fl]
gi|163668834|gb|ABY35200.1| NADH (or F420H2) dehydrogenase, subunit C [Chloroflexus aurantiacus
J-10-fl]
gi|222449274|gb|ACM53540.1| NADH (or F420H2) dehydrogenase, subunit C [Chloroflexus sp.
Y-400-fl]
Length = 173
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
+ LV+ F+RD F + D+ VD+L F++VY F P + +++ V
Sbjct: 49 IHPDHLVAAALFVRDTLGYAF--LSDIAVVDYLHAG-CFELVYRFYHPAGGPGIVLRVRV 105
Query: 94 AEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+ +P A++ ERE +D++GI F GHP LRRI FEG P+RKDFP G
Sbjct: 106 PRDAPSVPSLTPHWPAANFHEREAFDLFGIEFVGHPYLRRIYMWDEFEGFPMRKDFPRQG 165
>gi|284166440|ref|YP_003404719.1| NADH-ubiquinone oxidoreductase chain 49kDa [Haloterrigena
turkmenica DSM 5511]
gi|284016095|gb|ADB62046.1| NADH-ubiquinone oxidoreductase chain 49kDa [Haloterrigena
turkmenica DSM 5511]
Length = 561
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 3/152 (1%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ + + S + D+ + + LRD F ++ L ++ R
Sbjct: 26 EERLESLLSEYALRRDEHENAPGFVIRPDDVQEVLALLRD--EAGFDHLSCLTPQEYEDR 83
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ + + + L V++ + ++ ADW ERE +D+ GI +EGHP
Sbjct: 84 YESILHLTKYENRTHEVTLVVQLP-KHEPVCQTAEPVFRTADWHEREAFDLVGIEYEGHP 142
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELHYDD 160
D RRIL ++GHPL D+ + Y +
Sbjct: 143 DPRRILLPESWQGHPLALDYDQEKPQVVSYTE 174
>gi|86609774|ref|YP_478536.1| NADH dehydrogenase subunit J [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123501304|sp|Q2JJA8|NDHJ_SYNJB RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|86558316|gb|ABD03273.1| NADH-ubiquinone/plastoquinone oxidoreductase, J subunit
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 183
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR---LR 88
L+V+ L+ LC+ L F + CG D + + + R +R
Sbjct: 54 LEVERDFLLPLCTAL---YAYGFNYLECQCGYDLGAGQPLVSLYHLIKLSDGADRPQEVR 110
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+++ + + I+ ADW ERE +DMYGI FEGHP+L+RIL + G PLRKD
Sbjct: 111 LQVKLPRQDPRLPSVYWIWKSADWQERETYDMYGIVFEGHPNLKRILMPEDWIGWPLRKD 170
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 171 YITPDFYELQ 180
>gi|73748693|ref|YP_307932.1| proton-translocating NADH-quinone oxidoreductase, C subunit
[Dehalococcoides sp. CBDB1]
gi|147669452|ref|YP_001214270.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Dehalococcoides
sp. BAV1]
gi|289432719|ref|YP_003462592.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dehalococcoides sp.
GT]
gi|73660409|emb|CAI83016.1| proton-translocating NADH-quinone oxidoreductase, C subunit
[Dehalococcoides sp. CBDB1]
gi|146270400|gb|ABQ17392.1| NADH dehydrogenase subunit C [Dehalococcoides sp. BAV1]
gi|288946439|gb|ADC74136.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dehalococcoides sp.
GT]
Length = 149
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 1 MVRKIE--DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M ++ L + G L V D+ +C L P +
Sbjct: 1 MTAVLDYPQLKAALSKELPG----IEIQADGSFLLVSPEDMHKVCERLTSLPSIQMDYLT 56
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
+L D+ + ++ ++ + + S+V I+ GA+ ERE++D
Sbjct: 57 NLTAADYSEYIEIIFHLNSITHNTSAT-VKTRLTDKKNPKMASVVDIWRGAELQEREIYD 115
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
++G+FFE H L+RI GFEG+PLRKDF
Sbjct: 116 LFGVFFENHIGLKRIFLWEGFEGYPLRKDF 145
>gi|229136113|ref|ZP_04264867.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-ST196]
gi|228647358|gb|EEL03439.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus
BDRD-ST196]
Length = 149
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY 83
S +L + + LR F + +L DF++ V H S
Sbjct: 20 KLSKDVPTLVAEPSKYYEVMELLRFHEGLAFDYMSELHATDFVTHME---VYVHLFSYGK 76
Query: 84 NRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+ + VK+ + V S+ ++ GADW ERE +D+ GI FEGHP+L RIL + G+
Sbjct: 77 KQSVAVKVKLDREAPQVESVTPLWKGADWPEREAYDLLGIVFEGHPNLSRILMPDDWVGY 136
Query: 143 PLRKDF 148
PLRKD+
Sbjct: 137 PLRKDY 142
>gi|316935783|ref|YP_004110765.1| NADH dehydrogenase I subunit D [Rhodopseudomonas palustris DX-1]
gi|315603497|gb|ADU46032.1| NADH dehydrogenase I, D subunit [Rhodopseudomonas palustris DX-1]
Length = 581
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +L + F +V + ++ + + + FL+ + F ++D
Sbjct: 1 MSAS--ELVTELSARFKDAVLGQQVTADRFPTVWIRPDATIDVHRFLKQEIDRPFRMLVD 58
Query: 60 LCGVDFLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADW 111
L +D +R +R + H +S + N +R+KIA+ SI ++P A W
Sbjct: 59 LWAIDETARKHREGLPPSGITIASHLMSHERNADIRLKIALDAEYPRAKSIGTVFPNAPW 118
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ERE +DM+G+ FE P RIL G+EGHP+RK P
Sbjct: 119 YEREAYDMFGVEFEAQPHSLRILLPPGWEGHPMRKTQP 156
>gi|304407747|ref|ZP_07389398.1| NADH (or F420H2) dehydrogenase, subunit C [Paenibacillus
curdlanolyticus YK9]
gi|304343230|gb|EFM09073.1| NADH (or F420H2) dehydrogenase, subunit C [Paenibacillus
curdlanolyticus YK9]
Length = 193
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+L V L+ ++ + ++ GVD+ + + +
Sbjct: 71 TLVVRPEYLLRTAELFKEHASLSCRYLRNVSGVDYETHLEVVYHLVNLE--TGENYTIKS 128
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A + V S+ ++ A+W ERE++D+ G+ F+GHPD+RRI+ + G+PLRKD+
Sbjct: 129 RADRQDPIVDSVTPVWETANWNEREIYDLLGVQFKGHPDMRRIMMPDDWVGYPLRKDY 186
>gi|297159541|gb|ADI09253.1| dehydrogenase [Streptomyces bingchenggensis BCW-1]
Length = 485
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A S G L++DV + RD C + L VD R L P
Sbjct: 44 AEESYGLLTVDVPADAWIPALETARDALGCTY--FDWLSAVDEPGAGFRVAAHVVALGPA 101
Query: 83 YN------RRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
RRL V+ VA G+Y GA W ERE +M+GI F HP L +L
Sbjct: 102 AATAGPAVRRLLVRTTVAHDAPALPTATGVYAGAAWHERETHEMFGIDFADHPHLAPLLL 161
Query: 136 DYGFEGHPLRKDFPVT 151
GFEGHPLRKDF +
Sbjct: 162 PDGFEGHPLRKDFVLA 177
>gi|291515383|emb|CBK64593.1| NADH dehydrogenase subunit C /NADH dehydrogenase subunit D
[Alistipes shahii WAL 8301]
Length = 531
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 8/139 (5%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR 85
GE V + L+ + F + L G+D+ S N
Sbjct: 12 EAGEGMFTVPAEAFRGVAERLKAE---GFDFLRSLTGMDWGEEGFGVVYHLEATSTGENV 68
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+R E +PS+ ++ A+ ERE +D +GI F HPD+RR+ + GHPLR
Sbjct: 69 VVRTLTPERERPVLPSVCDLWKAAELNEREAFDYFGIRFLNHPDMRRLYLRDDWVGHPLR 128
Query: 146 KDF-----PVTGFVELHYD 159
KD+ P+ E+ D
Sbjct: 129 KDYDPASNPLRMSNEVSKD 147
>gi|119719101|ref|YP_919596.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermofilum
pendens Hrk 5]
gi|119524221|gb|ABL77593.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermofilum
pendens Hrk 5]
Length = 567
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 12/157 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +E L + I G + +L L V+ L +CS++ + +
Sbjct: 1 MNNGMERLEEKIRKEIGGLLLGVEKPYPDQLYLYVERTKLPEVCSYVYYELG---GFLST 57
Query: 60 LCGVDFLSRSNRFDVVYHFLSPK------YNRRLRVKIAVAEGKSVPSIVGIYPGADWFE 113
+ G D S + + Y F + + V S+ P A W+E
Sbjct: 58 MAGSDERSLHGAYRLYYVFSIEEGYEDGKKPWVVVVTNIPPHDTKFSSVTPKIPAASWYE 117
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDF 148
REV D+ G+ E HPD RR++ + HPLRK+F
Sbjct: 118 REVRDLLGLVPENHPDPRRLVLPDDWPEGVHPLRKEF 154
>gi|319760614|ref|YP_004124552.1| NADH-quinone oxidoreductase subunit C/D [Candidatus Blochmannia
vafer str. BVAF]
gi|318039328|gb|ADV33878.1| NADH-quinone oxidoreductase subunit C/D [Candidatus Blochmannia
vafer str. BVAF]
Length = 596
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 8 LGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ +++ F S + + + + +V + FL+ + +V + DL G+D
Sbjct: 20 ILSSLISKFGSSNFIVQFAYTDAVIVWISRQKIVPIIKFLKSNLK-PYVMLYDLHGIDER 78
Query: 67 S-------RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
F V YH +S N + +K+ + E I I+ A+W+ERE W+
Sbjct: 79 LRIHRENLPEADFTVFYHIMSISINSEIILKVPLLEKSMNVPTITSIFMNANWYERETWE 138
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
M+GI F+ HP+L RI+ ++G PLRK++P
Sbjct: 139 MFGIKFDNHPNLTRIIMPKYWKGFPLRKEYP 169
>gi|33519942|ref|NP_878774.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Candidatus
Blochmannia floridanus]
gi|81666913|sp|Q7VRV4|NUOCD_BLOFL RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|33504288|emb|CAD83180.1| NADH dehydrogenase I chain C; chain D [Candidatus Blochmannia
floridanus]
Length = 596
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ D ++ F ++ L + + ++ + FL+ V + DL G+D
Sbjct: 18 HKIWDSLITKFGSHDLILQSAYIDSLIIWIPKERIIPIMEFLKQIL-APHVMLYDLHGID 76
Query: 65 FLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREV 116
R R F V YH +S N + +K+ + E +I ++ A+W+ERE
Sbjct: 77 ERLRMYRKELPEADFTVFYHIMSMSRNYDVILKVPLLENAMNVTTITSVFMNANWYERET 136
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
W+M+GI F+ HP+L RI+ ++G PLRK++P
Sbjct: 137 WEMFGIHFDYHPNLTRIIMPKCWKGFPLRKEYP 169
>gi|238927267|ref|ZP_04659027.1| possible NADH (or F420H2) dehydrogenase, subunit C [Selenomonas
flueggei ATCC 43531]
gi|238884854|gb|EEQ48492.1| possible NADH (or F420H2) dehydrogenase, subunit C [Selenomonas
flueggei ATCC 43531]
Length = 162
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + +FS + A +L + +L+ L LRDD + ++ VD
Sbjct: 12 EALKVAFSSAEYDAETER--PALYIAAEELLGLLRVLRDDGTLQLTRLENVTAVD---WK 66
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHP 128
+RF++VYH SP L +K+ + V + ++PGA++ EREV+D+ GI F GHP
Sbjct: 67 DRFEMVYHLFSPTELHWLTLKVTLPHDAPVLPSVTPVFPGAEFEEREVYDLMGIVFTGHP 126
Query: 129 DLRRILTDYGFEGHPLRKDF 148
DLRR+ F GHPLRKDF
Sbjct: 127 DLRRVFHADDFIGHPLRKDF 146
>gi|297192750|ref|ZP_06910148.1| dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
gi|297151480|gb|EDY64970.2| dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
Length = 220
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ L D + F A S L++DV G ++ RD C + L VD
Sbjct: 5 DSLPDAVTEIFGEEAT-AERSYELLTVDVPVGSWIAALEIARDKLGCTY--FDWLSAVDE 61
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFF 124
R L + RRL V+ V G V +Y GA W ERE +M+G+ F
Sbjct: 62 PGTGFRICAHVVSLEGRAVRRLLVRTTVPHGAPSLPSAVDVYAGASWHERETHEMFGVDF 121
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVT 151
GHP +L GFEGHPLRKDF +
Sbjct: 122 TGHPHQVPLLLPDGFEGHPLRKDFVLA 148
>gi|149374625|ref|ZP_01892399.1| NADH dehydrogenase I, D subunit [Marinobacter algicola DG893]
gi|149361328|gb|EDM49778.1| NADH dehydrogenase I, D subunit [Marinobacter algicola DG893]
Length = 586
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + DL + + + G V +V + + L+ P F + DL
Sbjct: 6 MSKGTTDLESLLGDFREDVLHVQPTLTGMPVFWVSRESIVDILTHLKRQP-APFSMLYDL 64
Query: 61 CGVDFLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWF 112
VD R +R F V YH LS + N L +K+ + E V +W+
Sbjct: 65 SAVDERLRGHRNGLPEADFTVFYHLLSVERNEDLILKVGLPESDLRVPTVSKVFANANWY 124
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
ERE+ DM+GI GHP +RIL + GHPLRKD+P
Sbjct: 125 EREILDMFGIAVAGHPHPQRILMPPTWTGHPLRKDYP 161
>gi|217033583|ref|ZP_03439011.1| hypothetical protein HP9810_899g19 [Helicobacter pylori 98-10]
gi|216943929|gb|EEC23363.1| hypothetical protein HP9810_899g19 [Helicobacter pylori 98-10]
Length = 265
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GSSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|117619929|ref|YP_856316.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|218528032|sp|A0KJ65|NUOCD_AERHH RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|117561336|gb|ABK38284.1| NADH-quinone oxidoreductase chain c/d [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 601
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 16/154 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKY 83
+ + L+ + FLR P FV + DL D RS+R F V YH +S
Sbjct: 50 VVWLSRELLLDVMGFLRKLPS-PFVMLFDLSATDERMRSHRHDLPDSDFTVFYHLISIDR 108
Query: 84 NRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N L +K+ + EG V +P A+W+EREVWD+ GI F+GHP L RI+ ++GH
Sbjct: 109 NADLMLKVPLKEGDLTLPTVSRHFPNANWYEREVWDLMGINFDGHPHLTRIMMPKSWQGH 168
Query: 143 PLRKDFPVTGFV-------ELHYDDKVKKVVYRP 169
PLRKD+P + D + ++++P
Sbjct: 169 PLRKDYPARATEFDPFMLDAVKQDQEQDNLLFKP 202
>gi|294496247|ref|YP_003542740.1| F420H2 dehydrogenase subunit C [Methanohalophilus mahii DSM 5219]
gi|292667246|gb|ADE37095.1| F420H2 dehydrogenase subunit C [Methanohalophilus mahii DSM 5219]
Length = 163
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + D + + F ++ +S D +V +C +L+ F ++ VD
Sbjct: 9 EKIIDSLSSKFPEAISDTTTESERRISAYADADSIVEVCQYLK--EELEFGHLCSETAVD 66
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
L + N DVVYH S + L +K + + S+V +Y A+W+ERE ++++G+
Sbjct: 67 -LIQKNEIDVVYHIGSYDHPVVLTLKARLPRDNPQIESVVPVYWNANWYERETYELFGVQ 125
Query: 124 FEGHPDLRRILTDYGFEG-HPLRKDF 148
++ HPDLR ++ G PLRKD+
Sbjct: 126 YKNHPDLRNLVLPDELLGDWPLRKDY 151
>gi|333025066|ref|ZP_08453130.1| putative dehydrogenase [Streptomyces sp. Tu6071]
gi|332744918|gb|EGJ75359.1| putative dehydrogenase [Streptomyces sp. Tu6071]
Length = 613
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
F A + G L++DV + R C + L VD F
Sbjct: 163 EEVFGTG-ASAEEAYGLLTVDVPADAWTASLDTARRILGCTY--FDWLSAVDEPGTG--F 217
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H ++ RRL ++ V + S VG+Y GA W ERE +M+G+ FEGHP L
Sbjct: 218 RVCAHVVALAPVRRLLLRTTVPHETPALASAVGVYAGAAWHERETHEMFGLRFEGHPGLT 277
Query: 132 RILTDYGFEGHPLRKDFPVT 151
+L FEGHPLRKDF +
Sbjct: 278 PLLLPETFEGHPLRKDFVLA 297
>gi|195953123|ref|YP_002121413.1| NADH-ubiquinone oxidoreductase chain 49kDa [Hydrogenobaculum sp.
Y04AAS1]
gi|195932735|gb|ACG57435.1| NADH-ubiquinone oxidoreductase chain 49kDa [Hydrogenobaculum sp.
Y04AAS1]
Length = 586
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 21 RFAVNSVGELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ ++V D ++ S+ L+D F ID +DF +RF Y +
Sbjct: 19 ISIDTQPNFVCINVEDNQEITSILKHLKDIED--FRYFIDFHVIDFPKEKDRFLGQYILV 76
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+P RL +K+ +P+ I+ GA W ERE +DM+G+ FEGH D++R+ +
Sbjct: 77 NPYTFERLAIKVWFKSN-KLPTAKEIFAGAKWAEREAYDMFGVEFEGHEDIKRMFMWEDY 135
Query: 140 EGHPLRKDFPVTGFVE 155
+ PLRKDFP+ G E
Sbjct: 136 KYFPLRKDFPLGGIAE 151
>gi|198276153|ref|ZP_03208684.1| hypothetical protein BACPLE_02342 [Bacteroides plebeius DSM 17135]
gi|198270965|gb|EDY95235.1| hypothetical protein BACPLE_02342 [Bacteroides plebeius DSM 17135]
Length = 541
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 13 VNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ + + A S GE + V L + L +D + D+ G+D+
Sbjct: 5 IEKITSIIPEAEISQTGETVVKVPAEKLHQIAETLLNDKENPMDFLRDIVGMDWGE--EG 62
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKS--VPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
+Y S + R+ +K + + +P++ ++ A EREV+D +GI F HPD
Sbjct: 63 LGALYLLESTRTGARITLKAVTTDREKALLPTVSDLWKTALIKEREVYDFFGICFLNHPD 122
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+RRI + G+P+RKD+ + L D++
Sbjct: 123 MRRIFLREDWIGYPMRKDYDMNSNP-LRMDNEE 154
>gi|188528051|ref|YP_001910738.1| NADH dehydrogenase subunit C [Helicobacter pylori Shi470]
gi|188144291|gb|ACD48708.1| NADH dehydrogenase subunit C [Helicobacter pylori Shi470]
Length = 265
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|315587153|gb|ADU41534.1| NADH-quinone oxidoreductase subunit C [Helicobacter pylori 35A]
Length = 265
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCTKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|257453969|ref|ZP_05619245.1| NADH-quinone oxidoreductase subunit c/d [Enhydrobacter aerosaccus
SK60]
gi|257448634|gb|EEV23601.1| NADH-quinone oxidoreductase subunit c/d [Enhydrobacter aerosaccus
SK60]
Length = 594
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ F G ++ V ++ + +LR P +V ++D+ +D R +R
Sbjct: 20 LNRKFEGQFVVQKTFDAFPTIWVSREQVIEVLLYLRTLPQ-PYVMLLDISAIDERLRQHR 78
Query: 72 ------------FDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWD 118
F V YH +S + N +R+K+A+ E +P+ I+P A+W+ERE WD
Sbjct: 79 KDRDGNALPDSDFTVFYHLMSLERNTDIRIKVALKEADLHIPTATRIWPNANWYEREAWD 138
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYR 168
M+GI F+GHP L RIL +EGHPLRK++ Y K ++
Sbjct: 139 MFGITFDGHPHLTRILLPKYWEGHPLRKEYASRATEVPPYYLDKGKQMFE 188
>gi|317130742|ref|YP_004097024.1| NADH (or F420H2) dehydrogenase, subunit C [Bacillus
cellulosilyticus DSM 2522]
gi|315475690|gb|ADU32293.1| NADH (or F420H2) dehydrogenase, subunit C [Bacillus
cellulosilyticus DSM 2522]
Length = 179
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 26 SVGELSLDVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYN 84
+ + + + LRDDP F + + GVD+ +VVY+F S
Sbjct: 48 NFDRPMIILTSEQWKENVAKALRDDPELQFDFLSCVTGVDY---DEHMEVVYNFYSTTKK 104
Query: 85 RRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
L VK+ + V S+ I+ AD+ ERE++D+ GI F GH +L+RIL +EGHP
Sbjct: 105 HYLYVKVRTSRENPSVISVDSIWKAADYMEREIYDLLGIDFPGHWNLKRILLQDEWEGHP 164
Query: 144 LRKDF 148
LRKD+
Sbjct: 165 LRKDY 169
>gi|240102117|ref|YP_002958425.1| formate hydrogenlyase II subunit F (Mhy2F) [Thermococcus
gammatolerans EJ3]
gi|239909670|gb|ACS32561.1| formate hydrogenlyase II subunit F (Mhy2F) [Thermococcus
gammatolerans EJ3]
Length = 578
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + ++ F + N+ + +++ DL + ++ + P + + G D
Sbjct: 17 ERYVNEVIERFRDRIIRIERNADNQWIIEIRKEDLPEVIGYIINHPEWKETQLSTMVGAD 76
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAV---AEGKSVPSIVGIYPGADWFEREVWDMYG 121
+F ++Y + + I + PS+ I+PGA+W+EREV D+ G
Sbjct: 77 ERPLRGKFSLIYWISINGASGDVVFGIKTYISEDDPKFPSVTPIHPGANWYEREVKDLLG 136
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVELHYDDKVKKVVYRP 169
+ EGHPD RR++ + +PLRKDF T + + D+ K P
Sbjct: 137 LIPEGHPDPRRLVLPDDWPEGVYPLRKDFHYTDSPKREFTDETKYPYREP 186
>gi|291303413|ref|YP_003514691.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Stackebrandtia
nassauensis DSM 44728]
gi|290572633|gb|ADD45598.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Stackebrandtia
nassauensis DSM 44728]
Length = 206
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 10 DYIVNSFSGSVRFAVNSVGEL--SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ I + + S E ++ V G + RD F + +
Sbjct: 4 EDIAAALPDA----EVSADEPRPTVTVAPGGWHAAVLTARDRLGLDFFDWLSAVD----E 55
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ VV H S R + V +V SIV +YPGA W ERE +M+G+ F GH
Sbjct: 56 GEGAYRVVTHLWSIAGR-RGLLLNTVTSSGAVDSIVDVYPGASWHERETHEMFGLDFGGH 114
Query: 128 PDLRRILTDYGFEGHPLRKDFPVT 151
PDL +L FEGHPLRKDF +
Sbjct: 115 PDLAPLLLAPEFEGHPLRKDFVLA 138
>gi|192293102|ref|YP_001993707.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodopseudomonas palustris TIE-1]
gi|218528058|sp|B3Q6T3|NUOCD_RHOPT RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|192286851|gb|ACF03232.1| NADH dehydrogenase I, D subunit [Rhodopseudomonas palustris TIE-1]
Length = 581
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +L + F +V + ++ + + + FLR + F ++D
Sbjct: 1 MSAS--ELVTELSTRFKDAVLSEQMTADRFPTVWIRPDATIDVHRFLRQEIDRPFRMLVD 58
Query: 60 LCGVDFLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADW 111
L +D +R +R + H +S + N +R+KIA+ SI ++P A W
Sbjct: 59 LWAIDETARKHRDGLPPSGITIASHLMSHERNADIRIKIALDAEYPRAKSIGSVFPNAPW 118
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ERE +DM+G+ FE P RIL G+EGHP+RK P
Sbjct: 119 YEREAYDMFGVEFEAQPHSLRILLPPGWEGHPMRKTQP 156
>gi|309792515|ref|ZP_07686979.1| NADH (or F420H2) dehydrogenase, subunit C [Oscillochloris
trichoides DG6]
gi|308225503|gb|EFO79267.1| NADH (or F420H2) dehydrogenase, subunit C [Oscillochloris
trichoides DG6]
Length = 171
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ V+ L+ +LRD + + D+ VD+L+ + V +
Sbjct: 45 VLVEPTRLLDAALYLRD--QVGYTYLSDIAVVDYLTDNLLEVVYRFYHLDGGPSLALKVR 102
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
E +PS+ +PGA++ ERE +D+YG+ F GHP LRRI FEG P+RKDFP
Sbjct: 103 LSRENPELPSLTPHWPGANFHEREAYDLYGVVFTGHPFLRRIYMWDEFEGFPMRKDFPKQ 162
Query: 152 G 152
G
Sbjct: 163 G 163
>gi|256390057|ref|YP_003111621.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Catenulispora
acidiphila DSM 44928]
gi|256356283|gb|ACU69780.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Catenulispora
acidiphila DSM 44928]
Length = 213
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLS 80
+ GE ++ V GD ++ + L VD + + F V +
Sbjct: 9 DVQETFGERTVTVASGDWLATLERAH---GLGYTFFDWLTAVDEEAAGFDVFAHVAKIVG 65
Query: 81 PKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ RL ++ + + K +PS V IY GA+W ERE ++M+GI F HP+L +L GF
Sbjct: 66 DERATRLLIRTRIPKDKPELPSAVPIYRGANWHERETFEMFGITFANHPNLIPLLLPDGF 125
Query: 140 EGHPLRKDFPVT 151
+GHPLRKDF +
Sbjct: 126 DGHPLRKDFVLA 137
>gi|85059577|ref|YP_455279.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Sodalis
glossinidius str. 'morsitans']
gi|123519201|sp|Q2NSK1|NUOCD_SODGM RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|84780097|dbj|BAE74874.1| NADH dehydrogenase I subunit C/D [Sodalis glossinidius str.
'morsitans']
Length = 599
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Query: 17 SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----- 71
+ G + V ++ + +FL+ P +V + DL GVD R++R
Sbjct: 34 PDAFSVQPTRTGIPVVWVKREQILKVLTFLKKLPK-PYVMLYDLHGVDERLRTHRQGLPA 92
Query: 72 --FDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
F V YH +S NR + +K+A++E +P+ I+P A+W+ERE W+M+G+ F+GH
Sbjct: 93 ADFTVFYHLISIDRNRDIMLKVALSENDLHLPTCTRIFPNANWYERETWEMFGMTFDGHT 152
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
L RI+ +EGHPLRKD+P
Sbjct: 153 HLTRIMMPKSWEGHPLRKDYP 173
>gi|229014466|ref|ZP_04171584.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus mycoides DSM
2048]
gi|228746816|gb|EEL96701.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus mycoides DSM
2048]
Length = 149
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY 83
S +L + + +R F + +L DF++ V H S
Sbjct: 20 KLSKDVPTLVAEPSKYYEVMELMRFHEGLAFDYMSELHATDFVTHME---VYVHLFSYGK 76
Query: 84 NRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+ + VK+ + V S+ ++ GADW ERE +D+ GI FEGHP+L RIL + G+
Sbjct: 77 KQSVAVKVKLDREAPQVKSVTPLWKGADWPERETYDLLGIVFEGHPNLSRILMPDDWVGY 136
Query: 143 PLRKDF 148
PLRKD+
Sbjct: 137 PLRKDY 142
>gi|167044397|gb|ABZ09074.1| putative Respiratory-chain NADH dehydrogenase, 30 Kd subunit
[uncultured marine crenarchaeote HF4000_APKG6D3]
Length = 180
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ L D I FS V A + ++V +++++ SF+RD F + + GVD+
Sbjct: 23 KSLSDSISKKFSN-VEIAYVKPDRIRVNVKKEEIIAVASFIRD--ELHFDHAESVGGVDY 79
Query: 66 LSRSNRFDVVYHFLSPKYN-------------RRLRVKIAVAEGKSVPSIVGIYPGADWF 112
+ +VVYH S R V + +PS+ I+P +
Sbjct: 80 PE-DKQIEVVYHLGSYTDPSLSKHILALATRAPREDVPRPGNDSTILPSLRDIFPSVSFH 138
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTG 152
ERE ++M G++F+GHPD RR+L + PLRKDF + G
Sbjct: 139 ERECFEMLGVYFDGHPDNRRLLLPEDWADIPPLRKDFRIKG 179
>gi|318080915|ref|ZP_07988247.1| dehydrogenase [Streptomyces sp. SA3_actF]
Length = 162
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
F A + G L++DV + R C + L VD F
Sbjct: 10 EEVFGTG-ASAEEAYGLLTVDVPADTWTASLDTARRVLGCTY--FDWLSAVDEPGTG--F 64
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H ++ RRL ++ V + S VG+Y GA W ERE +M+G+ FEGHP L
Sbjct: 65 RVCAHVVALAPVRRLLLRTTVPHETPALASAVGVYAGAAWHERETHEMFGLRFEGHPGLT 124
Query: 132 RILTDYGFEGHPLRKDFPVT 151
+L FEGHPLRKDF +
Sbjct: 125 PLLLPETFEGHPLRKDFVLA 144
>gi|318056638|ref|ZP_07975361.1| dehydrogenase [Streptomyces sp. SA3_actG]
Length = 374
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
F A + G L++DV + R C + L VD F
Sbjct: 10 EEVFGTG-ASAEEAYGLLTVDVPADTWTASLDTARRVLGCTY--FDWLSAVDEPGTG--F 64
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H ++ RRL ++ V + S VG+Y GA W ERE +M+G+ FEGHP L
Sbjct: 65 RVCAHVVALAPVRRLLLRTTVPHETPALASAVGVYAGAAWHERETHEMFGLRFEGHPGLT 124
Query: 132 RILTDYGFEGHPLRKDFPVT 151
+L FEGHPLRKDF +
Sbjct: 125 PLLLPETFEGHPLRKDFVLA 144
>gi|302521252|ref|ZP_07273594.1| dehydrogenase [Streptomyces sp. SPB78]
gi|302430147|gb|EFL01963.1| dehydrogenase [Streptomyces sp. SPB78]
Length = 374
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
F A + G L++DV + R C + L VD F
Sbjct: 10 EEVFGTG-ASAEEAYGLLTVDVPADTWTASLDTARRVLGCTY--FDWLSAVDEPGTG--F 64
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H ++ RRL ++ V + S VG+Y GA W ERE +M+G+ FEGHP L
Sbjct: 65 RVCAHVVALAPVRRLLLRTTVPHETPALASAVGVYAGAAWHERETHEMFGLRFEGHPGLT 124
Query: 132 RILTDYGFEGHPLRKDFPVT 151
+L FEGHPLRKDF +
Sbjct: 125 PLLLPETFEGHPLRKDFVLA 144
>gi|298674247|ref|YP_003725997.1| NADH (or F420H2) dehydrogenase subunit C [Methanohalobium
evestigatum Z-7303]
gi|298287235|gb|ADI73201.1| NADH (or F420H2) dehydrogenase, subunit C [Methanohalobium
evestigatum Z-7303]
Length = 158
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + D + +F ++ A ++ VD + +C +L++D F ++ GVD
Sbjct: 4 KTIVDSLSRTFPEAISDATVKSDIRVTAYVDKDHVKEVCEYLKND--LDFNHLCCESGVD 61
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
++ N F+VVYH S ++ L +K + + SIV +Y A+W+ERE ++++GI
Sbjct: 62 YI-LRNEFEVVYHIASYEHPVILALKARLNRDDPVIESIVDVYWNANWYERETYELFGIM 120
Query: 124 FEGHPDLRRILTDYGFEG-HPLRKDF 148
F+ HP+L+ ++ G PLRKD+
Sbjct: 121 FKYHPNLKPLVLPEDLLGDWPLRKDY 146
>gi|229170005|ref|ZP_04297698.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH621]
gi|228613523|gb|EEK70655.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH621]
Length = 199
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + + + + + +L + + +R F + +L
Sbjct: 47 LNRYVEVVKERVGEYALVDSYINKLSKDVPTLVAEPSKYYEVMELMRFHEGLAFDYMSEL 106
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 107 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVKSVTPLWKGADWPERETYDL 163
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI FEGHP+L RIL + G+PLRKD+
Sbjct: 164 LGIVFEGHPNLSRILMPDDWVGYPLRKDY 192
>gi|297380442|gb|ADI35329.1| NADH (or F420H2) dehydrogenase, subunit C [Helicobacter pylori
v225d]
gi|332674065|gb|AEE70882.1| NADH-quinone oxidoreductase subunit C/D [Helicobacter pylori 83]
Length = 265
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|261838585|gb|ACX98351.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori 51]
Length = 265
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|20090356|ref|NP_616431.1| NADH dehydrogenase subunit C [Methanosarcina acetivorans C2A]
gi|19915361|gb|AAM04911.1| F(420)H(2) dehydrogenase, subunit FpoC [Methanosarcina acetivorans
C2A]
Length = 158
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 7 DLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F ++ A + D +C +L+D F ++ +CGVD+
Sbjct: 5 TIIESLTGKFPEAISEAEVESPIRIRAYADKEKAKEVCQYLKD--SLQFDHLCSVCGVDY 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFF 124
R+ + VVYH S + L +K + + SIV +Y A+W+ERE ++++GIFF
Sbjct: 63 PQRNEQE-VVYHIASYDHPVVLMLKARLPRDSPEIESIVPVYWNANWYERETYELFGIFF 121
Query: 125 EGHPDLRRILTDYGFEG-HPLRKDF 148
+ HP+L+ ++ G PLRKD+
Sbjct: 122 KNHPNLKALVLPEDMLGEWPLRKDY 146
>gi|207091613|ref|ZP_03239400.1| NADH dehydrogenase subunit C [Helicobacter pylori HPKX_438_AG0C1]
Length = 265
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|317182511|dbj|BAJ60295.1| NADH dehydrogenase subunit C [Helicobacter pylori F57]
Length = 265
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ VD ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAVDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|258647046|ref|ZP_05734515.1| NADH dehydrogenase I, C/D subunit [Prevotella tannerae ATCC 51259]
gi|260853161|gb|EEX73030.1| NADH dehydrogenase I, C/D subunit [Prevotella tannerae ATCC 51259]
Length = 558
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 22 FAVNSVGELSL-DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS 80
+ EL L + DL + L+D+ H F + L G+D+ VVY+ S
Sbjct: 33 ETKPAENELQLHYLAPEDLHAEMQRLKDEEHFDF--LETLTGMDWGEDG--LGVVYNLWS 88
Query: 81 PKYNRRLRVKIAV--AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
N+R+ +K A E +P++ ++ A+ +EREV+D +GI F GHPD+RRI
Sbjct: 89 TTQNKRISLKTATTDRENPFLPTVSDLWNIANIYEREVFDFFGIKFLGHPDMRRIFLRED 148
Query: 139 FEGHPLRKD 147
+ G+P+RKD
Sbjct: 149 WNGYPMRKD 157
>gi|39937322|ref|NP_949598.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodopseudomonas palustris CGA009]
gi|81619356|sp|Q6N1Z0|NUOCD_RHOPA RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|39651180|emb|CAE29703.1| NADH-ubiquinone dehydrogenase chain C,D [Rhodopseudomonas palustris
CGA009]
Length = 581
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+L + F +V + ++ + + + FLR + F ++DL +D
Sbjct: 5 ELVTELSARFKDAVLGEQMTADRFPTVWIRPDATIDVHRFLRQEIDRPFKMLVDLWAIDE 64
Query: 66 LSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVW 117
+R +R + H +S + N +R+KIA+ SI ++P A W+ERE +
Sbjct: 65 TARKHRDGLPPSGITIASHLMSHERNADIRIKIALDAEYPRAKSIGSVFPNAPWYEREAY 124
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
DM+G+ FE P RIL G+EGHP+RK P
Sbjct: 125 DMFGVEFEAQPHSLRILLPPGWEGHPMRKTQP 156
>gi|16082010|ref|NP_394428.1| NADH dehydrogenase subunit C [Thermoplasma acidophilum DSM 1728]
gi|10640283|emb|CAC12097.1| NADH dehydrogenase, chain C related protein [Thermoplasma
acidophilum]
Length = 150
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
+ G + V +L+ L L+ N+ VD+ + +VVYH
Sbjct: 2 DIIAEEKTKDGRKVIRVAKENLLDLMKELKS----QGYNLSLTTAVDY---VDHIEVVYH 54
Query: 78 FLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+ + N + VK + S+ ++ A+W ERE +D+ G+ F+GHP+L+R+
Sbjct: 55 LYNMQKNEYIIVKTETRDNHVP-SLTSLWNAANWDEREEYDLVGVIFDGHPNLKRLFLPE 113
Query: 138 GFEGHPLRKDFPVTGFVELHYDDK 161
G+ GHPLRK++ ++ ++ D++
Sbjct: 114 GWVGHPLRKNYDLSKAQYVNMDEE 137
>gi|308062546|gb|ADO04434.1| NADH dehydrogenase subunit C [Helicobacter pylori Cuz20]
gi|308064040|gb|ADO05927.1| NADH dehydrogenase subunit C [Helicobacter pylori Sat464]
Length = 265
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIAFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|148657100|ref|YP_001277305.1| NADH (or F420H2) dehydrogenase subunit C [Roseiflexus sp. RS-1]
gi|148569210|gb|ABQ91355.1| NADH (or F420H2) dehydrogenase, subunit C [Roseiflexus sp. RS-1]
Length = 168
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
V L + ++RD + + ++ VD+L+ V + F +
Sbjct: 42 VVYPERLPEVARYVRDV--LGYELLSNITAVDYLADGVIEMVYHFFHLDGGPALVIKTRV 99
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+ VPS+ +PGA+ ERE +D++G+ F GHP+L RI FEG P+RKDFP G
Sbjct: 100 PRDHPVVPSLTDEWPGANLQEREAFDLFGVVFTGHPNLTRIYMWDEFEGWPMRKDFPKQG 159
>gi|308185010|ref|YP_003929143.1| NADH dehydrogenase subunit C [Helicobacter pylori SJM180]
gi|308060930|gb|ADO02826.1| NADH dehydrogenase subunit C [Helicobacter pylori SJM180]
Length = 265
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|302543405|ref|ZP_07295747.1| putative NADH dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
gi|302461023|gb|EFL24116.1| putative NADH dehydrogenase [Streptomyces himastatinicus ATCC
53653]
Length = 266
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR--L 87
L++DV ++ RD C + L VD R V ++P R L
Sbjct: 53 LTVDVPADAWITALETARDTLGCTY--FDWLSAVDEPGEGFRVAVHVVAVTPGAAIRRLL 110
Query: 88 RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
++P+ VG+Y GA W ERE +M+GI F GHP L +L FEGHPLRKD
Sbjct: 111 VRTTVPHAAATLPTAVGVYAGAAWHERETHEMFGIAFSGHPGLAPLLLPDNFEGHPLRKD 170
Query: 148 FPVT 151
F +
Sbjct: 171 FVLA 174
>gi|15612248|ref|NP_223901.1| NADH dehydrogenase subunit C [Helicobacter pylori J99]
gi|4155793|gb|AAD06769.1| NADH oxidoreductase I [Helicobacter pylori J99]
Length = 265
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + L+ + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATILKH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|325996537|gb|ADZ51942.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori 2018]
Length = 265
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|317180988|dbj|BAJ58774.1| NADH dehydrogenase subunit C [Helicobacter pylori F32]
Length = 265
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ VD ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATILRH---LGYECLSEMSAVDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|307637934|gb|ADN80384.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori 908]
gi|325998126|gb|ADZ50334.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori 2017]
Length = 265
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|15645876|ref|NP_208054.1| NADH dehydrogenase subunit C [Helicobacter pylori 26695]
gi|2314429|gb|AAD08308.1| NADH-ubiquinone oxidoreductase, NQO5 subunit (NQO5) [Helicobacter
pylori 26695]
Length = 266
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 51 ILDKYIETNTAVFWIKKDDIFSVATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 107
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 108 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 167
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 168 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 195
>gi|163942986|ref|YP_001647870.1| NADH dehydrogenase subunit C [Bacillus weihenstephanensis KBAB4]
gi|163865183|gb|ABY46242.1| NADH (or F420H2) dehydrogenase, subunit C [Bacillus
weihenstephanensis KBAB4]
Length = 485
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + + + + + +L + + +R F + +L
Sbjct: 333 LNRYVEVVKERLGEYALVDSYINKLSKDVPTLVAEPSKYYEVMELMRLHEGLAFDYMSEL 392
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 393 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVKSVTPLWKGADWPERETYDL 449
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI FEGHP+L RIL + G+PLRKD+
Sbjct: 450 LGIVFEGHPNLSRILMPDDWVGYPLRKDY 478
>gi|189459783|ref|ZP_03008568.1| hypothetical protein BACCOP_00412 [Bacteroides coprocola DSM 17136]
gi|189433512|gb|EDV02497.1| hypothetical protein BACCOP_00412 [Bacteroides coprocola DSM 17136]
Length = 540
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
++ + I G + G+ + + + LR+D + D+ G+D+
Sbjct: 2 NITEKISRLVPG---ITITEQGDQVISIPAESFHQIAETLRNDQDEPMDFLRDIVGMDWQ 58
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAV--AEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+Y+ S K R+ +K + E +PS+ ++ A+ EREV+D +GI F
Sbjct: 59 EGG--LGALYYLESSKTYNRIVLKTSTTDRENPYLPSVCDLWKTAEIKEREVFDFFGIRF 116
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPV 150
+PD+RR+ ++G+PLRKD+ +
Sbjct: 117 LNNPDMRRLFLREDWKGYPLRKDYDM 142
>gi|308183372|ref|YP_003927499.1| NADH dehydrogenase subunit C [Helicobacter pylori PeCan4]
gi|308065557|gb|ADO07449.1| NADH dehydrogenase subunit C [Helicobacter pylori PeCan4]
Length = 265
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNAAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|317178005|dbj|BAJ55794.1| NADH dehydrogenase subunit C [Helicobacter pylori F16]
Length = 265
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ VD ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAVDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|310820740|ref|YP_003953098.1| NADH-quinone oxidoreductase [Stigmatella aurantiaca DW4/3-1]
gi|309393812|gb|ADO71271.1| NADH-quinone oxidoreductase [Stigmatella aurantiaca DW4/3-1]
Length = 138
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFL---SRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKS 98
+FL++DP F + GVD L RF+VVY S N +R+K+ V
Sbjct: 2 VAFLKNDPELNFKLFVSADGVDRLHLAENDPRFEVVYFLRSLTLNEHVRLKVRVTETNPE 61
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
VPS+V ++ GA+W+ER VWD YGI F GHPDLRRIL F+GHPLRKD+ +
Sbjct: 62 VPSLVPLFKGANWWERFVWDFYGIRFTGHPDLRRILMYEEFQGHPLRKDYALR 114
>gi|15806516|ref|NP_295227.1| NADH dehydrogenase I subunit C [Deinococcus radiodurans R1]
gi|81789324|sp|Q9RU88|NUOC_DEIRA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|6459266|gb|AAF11071.1|AE001994_7 NADH dehydrogenase I, C subunit [Deinococcus radiodurans R1]
Length = 224
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 8/126 (6%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL----SRSNRFDVVYHFLSPKYN 84
+ + V+ G+L+ LR ++D+ GVD+ R F V+Y P+ +
Sbjct: 46 QPTAAVEAGELLHTAQQLR----ARGFMLLDVIGVDYSRYTAPRPQPFAVLYSVAHPRDH 101
Query: 85 RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RRL +++ ++EG++V S+ I+ A++ EREV+D+ GI F GHPDLR++LT EGHPL
Sbjct: 102 RRLFLRVWLSEGEAVDSLFPIWKAANYLEREVYDLLGIEFTGHPDLRKVLTPDDLEGHPL 161
Query: 145 RKDFPV 150
RKDFP+
Sbjct: 162 RKDFPL 167
>gi|297585415|ref|YP_003701195.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Bacillus
selenitireducens MLS10]
gi|297143872|gb|ADI00630.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Bacillus
selenitireducens MLS10]
Length = 159
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 1 MVRKIEDLGD-YIVNSFS-GSVRFAVNSVGELSLDVDCGDL-VSLCSFLRDDPHCCFVNI 57
M ++ +L I +++ A + + + +D + L DD F +
Sbjct: 1 MNEELLELIQTKIKAIEGEDAIKEAKMNFDKPMVILDTAHWNEDVMRMLHDDEQMQFDFL 60
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREV 116
+ GVD+ + VY+F S ++ L VK+ V S ++ AD+ ERE+
Sbjct: 61 TCVTGVDY---EEHMEAVYNFHSTPLDQYLYVKVVTPRENPVVHSGDPVWKSADYMEREI 117
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
WD+ GI FEGH ++ RIL +EGHPLRKD+
Sbjct: 118 WDLLGIHFEGHWNMSRILLQDDWEGHPLRKDY 149
>gi|311896698|dbj|BAJ29106.1| putative NADH dehydrogenase [Kitasatospora setae KM-6054]
Length = 367
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD-VVYHFLS 80
A + L++DV + + RD F + L VD L R +
Sbjct: 37 SATEAYDLLTVDVPAEHWIEALTAARDALGLAF--LDWLSAVDDLERGFAVCAHLAAVGG 94
Query: 81 PKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
P RRL ++ + K+ VG+Y GA W ERE +M+GI F GHP +L GF
Sbjct: 95 PGGVRRLLLRTRIPREKAALPTAVGVYAGAAWHERETLEMFGIEFPGHPHPVTLLLPDGF 154
Query: 140 EGHPLRKDFPVT 151
EGHPLRKDF +
Sbjct: 155 EGHPLRKDFVLA 166
>gi|229063948|ref|ZP_04200247.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH603]
gi|228716354|gb|EEL68064.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH603]
Length = 149
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY 83
S +L + + +R F + +L DF++ V H S
Sbjct: 20 KLSKDVPTLVAEPSKYYEVMELMRLHEGLAFDYMSELHATDFVTHME---VYVHLFSYGK 76
Query: 84 NRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+ + VK+ + V S+ ++ GADW ERE +D+ GI FEGHP+L RIL + G+
Sbjct: 77 KQSVAVKVKLDREAPQVKSVTPLWKGADWPEREAYDLLGIVFEGHPNLSRILMPDDWVGY 136
Query: 143 PLRKDF 148
PLRKD+
Sbjct: 137 PLRKDY 142
>gi|317014654|gb|ADU82090.1| NADH dehydrogenase subunit C [Helicobacter pylori Gambia94/24]
Length = 265
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|109946843|ref|YP_664071.1| NADH dehydrogenase subunit C [Helicobacter acinonychis str. Sheeba]
gi|109714064|emb|CAJ99072.1| NADH dehydrogenase I chain C [Helicobacter acinonychis str. Sheeba]
Length = 265
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + ++ ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKEDIFSIATILRH---LGYESLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+R+K + +SV S+ +Y A+W ERE +DM+GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRIKCVLLPNESVDSLSFLYRSANWSEREAYDMFGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|218295762|ref|ZP_03496558.1| NADH (or F420H2) dehydrogenase, subunit C [Thermus aquaticus
Y51MC23]
gi|218243921|gb|EED10448.1| NADH (or F420H2) dehydrogenase, subunit C [Thermus aquaticus
Y51MC23]
Length = 206
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + + + N +G L + + + + RD F + D+ G+D+L+
Sbjct: 3 LSRVLEEARAKGYPVEDNGLGNLWVVLPREGFKAAMAHYRD---LGFNYLADIVGLDYLT 59
Query: 68 RSN---------RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVW 117
+ V R V++ V E + ++ A++ EREV+
Sbjct: 60 YPDPKPERFAVVYELVSLPGWKDGDGSRFFVRVYVPEKDPRLPTVTDLWGSANFLEREVY 119
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV----TGFVELHY 158
D++GI FEGHPDLR+ILT EGHPLRKDFP+ T F E Y
Sbjct: 120 DLFGIVFEGHPDLRKILTPEDLEGHPLRKDFPLGETPTLFREGRY 164
>gi|317011462|gb|ADU85209.1| NADH dehydrogenase subunit C [Helicobacter pylori SouthAfrica7]
Length = 265
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + ++ ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKEDIFSVATILRH---LGYESLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCTLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|302536204|ref|ZP_07288546.1| predicted protein [Streptomyces sp. C]
gi|302445099|gb|EFL16915.1| predicted protein [Streptomyces sp. C]
Length = 452
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
L++DV G +S RD C + L VD R L RRL +
Sbjct: 80 LTVDVPVGSWISALEIARDKLGCTY--FDWLSAVDEPGTGFRVCAHVVSLENHRVRRLLL 137
Query: 90 KIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ V V +Y GA W ERE ++M+G+ F HP+L +L FEGHPLRKDF
Sbjct: 138 RTTVPHSAPSLPSAVAVYAGAAWHERETFEMFGVTFTDHPNLVHLLLPENFEGHPLRKDF 197
Query: 149 PVT 151
+
Sbjct: 198 VLA 200
>gi|225874131|ref|YP_002755590.1| NADH dehydrogenase domain protein [Acidobacterium capsulatum ATCC
51196]
gi|225793906|gb|ACO33996.1| NADH dehydrogenase domain protein [Acidobacterium capsulatum ATCC
51196]
Length = 206
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 73/183 (39%), Gaps = 42/183 (22%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG----ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
E L + ++ G + V G + SL +D V +LRD D+
Sbjct: 13 EALRAALESAIPGC-QITVVPKGSPSAQHSLVLDRAYAVEAARYLRDHADYRLDYCSDVA 71
Query: 62 GVDFLSRSNRFDVV-------------------------------YHFLSPKYNR----- 85
GVD+L + V YH S +
Sbjct: 72 GVDWLDAEKKETVKVTKTVETPEGPAEQQVDETRTTLIPGYLEAVYHLYSVEKKHGPVVL 131
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
RLR A VPS+ I+ A++ ERE +D+YGI F+GHPDLRRIL F +P+R
Sbjct: 132 RLRTADRAA-NTHVPSLTPIWRSAEFQEREAFDLYGIVFDGHPDLRRILMWDNFTDYPMR 190
Query: 146 KDF 148
KD+
Sbjct: 191 KDY 193
>gi|220909536|ref|YP_002484847.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 7425]
gi|219866147|gb|ACL46486.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Cyanothece sp. PCC
7425]
Length = 168
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L VD L+ + L F + G D + V + S ++ +
Sbjct: 38 ILKVDRDVLIPVSMAL---YAYGFNYLQCQAGYDAGPGQDLVSVYHLIKLTDSAEHPDEV 94
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
RVK+ + + I+ ADW ERE +DMYGI FEGHP+L+R+L + G PLRK
Sbjct: 95 RVKVFLPRQDPRVPSVYWIWKTADWQERETYDMYGIVFEGHPNLKRLLMPEDWVGWPLRK 154
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 155 DYISPDFYELQ 165
>gi|52550303|gb|AAU84152.1| F420H2 dehydrogenase subunit C [uncultured archaeon GZfos37B2]
Length = 188
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGD---LVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
D + + F +V A+ + D +V +CS+L+D+ F + + +DF
Sbjct: 8 DSLKSQFPDAVTDALIDSQPPHIVCANADKGRIVDICSYLKDN--LQFNRLSGITSLDFP 65
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--PSIVGIYPGADWFEREVWDMYGIFF 124
F+V Y S ++ +++K AV +S +++ ++ A+W+EREV++ GI+F
Sbjct: 66 EYGK-FEVAYMIASYDHSVIVKLKAAVPRDESPSIDTVIPVWWNANWYEREVYEFMGIYF 124
Query: 125 EGHPDLRRILTDYGFEG-HPLRKDFPVTGFVELH--YDDKVKKVVYRPVELM 173
+GHP+L ++ G +PLRKD+P Y D + +V L
Sbjct: 125 DGHPELTPLVLSDDMVGEYPLRKDYPDYPQTTAKYPYSDDQESIVEENYPLE 176
>gi|295837077|ref|ZP_06824010.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826350|gb|EDY44117.2| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 474
Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
F A + G L++DV + R C + L VD
Sbjct: 10 EEVFGTG-ANAEEAYGLLTVDVPADTWTASLDTARRVLGCTY--FDWLSAVDEPGTG--L 64
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H ++ RRL ++ V G V S VG+Y GA W ERE +M+G+ FEGHP L
Sbjct: 65 RVCAHVVALAPVRRLLLRTTVPHGTPVLASAVGVYAGAAWHERETHEMFGLRFEGHPGLA 124
Query: 132 RILTDYGFEGHPLRKDFPVT 151
+L FEGHPLRKDF +
Sbjct: 125 PLLLPETFEGHPLRKDFVLA 144
>gi|291451957|ref|ZP_06591347.1| predicted protein [Streptomyces albus J1074]
gi|291354906|gb|EFE81808.1| predicted protein [Streptomyces albus J1074]
Length = 503
Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A S L++DV S R C F L VD F V H ++
Sbjct: 81 AEESYDVLTVDVPAASWTSALGTARSALGCTF--FDWLSAVDEPGTG--FLVSAHLVALA 136
Query: 83 YNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RRL ++ V V S V ++ GA W ERE +M+G+ F GHP L +L FEG
Sbjct: 137 PVRRLLLRTTVPHEAPVLESAVEVFAGAAWHERETHEMFGVSFTGHPALDPLLLPENFEG 196
Query: 142 HPLRKDFPVT 151
HPLRKDF +
Sbjct: 197 HPLRKDFVLA 206
>gi|239980103|ref|ZP_04702627.1| NADH dehydrogenase [Streptomyces albus J1074]
Length = 441
Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A S L++DV S R C F L VD F V H ++
Sbjct: 19 AEESYDVLTVDVPAASWTSALGTARSALGCTF--FDWLSAVDEPGTG--FLVSAHLVALA 74
Query: 83 YNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RRL ++ V V S V ++ GA W ERE +M+G+ F GHP L +L FEG
Sbjct: 75 PVRRLLLRTTVPHEAPVLESAVEVFAGAAWHERETHEMFGVSFTGHPALDPLLLPENFEG 134
Query: 142 HPLRKDFPVT 151
HPLRKDF +
Sbjct: 135 HPLRKDFVLA 144
>gi|229020516|ref|ZP_04177263.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH1273]
gi|229026734|ref|ZP_04183070.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH1272]
gi|228734565|gb|EEL85223.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH1272]
gi|228740787|gb|EEL91038.1| NADH (Or F420H2) dehydrogenase, subunit C [Bacillus cereus AH1273]
Length = 445
Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGS-VRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + + + + + +L + + +R F + +L
Sbjct: 293 LNQYVEVVKEKLGEYALVDSYINKLSKDVPTLVAEPSKYYEVMELMRLHEGLAFDYMSEL 352
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
DF++ V H S + + VK+ + V S+ ++ GADW ERE +D+
Sbjct: 353 HATDFVTHME---VYVHLFSYGKKQSVAVKVKLDREAPQVESVTPLWKGADWPEREAYDL 409
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP+L RIL + G+PLRKD+
Sbjct: 410 LGIVFKGHPNLSRILMPDDWVGYPLRKDY 438
>gi|156742065|ref|YP_001432194.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Roseiflexus
castenholzii DSM 13941]
gi|156233393|gb|ABU58176.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Roseiflexus
castenholzii DSM 13941]
Length = 189
Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
V L + ++RD + + ++ VD+L V + F +
Sbjct: 63 VVYPDRLPEVARYVRDV--LGYQLLSNITAVDYLVDGVIEMVYHFFHLDGGPELVIKTRV 120
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+ VPS+ +PGA+ ERE +D++G+ F GHP+L RI FEG P+RKDFP G
Sbjct: 121 PRDNPVVPSLTDEWPGANLQEREAFDLFGVVFPGHPNLTRIYMWDEFEGWPMRKDFPKQG 180
>gi|162148252|ref|YP_001602713.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Gluconacetobacter diazotrophicus PAl 5]
gi|209542892|ref|YP_002275121.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Gluconacetobacter diazotrophicus PAl 5]
gi|221272395|sp|A9HN95|NUOCD_GLUDA RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|161786829|emb|CAP56412.1| putative ADH-quinone oxidoreductase chain C/D [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530569|gb|ACI50506.1| NADH dehydrogenase I, D subunit [Gluconacetobacter diazotrophicus
PAl 5]
Length = 601
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGEL-SLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M ++ DLG G+V + + + + L ++ LR +P + D
Sbjct: 26 MFGQVSDLG-------PGTVLAVETARDGVPTAWIAPTSLRAVVGMLR-EPAAALRMLFD 77
Query: 60 LCGVDFLSRSNRFD--------VVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGAD 110
L +D R++R V + LR+K+ + I +P A+
Sbjct: 78 LTAIDERQRAHRVGQPDCAFTLVCHFMALGGAGDALRLKVPLPAEAPRVPSIADFWPNAN 137
Query: 111 WFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
W+EREVWD++GI FEGHP LRRILT + GHPLRKD
Sbjct: 138 WYEREVWDLFGITFEGHPFLRRILTPPTWTGHPLRKDH 175
>gi|317178444|dbj|BAJ56232.1| NADH dehydrogenase subunit C [Helicobacter pylori F30]
Length = 265
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S + LR + + ++ VD ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSAATTLRH---LGYECLSEMSAVDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|289811569|ref|ZP_06542198.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 196
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|304437257|ref|ZP_07397217.1| NADH-quinone oxidoreductase subunit C [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304369749|gb|EFM23414.1| NADH-quinone oxidoreductase subunit C [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 157
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ + +FS + +L + +L+ L LRDD + ++ VD
Sbjct: 7 EALKVAFSSA--EYDVEAERPALYIAAEELLGLLRVLRDDGTLQLTRLENVTAVD---WK 61
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHP 128
+RF++VYH SP L +K+ + V + ++PGA++ EREV+D+ GI F GHP
Sbjct: 62 DRFEMVYHLFSPTELHWLTLKVTLPHDVPVLPSVTPVFPGAEFEEREVYDLMGIVFTGHP 121
Query: 129 DLRRILTDYGFEGHPLRKDF 148
+LRR+ F G+PLRKDF
Sbjct: 122 NLRRVFHADDFVGYPLRKDF 141
>gi|218509667|ref|ZP_03507545.1| NADH-ubiquinone oxidoreductase chain C protein [Rhizobium etli
Brasil 5]
Length = 107
Score = 98.1 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 48/73 (65%)
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
R+R+K + + VPS+ G++ A+W ERE WDMYGI F GHPDLRRI GFE
Sbjct: 1 MPNRWRVRIKCRLGDPPEVPSVTGVWRTANWHEREAWDMYGIRFAGHPDLRRIYMWEGFE 60
Query: 141 GHPLRKDFPVTGF 153
G P RKDFP+ G+
Sbjct: 61 GFPQRKDFPLRGY 73
>gi|145298721|ref|YP_001141562.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Aeromonas
salmonicida subsp. salmonicida A449]
gi|218528033|sp|A4SLP2|NUOCD_AERS4 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|142851493|gb|ABO89814.1| NADH dehydrogenase I, C/D subunits [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 601
Score = 98.1 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKY 83
+ + L+ + FLR P FV + DL D RS+R F V YHF+S
Sbjct: 50 VIWLARELLLDVVGFLRKLPS-PFVMLYDLSATDERLRSHRDGLPQSDFTVFYHFISIDR 108
Query: 84 NRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N + +K+ + +P++ G +P A+W+EREVWD+ GI F+GHP L RI+ ++GH
Sbjct: 109 NADVMLKVPLAESDLHLPTLTGHFPNANWYEREVWDLLGITFDGHPHLTRIMMPKSWQGH 168
Query: 143 PLRKDFP 149
PLRKD+P
Sbjct: 169 PLRKDYP 175
>gi|224026050|ref|ZP_03644416.1| hypothetical protein BACCOPRO_02803 [Bacteroides coprophilus DSM
18228]
gi|224019286|gb|EEF77284.1| hypothetical protein BACCOPRO_02803 [Bacteroides coprophilus DSM
18228]
Length = 540
Score = 98.1 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
++ + I G V G+ + V + LR+D + D+ G+D+
Sbjct: 2 NITEKISRLVPG---ITVAETGDQVVTVPVESFRQVAEALRNDKDEPMDFLRDIVGMDWQ 58
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAV--AEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+Y+ S K R+ +K + E +PS+ ++ A+ EREV+D +GI F
Sbjct: 59 EGG--LGALYYLESSKTYNRIVLKTSTTDRENPFLPSVCDLWKTAEIKEREVFDFFGIRF 116
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPV 150
+PD+RR+ + G+PLRKD+ +
Sbjct: 117 LNNPDMRRLFLREDWIGYPLRKDYDM 142
>gi|161527786|ref|YP_001581612.1| NADH dehydrogenase 30 kDa subunit [Nitrosopumilus maritimus SCM1]
gi|160339087|gb|ABX12174.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Nitrosopumilus
maritimus SCM1]
Length = 200
Score = 98.1 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ D +V F + + + + + F+RDD + + + GVD+ +
Sbjct: 44 ISDKLVEKFGDKIEVDFVKEDRVGIKASKESVHDVAQFIRDD--LHYDHAESVSGVDYPA 101
Query: 68 RSNRFDVVYHFLSPKYN-------------RRLRVKIAVAEGKSVPSIVGIYPGADWFER 114
N +VVYH S + R I + +PS+ ++ ++ ER
Sbjct: 102 -DNEIEVVYHLGSYTDSSLARQVLTLSTRAPRESSPIPGQDSTKLPSLRDVFYSVEFGER 160
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTG 152
EV++M G++F+GHPD RR+L + PLRKDF + G
Sbjct: 161 EVFEMLGVYFDGHPDNRRLLLPEDWADLPPLRKDFAIKG 199
>gi|210135421|ref|YP_002301860.1| NADH dehydrogenase subunit C [Helicobacter pylori P12]
gi|210133389|gb|ACJ08380.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori P12]
Length = 265
Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSAATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|213023117|ref|ZP_03337564.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 205
Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 29 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 87
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 88 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 147
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFP 149
EGHP L RI+ +EGHPLRKD+P
Sbjct: 148 DIEGHPHLTRIMMPQTWEGHPLRKDYP 174
>gi|108563631|ref|YP_627947.1| NADH dehydrogenase subunit C [Helicobacter pylori HPAG1]
gi|107837404|gb|ABF85273.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori HPAG1]
Length = 266
Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V V D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 51 VLDKYIETNTAVFWVKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 107
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +D+ GI F+ HP L+R++
Sbjct: 108 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDLLGIVFDKHPYLKRLIM 167
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 168 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 195
>gi|233599|gb|AAB19473.1| 30 kDa-A polypeptide of iron-sulfur protein fraction of
NADH:ubiquinone oxidoreductase [cattle, heart, Peptide
Mitochondrial Partial, 139 aa]
Length = 139
Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 141 GHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLFAKEDSKD 199
GHP RKDFP++G+VEL YDD+VK+VV PVEL QE R +D SPWE + +S+
Sbjct: 1 GHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPAYRQPPESEK 59
>gi|261839980|gb|ACX99745.1| NADH (or F420H2) dehydrogenase, subunit C [Helicobacter pylori 52]
gi|317013050|gb|ADU83658.1| NADH dehydrogenase subunit C [Helicobacter pylori Lithuania75]
Length = 265
Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +D+ GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDLLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|158333361|ref|YP_001514533.1| NADH dehydrogenase subunit J [Acaryochloris marina MBIC11017]
gi|218527793|sp|B0C6C5|NDHJ_ACAM1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|158303602|gb|ABW25219.1| proton-translocating NAD(P)H-quinone oxidoreductase, chain J
[Acaryochloris marina MBIC11017]
Length = 182
Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR---LR 88
+ V LV + + L +D + ++ G D + + R +R
Sbjct: 53 IKVTADQLVDVATTLVND---GYNYLMCQGGYDSGPGQELVSMYHLLKLSDDADRPPEVR 109
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ ++ + ++ +DW ERE +DMYGI +EGHP+L RIL + G PLRKD
Sbjct: 110 IKVFLSREDPRVPSLYWVWKASDWQERESYDMYGIVYEGHPNLTRILMPEDWVGWPLRKD 169
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 170 YISPDFYELQ 179
>gi|289582899|ref|YP_003481365.1| NADH-ubiquinone oxidoreductase chain 49kDa [Natrialba magadii ATCC
43099]
gi|289532452|gb|ADD06803.1| NADH-ubiquinone oxidoreductase chain 49kDa [Natrialba magadii ATCC
43099]
Length = 560
Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 3/154 (1%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
D + + + + ++ D+ S+ S LRD + ++ + + R
Sbjct: 24 EDELESLLGERAIARDDHLNAPGFVINPNDVQSVLSDLRD--EAGYDHLSCVTAQQYEDR 81
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ F P + V V S ++ ADW ERE +D+ GI ++ HP
Sbjct: 82 YESIYHMKKFADPTDEVSIVVPTTVD-DPVSQSAEPVFRTADWHEREAYDLVGIEYDDHP 140
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
DLRRIL ++GHPL KD+ + +
Sbjct: 141 DLRRILLPETWQGHPLSKDYDQEKPQLVTLTEHQ 174
>gi|292655140|ref|YP_003535037.1| NADH dehydrogenase-like complex subunit CD [Haloferax volcanii DS2]
gi|302425122|sp|D4GVF7|NUOCD_HALVD RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|291371958|gb|ADE04185.1| NADH dehydrogenase-like complex subunit CD [Haloferax volcanii DS2]
Length = 557
Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
GD + V + L + ++ LRD F ++ + ++ R
Sbjct: 21 GDELAELLGDLVVGREEHLNAPGLVIRPDEVQDALFKLRD--EAGFDHLSCVTAQEYEDR 78
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ F + V + + S ++ ADW ERE +D+ GI +E HP
Sbjct: 79 YESIYHLTKFDDRTDEVSVVVPTS-KDNPVSQSAEPVFRTADWHEREAYDLVGIQYEDHP 137
Query: 129 DLRRILTDYGFEGHPLRKDFP 149
DLRRIL ++GHPL D+
Sbjct: 138 DLRRILLPETWQGHPLGLDYD 158
>gi|254779805|ref|YP_003057911.1| NADH dehydrogenase subunit C [Helicobacter pylori B38]
gi|254001717|emb|CAX29948.1| NADH-ubiquinone oxidoreductase, NQO5 subunit [Helicobacter pylori
B38]
Length = 265
Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
V + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 VLDKYIETNTAVFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGYFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +D+ GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCILLPNESVDSLSFLYRSANWSEREAYDLLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|208435156|ref|YP_002266822.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori G27]
gi|208433085|gb|ACI27956.1| NADH-ubiquinone oxidoreductase chain C [Helicobacter pylori G27]
Length = 265
Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +D+ GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDLLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|89095635|ref|ZP_01168529.1| NADH dehydrogenase subunit C [Bacillus sp. NRRL B-14911]
gi|89089381|gb|EAR68488.1| NADH dehydrogenase subunit C [Bacillus sp. NRRL B-14911]
Length = 470
Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 5 IEDLGDYIVNSFSGSVRFAV----NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ I G V S +L + FLR + F + +L
Sbjct: 318 LDLYNQVIEEHLGGDVLEDSYINRLSKDVPTLVARQDTYFKIAEFLRYNEQLGFDYLSEL 377
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDM 119
G DF +V H S K + + +K + + S+ ++ GA+W E E +D+
Sbjct: 378 HGTDF---ETHMEVYVHLYSYKNRQTVALKTKIDRSDPAIESLAPLWAGANWPECEAYDL 434
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
GI F+GHP L RI+ + GHPLRKD+
Sbjct: 435 LGISFKGHPGLYRIMLGEEWVGHPLRKDY 463
>gi|219848533|ref|YP_002462966.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Chloroflexus
aggregans DSM 9485]
gi|219542792|gb|ACL24530.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Chloroflexus
aggregans DSM 9485]
Length = 173
Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
V LV F+RD + + D+ VD+L + F++VY F P + +++ V
Sbjct: 49 VRPQRLVDAALFVRD--TLGYAYLSDIAVVDYL-YAGCFEIVYRFYHPAGGSSIVLRVRV 105
Query: 94 AEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+ V + +P A + ERE +D++GI F GHP L RI FEG P+RKDFP G
Sbjct: 106 PRDEPVVPSLTPYWPAAHFHEREAYDLFGIVFTGHPYLHRIYMWDEFEGFPMRKDFPRQG 165
>gi|239929562|ref|ZP_04686515.1| dehydrogenase [Streptomyces ghanaensis ATCC 14672]
gi|291437888|ref|ZP_06577278.1| dehydrogenase [Streptomyces ghanaensis ATCC 14672]
gi|291340783|gb|EFE67739.1| dehydrogenase [Streptomyces ghanaensis ATCC 14672]
Length = 152
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Query: 13 VNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
F A S G L++DV +S RD C F L VD F
Sbjct: 12 EELFGTDAT-AEESYGVLTVDVPPASWISALETARDRVGCTF--FDWLSAVDEPGTG--F 66
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
V H ++ RRL ++ V V +Y GA W ERE +M+GI F GHP L
Sbjct: 67 HVTAHVVALSPVRRLLLRTTVPHEAPTLPSAVDVYAGAAWHERETHEMFGIDFTGHPALE 126
Query: 132 RILTDYGFEGHPL 144
+L GFEGHPL
Sbjct: 127 HLLLPDGFEGHPL 139
>gi|73670848|ref|YP_306863.1| NADH dehydrogenase subunit C [Methanosarcina barkeri str. Fusaro]
gi|72398010|gb|AAZ72283.1| F420H2 dehydrogenase subunit C [Methanosarcina barkeri str. Fusaro]
Length = 158
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 7 DLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
++ + +F ++ S V+ +C +L+D F ++ +CGVD+
Sbjct: 5 EILKSLTGAFPEAISETTAESEIRARAYVEKEKTKEVCQYLKD--SLQFDHLCSVCGVDY 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ R+ V + E + SIV +Y A+W+ERE ++++GI F+
Sbjct: 63 IKRNELEVVYHIASYNHPVVLTLKAKLPRENPEIESIVSVYWNANWYERETYELFGILFK 122
Query: 126 GHPDLRRILTDYGFEG-HPLRKDF 148
HP+L+ ++ G PLRKD+
Sbjct: 123 NHPNLKPLILPEDMLGEWPLRKDY 146
>gi|70608050|ref|YP_256920.1| NADH dehydrogenase subunit C [Sulfolobus acidocaldarius DSM 639]
gi|68568698|gb|AAY81627.1| NADH dehydrogenase I chain C [Sulfolobus acidocaldarius DSM 639]
Length = 164
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + + + F V V ++ VD ++ + ++L+ F ++ +
Sbjct: 5 NDNLAKIIQDLNSKF--KVNGKVEGTNRATIIVDKSQILEIANYLK---QIGFDHVKAVT 59
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAE-----GKSVPSIVGIYPGADWFEREV 116
G+D+ F+VVYH S +V +A+ E PS+ ++ ERE
Sbjct: 60 GIDYPETEE-FEVVYHISSYSDLALAKVIVALREKTSYKDPVFPSLFKVWESVWTGERET 118
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
++M GI FEGHP+LRR+ D FEG +PLRK + +
Sbjct: 119 YEMLGIVFEGHPELRRMFLDEDFEGVYPLRKSYKLK 154
>gi|330830047|ref|YP_004392999.1| NADH-quinone oxidoreductase subunit C/D [Aeromonas veronii B565]
gi|328805183|gb|AEB50382.1| NADH-quinone oxidoreductase subunit C/D [Aeromonas veronii B565]
Length = 601
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKY 83
+ + L + FLR P FV + DL D RS+R F V YH +S +
Sbjct: 50 VVWLPRELLQDVMGFLRKVPS-PFVMLFDLSATDERLRSHRDGLPQSDFTVFYHLISIER 108
Query: 84 NRRLRVKI-AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N + +K+ +P+I +P A+W+EREVWD+ GI F+GHP L RI+ ++GH
Sbjct: 109 NADVMLKVGLAESDLHLPTITNHFPNANWYEREVWDLMGITFDGHPHLTRIMMPKSWQGH 168
Query: 143 PLRKDFP 149
PLRKD+P
Sbjct: 169 PLRKDYP 175
>gi|86748474|ref|YP_484970.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodopseudomonas palustris HaA2]
gi|123408618|sp|Q2J0F1|NUOCD_RHOP2 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|86571502|gb|ABD06059.1| NADH dehydrogenase I, D subunit [Rhodopseudomonas palustris HaA2]
Length = 581
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M DL + F +V + ++ + ++ +L+ + F ++D
Sbjct: 1 MSAT--DLVSELGARFGDAVLGEQTTRERFPTVWIRPEASAAVHRYLKHEVERPFRMLVD 58
Query: 60 LCGVDFLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADW 111
L +D +R +R + H +S + N +R+K+ + SI G+YP A W
Sbjct: 59 LWAIDETARKHREGQPPSGITIASHLMSHERNADIRLKVGLDAEYPSAKSIAGVYPNAAW 118
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ERE +DM+G+ FE P RIL G+EGHP+RK P
Sbjct: 119 YEREAYDMFGVEFEAQPHSLRILLPPGWEGHPMRKTQP 156
>gi|284174512|ref|ZP_06388481.1| NADH dehydrogenase subunit C [Sulfolobus solfataricus 98/2]
gi|261601932|gb|ACX91535.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus solfataricus
98/2]
Length = 164
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLV-SLCSFLRDDPHCCFVNIID 59
M ++ L + + F + + S +++ V ++ + SFL+D F ++
Sbjct: 1 MSEALKSLVNDLQTKF--KCQAKIESDRRITVIVPDKKIIRDVASFLKD---FGFDHVKA 55
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-----EGKSVPSIVGIYPGADWFER 114
+ G+D+ +VVYH S ++ +A+ + S+PS+ I+ A ER
Sbjct: 56 VTGIDYPEHEK-LEVVYHISSYSNLDLAKIILALRTTVSYKDPSLPSLYSIFESAWTGER 114
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
E ++M GI FEGHPDLRR D FEG +PLRK + +
Sbjct: 115 ETYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSYKIK 152
>gi|218660810|ref|ZP_03516740.1| NADH-ubiquinone oxidoreductase chain C protein [Rhizobium etli
IE4771]
Length = 153
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
I+ F ++ + G + V +V C FL++ P F + D+CGVD R
Sbjct: 12 IMERFGETIEDLGTAHGIEAFAVPPERIVEFCRFLKEHPALQFNFLSDVCGVDHYPEMPR 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG----H 127
F+ VYH S R+R+K + + VPS+ G++ A+W ERE WDMYGI G
Sbjct: 72 FEAVYHLYSLANRWRIRIKCRLGDPPEVPSVTGVWRTANWHEREAWDMYGIPVHGTSRSA 131
Query: 128 PDL 130
PDL
Sbjct: 132 PDL 134
>gi|124025085|ref|YP_001014201.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. NATL1A]
gi|218527865|sp|A2C0C6|NDHJ_PROM1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|123960153|gb|ABM74936.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. NATL1A]
Length = 173
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK-------Y 83
+ + +L+S+ L++D F + G D N +
Sbjct: 40 VIKISPNNLLSIVEALKND---GFNYLQCQGGYDEGPGLNIVCFYNLIEMNELKEDISPR 96
Query: 84 NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
RL+V + +VPS+ ++ GADW ERE +DMYG+ F+GHP +R+L ++G P
Sbjct: 97 EVRLKVFLDRNGDLTVPSLYSLFRGADWQERETFDMYGVNFKGHPHPKRLLMPEDWKGWP 156
Query: 144 LRKDFPVTGFVELH 157
LRKD+ F E+
Sbjct: 157 LRKDYVQPDFYEMQ 170
>gi|33860850|ref|NP_892411.1| NADH dehydrogenase subunit J [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|81576413|sp|Q7V304|NDHJ_PROMP RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|33633792|emb|CAE18751.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 176
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 60/151 (39%), Gaps = 15/151 (9%)
Query: 18 GSVRFAVNSVGEL---SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
+ + L V L S LR F + G D
Sbjct: 27 DGITNESLGNDHIGVEILSVKPEKLYEAISTLR---GYGFNYLQCQGGYDE-GPGKCLVS 82
Query: 75 VYHFLSPKYNR--------RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
YH +S + R++V + SVPS+ I+ G+DW ERE +DM+GI F
Sbjct: 83 FYHLISLGDIQDIKEIKEIRVKVFLNRDSDLSVPSLYKIFKGSDWQERETYDMFGINFAD 142
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
HP+ R+L + G PLRKD+ F EL
Sbjct: 143 HPNPTRLLMPEDWRGWPLRKDYIQPDFYELQ 173
>gi|258514492|ref|YP_003190714.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfotomaculum
acetoxidans DSM 771]
gi|257778197|gb|ACV62091.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfotomaculum
acetoxidans DSM 771]
Length = 174
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
++ + I + +V+ + + V L+ LRD+ F + +
Sbjct: 25 AALDRVTAAIEELKGKYPQISVSE--QQIITVPIYILLDFMFDLRDN--YAFDFLTNETA 80
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYG 121
VD+ + +F+V+Y+ S Y+ L VK V +PSI ++ GA+W EREV+D+ G
Sbjct: 81 VDYPDQ-QKFEVIYNLNSTTYHDCLFVKAEVDRENPEIPSIFPVWGGANWQEREVYDLLG 139
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDF 148
I F HP+L+RIL D F+G+PLR+DF
Sbjct: 140 IVFTDHPNLKRILLDDAFDGYPLRRDF 166
>gi|170079341|ref|YP_001735979.1| NADH dehydrogenase subunit J [Synechococcus sp. PCC 7002]
gi|75527212|sp|Q8KX38|NDHJ_SYNP2 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|22652006|gb|AAN03555.1|AF381040_5 NADH dehydrogenase subunit J [Synechococcus sp. PCC 7002]
gi|169887010|gb|ACB00724.1| NADH dehydrogenase subunit J [Synechococcus sp. PCC 7002]
Length = 174
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ VD L+ LC+ L F + D + + +
Sbjct: 44 IIKVDADLLIPLCTAL---YAFGFNYLQCQGAYDLGPGKELVSFYHLLKVGDNVTDPEEV 100
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
RVK+ + V + I+ GADW ERE +DMYGI +EGHP+L+RIL + G PLRK
Sbjct: 101 RVKVFLPRENPVVPSVYWIWKGADWQERESYDMYGIVYEGHPNLKRILMPEDWIGWPLRK 160
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 161 DYVSPDFYELQ 171
>gi|51893913|ref|YP_076604.1| NADH dehydrogenase I subunit C [Symbiobacterium thermophilum IAM
14863]
gi|51857602|dbj|BAD41760.1| NADH dehydrogenase I subunit C [Symbiobacterium thermophilum IAM
14863]
Length = 156
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D++ F + G+ + V + R F + +D+ R
Sbjct: 2 DFLKERFPDAQFETHI-NGDTEILVPADRYEEVV---RACYEAGFTFCSVVTAIDWQDRL 57
Query: 70 NRFDVVYHFLSPKYNRR-LRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ + R + +K+ + +G +PSI +YPGA+W ERE +DMYGI F+GH
Sbjct: 58 TLVTSLARINPDEVGVRNIHIKVDLPRQGAHIPSIANLYPGANWHERETYDMYGIRFDGH 117
Query: 128 PDLRRILTDYGFE-GHPLRKDF 148
P+ RRIL ++ GHPL KDF
Sbjct: 118 PNHRRILLPDNWQGGHPLLKDF 139
>gi|76801791|ref|YP_326799.1| NADH dehydrogenase-like complex, subunit Cd [Natronomonas pharaonis
DSM 2160]
gi|76557656|emb|CAI49239.1| NADH dehydrogenase-like complex, subunit CD [Natronomonas pharaonis
DSM 2160]
Length = 556
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 13/155 (8%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ V V + V ++ + LRD F + ++ ++ R
Sbjct: 23 LEALLGEHVIDREEHVNAPAFVVRPDEVQDVLFALRD--EAGFDYLSNVTAQEYEDRYES 80
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ + P + V + +Y ADW ERE +D+ GI +EGHPD+R
Sbjct: 81 IYHLKKYDDPTQEVGVVVPA-AKGEPVSQTAEPVYRTADWHEREAYDLVGIEYEGHPDMR 139
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV 166
RIL ++GHPL D YD + +VV
Sbjct: 140 RILLPETWQGHPLGLD----------YDPEKPQVV 164
>gi|313202844|ref|YP_004041501.1| NADH dehydrogenase subunit d; NADH dehydrogenase subunit c
[Paludibacter propionicigenes WB4]
gi|312442160|gb|ADQ78516.1| NADH dehydrogenase subunit D; NADH dehydrogenase subunit C
[Paludibacter propionicigenes WB4]
Length = 542
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E++ I+N+ +V L++ V L L LRD+ F ++ L G+D
Sbjct: 1 MENIKKLILNTVPTAVIEEKQK---LTVTVASDKLHLLAKTLRDNVELPFDMLVKLIGMD 57
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
++ L+ E + S+ ++ A + EREV+ + GI F
Sbjct: 58 RGEELGVNYLLCSSTDLSKELVLKTGTTDRENPLLYSVTDLFETAHYNEREVYALLGIRF 117
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFP 149
+PD+R+ + + G+PLRKD+
Sbjct: 118 INNPDMRKFFLNADWNGYPLRKDYD 142
>gi|15897263|ref|NP_341868.1| NADH dehydrogenase subunit C [Sulfolobus solfataricus P2]
gi|13813468|gb|AAK40658.1| NADH dehydrogenase subunit C (NuoC) [Sulfolobus solfataricus P2]
Length = 169
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLV-SLCSFLRDDPHCCFVNIID 59
M ++ L + + F + + S +++ V ++ + SFL+D F ++
Sbjct: 6 MSEALKSLVNDLQTKF--KCQAKIESDRRITVIVPDKKIIRDVASFLKD---FGFDHVKA 60
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-----EGKSVPSIVGIYPGADWFER 114
+ G+D+ +VVYH S ++ +A+ + S+PS+ I+ A ER
Sbjct: 61 VTGIDYPEHEK-LEVVYHISSYSNLDLAKIILALRTTVSYKDPSLPSLYSIFESAWTGER 119
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
E ++M GI FEGHPDLRR D FEG +PLRK + +
Sbjct: 120 ETYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSYKIK 157
>gi|313126884|ref|YP_004037154.1| NADH dehydrogenase subunit d; NADH dehydrogenase subunit c
[Halogeometricum borinquense DSM 11551]
gi|312293249|gb|ADQ67709.1| NADH dehydrogenase subunit D; NADH dehydrogenase subunit C
[Halogeometricum borinquense DSM 11551]
Length = 558
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
GD I V V + D+ LRD F ++ + + R
Sbjct: 22 GDEIAELLGDLVIGREEHVNAPGFVIRPDDVQETLFRLRD--EAGFDHLSCVTAEEREDR 79
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ + + V + S ++ ADW ERE +D+ GI ++ HP
Sbjct: 80 YESIYHLTSYDDRTREVSVVVPA-AKDNPHSQSGNAVFRTADWHEREAYDLVGIEYDDHP 138
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVEL 156
DLRRIL ++GHPL DF +
Sbjct: 139 DLRRILLPETWQGHPLSMDFDQDRPQVV 166
>gi|256380640|ref|YP_003104300.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Actinosynnema mirum
DSM 43827]
gi|255924943|gb|ACU40454.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Actinosynnema mirum
DSM 43827]
Length = 196
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ G+ + G+ + V D + RD+ C F + + + S
Sbjct: 8 LAERVPGA--QVKTAFGQTTAHVALADWTIAAAHARDELGCAFFDWLGVEDAGRPGASGG 65
Query: 72 FD-VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
V+ H +P L ++ V +++PS+ G++ GA W ERE +M+GI G PD
Sbjct: 66 AHAVLLHVANPDTREGLALRTEVGADEALPSVAGLWAGAAWHEREAAEMFGIPILGRPDP 125
Query: 131 RRILTDYGFEGHPLRKDFPV 150
R+L F GHPLRKDF +
Sbjct: 126 ERLLLPDSFAGHPLRKDFVL 145
>gi|172036677|ref|YP_001803178.1| NADH dehydrogenase subunit J [Cyanothece sp. ATCC 51142]
gi|218527826|sp|B1WZG0|NDHJ_CYAA5 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|171698131|gb|ACB51112.1| NADH dehydrogenase subunit J [Cyanothece sp. ATCC 51142]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ V LV LC+ L F + D + + + +R
Sbjct: 49 IKVSPDFLVPLCTAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLIKVSDNCEQAEEVR 105
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ + +PS+ I+ ADW ERE +DMYGI ++GHPDL+RIL + G PLRKD
Sbjct: 106 IKVFLPRDNPHIPSVYWIWKAADWQERESYDMYGIIYDGHPDLKRILMPEDWVGWPLRKD 165
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 166 YVSPDFYELQ 175
>gi|51892726|ref|YP_075417.1| NADH dehydrogenase I subunit C [Symbiobacterium thermophilum IAM
14863]
gi|51856415|dbj|BAD40573.1| NADH dehydrogenase I subunit C [Symbiobacterium thermophilum IAM
14863]
Length = 200
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGEL-SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ ++ +F G V + + + V + +L++ F ++D+ D
Sbjct: 18 HEVIPALIEAFPGKVEQIPPTNDLIPQVYVASDVHEPVARWLKER---GFHMLVDITAAD 74
Query: 65 -FLSRSNRFDVVYHFLSP--------KYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
+ R RF++VYH K +RV++ + E + V S+ I+ A+ ERE
Sbjct: 75 YWPKREPRFELVYHLREMPEKDPKGDKGLGMIRVRVKLTEKEPVQSLSHIWEMANPAERE 134
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
+WD +G+ GHP+L RIL +EGHPLR+D+P+ G
Sbjct: 135 IWDQFGLNIVGHPNLTRILNPDDWEGHPLRRDYPLRGP 172
>gi|46200220|ref|YP_005887.1| NADH-quinone oxidoreductase chain C [Thermus thermophilus HB27]
gi|55980055|ref|YP_143352.1| NADH-quinone oxidoreductase subunit 5 [Thermus thermophilus HB8]
gi|2499323|sp|Q56219|NQO5_THET8 RecName: Full=NADH-quinone oxidoreductase subunit 5; AltName:
Full=NADH dehydrogenase I chain 5; AltName: Full=NDH-1
subunit 5
gi|81405217|sp|Q72GD0|NUOC_THET2 RecName: Full=NADH-quinone oxidoreductase subunit C; AltName:
Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1
subunit C
gi|90109658|pdb|2FUG|5 Chain 5, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
gi|90109666|pdb|2FUG|E Chain E, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
gi|90109674|pdb|2FUG|N Chain N, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
gi|90109682|pdb|2FUG|W Chain W, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
gi|258588592|pdb|3I9V|5 Chain 5, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 2 MolASU
gi|258588600|pdb|3I9V|E Chain E, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 2 MolASU
gi|258588608|pdb|3IAM|5 Chain 5, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Reduced, 2 MolASU,
With Bound Nadh
gi|258588616|pdb|3IAM|E Chain E, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Reduced, 2 MolASU,
With Bound Nadh
gi|258588624|pdb|3IAS|5 Chain 5, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
Re-Refined To 3.15 Angstrom Resolution
gi|258588632|pdb|3IAS|E Chain E, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
Re-Refined To 3.15 Angstrom Resolution
gi|258588640|pdb|3IAS|N Chain N, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
Re-Refined To 3.15 Angstrom Resolution
gi|258588648|pdb|3IAS|W Chain W, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
Re-Refined To 3.15 Angstrom Resolution
gi|296863608|pdb|3M9S|5 Chain 5, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
gi|296863621|pdb|3M9S|E Chain E, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
gi|1279863|gb|AAA97940.1| NADH dehydrogenase I, subunit NQO5 [Thermus thermophilus]
gi|46197848|gb|AAS82260.1| NADH-quinone oxidoreductase chain C [Thermus thermophilus HB27]
gi|55771468|dbj|BAD69909.1| NADH-quinone oxidoreductase chain 5 [Thermus thermophilus HB8]
Length = 207
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + + + N +G L + + + + F + D+ G+D+L+
Sbjct: 3 LERVLEEARAKGYPIEDNGLGNLWVVLPRERFKEEMAHYK---AMGFNFLADIVGLDYLT 59
Query: 68 RSN---------RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVW 117
+ V R V++ V E + ++ A++ EREV+
Sbjct: 60 YPDPRPERFAVVYELVSLPGWKDGDGSRFFVRVYVPEEDPRLPTVTDLWGSANFLEREVY 119
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV----TGFVELHY 158
D++GI FEGHPDLR+ILT EGHPLRKD+P+ T F E Y
Sbjct: 120 DLFGIVFEGHPDLRKILTPEDLEGHPLRKDYPLGETPTLFREGRY 164
>gi|284922657|emb|CBG35745.1| formate hydrogenlyase subunit 5 [Escherichia coli 042]
Length = 571
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 14/157 (8%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSMSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 57
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 58 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 116
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 153
>gi|21228591|ref|NP_634513.1| NADH dehydrogenase subunit C [Methanosarcina mazei Go1]
gi|7649015|gb|AAF65733.1|AF228525_3 F420H2 dehydrogenase subunit FpoC [Methanosarcina mazei Go1]
gi|20907085|gb|AAM32185.1| F420H2 dehydrogenase subunit [Methanosarcina mazei Go1]
Length = 158
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 7 DLGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ + + F ++ A + S + VD +C +L+ F ++ + GVD+
Sbjct: 5 TIIESLTGKFPEAISEAGIESPIRIRAYVDKDKAKEVCEYLK--GSLQFDHLCSVSGVDY 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFF 124
R V YH S + L +K + + S+V +Y A+W+ERE +++YGIFF
Sbjct: 63 PQRDELEAV-YHIASYDHPVVLMLKARLPRDSPEIESVVSVYWNANWYERETYELYGIFF 121
Query: 125 EGHPDLRRILTDYGFEG-HPLRKDF 148
+ HP+L+ ++ G PLRKD+
Sbjct: 122 KNHPELKPLVLPDDMLGEWPLRKDY 146
>gi|126657572|ref|ZP_01728728.1| NADH dehydrogenase subunit C [Cyanothece sp. CCY0110]
gi|126621276|gb|EAZ91989.1| NADH dehydrogenase subunit C [Cyanothece sp. CCY0110]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ V L+ LC+ L F + D + + +R
Sbjct: 49 IKVSPDFLIPLCTAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLIKVSDNCDQAEEVR 105
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ ++ VPS+ I+ ADW ERE +DMYGI ++GHPDL+RIL + G PLRKD
Sbjct: 106 IKVFLSRDNPHVPSVYWIWKSADWQERESYDMYGIVYDGHPDLKRILMPEDWVGWPLRKD 165
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 166 YVSPDFYELQ 175
>gi|332706503|ref|ZP_08426564.1| NADH dehydrogenase subunit C [Lyngbya majuscula 3L]
gi|332354387|gb|EGJ33866.1| NADH dehydrogenase subunit C [Lyngbya majuscula 3L]
Length = 176
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L V + + + L F + G DF ++ + + +
Sbjct: 46 VLKVQPDVWLPIATAL---YAYGFNYLQCQGGYDFGPGADLVSFYHLIKVSDNTDQPEEV 102
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
RVK+ + VPS+ I+ ADW ERE +DM+GI FEGHP+L+RIL + G PLRK
Sbjct: 103 RVKVFLPRDNPKVPSVYWIWKAADWQERETYDMFGIVFEGHPNLKRILMPEDWVGWPLRK 162
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 163 DYISPDFYELQ 173
>gi|217032323|ref|ZP_03437819.1| hypothetical protein HPB128_132g21 [Helicobacter pylori B128]
gi|298735714|ref|YP_003728239.1| NADH dehydrogenase I subunit C [Helicobacter pylori B8]
gi|216945989|gb|EEC24603.1| hypothetical protein HPB128_132g21 [Helicobacter pylori B128]
gi|298354903|emb|CBI65775.1| NADH dehydrogenase I chain C [Helicobacter pylori B8]
Length = 265
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S+ + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSVATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
+ K RR+RVK + +SV S+ +Y A+W ERE +D+ GI F+ HP L+R++
Sbjct: 107 GFSDNCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDLLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|72383494|ref|YP_292849.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. NATL2A]
gi|123620409|sp|Q46H82|NDHJ_PROMT RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|72003344|gb|AAZ59146.1| NADH dehydrogenase subunit C [Prochlorococcus marinus str. NATL2A]
Length = 173
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK-------Y 83
+ + +L+++ L++D F + G D N +
Sbjct: 40 VIKISPNNLLTIVEALKND---GFNYLQCQGGYDEGPGLNIVCFYNLIEMNELKEDISPR 96
Query: 84 NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
RL+V + +VPS+ ++ GADW ERE +DMYG+ F+GHP +R+L ++G P
Sbjct: 97 EVRLKVFLDRNGDLTVPSLYSLFRGADWQERETFDMYGVNFQGHPHPKRLLMPEDWKGWP 156
Query: 144 LRKDFPVTGFVELH 157
LRKD+ F E+
Sbjct: 157 LRKDYVQPDFYEMQ 170
>gi|317009946|gb|ADU80526.1| NADH dehydrogenase subunit C [Helicobacter pylori India7]
Length = 265
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF- 78
+ + D+ S + LR + + ++ +D ++ F++ Y F
Sbjct: 50 ILDKYIETNTAVFWIKKDDIFSAATILRH---LGYECLSEMSAIDLCAKKGHFELFYQFV 106
Query: 79 ---LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
S K RR+RVK + +SV S+ +Y A+W ERE +D+ GI F+ HP L+R++
Sbjct: 107 GFSDSCKNRRRVRVKCVLLPNESVDSLSFLYRSANWSEREAYDLLGIVFDKHPYLKRLIM 166
Query: 136 DYGFEGHPLRKDFPVTGFVELHYDDKVK 163
+ + GHPL + +P+ G + + K
Sbjct: 167 PHDWVGHPLLRSYPLKGDEFAQWYEVDK 194
>gi|118581193|ref|YP_902443.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pelobacter
propionicus DSM 2379]
gi|118581201|ref|YP_902451.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pelobacter
propionicus DSM 2379]
gi|118503903|gb|ABL00386.1| NADH dehydrogenase subunit C [Pelobacter propionicus DSM 2379]
gi|118503911|gb|ABL00394.1| NADH dehydrogenase subunit C [Pelobacter propionicus DSM 2379]
Length = 557
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 26/187 (13%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+K++ L D F +++ A L + +D + +C ++ D + +I +
Sbjct: 3 SKKLQQLKD----KFGSAIQQADVVNDMRLLVYIDPASVKPICQYIFRDMDARY--VISI 56
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
D + + E + SI GI P A+W ERE+ D+
Sbjct: 57 GSDDRPYSGKFLVFHQFAFDKEKILFSIICQLPGENPRIDSISGIIPAANWAERELKDLL 116
Query: 121 GIFFEGHPDLRRILTDYGFE--GHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
GI GHP +R++ + HPLRKDF E YD++ R+
Sbjct: 117 GIEPVGHPYPKRLVLPDAWPDGHHPLRKDFAWNKIPE-GYDEE---------------RE 160
Query: 179 YDF-LSP 184
+DF +P
Sbjct: 161 FDFDETP 167
>gi|126465958|ref|YP_001041067.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Staphylothermus
marinus F1]
gi|126014781|gb|ABN70159.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Staphylothermus
marinus F1]
Length = 548
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 12/172 (6%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M+ +I+ + +I+ V+ + L L +D L + +D + F ++
Sbjct: 1 MINRIDSVRQHIIEKLGDIVKETKYIGDQALMLRIDRNYLRKAVDIIHNDLNAYFRTMV- 59
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
VD S + F Y F + + VK + + V I+ I P ADW+E E WD
Sbjct: 60 --AVDERSLNGTFASYYIFGLDAAHLNIIVKTHTSADEPVLPSIIDIVPAADWYELEAWD 117
Query: 119 MYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTGFVELHYDDKVKKVVYRP 169
+ GI FE R +L D EG +PLRKD VE Y K +KV +P
Sbjct: 118 LLGIKFENRKVHRFVLPDEWPEGIYPLRKD------VEYTYRPKPRKVPRQP 163
>gi|290559401|gb|EFD92733.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Candidatus
Parvarchaeum acidophilus ARMAN-5]
Length = 155
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E+L + ++ F+G + G+ +L++ L L + F + L VD
Sbjct: 1 MENLSEKLIKEFNGKLDAI---KGQNNLNIVALKNKKLIKKLSWEIKNYFDILYTLTVVD 57
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ V ++ + + + S+ SI I+ A+W ERE +D++GI F
Sbjct: 58 YSPVFELNYVFSNYENDDIL--IVKVNLDEKDLSIDSITDIFDSANWEEREAYDLFGIKF 115
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
GHPDLRRIL + GHPLRK F + E+
Sbjct: 116 NGHPDLRRILLPEDWPGHPLRKSFEIND--EVR 146
>gi|71892264|ref|YP_277998.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|123640868|sp|Q492H8|NUOCD_BLOPB RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|71796370|gb|AAZ41121.1| NADH dehydrogenase I chain C, D [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 596
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-------RSNRFDVVYHFLS 80
G L + + ++ + +FL+ ++ + DL G+D + F V YH +S
Sbjct: 42 GILIIWIKREMVIPVLTFLKTTSK-PYIMLYDLHGIDERLRIHREGLPESDFTVFYHLIS 100
Query: 81 PKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
N + +K+ + E ++V ++ A+W+ERE W+M+GI F HP+L RI+ +
Sbjct: 101 ILRNDDIIIKVPLLEQSLYIDTVVSVFANANWYERETWEMFGIHFNKHPNLTRIIMPKNW 160
Query: 140 EGHPLRKDFP 149
G+PLRK++P
Sbjct: 161 NGYPLRKEYP 170
>gi|24372605|ref|NP_716647.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Shewanella
oneidensis MR-1]
gi|81589370|sp|Q8EI31|NUOCD_SHEON RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|24346630|gb|AAN54092.1|AE015546_9 NADH dehydrogenase I, C/D subunits [Shewanella oneidensis MR-1]
Length = 601
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKY 83
+ + L + FLR P FV + DL D RS+R F V YH +S
Sbjct: 50 VVWLPRELLQDVVGFLRKLP-APFVMLYDLSATDERLRSHRDGLPQSDFTVFYHLISIDR 108
Query: 84 NRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
N + +K+A+ +P+I +P A+W+EREVWD+ GI F+GHP L RI+ ++GH
Sbjct: 109 NADVMLKVALAESDLHLPTITNHFPNANWYEREVWDLMGITFDGHPHLTRIMMPKSWQGH 168
Query: 143 PLRKDFP 149
PLRKD+P
Sbjct: 169 PLRKDYP 175
>gi|297565712|ref|YP_003684684.1| NADH (or F420H2) dehydrogenase subunit C [Meiothermus silvanus DSM
9946]
gi|296850161|gb|ADH63176.1| NADH (or F420H2) dehydrogenase, subunit C [Meiothermus silvanus DSM
9946]
Length = 208
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 13/139 (9%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----FDVVYH 77
+ G + + + + R F + D+ GVD+L+ V Y
Sbjct: 17 KTESQHGNTWVVLPREEFKAQM---RAFQEMGFNYLADVIGVDYLTYPEPKPERLAVAYE 73
Query: 78 FLSP-----KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+S R+ V++ V E V +V ++ AD+ EREV+D++GI F+GHPDLR
Sbjct: 74 LVSLPGYKDGDGSRMFVRVYVPEKDPVIPTVVDLWLSADYLEREVYDLFGIRFDGHPDLR 133
Query: 132 RILTDYGFEGHPLRKDFPV 150
+ILT EGHPLRKD+P+
Sbjct: 134 KILTPEDLEGHPLRKDYPL 152
>gi|297616444|ref|YP_003701603.1| NADH (or F420H2) dehydrogenase, subunit C [Syntrophothermus
lipocalidus DSM 12680]
gi|297144281|gb|ADI01038.1| NADH (or F420H2) dehydrogenase, subunit C [Syntrophothermus
lipocalidus DSM 12680]
Length = 146
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ + + I F V G + V C + L L++ F + +L
Sbjct: 1 MKVLKGVVEDISQVFGDQVL-IEEGAGFTVIRVICPQVSLLMRRLKEIH--GFNYLANLT 57
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
VD+ R V + + P+ + E VPS+V ++P ADW EREV+D+ G
Sbjct: 58 AVDYRDRFE--LVYHVYAVPENRGLVVKTSVSREEPVVPSVVSVWPAADWQEREVFDLLG 115
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFP 149
I FEGH +LRRIL GFEGHPLRKDFP
Sbjct: 116 ISFEGHSNLRRILLPEGFEGHPLRKDFP 143
>gi|56750377|ref|YP_171078.1| NADH dehydrogenase subunit J [Synechococcus elongatus PCC 6301]
gi|81676954|sp|Q5N561|NDHJ_SYNP6 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|56685336|dbj|BAD78558.1| NADH dehydrogenase subunit I [Synechococcus elongatus PCC 6301]
Length = 172
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Query: 21 RFAVNSVGEL---SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
L + VD L+ + + L F + G D + +
Sbjct: 29 ENTALERDHLGVEIVQVDREVLLPIAAAL---FAYGFNYLQCQGGYDLGPGQDLVSFYHL 85
Query: 78 FL-----SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
S R++V + VP + I+ GADW ERE +DMYGI FEGHP+L+R
Sbjct: 86 TKVSDDASQPQEVRVKVFLP-RHDPKVPPVFWIWKGADWQERETFDMYGIQFEGHPNLKR 144
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELH 157
IL + G PLRKD+ F EL
Sbjct: 145 ILMPEDWVGWPLRKDYISPDFYELQ 169
>gi|205355592|ref|ZP_03222362.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205346369|gb|EDZ33002.1| NADH dehydrogenase I chain C [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 190
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADW 111
+++ + +DF++ N F+V Y L+ + R+R+K V + + S+ ++ GA+W
Sbjct: 5 LGYLSFTEASAIDFIASKNGFEVFYQLLNLEKKLRVRIKTFVGVKERLQSVAHVFKGANW 64
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
ERE++DM+GIF HP+L+RIL + GHPL K +P+ G + + K
Sbjct: 65 SEREIYDMFGIFIINHPNLKRILMPDDWFGHPLLKTYPLKGDEFARWYEIDK 116
>gi|17231332|ref|NP_487880.1| NADH dehydrogenase subunit J [Nostoc sp. PCC 7120]
gi|20141595|sp|Q44241|NDHJ_ANASP RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|5139326|emb|CAB45641.1| NDH-J protein [Nostoc sp. PCC 7120]
gi|17132974|dbj|BAB75539.1| NADH dehydrogenase chain J [Nostoc sp. PCC 7120]
Length = 175
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSP 81
+ G + V+ L+ + + L F + GVD + V + +
Sbjct: 39 DKNGVEIIKVEADFLLPIATAL---YAYGFNYLQFQGGVDLGPGQDLVSVYHLVKVSDNA 95
Query: 82 KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+RVK+ + V + I+ ADW ERE +DM+GI +EGHP+L+RIL +
Sbjct: 96 DKPEEIRVKVFLPRENPVVPSVYWIWKTADWQERESYDMFGIIYEGHPNLKRILMPEDWV 155
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F EL
Sbjct: 156 GWPLRKDYISPDFYELQ 172
>gi|116075556|ref|ZP_01472815.1| NADH dehydrogenase subunit J [Synechococcus sp. RS9916]
gi|116066871|gb|EAU72626.1| NADH dehydrogenase subunit J [Synechococcus sp. RS9916]
Length = 184
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK-------- 82
++ VD L + + L+ + F + G D ++ + +
Sbjct: 49 TIGVDPVFLPVIAAALKGN---GFDYLQCQGGYDEGPGAHLVCFYHLVAMAEVTEGKTDA 105
Query: 83 -YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
R++V + S+PS+ G++ GADW ERE +DM+GI F+GHP +R+L ++G
Sbjct: 106 VREVRVKVFLPRDGEPSLPSLYGLFRGADWQERETFDMFGIRFDGHPHPKRLLMPEDWKG 165
Query: 142 HPLRKDFPVTGFVELH 157
PLRKD+ F E+
Sbjct: 166 WPLRKDYVQPDFYEMQ 181
>gi|87123073|ref|ZP_01078924.1| NADH dehydrogenase I chain J [Synechococcus sp. RS9917]
gi|86168793|gb|EAQ70049.1| NADH dehydrogenase I chain J [Synechococcus sp. RS9917]
Length = 182
Score = 95.4 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK-------- 82
++ V+ L + + L+ F + G D +
Sbjct: 47 TIGVEAIFLPVIAAALKSH---GFDYLQCQGGYDKGPGQQLVCFYHLVAMADVVEGRSDA 103
Query: 83 -YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
RL+V + SVPS+ G++ GADW ERE +DM+GI FEGHP +R+L ++G
Sbjct: 104 VREVRLKVFLPREGQPSVPSLYGLFRGADWQERETFDMFGIQFEGHPHPKRLLMPEDWKG 163
Query: 142 HPLRKDFPVTGFVELH 157
PLRKD+ F E+
Sbjct: 164 WPLRKDYVQPDFYEMQ 179
>gi|218440675|ref|YP_002379004.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 7424]
gi|218173403|gb|ACK72136.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Cyanothece sp. PCC
7424]
Length = 175
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR---LR 88
+ VD L+ L + L F + D + R +R
Sbjct: 46 IKVDPEFLLPLATAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLIKVSDNADRPEEVR 102
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ + V S+ I+ ADW ERE +DMYGI +EGHPDL+RIL + G PLRKD
Sbjct: 103 IKVFLPRDNPKVASVYWIWKAADWQERESYDMYGIVYEGHPDLKRILMPEDWIGWPLRKD 162
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 163 YVSPDFFELQ 172
>gi|313679587|ref|YP_004057326.1| NADH dehydrogenase subunit c [Oceanithermus profundus DSM 14977]
gi|313152302|gb|ADR36153.1| NADH dehydrogenase subunit C [Oceanithermus profundus DSM 14977]
Length = 209
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR----FDVVYHF 78
+ G + +DV L F + F + ++ G+D+ + + V++
Sbjct: 17 VEEARGLVWVDVPREALGD---FFQAMQELGFNYLANVIGIDYSTYPEPRPERYAVLHEL 73
Query: 79 LSPK-----YNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
+S K R +I V E V V Y A++FERE++D+ GI FEGHPDLR+
Sbjct: 74 VSMKGWKDGDGSRFFARIWVPERDPVLPSAVPFYASANFFEREIFDLLGIRFEGHPDLRK 133
Query: 133 ILTDYGFEGHPLRKDFPV----TGFVELHY 158
ILT EGHPLRKD+P+ T F + Y
Sbjct: 134 ILTPEDLEGHPLRKDYPLGETPTQFKDGRY 163
>gi|75908081|ref|YP_322377.1| NADH dehydrogenase subunit J [Anabaena variabilis ATCC 29413]
gi|92090621|sp|Q9XBL6|NDHJ_ANAVT RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|75701806|gb|ABA21482.1| NADH dehydrogenase subunit C [Anabaena variabilis ATCC 29413]
Length = 175
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSP 81
+ G + V+ L+ + + L F + G+D + V + +
Sbjct: 39 DKNGVEIIKVEPDFLLPIATAL---YAYGFNYLQFQGGIDLGPGQDLVSVYHLVKVSDNA 95
Query: 82 KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+RVK+ + V + I+ ADW ERE +DM+GI +EGHP+L+RIL +
Sbjct: 96 DKPEEVRVKVFLPRENPVVPSVYWIWKTADWQERESYDMFGIIYEGHPNLKRILMPEDWV 155
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F EL
Sbjct: 156 GWPLRKDYISPDFYELQ 172
>gi|325298884|ref|YP_004258801.1| NADH-ubiquinone oxidoreductase chain 49kDa [Bacteroides
salanitronis DSM 18170]
gi|324318437|gb|ADY36328.1| NADH-ubiquinone oxidoreductase chain 49kDa [Bacteroides
salanitronis DSM 18170]
Length = 538
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 19 SVRFAVNSVGEL-SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
++ A G + + + + LR+DP + ++ G+D+
Sbjct: 8 KIQGAEVCAGNAGVIKLPLSEFRKVMEGLRNDPQSPMDFLREIVGMDWGEEGLGAVYFME 67
Query: 78 FLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+R E +P++ ++ A EREV+D +GI F GHPD+RR+
Sbjct: 68 STVTGDTVAIRTATTDREEAYLPTVSDLWKTALIKEREVYDFFGIRFIGHPDMRRLFLRE 127
Query: 138 GFEGHPLRKDF-----PVTGFVELHYDDKVK 163
+ G PLRKD+ P+ E++ D +
Sbjct: 128 DWIGWPLRKDYDMNSNPLRLDNEINADITKE 158
>gi|78211757|ref|YP_380536.1| NADH dehydrogenase subunit J [Synechococcus sp. CC9605]
gi|123578939|sp|Q3AN51|NDHJ_SYNSC RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|78196216|gb|ABB33981.1| NADH dehydrogenase I chain J [Synechococcus sp. CC9605]
Length = 188
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY-------- 83
+ VD L + + L+ + F + G D + +
Sbjct: 50 IGVDAAVLPMIAAALKSN---GFDYLQCQGGYDEGPGEQLVCFYHLLAMAEQVEAMVADP 106
Query: 84 -----NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
R++V + S+PSI G++ GADW ERE +DMYGI FEGHP +R+L
Sbjct: 107 SAKLREVRIKVFLNREGTPSLPSIYGLFRGADWQERETFDMYGIQFEGHPHPKRLLMPED 166
Query: 139 FEGHPLRKDFPVTGFVELH 157
++G PLRKD+ F E+
Sbjct: 167 WKGWPLRKDYVQPDFYEMQ 185
>gi|110642844|ref|YP_670574.1| formate hydrogenase-3 component E [Escherichia coli 536]
gi|110344436|gb|ABG70673.1| formate hydrogenase-3 component E [Escherichia coli 536]
Length = 569
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTITVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|191171349|ref|ZP_03032898.1| formate hydrogenlyase, subunit E [Escherichia coli F11]
gi|300975043|ref|ZP_07172844.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
200-1]
gi|190908283|gb|EDV67873.1| formate hydrogenlyase, subunit E [Escherichia coli F11]
gi|300308811|gb|EFJ63331.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
200-1]
gi|324013676|gb|EGB82895.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
60-1]
Length = 576
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTITVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|187733129|ref|YP_001881532.1| formate hydrogenlyase subunit E [Shigella boydii CDC 3083-94]
gi|187430121|gb|ACD09395.1| formate hydrogenlyase, subunit E [Shigella boydii CDC 3083-94]
Length = 569
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTITVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|322369188|ref|ZP_08043753.1| NADH dehydrogenase-like complex subunit CD [Haladaptatus
paucihalophilus DX253]
gi|320550920|gb|EFW92569.1| NADH dehydrogenase-like complex subunit CD [Haladaptatus
paucihalophilus DX253]
Length = 551
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
GD + V + V ++ + LRD F ++ + D+ R
Sbjct: 15 GDQLAALLGDHVIGREEHLNAPGFVVRPDEVQDALTILRD--EAGFDHLSMVTAQDYEDR 72
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ + P + V + + +Y ADW ERE +D+ GI ++GHP
Sbjct: 73 YESVYHLKKYADPTQEVSVVVPTPTDA-PASQTAEPVYRSADWHEREAYDLVGIDYDGHP 131
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
DLRRIL ++GHPL +++ + +++
Sbjct: 132 DLRRILLPETWQGHPLAQNYDQDRPQIVSFEEHK 165
>gi|257386259|ref|YP_003176032.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halomicrobium
mukohataei DSM 12286]
gi|257168566|gb|ACV46325.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halomicrobium
mukohataei DSM 12286]
Length = 543
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
+V + ++ V + S+ S L+ + + + ++ R +
Sbjct: 18 SAVVGTEDHENAPAIVVRADAVESVLSTLK--TEAGYDHCACVTAQEYGDRFETIYHLRT 75
Query: 78 FLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+ P + V + + S G+Y A W ERE +D+ GI +EGHPDLRRIL
Sbjct: 76 YDDPTDELSVVVPT-LHDDPHSESGAGVYETAAWHEREAYDLLGITYEGHPDLRRILLPE 134
Query: 138 GFEGHPLRKDFPVTGFVELHYDDKVK 163
++GHPLR+ + + + + +
Sbjct: 135 TWQGHPLRESYNQDKPQIVPFREHER 160
>gi|81299991|ref|YP_400199.1| NADH dehydrogenase subunit J [Synechococcus elongatus PCC 7942]
gi|123556950|sp|Q31P07|NDHJ_SYNE7 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|81168872|gb|ABB57212.1| NADH dehydrogenase I subunit J [Synechococcus elongatus PCC 7942]
Length = 172
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 21 RFAVNSVGEL---SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
L + VD L+ + + L F + G D + +
Sbjct: 29 ENTALERDHLGVEIVQVDREVLLPIAAAL---FAYGFNYLQCQGGYDLGPGQDLVSFYHL 85
Query: 78 FL-----SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
S R++V + VPS+ I+ GADW ERE +DMYGI FEGHP+L+R
Sbjct: 86 TKVSDDASQPQEVRVKVFLP-RHDPKVPSVFWIWKGADWQERETFDMYGIQFEGHPNLKR 144
Query: 133 ILTDYGFEGHPLRKDFPVTGFVELH 157
IL + G PLRKD+ F EL
Sbjct: 145 ILMPEDWVGWPLRKDYISPDFYELQ 169
>gi|260436148|ref|ZP_05790118.1| NAD(P)H-quinone oxidoreductase subunit J [Synechococcus sp. WH
8109]
gi|260414022|gb|EEX07318.1| NAD(P)H-quinone oxidoreductase subunit J [Synechococcus sp. WH
8109]
Length = 188
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY-------- 83
+ VD L + + L+ + F + G D + +
Sbjct: 50 IGVDAAVLPMIAAALKSN---GFDYLQCQGGYDEGPGEQLVCFYHLLAMAEQVEAMAANS 106
Query: 84 -----NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
R++V + S+PSI G++ GADW ERE +DMYGI FEGHP +R+L
Sbjct: 107 SAKLREVRIKVFLDREGTPSLPSIYGLFRGADWQERETFDMYGIQFEGHPHPKRLLMPED 166
Query: 139 FEGHPLRKDFPVTGFVELH 157
++G PLRKD+ F E+
Sbjct: 167 WKGWPLRKDYIQPDFYEMQ 185
>gi|15606009|ref|NP_213386.1| NADH dehydrogenase I chain D [Aquifex aeolicus VF5]
gi|81343428|sp|O66826|NUCD1_AQUAE RecName: Full=NADH-quinone oxidoreductase subunit C/D 1; AltName:
Full=NADH dehydrogenase I subunit C/D 1; AltName:
Full=NDH-1 subunit C/D 1
gi|2983187|gb|AAC06787.1| NADH dehydrogenase I chain D [Aquifex aeolicus VF5]
Length = 593
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 23/165 (13%)
Query: 12 IVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF---LS 67
+ + +V + S+ V L+ + +L+ + +D VD L
Sbjct: 9 LQELLKAFPQASVVELQNSTSVIVPKDILIDVLKYLK--EKLGYKLFLDHSVVDLKDLLE 66
Query: 68 RSNRFD-----------------VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGAD 110
F+ ++ + R RV + +P+I ++
Sbjct: 67 NEKEFNKVVKQNLIAFPEDRESRFQAFYILYNVDERKRVIVKTRTNGKLPTIEKLWFAGK 126
Query: 111 WFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
W ERE +DM+GI +EGH +L R + PLRKDFP+ G E
Sbjct: 127 WAERECYDMFGIEYEGHENLVRAFMWDTYPYFPLRKDFPLEGIPE 171
>gi|110667598|ref|YP_657409.1| NADH dehydrogenase, subunit Cd (ubiquinone) [Haloquadratum walsbyi
DSM 16790]
gi|109625345|emb|CAJ51767.1| NADH dehydrogenase, subunit CD (ubiquinone) [Haloquadratum walsbyi
DSM 16790]
Length = 559
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ GD I + S V + + + + D+ LR+ F ++ +
Sbjct: 16 AEQLPTTGDEIESLLSDVVIGRDDHLNAPGVIIRPDDVQKTLRRLRN--KAGFDHLSCVT 73
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
+ + R + + + V + S ++ ADW ERE +D+ G
Sbjct: 74 ADERVDRYESIYHLTSYDDRTRELSVVVPT-TKDDPVSESAAPVFRTADWHEREAYDLIG 132
Query: 122 IFFEGHPDLRRILTDYGFEGHPL 144
I +E HPDLRRIL ++GHPL
Sbjct: 133 INYEDHPDLRRILLPQTWQGHPL 155
>gi|13541945|ref|NP_111633.1| NADH dehydrogenase subunit C [Thermoplasma volcanium GSS1]
gi|14325376|dbj|BAB60280.1| NADH dehydrogenase I chain C [Thermoplasma volcanium GSS1]
Length = 151
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR 85
G + V +L++L L+ N+ GVD+ + +VVYH + + N
Sbjct: 11 KDGRRIIKVAKENLLALMRDLK----AQGYNLSLTTGVDY---VDHIEVVYHLYNLEKNE 63
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ VK + S+ ++ A+W ERE +D+ GI F+GHP L+R+ G+ GHPLR
Sbjct: 64 YIIVKTETTDNHVP-SLTPLWNAANWDEREEYDLVGIVFDGHPYLKRLFLPEGWVGHPLR 122
Query: 146 KDFPVTGFVELHYDDK 161
K++ ++ ++ D++
Sbjct: 123 KNYDLSKAQYVNMDEE 138
>gi|313156893|gb|EFR56331.1| respiratory-chain NADH dehydrogenase, 49 kD subunit [Alistipes sp.
HGB5]
Length = 537
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 13/154 (8%)
Query: 16 FSGSVRFAV-----NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ + G+ V L + LR + F + L G+D+
Sbjct: 3 LKDKITAWEPQAVWSEAGDGMWTVPAEKFHDLAARLRAE---GFDFLRSLTGMDWGEEGF 59
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
+ N LR E +PS+ ++ A+ EREV+D +GI F HPD+
Sbjct: 60 GAVYHLEASATGENVVLRTLTPSREKCGLPSVCDLWKAAELNEREVFDYFGIGFLNHPDM 119
Query: 131 RRILTDYGFEGHPLRKDF-----PVTGFVELHYD 159
RR+ + G+PLRKD+ P+ E+ D
Sbjct: 120 RRLFLRDDWVGYPLRKDYDPALNPLRMTNEVSMD 153
>gi|123965560|ref|YP_001010641.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9515]
gi|218527869|sp|A2BUS3|NDHJ_PROM5 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|123199926|gb|ABM71534.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. MIT 9515]
Length = 176
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 21/173 (12%)
Query: 3 RKIEDLGDYIVNSFS--------GSVRFAVNSVGELSLD---VDCGDLVSLCSFLRDDPH 51
+ + IV + + ++ V L S L+
Sbjct: 4 NNLSKSSEEIVEQRGIVSNRLYKDGITNNSLGNDHIGVELLSVKPEKLYEAISSLK---K 60
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF-------LSPKYNRRLRVKIAVAEGKSVPSIVG 104
F + G D + L R++V + SVPS+
Sbjct: 61 YGFNYLQCQGGYDEGPGKRLVSFYHLISLQDIEELEEIKEIRVKVFLNRDSDLSVPSLYK 120
Query: 105 IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
I+ G+DW ERE +DMYGI F+ HP+ +RIL + G PLRKD+ F EL
Sbjct: 121 IFKGSDWQERETYDMYGINFQDHPNPKRILMPEDWRGWPLRKDYIQPDFYELQ 173
>gi|126695654|ref|YP_001090540.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9301]
gi|126542697|gb|ABO16939.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. MIT 9301]
Length = 177
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR------ 85
+ V+ L SFLR + F + G D N + +
Sbjct: 45 ISVEPNKLYEAVSFLR---NYGFNYLQCQGGYDEGPGKNLVSFYHFITVDDLQKIEKIKE 101
Query: 86 -RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RL+V + S+PS+ I+ G+DW ERE +DMYGI F HP+ +R+L + G PL
Sbjct: 102 VRLKVFLKRDSDLSIPSLYKIFKGSDWQERETFDMYGINFIDHPNPKRLLMPEDWRGWPL 161
Query: 145 RKDFPVTGFVELH 157
RKD+ F EL
Sbjct: 162 RKDYIQPDFYELQ 174
>gi|218245899|ref|YP_002371270.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 8801]
gi|218166377|gb|ACK65114.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Cyanothece sp. PCC
8801]
Length = 174
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLR 88
+ VD L+ L + L F + D + + +R
Sbjct: 45 IKVDREFLIPLATAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLTKVSDNCDRPEEVR 101
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
VK+ + + I+ ADW ERE +DMYGI +EGHPDL+RIL + G PLRKD
Sbjct: 102 VKVFLPRDNPRVPSVYWIWKAADWQERESYDMYGIIYEGHPDLKRILMPEDWVGWPLRKD 161
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 162 YVSPDFYELQ 171
>gi|218706215|ref|YP_002413734.1| hydrogenase 3, large subunit [Escherichia coli UMN026]
gi|218433312|emb|CAR14212.1| hydrogenase 3, large subunit [Escherichia coli UMN026]
Length = 569
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V + PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKQEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|257058947|ref|YP_003136835.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 8802]
gi|256589113|gb|ACU99999.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Cyanothece sp. PCC
8802]
Length = 174
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLR 88
+ VD L+ L + L F + D + + +R
Sbjct: 45 IKVDREFLIPLATAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLTKVSDNCDRPEEVR 101
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ + + I+ ADW ERE +DMYGI +EGHPDL+RIL + G PLRKD
Sbjct: 102 LKVFLPRDNPRVPSVYWIWKAADWQERESYDMYGIIYEGHPDLKRILMPEDWVGWPLRKD 161
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 162 YVSPDFYELQ 171
>gi|282897132|ref|ZP_06305134.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Raphidiopsis
brookii D9]
gi|281197784|gb|EFA72678.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Raphidiopsis
brookii D9]
Length = 171
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
S S V + V L+ + L F + G+D +
Sbjct: 30 ESLSPDVNGVEI------IKVAPDFLLPTATAL---YAYGFNYLQFQGGIDLGPGQDLVS 80
Query: 74 VVYHFLSPKYNR-----RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
V + R++V + E VPS+ I+ ADW ERE +DM+GI +EGHP
Sbjct: 81 VYHLIKVSSDADKPAEVRIKVFLP-RENPVVPSVYWIWRTADWQERESYDMFGIIYEGHP 139
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+L+RIL + G PLRKD+ F EL
Sbjct: 140 NLKRILMPEDWVGWPLRKDYISPDFYELQ 168
>gi|323960619|gb|EGB56245.1| respiratory-chain NADH dehydrogenase [Escherichia coli H489]
Length = 576
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWIMVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|293406213|ref|ZP_06650139.1| formate hydrogenlyase subunit 5 [Escherichia coli FVEC1412]
gi|298381950|ref|ZP_06991547.1| formate hydrogenlyase subunit 5 [Escherichia coli FVEC1302]
gi|300899960|ref|ZP_07118163.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
198-1]
gi|291426219|gb|EFE99251.1| formate hydrogenlyase subunit 5 [Escherichia coli FVEC1412]
gi|298277090|gb|EFI18606.1| formate hydrogenlyase subunit 5 [Escherichia coli FVEC1302]
gi|300356469|gb|EFJ72339.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
198-1]
Length = 576
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V + PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKQEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|170765867|ref|ZP_02900678.1| formate hydrogenlyase, subunit E [Escherichia albertii TW07627]
gi|170125013|gb|EDS93944.1| formate hydrogenlyase, subunit E [Escherichia albertii TW07627]
Length = 576
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|82778088|ref|YP_404437.1| large subunit of hydrogenase 3 [Shigella dysenteriae Sd197]
gi|309786196|ref|ZP_07680824.1| formate hydrogenlyase subunit 5 [Shigella dysenteriae 1617]
gi|81242236|gb|ABB62946.1| large subunit of hydrogenase 3 [Shigella dysenteriae Sd197]
gi|308925941|gb|EFP71420.1| formate hydrogenlyase subunit 5 [Shigella dysenteriae 1617]
Length = 569
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|33864745|ref|NP_896304.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 8102]
gi|81575355|sp|Q7U9P4|NDHJ_SYNPX RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|33632268|emb|CAE06724.1| NADH dehydrogenase I chain J [Synechococcus sp. WH 8102]
Length = 188
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY-------- 83
+ VD L + + L+ + F + G D + +
Sbjct: 50 IGVDAAVLPIIAAALKSN---GFDYLQCHGGYDEGPGERLVCFYHLLAMAEQLEAMASDP 106
Query: 84 -----NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
RL+V ++ +PSI G++ GADW ERE +DMYGI F+GHP +R+L
Sbjct: 107 AAQLREVRLKVFLSREGTPVLPSIYGLFRGADWQERETFDMYGIQFDGHPHPKRLLMPED 166
Query: 139 FEGHPLRKDFPVTGFVELH 157
++G PLRKD+ F E+
Sbjct: 167 WKGWPLRKDYVQPDFYEMQ 185
>gi|307312856|ref|ZP_07592486.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli W]
gi|306907291|gb|EFN37797.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli W]
gi|315061997|gb|ADT76324.1| hydrogenase 3, large subunit [Escherichia coli W]
gi|323377420|gb|ADX49688.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
KO11]
Length = 569
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|313127384|ref|YP_004037654.1| NADH dehydrogenase subunit d; NADH dehydrogenase subunit c
[Halogeometricum borinquense DSM 11551]
gi|312293749|gb|ADQ68209.1| NADH dehydrogenase subunit D; NADH dehydrogenase subunit C
[Halogeometricum borinquense DSM 11551]
Length = 550
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
V ++ LRD F ++ + ++ R + + P + V
Sbjct: 39 FVVRPDNVQETLRRLRD--EAGFDHLSCVTAQEYEDRYETIYHMKSYDDPTDEVSIVVPT 96
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ S ++ A W ERE +D+ GI ++ HPDLRRIL ++GHPL +D+
Sbjct: 97 P-SNAPVSESGAPVFETAGWHEREAYDLVGIEYDDHPDLRRILLPETWQGHPLSRDYDQD 155
Query: 152 GFVELHYDD 160
+ Y +
Sbjct: 156 RPQIVPYRE 164
>gi|300941097|ref|ZP_07155609.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
21-1]
gi|300454140|gb|EFK17633.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
21-1]
Length = 576
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|209525747|ref|ZP_03274283.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Arthrospira maxima
CS-328]
gi|209493720|gb|EDZ94039.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Arthrospira maxima
CS-328]
Length = 169
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ VD L+ L + L F + C D + + + + +
Sbjct: 40 IKVDRDYLIPLATAL---YAYGFNYLRCQCAYDMGPGEDLVSTYHLAKVQNNVEQLEEVC 96
Query: 89 VKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
VK+ V VPS+ I+ AD+ ERE +DMYGI +EGHP+L+RIL + G PLRKD
Sbjct: 97 VKVFVPRSDPKVPSVYWIWKAADFQERESYDMYGIVYEGHPNLKRILMPEDWVGWPLRKD 156
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 157 YISPDFHELQ 166
>gi|16130628|ref|NP_417201.1| hydrogenase 3, large subunit [Escherichia coli str. K-12 substr.
MG1655]
gi|89109508|ref|AP_003288.1| hydrogenase 3, large subunit [Escherichia coli str. K-12 substr.
W3110]
gi|157162167|ref|YP_001459485.1| formate hydrogenlyase, subunit E [Escherichia coli HS]
gi|170019033|ref|YP_001723987.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
ATCC 8739]
gi|170082297|ref|YP_001731617.1| hydrogenase 3, large subunit [Escherichia coli str. K-12 substr.
DH10B]
gi|188493033|ref|ZP_03000303.1| formate hydrogenlyase subunit, E [Escherichia coli 53638]
gi|218701213|ref|YP_002408842.1| hydrogenase 3, large subunit [Escherichia coli IAI39]
gi|238901858|ref|YP_002927654.1| hydrogenase 3, large subunit [Escherichia coli BW2952]
gi|253772424|ref|YP_003035255.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162652|ref|YP_003045760.1| hydrogenase 3, large subunit [Escherichia coli B str. REL606]
gi|256024772|ref|ZP_05438637.1| formate hydrogenlyase, subunit E [Escherichia sp. 4_1_40B]
gi|293412079|ref|ZP_06654802.1| formate hydrogenlyase subunit 5 [Escherichia coli B354]
gi|307139408|ref|ZP_07498764.1| Formate hydrogenlyase, subunit E [Escherichia coli H736]
gi|312973069|ref|ZP_07787242.1| formate hydrogenlyase subunit 5 [Escherichia coli 1827-70]
gi|123919|sp|P16431|HYCE_ECOLI RecName: Full=Formate hydrogenlyase subunit 5; Short=FHL subunit 5;
AltName: Full=Hydrogenase-3 component E; Flags:
Precursor
gi|41684|emb|CAA35550.1| hycE [Escherichia coli]
gi|882614|gb|AAA69231.1| formate hydrogenlyase subunit 5 [Escherichia coli str. K-12 substr.
MG1655]
gi|1789076|gb|AAC75763.1| hydrogenase 3, large subunit [Escherichia coli str. K-12 substr.
MG1655]
gi|85675542|dbj|BAE76798.1| hydrogenase 3, large subunit [Escherichia coli str. K12 substr.
W3110]
gi|157067847|gb|ABV07102.1| formate hydrogenlyase, subunit E [Escherichia coli HS]
gi|169753961|gb|ACA76660.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
ATCC 8739]
gi|169890132|gb|ACB03839.1| hydrogenase 3, large subunit [Escherichia coli str. K-12 substr.
DH10B]
gi|188488232|gb|EDU63335.1| formate hydrogenlyase subunit, E [Escherichia coli 53638]
gi|218371199|emb|CAR19030.1| hydrogenase 3, large subunit [Escherichia coli IAI39]
gi|238861456|gb|ACR63454.1| hydrogenase 3, large subunit [Escherichia coli BW2952]
gi|242378278|emb|CAQ33053.1| hydrogenase 3, large subunit, subunit of hydrogenase 3 and formate
hydrogenlyase complex [Escherichia coli BL21(DE3)]
gi|253323468|gb|ACT28070.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974553|gb|ACT40224.1| hydrogenase 3, large subunit [Escherichia coli B str. REL606]
gi|253978720|gb|ACT44390.1| hydrogenase 3, large subunit [Escherichia coli BL21(DE3)]
gi|260448229|gb|ACX38651.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
DH1]
gi|291468850|gb|EFF11341.1| formate hydrogenlyase subunit 5 [Escherichia coli B354]
gi|309703080|emb|CBJ02412.1| formate hydrogenlyase subunit 5 [Escherichia coli ETEC H10407]
gi|310333011|gb|EFQ00225.1| formate hydrogenlyase subunit 5 [Escherichia coli 1827-70]
gi|315137328|dbj|BAJ44487.1| formate hydrogenlyase subunit 5 [Escherichia coli DH1]
gi|315615109|gb|EFU95746.1| formate hydrogenlyase subunit 5 [Escherichia coli 3431]
gi|327251444|gb|EGE63130.1| formate hydrogenlyase subunit 5 [Escherichia coli STEC_7v]
gi|332344602|gb|AEE57936.1| formate hydrogenlyase subunit 5 [Escherichia coli UMNK88]
gi|1093498|prf||2104213E hycE gene
Length = 569
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|218690845|ref|YP_002399057.1| hydrogenase 3, large subunit [Escherichia coli ED1a]
gi|218428409|emb|CAR09334.2| hydrogenase 3, large subunit [Escherichia coli ED1a]
Length = 569
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|323951060|gb|EGB46936.1| respiratory-chain NADH dehydrogenase [Escherichia coli H252]
Length = 576
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|170681957|ref|YP_001744870.1| formate hydrogenlyase, subunit E [Escherichia coli SMS-3-5]
gi|194438937|ref|ZP_03071021.1| formate hydrogenlyase, subunit E [Escherichia coli 101-1]
gi|254037760|ref|ZP_04871818.1| formate hydrogenlyase [Escherichia sp. 1_1_43]
gi|293415971|ref|ZP_06658611.1| formate hydrogenlyase subunit 5 [Escherichia coli B185]
gi|300930579|ref|ZP_07145971.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
187-1]
gi|300947001|ref|ZP_07161227.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
116-1]
gi|300954961|ref|ZP_07167373.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
175-1]
gi|301027131|ref|ZP_07190500.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
69-1]
gi|301027396|ref|ZP_07190735.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
196-1]
gi|331643405|ref|ZP_08344536.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli H736]
gi|331658829|ref|ZP_08359771.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA206]
gi|331664275|ref|ZP_08365181.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA143]
gi|331674229|ref|ZP_08374989.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA280]
gi|331684334|ref|ZP_08384926.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli H299]
gi|170519675|gb|ACB17853.1| formate hydrogenlyase, subunit E [Escherichia coli SMS-3-5]
gi|194422058|gb|EDX38061.1| formate hydrogenlyase, subunit E [Escherichia coli 101-1]
gi|226839384|gb|EEH71405.1| formate hydrogenlyase [Escherichia sp. 1_1_43]
gi|291432160|gb|EFF05142.1| formate hydrogenlyase subunit 5 [Escherichia coli B185]
gi|299879310|gb|EFI87521.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
196-1]
gi|300318096|gb|EFJ67880.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
175-1]
gi|300395163|gb|EFJ78701.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
69-1]
gi|300453388|gb|EFK17008.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
116-1]
gi|300461521|gb|EFK25014.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
187-1]
gi|320194859|gb|EFW69488.1| Formate hydrogenlyase subunit 5 [Escherichia coli WV_060327]
gi|323935723|gb|EGB32037.1| respiratory-chain NADH dehydrogenase [Escherichia coli E1520]
gi|323941448|gb|EGB37631.1| respiratory-chain NADH dehydrogenase [Escherichia coli E482]
gi|323966868|gb|EGB62297.1| respiratory-chain NADH dehydrogenase [Escherichia coli M863]
gi|323971550|gb|EGB66783.1| respiratory-chain NADH dehydrogenase [Escherichia coli TA007]
gi|323978669|gb|EGB73751.1| respiratory-chain NADH dehydrogenase [Escherichia coli TW10509]
gi|325496238|gb|EGC94097.1| formate hydrogenlyase, subunit E [Escherichia fergusonii ECD227]
gi|331036876|gb|EGI09100.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli H736]
gi|331053411|gb|EGI25440.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA206]
gi|331058206|gb|EGI30187.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA143]
gi|331068323|gb|EGI39718.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA280]
gi|331077949|gb|EGI49155.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli H299]
Length = 576
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|332088690|gb|EGI93803.1| formate hydrogenlyase subunit 5 [Shigella dysenteriae 155-74]
Length = 483
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|15832831|ref|NP_311604.1| hydrogenase 3 large subunit [Escherichia coli O157:H7 str. Sakai]
gi|26249120|ref|NP_755160.1| formate hydrogenlyase subunit 5 [Escherichia coli CFT073]
gi|82545204|ref|YP_409151.1| large subunit of hydrogenase 3 [Shigella boydii Sb227]
gi|91212081|ref|YP_542067.1| formate hydrogenlyase subunit 5 [Escherichia coli UTI89]
gi|117624953|ref|YP_853941.1| hydrogenase 3, large subunit [Escherichia coli APEC O1]
gi|157158306|ref|YP_001464033.1| formate hydrogenlyase, subunit E [Escherichia coli E24377A]
gi|195938471|ref|ZP_03083853.1| hydrogenase 3, large subunit [Escherichia coli O157:H7 str. EC4024]
gi|208806994|ref|ZP_03249331.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4206]
gi|209920160|ref|YP_002294244.1| formate hydrogenlyase subunit [Escherichia coli SE11]
gi|215488037|ref|YP_002330468.1| hydrogenase 3, large subunit [Escherichia coli O127:H6 str.
E2348/69]
gi|218547771|ref|YP_002381562.1| hydrogenase 3, large subunit [Escherichia fergusonii ATCC 35469]
gi|218555265|ref|YP_002388178.1| hydrogenase 3, large subunit [Escherichia coli IAI1]
gi|218559711|ref|YP_002392624.1| hydrogenase 3, large subunit [Escherichia coli S88]
gi|218696315|ref|YP_002403982.1| hydrogenase 3, large subunit [Escherichia coli 55989]
gi|237706656|ref|ZP_04537137.1| formate hydrogenlyase subunit 5 [Escherichia sp. 3_2_53FAA]
gi|254794661|ref|YP_003079498.1| hydrogenase 3, large subunit [Escherichia coli O157:H7 str.
TW14359]
gi|256019500|ref|ZP_05433365.1| formate hydrogenlyase, subunit E [Shigella sp. D9]
gi|260845364|ref|YP_003223142.1| hydrogenase 3, large subunit [Escherichia coli O103:H2 str. 12009]
gi|260856828|ref|YP_003230719.1| hydrogenase 3, large subunit [Escherichia coli O26:H11 str. 11368]
gi|260869396|ref|YP_003235798.1| hydrogenase 3, large subunit [Escherichia coli O111:H- str. 11128]
gi|261226015|ref|ZP_05940296.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256727|ref|ZP_05949260.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
FRIK966]
gi|293449037|ref|ZP_06663458.1| hycE [Escherichia coli B088]
gi|306812401|ref|ZP_07446599.1| Formate hydrogenlyase, subunit E [Escherichia coli NC101]
gi|312965021|ref|ZP_07779261.1| formate hydrogenlyase subunit 5 [Escherichia coli 2362-75]
gi|26109527|gb|AAN81730.1|AE016765_132 Formate hydrogenlyase subunit 5 precursor [Escherichia coli CFT073]
gi|13363048|dbj|BAB37000.1| hydrogenase 3 large subunit [Escherichia coli O157:H7 str. Sakai]
gi|81246615|gb|ABB67323.1| large subunit of hydrogenase 3 [Shigella boydii Sb227]
gi|91073655|gb|ABE08536.1| formate hydrogenlyase subunit 5 precursor [Escherichia coli UTI89]
gi|115514077|gb|ABJ02152.1| hydrogenase 3, large subunit [Escherichia coli APEC O1]
gi|157080336|gb|ABV20044.1| formate hydrogenlyase, subunit E [Escherichia coli E24377A]
gi|208726795|gb|EDZ76396.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4206]
gi|209761888|gb|ACI79256.1| hydrogenase 3 large subunit [Escherichia coli]
gi|209761890|gb|ACI79257.1| hydrogenase 3 large subunit [Escherichia coli]
gi|209761892|gb|ACI79258.1| hydrogenase 3 large subunit [Escherichia coli]
gi|209761894|gb|ACI79259.1| hydrogenase 3 large subunit [Escherichia coli]
gi|209761896|gb|ACI79260.1| hydrogenase 3 large subunit [Escherichia coli]
gi|209913419|dbj|BAG78493.1| formate hydrogenlyase subunit [Escherichia coli SE11]
gi|215266109|emb|CAS10534.1| hydrogenase 3, large subunit [Escherichia coli O127:H6 str.
E2348/69]
gi|218353047|emb|CAU98872.1| hydrogenase 3, large subunit [Escherichia coli 55989]
gi|218355312|emb|CAQ87919.1| hydrogenase 3, large subunit [Escherichia fergusonii ATCC 35469]
gi|218362033|emb|CAQ99640.1| hydrogenase 3, large subunit [Escherichia coli IAI1]
gi|218366480|emb|CAR04232.1| hydrogenase 3, large subunit [Escherichia coli S88]
gi|222034415|emb|CAP77157.1| Formate hydrogenlyase subunit 5 [Escherichia coli LF82]
gi|226899696|gb|EEH85955.1| formate hydrogenlyase subunit 5 [Escherichia sp. 3_2_53FAA]
gi|254594061|gb|ACT73422.1| hydrogenase 3, large subunit [Escherichia coli O157:H7 str.
TW14359]
gi|257755477|dbj|BAI26979.1| hydrogenase 3, large subunit [Escherichia coli O26:H11 str. 11368]
gi|257760511|dbj|BAI32008.1| hydrogenase 3, large subunit [Escherichia coli O103:H2 str. 12009]
gi|257765752|dbj|BAI37247.1| hydrogenase 3, large subunit [Escherichia coli O111:H- str. 11128]
gi|281179724|dbj|BAI56054.1| formate hydrogenlyase subunit [Escherichia coli SE15]
gi|291322127|gb|EFE61556.1| hycE [Escherichia coli B088]
gi|305854439|gb|EFM54877.1| Formate hydrogenlyase, subunit E [Escherichia coli NC101]
gi|307554696|gb|ADN47471.1| formate hydrogenlyase subunit 5 precursor [Escherichia coli ABU
83972]
gi|307625708|gb|ADN70012.1| Formate hydrogenlyase, subunit E [Escherichia coli UM146]
gi|312290577|gb|EFR18457.1| formate hydrogenlyase subunit 5 [Escherichia coli 2362-75]
gi|312947250|gb|ADR28077.1| formate hydrogenlyase, subunit E [Escherichia coli O83:H1 str. NRG
857C]
gi|320645911|gb|EFX14892.1| Formate hydrogenlyase, subunit E [Escherichia coli O157:H- str.
493-89]
gi|320651211|gb|EFX19646.1| Formate hydrogenlyase, subunit E [Escherichia coli O157:H- str. H
2687]
gi|320656761|gb|EFX24649.1| Formate hydrogenlyase, subunit E [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662304|gb|EFX29701.1| Formate hydrogenlyase, subunit E [Escherichia coli O55:H7 str. USDA
5905]
gi|320667355|gb|EFX34313.1| Formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
LSU-61]
gi|323154937|gb|EFZ41129.1| formate hydrogenlyase subunit 5 [Escherichia coli EPECa14]
gi|323159851|gb|EFZ45822.1| formate hydrogenlyase subunit 5 [Escherichia coli E128010]
gi|323172991|gb|EFZ58622.1| formate hydrogenlyase subunit 5 [Escherichia coli LT-68]
gi|323180142|gb|EFZ65694.1| formate hydrogenlyase subunit 5 [Escherichia coli 1180]
gi|323183248|gb|EFZ68645.1| formate hydrogenlyase subunit 5 [Escherichia coli 1357]
gi|323188865|gb|EFZ74150.1| formate hydrogenlyase subunit 5 [Escherichia coli RN587/1]
gi|332091991|gb|EGI97069.1| formate hydrogenlyase subunit 5 [Shigella boydii 3594-74]
Length = 569
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|187776021|ref|ZP_02799754.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4196]
gi|188024943|ref|ZP_02774976.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4113]
gi|189009955|ref|ZP_02803710.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4076]
gi|189402140|ref|ZP_02780473.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4401]
gi|189403180|ref|ZP_02793819.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4486]
gi|189404214|ref|ZP_02787887.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4501]
gi|189405063|ref|ZP_02812983.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC869]
gi|189405921|ref|ZP_02825205.2| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC508]
gi|193065053|ref|ZP_03046128.1| formate hydrogenlyase, subunit E [Escherichia coli E22]
gi|193069658|ref|ZP_03050610.1| formate hydrogenlyase, subunit E [Escherichia coli E110019]
gi|194427826|ref|ZP_03060372.1| formate hydrogenlyase, subunit E [Escherichia coli B171]
gi|208814197|ref|ZP_03255526.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4045]
gi|208819490|ref|ZP_03259810.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4042]
gi|209400571|ref|YP_002272184.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4115]
gi|217327903|ref|ZP_03443986.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
TW14588]
gi|227888259|ref|ZP_04006064.1| formate hydrogenlyase, subunit E [Escherichia coli 83972]
gi|291284048|ref|YP_003500866.1| Formate hydrogenlyase, subunit E [Escherichia coli O55:H7 str.
CB9615]
gi|300815875|ref|ZP_07096099.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
107-1]
gi|300820496|ref|ZP_07100647.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
119-7]
gi|300906776|ref|ZP_07124458.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
84-1]
gi|300976819|ref|ZP_07173636.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
45-1]
gi|301049522|ref|ZP_07196480.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
185-1]
gi|301305388|ref|ZP_07211482.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
124-1]
gi|301326244|ref|ZP_07219627.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
78-1]
gi|331669454|ref|ZP_08370300.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA271]
gi|331678695|ref|ZP_08379369.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli H591]
gi|332280622|ref|ZP_08393035.1| hydrogenase 3 large subunit [Shigella sp. D9]
gi|187769658|gb|EDU33502.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4196]
gi|188015801|gb|EDU53923.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4113]
gi|189003368|gb|EDU72354.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4076]
gi|189357238|gb|EDU75657.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4401]
gi|189362108|gb|EDU80527.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4486]
gi|189366903|gb|EDU85319.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4501]
gi|189372181|gb|EDU90597.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC869]
gi|189377517|gb|EDU95933.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC508]
gi|192927350|gb|EDV81969.1| formate hydrogenlyase, subunit E [Escherichia coli E22]
gi|192957021|gb|EDV87472.1| formate hydrogenlyase, subunit E [Escherichia coli E110019]
gi|194414059|gb|EDX30335.1| formate hydrogenlyase, subunit E [Escherichia coli B171]
gi|208735474|gb|EDZ84161.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4045]
gi|208739613|gb|EDZ87295.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4042]
gi|209161971|gb|ACI39404.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
EC4115]
gi|217320270|gb|EEC28695.1| formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
TW14588]
gi|227834528|gb|EEJ44994.1| formate hydrogenlyase, subunit E [Escherichia coli 83972]
gi|290763921|gb|ADD57882.1| Formate hydrogenlyase, subunit E [Escherichia coli O55:H7 str.
CB9615]
gi|294491135|gb|ADE89891.1| formate hydrogenlyase, subunit E [Escherichia coli IHE3034]
gi|300298753|gb|EFJ55138.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
185-1]
gi|300401470|gb|EFJ85008.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
84-1]
gi|300410005|gb|EFJ93543.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
45-1]
gi|300526760|gb|EFK47829.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
119-7]
gi|300531804|gb|EFK52866.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
107-1]
gi|300839308|gb|EFK67068.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
124-1]
gi|300847089|gb|EFK74849.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
78-1]
gi|315254503|gb|EFU34471.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
85-1]
gi|315289282|gb|EFU48677.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
110-3]
gi|315293722|gb|EFU53074.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
153-1]
gi|315298791|gb|EFU58045.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
16-3]
gi|320189053|gb|EFW63712.1| Formate hydrogenlyase subunit 5 [Escherichia coli O157:H7 str.
EC1212]
gi|320202371|gb|EFW76941.1| Formate hydrogenlyase subunit 5 [Escherichia coli EC4100B]
gi|323946398|gb|EGB42426.1| respiratory-chain NADH dehydrogenase [Escherichia coli H120]
gi|323957067|gb|EGB52792.1| respiratory-chain NADH dehydrogenase [Escherichia coli H263]
gi|324005683|gb|EGB74902.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
57-2]
gi|324017034|gb|EGB86253.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
117-3]
gi|324111346|gb|EGC05328.1| respiratory-chain NADH dehydrogenase [Escherichia fergusonii B253]
gi|324119971|gb|EGC13849.1| respiratory-chain NADH dehydrogenase [Escherichia coli E1167]
gi|326339207|gb|EGD63022.1| Formate hydrogenlyase subunit 5 [Escherichia coli O157:H7 str.
1044]
gi|326342910|gb|EGD66678.1| Formate hydrogenlyase subunit 5 [Escherichia coli O157:H7 str.
1125]
gi|331063122|gb|EGI35035.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli TA271]
gi|331073525|gb|EGI44846.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli H591]
gi|332102974|gb|EGJ06320.1| hydrogenase 3 large subunit [Shigella sp. D9]
Length = 576
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|330508772|ref|YP_004385200.1| F420H2 dehydrogenase subunit D [Methanosaeta concilii GP-6]
gi|328929580|gb|AEB69382.1| F420H2 dehydrogenase, subunit D [Methanosaeta concilii GP-6]
Length = 570
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ ++ I ++F +V + L + VD + +C ++ D F +
Sbjct: 1 MTNASEVLSSIQSAFPAAVSDGKVESDDRLWVTVDSKKIRDVCKYMTD--KLGFDHYAGS 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDM 119
GVD+++R+ V +N +K+ +V +Y A+W+ERE W+M
Sbjct: 59 AGVDWIARNEMEVVEIMASYGIHNVVAMLKVKTPRDNPSVPSLVDMYWNANWYERETWEM 118
Query: 120 YGIFFEGHPDLRRILTDYGFEG-HPLRKDF 148
+GI FEGHP+L +L G P RKDF
Sbjct: 119 FGINFEGHPELYPLLLSDPLVGVWPWRKDF 148
>gi|331654198|ref|ZP_08355198.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli M718]
gi|331047580|gb|EGI19657.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli M718]
Length = 576
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|256371182|ref|YP_003109006.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Acidimicrobium
ferrooxidans DSM 10331]
gi|256007766|gb|ACU53333.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Acidimicrobium
ferrooxidans DSM 10331]
Length = 146
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS----------RSNRFDVVYHFLSPK 82
V D + LR D FV + DL VD+L RF+VV
Sbjct: 7 HVAREDWLETAEGLRAD---GFVMLADLTCVDYLEGVREDLPEEVVRERFEVVAVLRRMD 63
Query: 83 YNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+R++ V + V + +YPG + FEREV+D++GI F GHPDL RIL +EG
Sbjct: 64 PPAMVRLRAQVPDDDPVIDSLWSVYPGVEAFEREVFDLFGIHFRGHPDLSRILMPEDWEG 123
Query: 142 HPLRKDFPVTG----FVELH 157
HPLRKD+ V F E+
Sbjct: 124 HPLRKDYGVGRVAVQFKEVR 143
>gi|194476963|ref|YP_002049142.1| NADH dehydrogenase subunit J [Paulinella chromatophora]
gi|218527862|sp|B1X4R3|NDHJ_PAUCH RecName: Full=NAD(P)H-quinone oxidoreductase subunit J, organellar
chromatophore; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|171191970|gb|ACB42932.1| NADH dehydrogenase subunit J [Paulinella chromatophora]
Length = 192
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF------------- 78
+ V+ +L + L+ + F + G D +
Sbjct: 50 IGVEPSELQKIAEALKSN---GFDYLQCQGGYDEGPGGRLVSFYHLIKLGTIADHYLTPN 106
Query: 79 ----LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
S RL+V + SVPS+ I+ G+DW ERE +DM+GI +EGHP +R+L
Sbjct: 107 TLPPNSILKEVRLKVFLLRDGNLSVPSLYSIFRGSDWQERETFDMFGISYEGHPHPKRLL 166
Query: 135 TDYGFEGHPLRKDFPVTGFVELH 157
++G+PLRKD+ F E+
Sbjct: 167 MPEDWKGYPLRKDYIQPDFYEMQ 189
>gi|83591009|ref|YP_431018.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Moorella
thermoacetica ATCC 39073]
gi|83573923|gb|ABC20475.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Moorella
thermoacetica ATCC 39073]
Length = 574
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 26/185 (14%)
Query: 2 VRKIEDLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++ + + + F G++ + + ++++ V DL + L + + +
Sbjct: 7 SKRAQKYIKDLRSKFPGAILEESSQAPDQITVTVKLNDLPGIVEELYYRHN---GWLSTM 63
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV-------AEGKSVPSIVGIYPGADWFE 113
G D + F + Y S + N R + + PS+ P A W+E
Sbjct: 64 LGNDERELNGCFALYYVL-SMEGNSNKRENTWITVKALVPEKEPQFPSVTPRVPAAVWYE 122
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
REV DM+G+ G PD RR++ + HPLRKD ++ Y PVE
Sbjct: 123 REVRDMFGLEPVGIPDARRLVLPDDWPDNLHPLRKD-----AMDYRYRP-------EPVE 170
Query: 172 LMQEH 176
Sbjct: 171 ENYNF 175
>gi|57234305|ref|YP_181650.1| proton-translocating NADH-quinone oxidoreductase, C subunit
[Dehalococcoides ethenogenes 195]
gi|57224753|gb|AAW39810.1| proton-translocating NADH-quinone oxidoreductase, C subunit
[Dehalococcoides ethenogenes 195]
Length = 148
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 1 MVRKI--EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M + + L + G A +S L D+ +C +L P +
Sbjct: 1 MTAVLDYQQLKADLSKELPGIEIQAESSF----LLALPEDIHHVCQYLVSRP-LQMDYLT 55
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
+L D+ + ++ L+ ++ + S+V I+ GA+ ERE++D
Sbjct: 56 NLTAADYPEYIEIIFHLNSIVNNTAMT-LKTRLTDKTNPKMASVVDIWRGAELQEREIYD 114
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
++G+ FE H L+RI GFEG+PLRKDF
Sbjct: 115 LFGVVFENHIGLKRIFLWEGFEGYPLRKDF 144
>gi|320640364|gb|EFX09903.1| Formate hydrogenlyase, subunit E [Escherichia coli O157:H7 str.
G5101]
Length = 569
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|300919243|ref|ZP_07135766.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
115-1]
gi|300413688|gb|EFJ96998.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
115-1]
Length = 576
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|191166762|ref|ZP_03028588.1| formate hydrogenlyase, subunit E [Escherichia coli B7A]
gi|309795181|ref|ZP_07689600.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
145-7]
gi|190903133|gb|EDV62856.1| formate hydrogenlyase, subunit E [Escherichia coli B7A]
gi|308121152|gb|EFO58414.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
145-7]
Length = 576
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|88808081|ref|ZP_01123592.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 7805]
gi|88788120|gb|EAR19276.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 7805]
Length = 182
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK--------- 82
+ V+ L + + L+ F + G D + +
Sbjct: 48 IAVEALFLPVIAAALKSH---GFDYLQCQGGYDEGPGERLVCFYHLLAMAEVTEGGANQV 104
Query: 83 YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
RL+V ++ SVPS+ G++ GADW ERE +DM+GI FEGHP +R+L + G
Sbjct: 105 REVRLKVFLSREGQPSVPSLYGLFRGADWQERETFDMFGIQFEGHPHPKRLLMPEDWTGW 164
Query: 143 PLRKDFPVTGFVELH 157
PLRKD+ F E+
Sbjct: 165 PLRKDYVQPDFYEMQ 179
>gi|331648439|ref|ZP_08349527.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli M605]
gi|330908752|gb|EGH37266.1| formate hydrogenlyase subunit 5 [Escherichia coli AA86]
gi|331042186|gb|EGI14328.1| formate hydrogenlyase subunit 5 (FHL subunit 5)(Hydrogenase-3
component E) [Escherichia coli M605]
Length = 576
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|300922239|ref|ZP_07138365.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
182-1]
gi|300421369|gb|EFK04680.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
182-1]
Length = 576
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|16330877|ref|NP_441605.1| NADH dehydrogenase subunit J [Synechocystis sp. PCC 6803]
gi|20141511|sp|P19125|NDHJ_SYNY3 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J; AltName:
Full=ORF 155
gi|1653371|dbj|BAA18285.1| NADH dehydrogenase subunit I [Synechocystis sp. PCC 6803]
Length = 179
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR----L 87
+ V+ L+ LC+ L F + D YH + + R +
Sbjct: 50 VQVEADLLLPLCTAL---YAYGFNYLQCQGAYDE-GPGKSLVSFYHLVKLTEDTRNPEEV 105
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ + V + I+ ADW ERE +DM+GI +EGHP+L+RIL + G PLRK
Sbjct: 106 RLKVFLPRENPVVPSVYWIWKAADWQERECYDMFGIVYEGHPNLKRILMPEDWVGWPLRK 165
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 166 DYISPDFYELQ 176
>gi|332087442|gb|EGI92570.1| formate hydrogenlyase subunit 5 [Shigella boydii 5216-82]
Length = 569
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLAHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|260768585|ref|ZP_05877519.1| hydrogenase 4 subunit [Vibrio furnissii CIP 102972]
gi|260616615|gb|EEX41800.1| hydrogenase 4 subunit [Vibrio furnissii CIP 102972]
Length = 581
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 77/209 (36%), Gaps = 34/209 (16%)
Query: 1 MVRKIEDLGDY-------IVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHC 52
M + + L +V F ++ ++++ V LV + +L D
Sbjct: 4 MNTQNDALAKTGKHYLAGLVQKFPSAILEEEWQTNTQVTITVKMTSLVEVMQWLYYDQG- 62
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGA 109
+ G D S + F V + S + + + + V + SI P A
Sbjct: 63 --GWLTVSFGNDERSINGHFAVYHAL-SMEGVEKCWITVKVLVDANSQEFISITPTIPAA 119
Query: 110 DWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD--------FPVTG-----FV 154
W ERE+ DM+G+ G PD RR++ + HPLRKD P T F+
Sbjct: 120 VWGEREIRDMFGLRPVGLPDERRLILPDDWPENLHPLRKDAMDYRQRPQPTTDTETYPFI 179
Query: 155 ELHYDDKVKKVVYRPVELMQE----HRDY 179
DD + V P+ + + R +
Sbjct: 180 NERGDDSNRIVPVGPMHITSDEPGHFRLF 208
>gi|320449688|ref|YP_004201784.1| NADH-quinone oxidoreductase subunit C [Thermus scotoductus SA-01]
gi|320149857|gb|ADW21235.1| NADH-quinone oxidoreductase, subunit C [Thermus scotoductus SA-01]
Length = 206
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
L + + + N +G L + + F + D+ G+D+L
Sbjct: 3 LNRVLEEAQAKGYTIEDNGLGNLWVVMPREAFKEEMV---RYKALGFNYLADIVGLDYLE 59
Query: 68 RSN---------RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVW 117
+ V R V++ V E + ++ A++ EREV+
Sbjct: 60 YPDPRPERFAVVYELVSLPGWQDGDGSRFFVRVYVPEKDPRLPTVTDLWGSANFLEREVY 119
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
D++GI FEGHPDLR+ILT EGHPLRKDFP+
Sbjct: 120 DLFGIVFEGHPDLRKILTPEDLEGHPLRKDFPL 152
>gi|186685598|ref|YP_001868794.1| NADH dehydrogenase subunit J [Nostoc punctiforme PCC 73102]
gi|218527855|sp|B2J6S5|NDHJ_NOSP7 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|186468050|gb|ACC83851.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Nostoc punctiforme
PCC 73102]
Length = 176
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYN 84
+ G + V L+ + L F + G+D + + +
Sbjct: 40 DKNGVEIIKVSADFLLPTATAL---YAYGFNYLQCQGGIDLGPGQELVSMYHLIKVGDNS 96
Query: 85 RR---LRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
R +RVK+ + V + I+ ADW ERE +DM+GI +EGHP+L+R+L +
Sbjct: 97 DRPEEVRVKVFLPRENPVVPSVYWIWKTADWQERESYDMFGIIYEGHPNLKRLLMPEDWV 156
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F EL
Sbjct: 157 GWPLRKDYISPDFYELQ 173
>gi|315427039|dbj|BAJ48656.1| NADH dehydrogenase I subunit C [Candidatus Caldiarchaeum
subterraneum]
Length = 161
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELS-LDVDCGDLVSLCSFLRDDPHCCF-VNII 58
M + + + N F ++ +L + VD LV++ FLRD+ +
Sbjct: 1 MSETVLTVVQELENKFGKALLEKAVDTRKLVKIVVDAASLVAVARFLRDNYGLDHVKAVT 60
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG-----KSVPSIVGIYPGADWFE 113
+ L + ++ +++YH S IA++ +PS++ ++P ++ E
Sbjct: 61 GVDLSRLLKKEDKIEIIYHLGSYTRPELATADIALSTKLDKKSPRMPSLIDVWPSVEFHE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTG 152
REV++M+G+ FEGHPDLRR+L + P+ K++ G
Sbjct: 121 REVYEMFGVVFEGHPDLRRLLLPEYWSDIPPMLKEYEPPG 160
>gi|78778679|ref|YP_396791.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9312]
gi|78712178|gb|ABB49355.1| NADH dehydrogenase subunit C [Prochlorococcus marinus str. MIT
9312]
Length = 176
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + + +G ++ E ++ V+ L S L + F +
Sbjct: 20 MSQNLSKVG------IPNQPLDYDHAGIE-NISVEPSKLYEAVSAL---TNYGFNYLQCQ 69
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNR-------RLRVKIAVAEGKSVPSIVGIYPGADWFE 113
G D N + ++ RL+V + S+PS+ I+ G+DW E
Sbjct: 70 GGYDEGPGKNLVSFYHFITVDDLHKIEKIQEVRLKVFLKRDSDLSIPSLYKIFKGSDWQE 129
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
RE +DM+GI F HP+ +R+L + G PLRKD+ F EL
Sbjct: 130 RETYDMFGINFIDHPNPKRLLMPEDWRGWPLRKDYIQPDFYELQ 173
>gi|150004311|ref|YP_001299055.1| NADH dehydrogenase I, chain D [Bacteroides vulgatus ATCC 8482]
gi|254883414|ref|ZP_05256124.1| NADH dehydrogenase subunit I [Bacteroides sp. 4_3_47FAA]
gi|294776878|ref|ZP_06742341.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
vulgatus PC510]
gi|319644246|ref|ZP_07998759.1| NADH dehydrogenase subunit I [Bacteroides sp. 3_1_40A]
gi|218534453|sp|A6L169|NUOD_BACV8 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|149932735|gb|ABR39433.1| NADH dehydrogenase I, chain D [Bacteroides vulgatus ATCC 8482]
gi|254836207|gb|EET16516.1| NADH dehydrogenase subunit I [Bacteroides sp. 4_3_47FAA]
gi|294449354|gb|EFG17891.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
vulgatus PC510]
gi|317384237|gb|EFV65209.1| NADH dehydrogenase subunit I [Bacteroides sp. 3_1_40A]
Length = 519
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ L LR H F + L G+D+ + + N + +
Sbjct: 5 IEIPAEKLHEEMLKLRQGKHMDF--LRSLTGMDWGEEGLGVVYHLEDTNTRENIVVSTRT 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF--- 148
E +PS+ I+ GA++ EREV+D YGI F GHPD+RR+ + G+PLRKD+
Sbjct: 63 TNREKPELPSVSDIWKGAEFNEREVYDYYGIRFIGHPDMRRLFLRDDWVGYPLRKDYDES 122
Query: 149 --PVTGFVELHYDDKVKKVVYRPVELMQ 174
P+ E PV+ Q
Sbjct: 123 LNPLRMTNE------------EPVDTTQ 138
>gi|159026400|emb|CAO88929.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 167
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ V+ L+ L + L F + D + + +R
Sbjct: 38 IKVEPEFLIPLATAL---FAYGFNYLQCQGAYDLGPGKELVSFYHLVKVTDNVDSPVEVR 94
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ + V S+ I+ ADW ERE +DM+GI +EGHP L+RIL + G PLRKD
Sbjct: 95 LKVFLPRDNPRVASVYWIWKAADWQERESYDMFGIIYEGHPHLKRILMPEDWVGWPLRKD 154
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 155 YVSPEFYELQ 164
>gi|315180294|gb|ADT87208.1| hydrogenase-4 component G [Vibrio furnissii NCTC 11218]
Length = 581
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 77/209 (36%), Gaps = 34/209 (16%)
Query: 1 MVRKIEDLGDY-------IVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHC 52
M + + L +V F ++ ++++ V LV + +L D
Sbjct: 4 MNTQNDALAKTGKHYLAGLVQKFPNAILEEEWQTNTQVTITVKMTSLVEVMQWLYYDQG- 62
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGA 109
+ G D S + F V + S + + + + V + SI P A
Sbjct: 63 --GWLTVSFGNDERSINGHFAVYHAL-SMEGVEKCWITVKVLVDANSQEFISITPTIPAA 119
Query: 110 DWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD--------FPVTG-----FV 154
W ERE+ DM+G+ G PD RR++ + HPLRKD P T F+
Sbjct: 120 VWGEREIRDMFGLRPVGLPDERRLILPDDWPENLHPLRKDAMDYRQRPQPTTDTETYPFI 179
Query: 155 ELHYDDKVKKVVYRPVELMQE----HRDY 179
DD + V P+ + + R +
Sbjct: 180 NERGDDSNRIVPVGPMHITSDEPGHFRLF 208
>gi|254415263|ref|ZP_05029025.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196178069|gb|EDX73071.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 178
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP---KYNRRL 87
+ V L+ + + L F + G D + + +
Sbjct: 48 VIKVQPEVLIPVATAL---YAYGFNYLQCQGGYDVGPGEELVSFYHLIKISDDAEQPEEV 104
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
RVK+ + + I+ ADW ERE +DM+GI +EGHP+L+RIL + G PLRK
Sbjct: 105 RVKVFLPRENPSVPSVYWIWKSADWQERETYDMFGIVYEGHPNLKRILMPEDWVGWPLRK 164
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 165 DYISPDFYELQ 175
>gi|300713006|ref|YP_003738818.1| NADH dehydrogenase-like complex subunit CD [Halalkalicoccus
jeotgali B3]
gi|299126690|gb|ADJ17027.1| NADH dehydrogenase-like complex subunit CD [Halalkalicoccus
jeotgali B3]
Length = 548
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 14/162 (8%)
Query: 6 EDLGDYIVNSFSG-SVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ L D + ++ + ++ + + + S R + + + +
Sbjct: 10 DRLIDKAATALPSEAIIDRESHENAPAVVIRADQVRRVLSTFRSEAGL--DHCSCVTAQE 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ R + + + + V + S V +Y A+W ERE +D+ GI +
Sbjct: 68 YEDRFETVYHLTSYDNRTCELSVIVPT-TKDNPVSESAVPVYRTAEWHEREAYDLLGIEY 126
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV 166
E HPDLRRIL ++GHPLR + YD ++V
Sbjct: 127 EDHPDLRRILLPETWQGHPLR----------MAYDQNQPQIV 158
>gi|227830778|ref|YP_002832558.1| NADH dehydrogenase subunit C [Sulfolobus islandicus L.S.2.15]
gi|229579674|ref|YP_002838073.1| NADH dehydrogenase subunit C [Sulfolobus islandicus Y.G.57.14]
gi|238620271|ref|YP_002915097.1| NADH dehydrogenase subunit C [Sulfolobus islandicus M.16.4]
gi|227457226|gb|ACP35913.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
L.S.2.15]
gi|228010389|gb|ACP46151.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
Y.G.57.14]
gi|238381341|gb|ACR42429.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
M.16.4]
gi|323475132|gb|ADX85738.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
REY15A]
gi|323477864|gb|ADX83102.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
HVE10/4]
Length = 164
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDL-VSLCSFLRDDPHCCFVNIID 59
M ++ L + + F + + + +++ V + + + L+ + F ++
Sbjct: 1 MSEALKSLINDLQTKF--KCQAKIENDRRITVIVPDKKIMKDVANHLK---NFGFDHVKA 55
Query: 60 LCGVDFLSRSNRFDVVYHF-LSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFERE 115
+ G+D+ + V + S ++ + + + + S+PS+ I+ A ERE
Sbjct: 56 VTGIDYPEQEKLEVVYHISSYSNLDLAKIILALRITVTYKDPSLPSLYSIFESAWTGERE 115
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
++M GI FEGHPDLRR D FEG +PLRK F +
Sbjct: 116 TYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSFKIK 152
>gi|15616776|ref|NP_239988.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
gi|11133959|sp|P57254|NUOCD_BUCAI RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|25285224|pir||B84948 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain C / D
[imported] - Buchnera sp. (strain APS)
gi|10038839|dbj|BAB12874.1| NADH dehydrogenase I chain C / D [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 600
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-------RSNRFDVVYHFLS 80
G + +D L+ + FL ++ + DL GVD F V YH +S
Sbjct: 46 GFPIIWIDKTLLIEVGKFL-YHLSQPYIMLYDLHGVDERIRLHREDLPKADFSVFYHLIS 104
Query: 81 PKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ N + +K+ + E + G++P A+W+ERE WDM+GI F HP+L RI+ +
Sbjct: 105 IERNSDIMIKVPLLENDLILPTFTGLFPNANWYERETWDMFGIIFNNHPNLTRIIMPSTW 164
Query: 140 EGHPLRKDF 148
+GHPLRK++
Sbjct: 165 KGHPLRKNY 173
>gi|167764931|ref|ZP_02437052.1| hypothetical protein BACSTE_03323 [Bacteroides stercoris ATCC
43183]
gi|167697600|gb|EDS14179.1| hypothetical protein BACSTE_03323 [Bacteroides stercoris ATCC
43183]
Length = 536
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF---------LSRSNRFDVVYHFLSPKY 83
++ L LR + F + L G+D+ VVY S
Sbjct: 11 YIEPAALHDEMLRLRQEEQMDF--LECLTGMDWGEPDAAKDTPDTPRGLGVVYQLESTVT 68
Query: 84 NRR--LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+R +R E +PS+ I+ AD+ EREV+D YG+ F GHPD+RR+ + G
Sbjct: 69 GKRTAIRTATLNREHPELPSVCDIWKAADFLEREVFDFYGVVFVGHPDMRRLYLRNDWVG 128
Query: 142 HPLRKDFPVTGFVELHYDDKV 162
HP+RKD L D++
Sbjct: 129 HPMRKDDDPEAQNPLRMDNEE 149
>gi|229585310|ref|YP_002843812.1| NADH dehydrogenase subunit C [Sulfolobus islandicus M.16.27]
gi|228020360|gb|ACP55767.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
M.16.27]
Length = 164
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDL-VSLCSFLRDDPHCCFVNIID 59
M ++ L + + F + + + +++ V + + + L+ + F ++
Sbjct: 1 MSEALKSLINDLQTKF--KCQAKIENDRRITVIVPDKKIMKDVANHLK---NFGFDHVKA 55
Query: 60 LCGVDFLSRSNRFDVVYHF-LSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFERE 115
+ G+DF + V + S ++ + + +A + S+PS+ I+ A ERE
Sbjct: 56 VTGIDFPEQEKLEVVYHISSYSNLDLAKIILALRIAVTYKDPSLPSLYSIFESAWTGERE 115
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
++M GI FEGHPDLRR D FEG +PLRK F +
Sbjct: 116 TYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSFKIK 152
>gi|161502106|ref|YP_001569218.1| hypothetical protein SARI_00123 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160863453|gb|ABX20076.1| hypothetical protein SARI_00123 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 569
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y +S + R V + V PS+ A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYY-VMSMEQGTRCWVTVRVEVDPNKPEYPSVTPRVSAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|284054938|ref|ZP_06385148.1| NADH dehydrogenase subunit J [Arthrospira platensis str. Paraca]
gi|291566380|dbj|BAI88652.1| NADH dehydrogenase subunit J [Arthrospira platensis NIES-39]
Length = 169
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ VD L+ L + L F + C D + + + + +
Sbjct: 40 IKVDRDYLIPLATAL---YAYGFNYLRCQCAYDMGPGEDLVSTYHLAKVGDNVEQLEEVC 96
Query: 89 VKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
VK+ V VPS+ I+ AD+ ERE +DMYGI +EGHP+L+RIL + G PLRKD
Sbjct: 97 VKVFVPRSDPKVPSVYWIWKAADFQERESYDMYGIVYEGHPNLKRILMPEDWIGWPLRKD 156
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 157 YISPEFHELQ 166
>gi|219682087|ref|YP_002468471.1| NADH dehydrogenase I chain C/D [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|254767802|sp|B8D761|NUOCD_BUCAT RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|219621820|gb|ACL29976.1| NADH dehydrogenase I chain C/D [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311085898|gb|ADP65980.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311087052|gb|ADP67132.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. JF99 (Acyrthosiphon pisum)]
gi|311087611|gb|ADP67690.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. JF98 (Acyrthosiphon pisum)]
Length = 600
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-------RSNRFDVVYHFLS 80
G + +D L+ + FL ++ + DL GVD F V YH +S
Sbjct: 46 GFPIIWIDKTLLIEVGKFL-YHLSQPYIMLYDLHGVDERIRLHREDLPKADFSVFYHLIS 104
Query: 81 PKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ N + +K+ + E + G++P A+W+ERE WDM+GI F HP+L RI+ +
Sbjct: 105 IERNSDIMIKVPLLENDLILPTFTGLFPNANWYERETWDMFGIIFNNHPNLTRIIMPSTW 164
Query: 140 EGHPLRKDF 148
+GHPLRK++
Sbjct: 165 KGHPLRKNY 173
>gi|91069906|gb|ABE10835.1| putative respiratory-chain NADH dehydrogenase subunit [uncultured
Prochlorococcus marinus clone ASNC2150]
Length = 176
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR------ 85
+ V+ L S L+ + F + G D N + R
Sbjct: 44 ISVEPNKLYEAVSALK---NYGFNYLQCQGGYDEGPGKNLVSFYHFITVDDLQRIEKIKE 100
Query: 86 -RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RL+V + S+PS+ I+ G+DW ERE +DMYGI F HP+ +R+L + G PL
Sbjct: 101 VRLKVFLKRDSDLSIPSLYKIFKGSDWQERETFDMYGINFIDHPNPKRLLMPEDWRGWPL 160
Query: 145 RKDFPVTGFVELH 157
RKD+ F EL
Sbjct: 161 RKDYIQPDFYELQ 173
>gi|254525600|ref|ZP_05137652.1| NADH dehydrogenase i chain j [Prochlorococcus marinus str. MIT
9202]
gi|221537024|gb|EEE39477.1| NADH dehydrogenase i chain j [Prochlorococcus marinus str. MIT
9202]
Length = 176
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR------ 85
+ V+ L S LR + F + G D N + + +
Sbjct: 44 ISVEPNKLYEAVSTLR---NYGFNYLQCQGGYDEGPGKNLVSFYHFITVDDFQKIEKLKE 100
Query: 86 -RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RL+V + S+PS+ I+ G+DW ERE +DMYGI F HP+ R+L + G PL
Sbjct: 101 VRLKVFLKRDSDLSIPSLYKIFKGSDWQERETYDMYGINFIDHPNPTRLLMPEDWRGWPL 160
Query: 145 RKDFPVTGFVELH 157
RKD+ F EL
Sbjct: 161 RKDYIQPDFYELQ 173
>gi|219681531|ref|YP_002467916.1| NADH dehydrogenase I chain C/D [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471212|ref|ZP_05635211.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|254767801|sp|B8D8V7|NUOCD_BUCA5 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|219624374|gb|ACL30529.1| NADH dehydrogenase I chain C/D [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 600
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-------RSNRFDVVYHFLS 80
G + +D L+ + FL ++ + DL GVD F V YH +S
Sbjct: 46 GFPIIWIDKTLLIEVGKFL-YHLSQPYIMLYDLHGVDERIRLHREDLPKADFSVFYHLIS 104
Query: 81 PKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ N + +K+ + E + G++P A+W+ERE WDM+GI F HP+L RI+ +
Sbjct: 105 IERNSDIMIKVPLLENDLILPTFTGLFPNANWYERETWDMFGIIFNNHPNLTRIIMPSTW 164
Query: 140 EGHPLRKDF 148
+GHPLRK++
Sbjct: 165 KGHPLRKNY 173
>gi|67925383|ref|ZP_00518733.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Crocosphaera
watsonii WH 8501]
gi|67852779|gb|EAM48188.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Crocosphaera
watsonii WH 8501]
Length = 177
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ V L+ L + L F + D + + +R
Sbjct: 48 VKVSPDFLIPLSTAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLVKVTDNCDKPEEVR 104
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V +PS+ I+ ADW ERE +DMYGI ++GHPDL+RIL + G PLRKD
Sbjct: 105 LKVFVPRDNPHIPSVYWIWKAADWQERESYDMYGIIYDGHPDLKRILMPEDWVGWPLRKD 164
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 165 YVSPDFYELQ 174
>gi|119491044|ref|ZP_01623202.1| NADH dehydrogenase subunit J [Lyngbya sp. PCC 8106]
gi|119453589|gb|EAW34749.1| NADH dehydrogenase subunit J [Lyngbya sp. PCC 8106]
Length = 168
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ V L+ L + L + F + C D + V + + + +
Sbjct: 38 IIKVSRDYLIPLSTALYAN---GFNYLRCQCAYDLGPSEDLVSVYHLVKVDDNVEQPEEV 94
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
VK+ V VPS+ I+ AD+ ERE +DMYGI +EGHP+L+RIL + G PLRK
Sbjct: 95 CVKVFVPRNDPKVPSVYWIWKAADFQERESYDMYGIVYEGHPNLKRILMPEDWVGWPLRK 154
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 155 DYISPDFHELQ 165
>gi|283786729|ref|YP_003366594.1| formate hydrogenlyase subunit 5 [Citrobacter rodentium ICC168]
gi|282950183|emb|CBG89819.1| formate hydrogenlyase subunit 5 [Citrobacter rodentium ICC168]
Length = 569
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALHEAFPGVVLDEAWQTRDQLTITVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + ++ + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGQKCWITVRVEVDPNKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|330997244|ref|ZP_08321097.1| respiratory-chain NADH dehydrogenase, subunit [Paraprevotella
xylaniphila YIT 11841]
gi|329571039|gb|EGG52746.1| respiratory-chain NADH dehydrogenase, subunit [Paraprevotella
xylaniphila YIT 11841]
Length = 538
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR--LR 88
+ V GD+ +C L DD + DL D R V Y S + R LR
Sbjct: 22 VVVVPKGDVAEVCRRLHDDAEEPMDYMRDLVAADG---DGRLSVFYLLESTRTGGRVTLR 78
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
E +PS+ I+ A+ ERE +D +GI F GHPD+RR+ + G+PL KD+
Sbjct: 79 TDTDGREEPFLPSVCRIWKTAEIKEREAYDFFGIRFTGHPDMRRLYLREDWAGYPLLKDY 138
Query: 149 -----PVTGFVELHYD 159
P+ E++ D
Sbjct: 139 DMGSNPLNMENEVNAD 154
>gi|257387966|ref|YP_003177739.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halomicrobium
mukohataei DSM 12286]
gi|257170273|gb|ACV48032.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halomicrobium
mukohataei DSM 12286]
Length = 560
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 11/161 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D I V + V + D+ ++ S L+ F + ++ R
Sbjct: 24 DQIEALIDDYVIGRESHVNAEGFVIRPDDVQAVLSTLK--TEAGFDFCSCVTAQEYQDRY 81
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
+ + P + V + S +Y ADW ERE +D+ GI ++ HPD
Sbjct: 82 ESIYHLKKYDDPTQEVSVVVPSP-RDDPHNQSGADVYETADWHEREAYDLVGIEYDDHPD 140
Query: 130 LRRILTDYGFEGHPLRKDF--------PVTGFVELHYDDKV 162
LRRIL ++GHPL D+ P+ DDK
Sbjct: 141 LRRILLPETWQGHPLSLDYNQDKPQIVPLREHANPLQDDKQ 181
>gi|229581660|ref|YP_002840059.1| NADH dehydrogenase subunit C [Sulfolobus islandicus Y.N.15.51]
gi|228012376|gb|ACP48137.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
Y.N.15.51]
Length = 164
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDL-VSLCSFLRDDPHCCFVNIID 59
M ++ L + + F + + + +++ V + + + L+ + F ++
Sbjct: 1 MSEALKSLINDLQTKF--KCQAKIENDRRITVIVPDKKIMKDVANHLK---NFGFDHVKA 55
Query: 60 LCGVDFLSRSNRFDVVYHF-LSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFERE 115
+ G+D+ + V + S ++ + + + + S+PS+ I+ A ERE
Sbjct: 56 VTGIDYPEQEKLEVVYHISSYSNLDLAKIILALRITVTYKDPSLPSLYSIFESAWIGERE 115
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
++M GI FEGHPDLRR D FEG +PLRK F +
Sbjct: 116 TYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSFKIK 152
>gi|301645299|ref|ZP_07245249.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
146-1]
gi|301076417|gb|EFK91223.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
146-1]
Length = 576
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ GA W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPPGSGAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|581792|emb|CAA35486.1| unnamed protein product [Synechocystis sp. PCC 6803]
Length = 157
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR----L 87
+ V+ L+ LC+ L F + D YH + + R +
Sbjct: 28 VQVEADLLLPLCTAL---YAYGFNYLQCQGAYDE-GPGKSLVSFYHLVKLTEDTRNPEEV 83
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ + V + I+ ADW ERE +DM+GI +EGHP+L+RIL + G PLRK
Sbjct: 84 RLKVFLPRENPVVPSVYWIWKAADWQERECYDMFGIVYEGHPNLKRILMPEDWVGWPLRK 143
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 144 DYISPDFYELQ 154
>gi|146739155|gb|ABQ42614.1| HycE [Enterobacter aerogenes]
Length = 522
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHQAFPGVVLDEAWQTKDQLTVTVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + R + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEQGTRCWITVRVEVDADKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|166363919|ref|YP_001656192.1| NADH dehydrogenase subunit J [Microcystis aeruginosa NIES-843]
gi|218527853|sp|B0JSV6|NDHJ_MICAN RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|166086292|dbj|BAG01000.1| NADH dehydrogenase subunit [Microcystis aeruginosa NIES-843]
Length = 167
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ V+ L+ L + L F + D + + +R
Sbjct: 38 IKVEADFLIPLATAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLVKVTDNVDSPVEVR 94
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ + V S+ I+ ADW ERE +DM+GI +EGHP L+RIL + G PLRKD
Sbjct: 95 LKVFLPRDNPRVASVYWIWKAADWQERESYDMFGIIYEGHPHLKRILMPEDWVGWPLRKD 154
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 155 YVSPEFYELQ 164
>gi|15922545|ref|NP_378214.1| NADH dehydrogenase subunit C [Sulfolobus tokodaii str. 7]
gi|15623335|dbj|BAB67323.1| 168aa long hypothetical NADH-plastoquinone oxidoreductase subunit 5
[Sulfolobus tokodaii str. 7]
Length = 168
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGS--VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M + ++ + + I + V V S S+ VD +V + FL+ F ++
Sbjct: 4 MAQTVQSILNSIFSQVQSKFKVTGKVESDKRASIQVDKSQIVEVAGFLK---SLGFDHVK 60
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-----EGKSVPSIVGIYPGADWFE 113
+ +D+ + F+VVYH S + +A+ + +PS+ I+ E
Sbjct: 61 SVTAIDYPD-AQEFEVVYHISSYSNIDLAKTIVALRTRVKYDDPKLPSLYKIWESVWTGE 119
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
RE ++MYGI F+GHPDLRR+ FEG +P+RK + +
Sbjct: 120 RETYEMYGIIFDGHPDLRRLFLPEDFEGVYPMRKSYKIK 158
>gi|15789835|ref|NP_279659.1| NADH dehydrogenase/oxidoreductase [Halobacterium sp. NRC-1]
gi|169235556|ref|YP_001688756.1| NADH dehydrogenase-like complex subunit Cd [Halobacterium salinarum
R1]
gi|10580227|gb|AAG19139.1| NADH dehydrogenase/oxidoreductase [Halobacterium sp. NRC-1]
gi|167726622|emb|CAP13407.1| NADH dehydrogenase-like complex subunit CD [Halobacterium salinarum
R1]
Length = 562
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 58/151 (38%), Gaps = 3/151 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ V + + + + + S L+ F ++ + + R
Sbjct: 28 LEALIEDHVLEREDHLNAPGFVIRADAVQDVLSTLK--TEAGFDHLSCVTAEEHEDRFES 85
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ + P + V + + + ++ ADW ERE +D+ G+ ++ HP+L
Sbjct: 86 IYHLRKYDDPTQEVSIIVPTS-RDNPVSETAEPVFRTADWHEREAYDLVGVEYDDHPNLE 144
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
RIL ++GHPL D+ + +D+
Sbjct: 145 RILLPDTWQGHPLGLDYNQNKPQIVTFDEHK 175
>gi|108796695|ref|YP_636542.1| NADH dehydrogenase subunit J [Zygnema circumcarinatum]
gi|122211720|sp|Q32RI4|NDHJ_ZYGCR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|61393679|gb|AAX45821.1| 30 kDa subunit of NADH-plastoquinone oxidoreductase [Zygnema
circumcarinatum]
Length = 169
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK---YNRRL 87
+++V D S+ L F + C D V + L
Sbjct: 39 TIEVRPEDWPSVAVALYV---YGFNYLRCQCAYDVAPGGALASVYHLTKVEDVADQPEEL 95
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
VK+ V+ I+ AD+ ERE +DM+GI ++ HP L+RIL + G PLRK
Sbjct: 96 CVKLFVSRNNPSVPSSFWIWKSADFQERECYDMFGIVYKNHPHLKRILMPESWLGWPLRK 155
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 156 DYITPDFYELQ 166
>gi|91773271|ref|YP_565963.1| NADH dehydrogenase subunit C [Methanococcoides burtonii DSM 6242]
gi|91712286|gb|ABE52213.1| F420H2 dehydrogenase subunit C [Methanococcoides burtonii DSM 6242]
Length = 158
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + D +VN F S+ A +S ++ +V +C +++D F ++ VD
Sbjct: 4 KTIIDSLVNKFQDSLVDAKADSDIRVSAYLEPEKIVEVCQYMKD--ELLFDHLSSETAVD 61
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
+ + N VVYH S ++ + +KI + + SIV +Y A+W+ERE ++++G+
Sbjct: 62 YP-KRNEIVVVYHIGSYDHSVLMTIKIKLPRDAPEIESIVPVYWNANWYERETYELFGVK 120
Query: 124 FEGHPDLRRILTDYGFEG-HPLRKDF 148
F HP+L+ ++ G PLRKD+
Sbjct: 121 FNNHPNLKPLVLPDELMGDWPLRKDY 146
>gi|55378231|ref|YP_136081.1| NADH dehydrogenase/oxidoreductase [Haloarcula marismortui ATCC
43049]
gi|55230956|gb|AAV46375.1| NADH dehydrogenase/oxidoreductase [Haloarcula marismortui ATCC
43049]
Length = 560
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + + G V V + ++ + S L+ F + + ++ R
Sbjct: 24 DALADLLGGHVLDREEHVNAEGFVIRPDEVQEVLSTLK--EEAGFDHCACVTAQEYDDRY 81
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
+ + P + V + S +Y ADW ERE +D+ GI ++ HPD
Sbjct: 82 ESIYHLRKYNDPTQELSIVVPSP-KDDPHNESAARVYDTADWHEREAYDLVGIDYDDHPD 140
Query: 130 LRRILTDYGFEGHPLRKDF 148
LRRIL ++GHPL +D+
Sbjct: 141 LRRILLPETWQGHPLSQDY 159
>gi|297520099|ref|ZP_06938485.1| hydrogenase 3, large subunit [Escherichia coli OP50]
Length = 275
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|313679549|ref|YP_004057288.1| NADH dehydrogenase (ubiquinone) 30 kda subunit [Oceanithermus
profundus DSM 14977]
gi|313152264|gb|ADR36115.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Oceanithermus
profundus DSM 14977]
Length = 169
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR 86
E V D +LC L F + + V K +
Sbjct: 11 YDEDVYTVHPEDYRALCERL-AAEGYDFPR-----AISGIDMGYGLRVTLQLTRMKDLAK 64
Query: 87 LRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ V+ V V + ++PG +W+ERE +DM G+ FEGHPDLRRIL + + HPL
Sbjct: 65 VTVRTDVPYDNPVVPSVTDLWPGVEWYEREAYDMLGLRFEGHPDLRRILLEDEWALHPLL 124
Query: 146 KDFPVTGF 153
K + G+
Sbjct: 125 KRYDTGGY 132
>gi|284998292|ref|YP_003420060.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
L.D.8.5]
gi|284446188|gb|ADB87690.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
L.D.8.5]
Length = 164
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDL-VSLCSFLRDDPHCCFVNIID 59
M ++ L + + F + + + +++ V + + + L+ + F ++
Sbjct: 1 MSEALKSLINDLQTKF--KCQAKIENDRRITVIVPDKKIMKDVANHLK---NFGFDHVKA 55
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-----EGKSVPSIVGIYPGADWFER 114
+ G+D+L + +VVYH S ++ +A+ + S+PS+ I+ A ER
Sbjct: 56 VTGIDYLEQEK-LEVVYHISSYSNLDMAKIILALRITVTYKDPSLPSLYSIFESAWTGER 114
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
E ++M GI FEGHPDLRR D FEG +PLRK F +
Sbjct: 115 ETYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSFKIK 152
>gi|307154793|ref|YP_003890177.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Cyanothece sp. PCC
7822]
gi|306985021|gb|ADN16902.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Cyanothece sp. PCC
7822]
Length = 179
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
+ VD L+ + + L F + D + + LR
Sbjct: 50 IKVDAEFLLPIATAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLLKVEDNVDSPEELR 106
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ + + I+ GADW ERE +DMYGI +EGHP+L+RIL + G PLRKD
Sbjct: 107 LKVFLPRDNPRVPSVYWIWKGADWQERESFDMYGIVYEGHPNLKRILMPEDWVGWPLRKD 166
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 167 YISPDFYELQ 176
>gi|29831426|ref|NP_826060.1| NADH dehydrogenase [Streptomyces avermitilis MA-4680]
gi|29608541|dbj|BAC72595.1| putative NADH dehydrogenase (complex I) [Streptomyces avermitilis
MA-4680]
Length = 504
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYN----- 84
L++DV +S RD C + L VD R L +
Sbjct: 28 LTVDVPPTSWISALETARDALGCTY--FDWLSAVDEPGRGFLVSAHVVALPSPPSPSQPP 85
Query: 85 -------------RRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDL 130
RRL V+ V V VG+Y GA W ERE +M+G+ FEGHP L
Sbjct: 86 SPSPSQPPSPSSVRRLLVRTTVPHEAPVLPTAVGVYAGAGWHERETHEMFGVTFEGHPAL 145
Query: 131 RRILTDYGFEGHPLRKDFPVT 151
+L GFEGHPLRKDF +
Sbjct: 146 DPLLLPEGFEGHPLRKDFVLA 166
>gi|15803238|ref|NP_289270.1| large subunit of hydrogenase 3 (part of FHL complex) [Escherichia
coli O157:H7 EDL933]
gi|12517169|gb|AAG57828.1|AE005500_7 large subunit of hydrogenase 3 (part of FHL complex) [Escherichia
coli O157:H7 str. EDL933]
Length = 569
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGXHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|224538210|ref|ZP_03678749.1| hypothetical protein BACCELL_03101 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520178|gb|EEF89283.1| hypothetical protein BACCELL_03101 [Bacteroides cellulosilyticus
DSM 14838]
Length = 530
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ DL + LR + F + L G+D+ VVYH S
Sbjct: 7 IKPTDLHAEMLRLRQEQQMDF--LECLTGMDWGETTDKDTPDTPRGLGVVYHLESTTTGE 64
Query: 86 RL--RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
RL R E +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RLVVRTATLDRENAELPSVSDIWKAADFLEREVYDFYGIIFIGHPDMRRLYLRNDWVGYP 124
Query: 144 LRKDFPVTGFVELHYDDKV 162
+RKD L D++
Sbjct: 125 MRKDNDPEKDNPLRMDNEE 143
>gi|282901529|ref|ZP_06309451.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Cylindrospermopsis
raciborskii CS-505]
gi|281193572|gb|EFA68547.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Cylindrospermopsis
raciborskii CS-505]
Length = 171
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 14 NSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD 73
S S V + V L+ + L F + G+D +
Sbjct: 30 ESLSPDVNGVEI------IKVAPDFLLPTATAL---YAYGFNYLQFQGGIDLGPGQDLVS 80
Query: 74 VVYHFLSPKYNRR---LRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPD 129
V + + +R+K+ + V + I+ ADW ERE +DM+GI ++GHP+
Sbjct: 81 VYHLIKVSSDADKPAEVRLKVFLPRENPVVPSVYWIWRTADWQERESYDMFGIIYDGHPN 140
Query: 130 LRRILTDYGFEGHPLRKDF 148
L+RIL + G PLRKD+
Sbjct: 141 LKRILMPEDWVGWPLRKDY 159
>gi|123967852|ref|YP_001008710.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. AS9601]
gi|218527870|sp|A2BP92|NDHJ_PROMS RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|123197962|gb|ABM69603.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. AS9601]
Length = 176
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR------ 85
+ V L S LR + F + G D N + + +
Sbjct: 44 ISVQPSKLYEAVSALR---NYGFNYLQCQGGYDEGPGKNLVSFYHFITVDDFQKIEKIKE 100
Query: 86 -RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RL+V + S+PS+ I+ G+DW ERE +DMYGI F HP+ +R+L + G PL
Sbjct: 101 VRLKVFLKRDSDLSIPSLYEIFKGSDWQERETFDMYGINFIDHPNPKRLLMPEDWRGWPL 160
Query: 145 RKDFPVTGFVELH 157
RKD+ F EL
Sbjct: 161 RKDYIQPDFYELQ 173
>gi|212550776|ref|YP_002309093.1| NADH dehydrogenase I subunit CD [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549014|dbj|BAG83682.1| NADH dehydrogenase I subunit CD [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 533
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+ + L + L+++ F +ID+ G+D++ + P Y L+
Sbjct: 24 IVSIPKEKLRHVAVLLKNNSRLSFNFLIDIVGIDYIDSLAVIYYLSSTQFPTYIIVLKTY 83
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
E + S+ ++ A +EREV D +GI F + D+RR+ ++G+PLRKD+
Sbjct: 84 TNDREDPQIDSVCDLWQSAGLYEREVHDFFGIRFIKNMDMRRLFLRQDWKGYPLRKDY 141
>gi|330470213|ref|YP_004407956.1| NADH dehydrogenase (ubiquinone) 30 kda subunit [Verrucosispora
maris AB-18-032]
gi|328813184|gb|AEB47356.1| NADH dehydrogenase (ubiquinone) 30 kda subunit [Verrucosispora
maris AB-18-032]
Length = 267
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
++DV + RDD L VD L+ FDVV H S + L ++
Sbjct: 33 TVDVPAFRWRAALLAARDDAELACDFFDWLSAVDELA--EGFDVVVHLWSTTHRHGLLLR 90
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
V +V +YPGA W ERE +M+GI F GH DLR +L FEGHPLRK+F
Sbjct: 91 ARVPRATPTIDSVVSVYPGAAWHERETHEMFGIDFAGHDDLRPLLLPPEFEGHPLRKEFV 150
Query: 150 VT 151
+
Sbjct: 151 LA 152
>gi|57864899|gb|AAW57073.1| NADH dehydrogenase subunit J [cyanobacterium endosymbiont of
Rhopalodia gibba]
Length = 177
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR---LR 88
+ V+ L+ L + L F + D + + + R +R
Sbjct: 48 IKVESKFLIPLATAL---YAYGFNYLQCQGAFDLGAGKELVSFYHLTKVTDNSDRPEEIR 104
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ + + I+ +DW ERE +DMYGI +EGHPDL+RIL + G PLRKD
Sbjct: 105 IKVFLPRDNPRVPSVYWIWKASDWQERESYDMYGIIYEGHPDLKRILMPEDWVGWPLRKD 164
Query: 148 FPVTGFVELH 157
+ F EL
Sbjct: 165 YISPDFYELQ 174
>gi|300711698|ref|YP_003737512.1| NADH dehydrogenase-like complex subunit CD [Halalkalicoccus
jeotgali B3]
gi|299125381|gb|ADJ15720.1| NADH dehydrogenase-like complex subunit CD [Halalkalicoccus
jeotgali B3]
Length = 555
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 3/153 (1%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D I V + + ++ + LRD F ++ + ++ R
Sbjct: 20 DAIERLLGEYVLGRETHLNAEGFVIRPDEVQDVLFALRD--EAGFDHLSVVTAQEYEDRY 77
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
+ + P + V + + +Y ADW ERE +D+ GI +EGHPD
Sbjct: 78 ESIYHLKKYADPTQEVSVVVPT-AKDRPVSQTAEPVYRTADWHEREAYDLVGIEYEGHPD 136
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
RRIL ++GHPL D+ + +
Sbjct: 137 PRRILLPETWQGHPLALDYDQDRPQMVTLAEHQ 169
>gi|159902859|ref|YP_001550203.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9211]
gi|218527868|sp|A9BDT9|NDHJ_PROM4 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|159888035|gb|ABX08249.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. MIT 9211]
Length = 180
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 26 SVGELSLD---VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
E+ ++ VD L + S L+ + F + G D + +
Sbjct: 39 EPDEIGIENLGVDPQQLFKIVSELKMN---GFNYLQCQGGYDEGPGLSLVCFYHLMEMKD 95
Query: 83 YNR-------RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
+N RL+V + VPS+ ++ G DW ERE +DM+GI F+GHP +R+L
Sbjct: 96 FNEGDKPREVRLKVFLDRNGSLRVPSLYKLFRGCDWQERETYDMFGINFDGHPHPKRLLM 155
Query: 136 DYGFEGHPLRKDFPVTGFVELH 157
+ G PLRKD+ F E+
Sbjct: 156 PEDWRGWPLRKDYIQPDFYEMQ 177
>gi|48478474|ref|YP_024180.1| NADH dehydrogenase subunit C [Picrophilus torridus DSM 9790]
gi|48431122|gb|AAT43987.1| NADH-quinone oxidoreductase chain C [Picrophilus torridus DSM 9790]
Length = 151
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
+ + + G + DL+ + D + + GVD + +VVYH
Sbjct: 3 DIIEESQDKFGRKIYKIKKEDLIEFMEQKKRDG----YYLSAITGVD---MKSYIEVVYH 55
Query: 78 FLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+ N L +K+ VPS+ G++ ADW ERE +D+ GI F+GH +LRRIL
Sbjct: 56 IYNYDKNEYLEIKVDTE-DSHVPSLTGLWKAADWDEREQYDLMGIIFDGHENLRRILLPD 114
Query: 138 GFEGHPLRKDFPVTGFVELHYDDK 161
+ GHPLRKD+ + + D +
Sbjct: 115 EWVGHPLRKDYDLKKVQYVSMDRE 138
>gi|148238590|ref|YP_001223977.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 7803]
gi|218527873|sp|A5GIB5|NDHJ_SYNPW RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|147847129|emb|CAK22680.1| NAD(P)H-quinone oxidoreductase subunit J [Synechococcus sp. WH
7803]
Length = 182
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK--------- 82
+ V+ L + + L+ F + G D + +
Sbjct: 48 IAVEALFLPVIAAALKSH---GFDYLQCQGGYDEGPGERLVCFYHLLAMAEVAEGSADQV 104
Query: 83 YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
RL+V ++ SVPS+ G++ GADW ERE +DM+GI FEGHP +R+L + G
Sbjct: 105 REVRLKVFLSREGQPSVPSLYGLFRGADWQERETFDMFGIQFEGHPHPKRLLMPEDWTGW 164
Query: 143 PLRKDFPVTGFVELH 157
PLRKD+ F E+
Sbjct: 165 PLRKDYVQPDFYEMQ 179
>gi|157412654|ref|YP_001483520.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9215]
gi|218527866|sp|A8G2V3|NDHJ_PROM2 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|157387229|gb|ABV49934.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. MIT 9215]
Length = 176
Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR------ 85
+ V+ L S LR + F + G D N + + +
Sbjct: 44 ISVEPNKLYEAVSNLR---NYGFNYLQCQGGYDEGPGKNLVSFYHFITVDDFQKIEKIKE 100
Query: 86 -RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
RL+V + S+PS+ I+ G+DW ERE +DMYGI F HP+ R+L + G PL
Sbjct: 101 VRLKVFLKRDSDLSIPSLYKIFKGSDWQERETYDMYGINFIDHPNPTRLLMPEDWRGWPL 160
Query: 145 RKDFPVTGFVELH 157
RKD+ F EL
Sbjct: 161 RKDYIQPDFYELQ 173
>gi|320186507|gb|EFW61235.1| Formate hydrogenlyase subunit 5 [Shigella flexneri CDC 796-83]
Length = 576
Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKEQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|148241314|ref|YP_001226471.1| NADH dehydrogenase subunit J [Synechococcus sp. RCC307]
gi|218527874|sp|A5GQF9|NDHJ_SYNR3 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|147849624|emb|CAK27118.1| NAD(P)H-quinone oxidoreductase subunit J [Synechococcus sp. RCC307]
Length = 176
Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 27 VGELSLD---VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---- 79
L ++ V+ L + + L+ F + G D +
Sbjct: 37 NDHLGIERLGVEPLALPLVATALKSK---GFDYLQVQGGFDQGPGEPLVSFYHLVQVGGS 93
Query: 80 --SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+ RL V +A +VPS+ ++ GADW ERE +D++GI + GHP +R+L
Sbjct: 94 DGASTAEVRLEVSLARDGDLTVPSLYPLFRGADWQERETFDLFGINYSGHPHPKRLLMPE 153
Query: 138 GFEGHPLRKDFPVTGFVELH 157
+ G+PLRKD+ F EL
Sbjct: 154 DWVGYPLRKDYVQPDFYELQ 173
>gi|283835551|ref|ZP_06355292.1| hydrogenase-4 component G [Citrobacter youngae ATCC 29220]
gi|291068761|gb|EFE06870.1| hydrogenase-4 component G [Citrobacter youngae ATCC 29220]
Length = 569
Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y +S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYY-VMSMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|212693813|ref|ZP_03301941.1| hypothetical protein BACDOR_03334 [Bacteroides dorei DSM 17855]
gi|212663702|gb|EEB24276.1| hypothetical protein BACDOR_03334 [Bacteroides dorei DSM 17855]
Length = 519
Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ L LR H F + L G+D+ + N + +
Sbjct: 5 IEIPAEKLHEEMLKLRQGKHMDF--LRSLTGMDWGEEGLGVVYHLEDTKTRENIVVSTRT 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
E +PS+ I+ GA++ EREV+D YGI F GHPD+RR+ + G+PLRKD+
Sbjct: 63 TNREKPELPSVSDIWKGAEFNEREVYDYYGIRFIGHPDMRRLFLRDDWVGYPLRKDYD 120
>gi|237709341|ref|ZP_04539822.1| NADH dehydrogenase I [Bacteroides sp. 9_1_42FAA]
gi|229456726|gb|EEO62447.1| NADH dehydrogenase I [Bacteroides sp. 9_1_42FAA]
Length = 519
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ L LR H F + L G+D+ + N + +
Sbjct: 5 IEIPAEKLHEEMLKLRQGKHMDF--LRSLTGMDWGEEGLGVVYHLEDTKTRENIVVSTRT 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
E +PS+ I+ GA++ EREV+D YGI F GHPD+RR+ + G+PLRKD+
Sbjct: 63 TNREKPELPSVSDIWKGAEFNEREVYDYYGIRFIGHPDMRRLFLRDDWVGYPLRKDYD 120
>gi|322370547|ref|ZP_08045105.1| NADH dehydrogenase-like complex subunit CD [Haladaptatus
paucihalophilus DX253]
gi|320549964|gb|EFW91620.1| NADH dehydrogenase-like complex subunit CD [Haladaptatus
paucihalophilus DX253]
Length = 552
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 3/148 (2%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
D + + + V ++ + + LRD F ++ L + R
Sbjct: 17 ADELAELLGDLAIGRDDHLNAPGFVVRPDEVQTALTTLRD--EAGFDHLSCLSAQQYEDR 74
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ + P + V + +Y A+W ERE +D+ GI +EGHP
Sbjct: 75 YESIYHLKKYADPTQEVSIVVPTPTDA-PVSQTAEPVYRTAEWHEREAYDLVGIEYEGHP 133
Query: 129 DLRRILTDYGFEGHPLRKDFPVTGFVEL 156
DLRRIL ++GHPL D+ +
Sbjct: 134 DLRRILLPQAWKGHPLSNDYDQNRPQIV 161
>gi|237724575|ref|ZP_04555056.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides sp. D4]
gi|229437134|gb|EEO47211.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides dorei
5_1_36/D4]
Length = 519
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ L LR H F + L G+D+ + N + +
Sbjct: 5 IEIPAEKLHEEMLKLRQGKHMDF--LRSLTGMDWGEEGLGVVYHLEDTKTRENIVVSTRT 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
E +PS+ I+ GA++ EREV+D YGI F GHPD+RR+ + G+PLRKD+
Sbjct: 63 TNREKPELPSVSDIWKGAEFNEREVYDYYGIRFIGHPDMRRLFLRDDWVGYPLRKDYD 120
>gi|298490490|ref|YP_003720667.1| NADH dehydrogenase 30 kDa subunit ['Nostoc azollae' 0708]
gi|298232408|gb|ADI63544.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit ['Nostoc azollae'
0708]
Length = 175
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSP 81
++ G + VD L+ + L F + G+D + V + +
Sbjct: 39 DANGVEIIKVDADFLLPTATAL---YAYGFNYLQFQGGIDLGAGQELVSVYHLLKVSDNA 95
Query: 82 KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+RVK+ + + I+ ADW ERE +DM GI +EGHP+L+RIL +
Sbjct: 96 DKPEEVRVKVFLLRDNPTVPSVYWIWKTADWQERESYDMLGIIYEGHPNLKRILMPEDWV 155
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F EL
Sbjct: 156 GWPLRKDYISPDFYELQ 172
>gi|312183555|gb|ADQ42347.1| NADH:ubiquinone oxidoreductase D [Methanosaeta harundinacea]
Length = 571
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ D+ + ++F G + + +L + +V +C +LRD+ F +
Sbjct: 1 MTTANDVLAALQSAFPGVIEESKVGPERQLWATIKPDRIVDVCKYLRDNH--GFDHYSGA 58
Query: 61 CGVDFLSRS--NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
GVD ++ +++ S + L+VK E SV S+ G+Y A+W+ERE+W+
Sbjct: 59 VGVDRINEGLFEVTEMLASHGSHQVVALLKVKTK-RESPSVKSLTGLYWNANWYEREIWE 117
Query: 119 MYGIFFEGHPDLRRILTDYGFEG-HPLRKDF 148
M GI FEGHP+L +L G P RKDF
Sbjct: 118 MLGINFEGHPELYPLLLADELVGVWPWRKDF 148
>gi|333001064|gb|EGK20634.1| formate hydrogenlyase subunit 5 [Shigella flexneri K-272]
gi|333015431|gb|EGK34770.1| formate hydrogenlyase subunit 5 [Shigella flexneri K-227]
Length = 569
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKAQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|218527837|sp|Q19V88|NDHJ_CHLAT RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|124012182|gb|ABD62198.2| 30 kDa subunit of NADH-plastoquinone oxidoreductase [Chlorokybus
atmophyticus]
Length = 195
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L+V DL S+ L F + + C D N V + + +
Sbjct: 65 ILEVKPEDLTSVAIAL---YAYGFNYLRNQCAYDVSPGGNLASVYHLTKLDADVDQPQEV 121
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V I+ AD+ ERE +DM+GI++EGHP L+RIL + G PLRK
Sbjct: 122 CLKVFLPRENPRVPSVFWIWKTADFQERESYDMFGIYYEGHPHLKRILMPENWVGWPLRK 181
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 182 DYITPDFFELQ 192
>gi|258590790|emb|CBB97127.1| hydrogenase 3 large subunit [Enterobacter radicincitans]
Length = 569
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + F G V ++++ V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHEKFPGVVLDEAWQTKDQITITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + F V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHFAVYYVL-SMEQGVKCWITVRVEVDALKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|56480171|ref|NP_708522.2| large subunit of hydrogenase 3 (part of FHL complex) [Shigella
flexneri 2a str. 301]
gi|56383722|gb|AAN44229.2| large subunit of hydrogenase 3 (part of FHL complex) [Shigella
flexneri 2a str. 301]
gi|332753942|gb|EGJ84317.1| formate hydrogenlyase subunit 5 [Shigella flexneri K-671]
gi|332755607|gb|EGJ85970.1| formate hydrogenlyase subunit 5 [Shigella flexneri 2747-71]
gi|332765667|gb|EGJ95880.1| hydrogenase 4, large subunit [Shigella flexneri 2930-71]
gi|333015899|gb|EGK35235.1| formate hydrogenlyase subunit 5 [Shigella flexneri K-304]
Length = 569
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-----GELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + + + + V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFLGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|110806652|ref|YP_690172.1| large subunit of hydrogenase 3 (part of FHL complex) [Shigella
flexneri 5 str. 8401]
gi|110616200|gb|ABF04867.1| large subunit of hydrogenase 3 (part of FHL complex) [Shigella
flexneri 5 str. 8401]
gi|332753434|gb|EGJ83814.1| formate hydrogenlyase subunit 5 [Shigella flexneri 4343-70]
gi|333000636|gb|EGK20213.1| formate hydrogenlyase subunit 5 [Shigella flexneri K-218]
Length = 569
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-----GELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + + + + V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFLGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|281602086|gb|ADA75070.1| Large subunit of hydrogenase 3 [Shigella flexneri 2002017]
Length = 576
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-----GELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + + + + V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFLGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|119511865|ref|ZP_01630965.1| NADH dehydrogenase subunit J [Nodularia spumigena CCY9414]
gi|119463507|gb|EAW44444.1| NADH dehydrogenase subunit J [Nodularia spumigena CCY9414]
Length = 175
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ V+ L+ + + L F + G+D + V + + +
Sbjct: 45 IIKVEADFLLPISTAL---YAYGFNYLQFQSGIDLGPGEDLVSVYHLIKVGDNAVKPEEI 101
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
RVK+ + + I+ ADW ERE +DM+GI +EGHP+L+RIL + G PLRK
Sbjct: 102 RVKVFLPRENPSVPSVYWIWKTADWQERETYDMFGIVYEGHPNLKRILMPEDWVGWPLRK 161
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 162 DYISPDFYELQ 172
>gi|30064075|ref|NP_838246.1| large subunit of hydrogenase 3 (part of FHL complex) [Shigella
flexneri 2a str. 2457T]
gi|30042331|gb|AAP18056.1| large subunit of hydrogenase 3 (part of FHL complex) [Shigella
flexneri 2a str. 2457T]
gi|313648197|gb|EFS12642.1| formate hydrogenlyase subunit 5 [Shigella flexneri 2a str. 2457T]
Length = 569
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV-----GELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + + + + V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFLGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|330834252|ref|YP_004408980.1| NADH dehydrogenase subunit C [Metallosphaera cuprina Ar-4]
gi|329566391|gb|AEB94496.1| NADH dehydrogenase subunit C [Metallosphaera cuprina Ar-4]
Length = 160
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 1 MVRK-IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M +K IE + + + ++ S++V+ L+ + + L+ F ++
Sbjct: 1 MSQKPIEIVVKVLQDR---KIQVKAEGENRGSIEVEKTRLLEVATVLK---EIGFDHVKS 54
Query: 60 LCGVDFLSRSNRFDVVYHFLSPK---YNRRLRVKIAVAEGKSVPSIVGIYPGADWF-ERE 115
+ G+D+ + F V+YH S L +K V + G+ W ERE
Sbjct: 55 VTGIDYPEQGK-FQVIYHVSSYDLNLGQVILALKTWATYKDPVVPSLLTVWGSVWTGERE 113
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
++M GI FEG+PD+RR FEG +PLRK F +
Sbjct: 114 TYEMLGITFEGNPDMRRFFLPEDFEGVYPLRKSFKIR 150
>gi|317475240|ref|ZP_07934507.1| respiratory-chain NADH dehydrogenase [Bacteroides eggerthii
1_2_48FAA]
gi|316908693|gb|EFV30380.1| respiratory-chain NADH dehydrogenase [Bacteroides eggerthii
1_2_48FAA]
Length = 530
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF---------LSRSNRFDVVYHFLSPKY 83
++ L LR + F + L G+D+ VVY S
Sbjct: 5 YINPAALHDEMLRLRQEEQMDF--LECLTGMDWGEPDTAKDTPDTPRGLGVVYQLESTAT 62
Query: 84 NRRL--RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+R+ R E +PS+ I+ AD+ EREV+D YG+ F GHPD+RR+ + G
Sbjct: 63 GKRVAVRTATLDREHPELPSVCDIWKAADFLEREVFDFYGVVFIGHPDMRRLYLRNDWVG 122
Query: 142 HPLRKDFPVTGFVELHYDDKV 162
+P+RKD L D++
Sbjct: 123 YPMRKDDDPEAQNPLRMDNEE 143
>gi|218129268|ref|ZP_03458072.1| hypothetical protein BACEGG_00845 [Bacteroides eggerthii DSM 20697]
gi|217988646|gb|EEC54966.1| hypothetical protein BACEGG_00845 [Bacteroides eggerthii DSM 20697]
Length = 530
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF---------LSRSNRFDVVYHFLSPKY 83
++ L LR + F + L G+D+ VVY S
Sbjct: 5 YINPAALHDEMLRLRQEEQMDF--LECLTGMDWGEPDTAKDTPDTPRGLGVVYQLESTAT 62
Query: 84 NRR--LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+R +R E +PS+ I+ AD+ EREV+D YG+ F GHPD+RR+ + G
Sbjct: 63 GKRMAVRTATLDREHPELPSVCDIWKAADFLEREVFDFYGVVFIGHPDMRRLYLRNDWVG 122
Query: 142 HPLRKDFPVTGFVELHYDDKV 162
+P+RKD L D++
Sbjct: 123 YPMRKDDDPEAQNPLRMDNEE 143
>gi|265755016|ref|ZP_06089930.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides sp. 3_1_33FAA]
gi|263234627|gb|EEZ20206.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides sp. 3_1_33FAA]
Length = 483
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ L LR H F + L G+D+ + N + +
Sbjct: 5 IEIPAEKLHEEMLKLRQGKHMDF--LRSLTGMDWGEEGLGVVYHLEDTKTRENIVVSTRT 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
E +PS+ I+ GA++ EREV+D YGI F GHPD+RR+ + G+PLRKD+
Sbjct: 63 TNREKPELPSVSDIWKGAEFNEREVYDYYGIRFIGHPDMRRLFLRDDWVGYPLRKDYD 120
>gi|260887649|ref|ZP_05898912.1| NADH dehydrogenase I, C subunit [Selenomonas sputigena ATCC 35185]
gi|330838008|ref|YP_004412588.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Selenomonas
sputigena ATCC 35185]
gi|260862665|gb|EEX77165.1| NADH dehydrogenase I, C subunit [Selenomonas sputigena ATCC 35185]
gi|329745772|gb|AEB99128.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Selenomonas
sputigena ATCC 35185]
Length = 165
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+V F + A E + V D ++ L++ F + +L VD
Sbjct: 12 AKLVEVFPKATFDAEAE--EPAFIVTAADFPAVLRALKEKE--GFDRLGNLTAVD---WK 64
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ ++VYH + + N +L VK A+ + S +YPGA++ EREV+D+ G+ F HP
Sbjct: 65 DHIEMVYHLYNMEENVKLEVKAALDSAAPVIESATSLYPGAEFEEREVYDLMGVEFLSHP 124
Query: 129 DLRRILTDYGFEGHPLRKDF 148
DLRRIL + HPLRKDF
Sbjct: 125 DLRRILMPDNYPAHPLRKDF 144
>gi|284164401|ref|YP_003402680.1| NADH-ubiquinone oxidoreductase chain 49kDa [Haloterrigena
turkmenica DSM 5511]
gi|284014056|gb|ADB60007.1| NADH-ubiquinone oxidoreductase chain 49kDa [Haloterrigena
turkmenica DSM 5511]
Length = 552
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 10/156 (6%)
Query: 1 MVRKIE------DL-GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCC 53
M +E +L D + + + V D+ S+ S L+
Sbjct: 1 MSTGLERDRAPVELSEDDLEAIVGDRALARDDHLNAPGFVVRPDDVQSVLSDLK--ERGG 58
Query: 54 FVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFE 113
F ++ +L + R + + + V + S ++ ADW E
Sbjct: 59 FDHLSNLTAQQYEDRYESIYHLTKYADRTQEVSIVVPTPID-DPVSESAAPVFSTADWHE 117
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
RE +D+ GI +EGHPD RRIL ++GHPL D+
Sbjct: 118 REAFDLVGIDYEGHPDPRRILLPETWQGHPLSLDYD 153
>gi|284034117|ref|YP_003384048.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Kribbella flavida
DSM 17836]
gi|283813410|gb|ADB35249.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Kribbella flavida
DSM 17836]
Length = 262
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 9 GDYIVNSFSGSVRFAV--NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
D+++ + + + A +S G +LDV V LRD+ F + +
Sbjct: 7 ADHLLTALTDAGIAATRTDSFGPPTLDVPVEAWVVAHELLRDEVGMTFFDFLSASDELTD 66
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ + L + +P++ +Y GA+W ERE +M+GI F+G
Sbjct: 67 GFRVVTHLADFWGGAHVEHVLVRTLVPRANPELPTLSEVYAGANWHERETHEMFGIGFDG 126
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVT 151
HP+L +L FEGHPLRK+F +
Sbjct: 127 HPNLLPLLLPDEFEGHPLRKEFVLA 151
>gi|302348181|ref|YP_003815819.1| NADH-quinone oxidoreductase subunit C [Acidilobus saccharovorans
345-15]
gi|302328593|gb|ADL18788.1| NADH-quinone oxidoreductase subunit C [Acidilobus saccharovorans
345-15]
Length = 171
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ E+L I+ + S G + + V LV L+D F ++I +
Sbjct: 1 MVTAEELQKSILEALKDYKPQVEPSKGYIDVVVPVEHLVDAARKLKD---MGFDHVISVG 57
Query: 62 GVDFLSRSNRFDVVYHFLSP--KYNRRLRVKIAV---AEGKSVPSIVGIYPGADWFEREV 116
VD+L+ + ++YH S + R V ++ + PS+ ++ A++ ERE
Sbjct: 58 AVDYLT-KKQLKIMYHLTSYLNEDLSRFMVSLSTYVSRDNPHCPSLTPVWLSAEFHEREE 116
Query: 117 WDMYGIFFEGHPDLR-RILTDYGFEGHPLRKDF 148
++M+GI F+GHPDLR +LT PLRKDF
Sbjct: 117 YEMFGITFDGHPDLRLLLLTPVVAALKPLRKDF 149
>gi|150021105|ref|YP_001306459.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermosipho
melanesiensis BI429]
gi|149793626|gb|ABR31074.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermosipho
melanesiensis BI429]
Length = 176
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D+ I F+ + E+ ++V +VS+ S L+ + + ++ L
Sbjct: 1 MTSFMSDVIKKIEKIFND-IEIVEIDSREIKINVKPESIVSILSMLKGE---GYSHLSLL 56
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVWDM 119
VD++ N+F++VY S K ++ V + G S V ++ERE+ +
Sbjct: 57 TAVDWIE-ENKFELVYILFSWKDGSKIIVSTKIERGNSQFVTVKHLWSIARYYEREIHEF 115
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY--DDKVKKVVYR 168
+GI FEG+ D++ + + + PLRKDF + + + K V++
Sbjct: 116 FGINFEGNDDMKPLFLENWDDIPPLRKDFDPMEYSRKKFPDREYKKDVIHE 166
>gi|254423259|ref|ZP_05036977.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Synechococcus sp. PCC 7335]
gi|196190748|gb|EDX85712.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Synechococcus sp. PCC 7335]
Length = 177
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR----- 85
L VD L+ + L F + C D + V
Sbjct: 47 VLKVDPQFLLPFATAL---YAYGFNYLRCQCAYDSGPGQDLVSVYDLTKLSDDADAPAEV 103
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
R++ + E +PS+ I+ ADW ERE +D++GI +EGHP+L+R+L +EG PLR
Sbjct: 104 RIKCFLP-REDPRIPSVYWIWKSADWQERECYDLFGIIYEGHPNLKRLLMPEDWEGWPLR 162
Query: 146 KDFPVTGFVELH 157
KD+ F EL
Sbjct: 163 KDYISPDFYELQ 174
>gi|163781774|ref|ZP_02176774.1| NADH dehydrogenase I chain D [Hydrogenivirga sp. 128-5-R1-1]
gi|159882994|gb|EDP76498.1| NADH dehydrogenase I chain D [Hydrogenivirga sp. 128-5-R1-1]
Length = 593
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 20/167 (11%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
ED + + F A +S SL + +L+ L L+ F++ + D
Sbjct: 7 EDFAE-LKGRFPE--LEAHDSGKVTSLHIKRENLIELLKELKKRGFKLFIDHSVVDLKDI 63
Query: 66 LSRSNRF-----------------DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPG 108
L + F ++ + + RV + S+PSI ++
Sbjct: 64 LEKEKDFKGAVKENLIAFPEDRLSRFQAFYILYNVDEKKRVIVKTRSDGSLPSIEKLWFA 123
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
W ERE +DM+GI +EGH +L R + PLRKDFP+ GF E
Sbjct: 124 GKWSERECYDMFGIEYEGHENLVRAFMWDTYPYFPLRKDFPLEGFPE 170
>gi|258590788|emb|CBB97125.1| hydrogenase 3 large subunit [Enterobacter radicincitans]
Length = 569
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + F G V +++L V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHEKFPGVVLDEAWQTKDQITLTVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + F V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHFAVYYVL-SMEQGVKCWITVRVEVDALKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|307328660|ref|ZP_07607833.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Streptomyces
violaceusniger Tu 4113]
gi|306885772|gb|EFN16785.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Streptomyces
violaceusniger Tu 4113]
Length = 261
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
A + L++DV ++ RD C + L VD R L
Sbjct: 57 AEEAYDLLTVDVPADSWIASLETARDTLGCSY--FDWLSAVDEPGTGFRVAAYVVALGGS 114
Query: 83 YNRR----------------LRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFE 125
L V+ V + G+Y GA W ERE +M+GI F
Sbjct: 115 GGAGAAGSGGAGAAGRAVRGLLVRTTVPHDAAALPTATGVYAGAAWHERETHEMFGIGFT 174
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVT 151
GHP L +L GFEGHPLRKDF +
Sbjct: 175 GHPGLAPLLLPDGFEGHPLRKDFVLA 200
>gi|254431322|ref|ZP_05045025.1| NAD(P)H-quinone oxidoreductase subunit J [Cyanobium sp. PCC 7001]
gi|197625775|gb|EDY38334.1| NAD(P)H-quinone oxidoreductase subunit J [Cyanobium sp. PCC 7001]
Length = 185
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF------------ 78
+ V+ L L + L+ F + G D +
Sbjct: 42 VIGVEPAFLPVLATALKAH---GFDYLQCQGGYDEGPGGRLVSFYHLVKLAVLAEQSAAT 98
Query: 79 -----LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
RL+V +A ++PS+ G++ GADW ERE +DMYGI F GHP +R+
Sbjct: 99 PKLPSDVRPQEVRLKVFLARDGDLTIPSLYGLFRGADWQERETFDMYGIQFAGHPHPKRL 158
Query: 134 LTDYGFEGHPLRKDFPVTGFVELH 157
L ++G PLRKD+ F E+
Sbjct: 159 LMPEDWKGWPLRKDYVQPDFYEMQ 182
>gi|113953526|ref|YP_729480.1| NADH dehydrogenase subunit J [Synechococcus sp. CC9311]
gi|123132762|sp|Q0IDJ2|NDHJ_SYNS3 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|113880877|gb|ABI45835.1| NADH dehydrogenase I chain J [Synechococcus sp. CC9311]
Length = 183
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK--------- 82
+ V+ L + + L+ + F + G D + +
Sbjct: 49 IGVEALFLQVITAALKSN---GFDYLQCQGGYDEGPGERLVCFYHFVAMAELIDGKRDNL 105
Query: 83 YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
RL+V ++ S+PSI G++ GADW ERE +DM+GI FEGHP +R+L + G
Sbjct: 106 REVRLKVFLSREGEPSLPSIYGLFRGADWQERETFDMFGIHFEGHPHPKRLLMPEDWTGW 165
Query: 143 PLRKDFPVTGFVELH 157
PLRKD+ F E+
Sbjct: 166 PLRKDYVQPDFYEMQ 180
>gi|288557872|emb|CBJ34328.1| hydrogenase 3 large subunit [Enterobacter radicincitans]
Length = 569
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + F G V +++L V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHEKFPGVVLDEAWQTKDQITLTVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + F V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHFAVYYVL-SMEQGVKCWITVRVEVDALKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|227828041|ref|YP_002829821.1| NADH dehydrogenase subunit C [Sulfolobus islandicus M.14.25]
gi|227459837|gb|ACP38523.1| NADH (or F420H2) dehydrogenase, subunit C [Sulfolobus islandicus
M.14.25]
Length = 164
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDL-VSLCSFLRDDPHCCFVNIID 59
M ++ L + + F + + + +++ V + + + L+ + ++
Sbjct: 1 MSEALKSLINDLQTKF--KCQAKIENDRRITVIVPDKKIMKDVANHLK---NFGLDHVKA 55
Query: 60 LCGVDFLSRSNRFDVVYHF-LSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFERE 115
+ G+D+ + V + S ++ + + + + S+PS+ I+ A ERE
Sbjct: 56 VTGIDYPEQEKLEVVYHISSYSNLDLAKIILALRITVTYKDPSLPSLYSIFESAWTGERE 115
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
++M GI FEGHPDLRR D FEG +PLRK F +
Sbjct: 116 TYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSFKIK 152
>gi|237729676|ref|ZP_04560157.1| hydrogenase 3 large subunit [Citrobacter sp. 30_2]
gi|226908282|gb|EEH94200.1| hydrogenase 3 large subunit [Citrobacter sp. 30_2]
Length = 569
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y +S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYY-VMSMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|284928644|ref|YP_003421166.1| NADH dehydrogenase subunit C [cyanobacterium UCYN-A]
gi|284809103|gb|ADB94808.1| NADH dehydrogenase subunit C [cyanobacterium UCYN-A]
Length = 180
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ + L+ L + L F + D + + + +
Sbjct: 50 IIGISPKFLIPLSTAL---YAYGFNYLQCQGAYDLGPGKELVSFYHLVKVADNIDSPQEM 106
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ + VPS+ I+ ADW ERE +DMYGI ++ HPDL+RIL + G PLRK
Sbjct: 107 RLKVFLTRDNPHVPSVYWIWKAADWQERENYDMYGIVYDNHPDLKRILMPEDWVGWPLRK 166
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 167 DYISPNFYELQ 177
>gi|329957596|ref|ZP_08298071.1| respiratory-chain NADH dehydrogenase, subunit [Bacteroides clarus
YIT 12056]
gi|328522473|gb|EGF49582.1| respiratory-chain NADH dehydrogenase, subunit [Bacteroides clarus
YIT 12056]
Length = 533
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF---------LSRSNRFDVVYHFLSPKY 83
++ L LR + F + L G+D+ VVY S
Sbjct: 8 YIEPAALHDEMLRLRQEEQMDF--LECLTGMDWGEPDTAKDTPDTPRGLGVVYQLESTVT 65
Query: 84 NRRL--RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+R+ R E +PS+ I+ AD+ EREV+D YG+ F GHPD+RR+ + G
Sbjct: 66 GKRVAVRTATLDREHPELPSVCDIWKAADFLEREVFDFYGVVFIGHPDMRRLYLRNDWIG 125
Query: 142 HPLRKDFPVTGFVELHYDDKV 162
+P+RKD L D++
Sbjct: 126 YPMRKDDDPEAQNPLRMDNEE 146
>gi|116071574|ref|ZP_01468842.1| NADH dehydrogenase subunit J [Synechococcus sp. BL107]
gi|116065197|gb|EAU70955.1| NADH dehydrogenase subunit J [Synechococcus sp. BL107]
Length = 188
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY-------- 83
+ V+ L + + ++ F + G D + +
Sbjct: 50 IGVESAVLPIIAAAIKSH---GFDYLQCQGGYDEGPGERLVCFYHFIAMAEQVEAMTAGL 106
Query: 84 -----NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
RL+V ++ S+PSI G++ GADW ERE +DMYGI FEGHP +R+L
Sbjct: 107 PHELREVRLKVFLSREGTPSLPSIYGLFRGADWQERETFDMYGIEFEGHPHPKRLLMPED 166
Query: 139 FEGHPLRKDFPVTGFVELH 157
++G PLRKD+ F E+
Sbjct: 167 WKGWPLRKDYVQPDFYEMQ 185
>gi|37521949|ref|NP_925326.1| NADH dehydrogenase subunit J [Gloeobacter violaceus PCC 7421]
gi|35212948|dbj|BAC90321.1| NADH dehydrogenase subunit J [Gloeobacter violaceus PCC 7421]
Length = 179
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 16 FSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVV 75
+ EL + V+ L + L D + + +CG D V
Sbjct: 35 LPHAFLGFALDGVEL-VGVEPEHLPMVGKALHDQ---GYNYLRLMCGYDEGPGERLVSVY 90
Query: 76 ---YHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ + +R+K+ + V S+ I+ ADW ERE +DMYGI +EGHP+L
Sbjct: 91 GLTHCYDDADKPPEVRLKVFLDRADPRVSSVYWIWKAADWQERETYDMYGIVYEGHPNLI 150
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELH 157
RIL G PLRKD+ GF E+
Sbjct: 151 RILNMEDMVGWPLRKDYVTPGFYEVQ 176
>gi|78183816|ref|YP_376250.1| NADH dehydrogenase subunit J [Synechococcus sp. CC9902]
gi|123582226|sp|Q3B0C1|NDHJ_SYNS9 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|78168110|gb|ABB25207.1| NADH dehydrogenase I chain J [Synechococcus sp. CC9902]
Length = 193
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY-------- 83
+ V+ L + + ++ F + G D + +
Sbjct: 55 IGVESAVLPIIVAAIKSH---GFDYLQCQGGYDEGPGERLVCFYHFIAMAEQVEAMTAGR 111
Query: 84 -----NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
RL+V ++ S+PSI G++ GADW ERE +DMYGI FEGHP +R+L
Sbjct: 112 PHELREVRLKVFLSREGTPSLPSIYGLFRGADWQERETFDMYGIEFEGHPHPKRLLMPED 171
Query: 139 FEGHPLRKDFPVTGFVELH 157
++G PLRKD+ F E+
Sbjct: 172 WKGWPLRKDYVQPDFYEMQ 190
>gi|146312835|ref|YP_001177909.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Enterobacter sp.
638]
gi|145319711|gb|ABP61858.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Enterobacter sp.
638]
Length = 569
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 1 MVRKIE--DLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + + +F G V + + ++++ + L + FL +
Sbjct: 1 MSEEKKGQNYLAALHQAFPGVVLEESWQTKDQITVTIKVNYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFER 114
L G D + V Y +S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERQLCGNYAVYY-VMSMEQGVKCWLTVRVEVDPNKPEYPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|33239775|ref|NP_874717.1| NADH dehydrogenase subunit J [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237301|gb|AAP99369.1| NAD(P)H-quinone oxidoreductase subunit J [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 181
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR----- 85
+ V L+ + L+++ F + G D N + Y
Sbjct: 48 IISVKPEFLLDIIVSLKNN---GFNYLECQGGYDEGPGLNIVCFYHLIAIENYKDSDKPR 104
Query: 86 --RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R++V + VPS+ I+ G+DW ERE +DM+G+ F HP +R+L ++G P
Sbjct: 105 EVRVKVFLNRDGDLKVPSLYKIFRGSDWQERETYDMFGVNFVDHPHPKRLLMPEDWKGWP 164
Query: 144 LRKDFPVTGFVELH 157
LRKD+ F E+
Sbjct: 165 LRKDYIQPDFYEMQ 178
>gi|152971580|ref|YP_001336689.1| hydrogenase 3, large subunit (part of FHL complex) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206581032|ref|YP_002236933.1| formate hydrogenlyase, subunit E [Klebsiella pneumoniae 342]
gi|288933889|ref|YP_003437948.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Klebsiella
variicola At-22]
gi|290511030|ref|ZP_06550399.1| hydrogenase 3, large subunit hycE [Klebsiella sp. 1_1_55]
gi|94468066|gb|ABF20065.1| Ech hydrogenase large subunit [Klebsiella pneumoniae]
gi|150956429|gb|ABR78459.1| hydrogenase 3, large subunit (part of FHL complex) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206570090|gb|ACI11866.1| formate hydrogenlyase, subunit E [Klebsiella pneumoniae 342]
gi|288888618|gb|ADC56936.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Klebsiella
variicola At-22]
gi|289776023|gb|EFD84022.1| hydrogenase 3, large subunit hycE [Klebsiella sp. 1_1_55]
Length = 569
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEQGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|238896178|ref|YP_002920914.1| hydrogenase 3 large subunit [Klebsiella pneumoniae NTUH-K2044]
gi|238548496|dbj|BAH64847.1| hydrogenase 3 large subunit [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 569
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEQGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|168262037|ref|ZP_02684010.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168464025|ref|ZP_02697942.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195633193|gb|EDX51607.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|205349181|gb|EDZ35812.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 569
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS---VPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDAHKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|146304644|ref|YP_001191960.1| NADH dehydrogenase subunit C [Metallosphaera sedula DSM 5348]
gi|145702894|gb|ABP96036.1| NADH dehydrogenase subunit C [Metallosphaera sedula DSM 5348]
Length = 160
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K DL ++ ++ ++ G S++VD LV L+ F ++ +
Sbjct: 1 MSEKPIDLVVKLLQERKIPLKVEGDTRG--SIEVDKSKLVETAKVLK---ELGFDHVKAV 55
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRR---LRVKIAVAEGKSVPSIVGIYPGADWF-EREV 116
G+D+ ++ F VVYH S + +K + + V + G+ W ERE
Sbjct: 56 TGIDYPDQAK-FQVVYHVSSFDLQLSKVIIALKTWTSYKEPVVPSLLSVWGSVWTGERET 114
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDF 148
++M GI FEG+PD+RR+ FEG +PLRK F
Sbjct: 115 YEMLGITFEGNPDMRRLFLPEDFEGVYPLRKSF 147
>gi|157736574|ref|YP_001489257.1| NADH-quinone oxidoreductase, C/D subunit [Arcobacter butzleri
RM4018]
gi|218528034|sp|A8ERL4|NUOCD_ARCB4 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|157698428|gb|ABV66588.1| NADH-quinone oxidoreductase, C/D subunit [Arcobacter butzleri
RM4018]
Length = 544
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN----RFDVVYHFLSPKYNRRLRV 89
+D +L S S L+++ + + ++D+ VD+L + RF V+Y + + + +
Sbjct: 8 IDSKELKSTISKLKNEDN--YTILLDVTAVDYLKFPDVTPSRFAVIYILRDSTFTKEITI 65
Query: 90 KIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K V + + S+ +Y ADW ERE +D YGI F GHP+L+R+L + F GHPLRKD+
Sbjct: 66 KSYVDDNTLEIDSLYDLYESADWAERETFDQYGIKFVGHPNLKRVLNHHQFIGHPLRKDY 125
Query: 149 PVT 151
+T
Sbjct: 126 KIT 128
>gi|315635737|ref|ZP_07891000.1| NADH dehydrogenase I [Arcobacter butzleri JV22]
gi|315480034|gb|EFU70704.1| NADH dehydrogenase I [Arcobacter butzleri JV22]
Length = 544
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN----RFDVVYHFLSPKYNRRLRV 89
+D +L S S L+++ + + ++D+ VD+L + RF V+Y + + + +
Sbjct: 8 IDSKELKSTISKLKNEDN--YTILLDVTAVDYLKFPDVTPSRFAVIYILRDSTFTKEITI 65
Query: 90 KIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K V + + S+ +Y ADW ERE +D YGI F GHP+L+R+L + F GHPLRKD+
Sbjct: 66 KSYVDDNTLEIDSLYDLYESADWAERETFDQYGIKFVGHPNLKRVLNHHQFIGHPLRKDY 125
Query: 149 PVT 151
+T
Sbjct: 126 KIT 128
>gi|324497292|gb|ADY39447.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [bacterium
enrichment culture clone P24-9H]
Length = 569
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 1 MVRKIE--DLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + +F G V + + ++++ V L + FL +
Sbjct: 1 MSEEKKGQQYLAALHQAFPGVVLEESWQTKDQITVTVKVNYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFER 114
L G D + V Y +S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERQLCGNYAVYY-VMSMEQGEKCWLTVRVEVDPNKPEYPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|16766155|ref|NP_461770.1| hydrogenase 3 large subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167550311|ref|ZP_02344068.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994153|ref|ZP_02575245.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168230910|ref|ZP_02655968.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168235881|ref|ZP_02660939.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168242579|ref|ZP_02667511.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168820463|ref|ZP_02832463.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194442683|ref|YP_002042091.1| formate hydrogenlyase subunit E [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448570|ref|YP_002046810.1| formate hydrogenlyase subunit E [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194468909|ref|ZP_03074893.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194737308|ref|YP_002115802.1| formate hydrogenlyase subunit E [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250744|ref|YP_002147747.1| formate hydrogenlyase subunit E [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264014|ref|ZP_03164088.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198245407|ref|YP_002216821.1| formate hydrogenlyase subunit E [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389022|ref|ZP_03215634.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204928176|ref|ZP_03219376.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|207858112|ref|YP_002244763.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224584626|ref|YP_002638424.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238909616|ref|ZP_04653453.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16421395|gb|AAL21729.1| hydrogenase 3, large subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194401346|gb|ACF61568.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406874|gb|ACF67093.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194455273|gb|EDX44112.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712810|gb|ACF92031.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197214447|gb|ACH51844.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197242269|gb|EDY24889.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197290814|gb|EDY30168.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197939923|gb|ACH77256.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199606120|gb|EDZ04665.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204322498|gb|EDZ07695.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205324728|gb|EDZ12567.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205327920|gb|EDZ14684.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334554|gb|EDZ21318.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205338022|gb|EDZ24786.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205342945|gb|EDZ29709.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|206709915|emb|CAR34269.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224469153|gb|ACN46983.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261247985|emb|CBG25818.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267994972|gb|ACY89857.1| hydrogenase 3 large subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159409|emb|CBW18927.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312913867|dbj|BAJ37841.1| formate hydrogenlyase subunit E [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087252|emb|CBY97017.1| hydrogenase 4 subunit [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321223402|gb|EFX48468.1| Formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322614332|gb|EFY11263.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621603|gb|EFY18456.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624464|gb|EFY21297.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628795|gb|EFY25578.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633478|gb|EFY30220.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635946|gb|EFY32654.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639654|gb|EFY36339.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646837|gb|EFY43340.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650605|gb|EFY47010.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654783|gb|EFY51102.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659003|gb|EFY55256.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664430|gb|EFY60624.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668321|gb|EFY64478.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322673699|gb|EFY69800.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677760|gb|EFY73823.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681410|gb|EFY77442.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683812|gb|EFY79822.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323131200|gb|ADX18630.1| hydrogenase 3 large subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323193799|gb|EFZ79002.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323200269|gb|EFZ85351.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203228|gb|EFZ88257.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323205525|gb|EFZ90490.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210813|gb|EFZ95686.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216339|gb|EGA01066.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221087|gb|EGA05518.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226908|gb|EGA11090.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230808|gb|EGA14926.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234841|gb|EGA18927.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238880|gb|EGA22930.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241580|gb|EGA25611.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248273|gb|EGA32209.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251143|gb|EGA35016.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256026|gb|EGA39764.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323263161|gb|EGA46699.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264334|gb|EGA47840.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323271161|gb|EGA54589.1| formate hydrogenlyase, subunit E [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326624580|gb|EGE30925.1| hydrogenase 3 large subunit [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|332989721|gb|AEF08704.1| hydrogenase 3 large subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 569
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|261342163|ref|ZP_05970021.1| hydrogenase-4 component G [Enterobacter cancerogenus ATCC 35316]
gi|288315496|gb|EFC54434.1| hydrogenase-4 component G [Enterobacter cancerogenus ATCC 35316]
Length = 569
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 1 MVRKIE--DLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + +F G V + + ++++ V L + FL +
Sbjct: 1 MSEEKKGQQYLAALHQAFPGVVLEESWQTKDQITVTVKVNYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFER 114
L G D + V Y +S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERQLCGNYAVYY-VMSMEQGEKCWLTVRVEVDPNKPEYPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|161615752|ref|YP_001589717.1| hypothetical protein SPAB_03543 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161365116|gb|ABX68884.1| hypothetical protein SPAB_03543 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 569
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQIKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|295097302|emb|CBK86392.1| Ni,Fe-hydrogenase III large subunit [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 569
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 1 MVRKIE--DLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + +F G V + + ++++ + L + FL +
Sbjct: 1 MSEEKKGQQYLAALHQAFPGVVLEESWQTKDQITVTIKVNYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFER 114
L G D + V Y +S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERQLCGNYAVYY-VMSMEQGEKCWLTVRVEVDPAKPEYPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|257077080|ref|ZP_05571441.1| NADH dehydrogenase subunit C [Ferroplasma acidarmanus fer1]
Length = 151
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 18 GSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
+ + G L++D DLV L + + + G+D + +VVYH
Sbjct: 3 KILSEETDKSGMKVLNIDKSDLVELMEDYKGKD----YYLSSITGID---MKDHLEVVYH 55
Query: 78 FLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+ N + VK+ + + VPS+V ++ ADW ERE +D+ G+ FEGH +LRRIL
Sbjct: 56 IHNFDQNDYICVKV-ATDDEKVPSLVKLWKAADWDEREQYDLMGVIFEGHENLRRILLPE 114
Query: 138 GFEGHPLRKDFPV----------TGFVELHYDDKV 162
+ GHPLRKD+ + +G + +D+K
Sbjct: 115 EWVGHPLRKDYDLKKVQYVSMDKSGAEHVSFDEKE 149
>gi|148791382|gb|ABR12482.1| hydrogenase 3 large subunit [Klebsiella oxytoca]
Length = 569
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHQAFPGVVLDEAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEQGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|21672439|ref|NP_660506.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gi|25008853|sp|Q8K9Y5|NUOCD_BUCAP RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|21623051|gb|AAM67717.1| NADH dehydrogenase I chain C, chain D [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 597
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS-------RSNRFDVVYHFLS 80
+ ++ L+ + FL P + + DL GVD F + YH +S
Sbjct: 43 DFPVIWINKSLLLKVGKFLSSSPK-PYNMLFDLHGVDERFRLNRLNLPEADFSIFYHLIS 101
Query: 81 PKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ N + +K+ + + S + ++P A+W+ERE W+M+GI F+ HP+L I+ +
Sbjct: 102 IERNSDILIKVPLLKDDLNVSTFISLFPNANWYERETWEMFGIIFDQHPNLTHIIMPNEW 161
Query: 140 EGHPLRKDFPVTGFV-ELHYDDKVK 163
+G PLRKD+P E + D+ K
Sbjct: 162 KGFPLRKDYPARATEHESFFLDEQK 186
>gi|14548166|sp|Q9MUR1|NDHJ_MESVI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|7259538|gb|AAF43839.1|AF166114_51 subunit J of NADH-plastoquinoneoxidoreductase [Mesostigma viride]
Length = 174
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L+V +L S+ L F + C D + V + + + +
Sbjct: 44 TLEVKAQNLTSVAIAL---YAYGFNYLRSQCAYDVSPGGDLASVYHLTKVDDNADQPQEV 100
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V K + V I+ AD+ ERE +DM+GI++EGHP L+RIL + G PLRK
Sbjct: 101 CIKVFVPRTKPIIPSVFWIWKTADFQERESYDMFGIYYEGHPHLKRILMPEHWIGWPLRK 160
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 161 DYITPDFYELQ 171
>gi|258590786|emb|CBB97123.1| hydrogenase 3 large subunit [Enterobacter radicincitans]
Length = 570
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + F G V ++++ + L + +L
Sbjct: 1 MSE--EKIGQHYLAALHEKFPGVVLDEAWQTKDQITITIKVNYLPEVVEYLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + F V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHFAVYYVL-SMEQGVKCWITVRVEVDALKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|75272588|sp|Q8M9Y0|NDHJ_CHAGL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|22416923|gb|AAM96523.1| subunit J of NADH-plastoquinone oxidoreductase [Chaetosphaeridium
globosum]
Length = 168
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + F + CG D V Y + +
Sbjct: 38 TLQIKPEDWPSIAVALYVN---GFNYLRCQCGYDVYPGGPLASVYYLTKVDDNVDQPEEV 94
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V +PSI ++ AD+ ERE +DM GI +E HP+L+RIL + G PLRK
Sbjct: 95 CIKIFVPRENPKIPSIFWVWKTADYQERETYDMLGIVYESHPNLKRILMPESWLGWPLRK 154
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 155 DYITPDFYELQ 165
>gi|265765491|ref|ZP_06093766.1| NADH dehydrogenase (quinone), D subunit [Bacteroides sp. 2_1_16]
gi|263254875|gb|EEZ26309.1| NADH dehydrogenase (quinone), D subunit [Bacteroides sp. 2_1_16]
Length = 530
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 18/143 (12%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYN 84
++ L LR++ F + L G+D+ + + VVYH S
Sbjct: 6 YIEPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEGDAPNVTRGLGVVYHLESTVTG 63
Query: 85 RRLRVKIAVAE--GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
R+ +K + +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + GH
Sbjct: 64 ERIAIKTSTNNRETPEIPSVSDIWKAADFNEREVFDYYGIVFIGHPDMRRLYLRNDWVGH 123
Query: 143 PLR------KDFPVTGFVELHYD 159
P+R KD P+ E YD
Sbjct: 124 PMRKDNNPEKDNPLRMDNEETYD 146
>gi|53712160|ref|YP_098152.1| NADH dehydrogenase I chain D [Bacteroides fragilis YCH46]
gi|60680344|ref|YP_210488.1| putative NADH-quinone oxidoreductase chain C/D [Bacteroides
fragilis NCTC 9343]
gi|253563802|ref|ZP_04841259.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides sp. 3_2_5]
gi|81316586|sp|Q5LH50|NUOCD_BACFN RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|81383456|sp|Q64Y08|NUOCD_BACFR RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|52215025|dbj|BAD47618.1| NADH dehydrogenase I chain D [Bacteroides fragilis YCH46]
gi|60491778|emb|CAH06536.1| putative NADH-quinone oxidoreductase chain C/D [Bacteroides
fragilis NCTC 9343]
gi|251947578|gb|EES87860.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides sp. 3_2_5]
gi|301161877|emb|CBW21421.1| putative NADH-quinone oxidoreductase chain C/D [Bacteroides
fragilis 638R]
Length = 530
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 18/143 (12%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYN 84
++ L LR++ F + L G+D+ + + VVYH S
Sbjct: 6 YIEPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEGDAPNVTRGLGVVYHLESTVTG 63
Query: 85 RRLRVKIAVAE--GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
R+ +K + +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + GH
Sbjct: 64 ERIAIKTSTNNRETPEIPSVSDIWKAADFNEREVFDYYGIVFIGHPDMRRLYLRNDWVGH 123
Query: 143 PLR------KDFPVTGFVELHYD 159
P+R KD P+ E YD
Sbjct: 124 PMRKDNNPEKDNPLRMDNEETYD 146
>gi|91202884|emb|CAJ72523.1| similar to membrane-bound [NiFe]-hydrogenase-3, large subunit
(chain E) [Candidatus Kuenenia stuttgartiensis]
Length = 531
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 1 MVRKIEDL-GDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M+ L D + F G++ + + + E+ + +L+++C +++D + +
Sbjct: 1 MMSTNRQLHIDKLSGQFKGNITISRSFLENEIYVSTKKENLLNVCLYIKDIFNA---VLS 57
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
+ D + F + Y F + + L V I V+E + PSI P A W+ERE+
Sbjct: 58 SMICNDERTLDKHFKIYYVFSLQREDTFLIVTIPVSEQQPEFPSITPQIPAAHWYEREIK 117
Query: 118 DMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVT 151
DM+G+ GHP ++ F +PLRKDF +
Sbjct: 118 DMFGLIPVGHPRPETLVLHGNFPENTYPLRKDFDIQ 153
>gi|113477001|ref|YP_723062.1| NADH dehydrogenase subunit J [Trichodesmium erythraeum IMS101]
gi|123351997|sp|Q10YT5|NDHJ_TRIEI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|110168049|gb|ABG52589.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Trichodesmium
erythraeum IMS101]
Length = 167
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ + L+ L + L F + C D + + + + +
Sbjct: 37 IIKGNRDFLIPLATAL---YAYGFNYLQCQCAYDAGPGEDLVSMYHLVKVSDDVEQPEEI 93
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ V + I+ AD+ ERE +DMYGI +EGHP+L+RIL + G PLRK
Sbjct: 94 RLKVFVPRDDPRLPSVYWIWKSADFQERESYDMYGIIYEGHPNLKRILMPEDWVGWPLRK 153
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 154 DYISPEFYELQ 164
>gi|300869243|ref|ZP_07113837.1| NAD(P)H-quinone oxidoreductase subunit J [Oscillatoria sp. PCC
6506]
gi|300332788|emb|CBN59035.1| NAD(P)H-quinone oxidoreductase subunit J [Oscillatoria sp. PCC
6506]
Length = 167
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN---RFDVVYHFLSPKYNRRL 87
L VD L+ + + L F + C D + +D+V + +
Sbjct: 37 VLKVDREFLIPMATAL---YAYGFNYLRCQCAYDQGPGEDLVSTYDLVKVSDNCDRPEEV 93
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
RVK+ + + I+ AD+ ERE +DMYGI +EGHP+L+RIL + G PLRK
Sbjct: 94 RVKVFLPRADPRLPSVYWIWKAADFQERESYDMYGIVYEGHPNLKRILMPEDWVGWPLRK 153
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 154 DYISPDFYELQ 164
>gi|307130313|ref|YP_003882329.1| hydrogenase 4, subunit [Dickeya dadantii 3937]
gi|306527842|gb|ADM97772.1| hydrogenase 4, subunit [Dickeya dadantii 3937]
Length = 575
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 11/153 (7%)
Query: 2 VRKI-EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+ D ++ F ++ + +L+L V L + +L +
Sbjct: 10 TENLGADYVAHVRQQFPTAILEEERQTANQLTLTVKLHQLPEVVEYLYYQHG---GWLSV 66
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREV 116
L G D + + F V Y S + + V + PS+ P A W EREV
Sbjct: 67 LFGNDERTLNGHFAVYYVL-SMEQGEKCWVVVKALVNPTVPEFPSVTPRVPAAVWGEREV 125
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
DMYG+ G PD RR++ + +PLRKD
Sbjct: 126 RDMYGLIPVGLPDERRLVLPDDWPDDLYPLRKD 158
>gi|154795215|ref|YP_001019117.2| 30 kDa subunit of NADH-plastoquinone oxidoreductase [Chlorokybus
atmophyticus]
Length = 158
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L+V DL S+ L F + + C D N V + + +
Sbjct: 28 ILEVKPEDLTSVAIAL---YAYGFNYLRNQCAYDVSPGGNLASVYHLTKLDADVDQPQEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V I+ AD+ ERE +DM+GI++EGHP L+RIL + G PLRK
Sbjct: 85 CLKVFLPRENPRVPSVFWIWKTADFQERESYDMFGIYYEGHPHLKRILMPENWVGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 145 DYITPDFFELQ 155
>gi|90025053|ref|NP_683806.2| NADH dehydrogenase subunit J [Chaetosphaeridium globosum]
Length = 158
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + F + CG D V Y + +
Sbjct: 28 TLQIKPEDWPSIAVALYVN---GFNYLRCQCGYDVYPGGPLASVYYLTKVDDNVDQPEEV 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V +PSI ++ AD+ ERE +DM GI +E HP+L+RIL + G PLRK
Sbjct: 85 CIKIFVPRENPKIPSIFWVWKTADYQERETYDMLGIVYESHPNLKRILMPESWLGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 145 DYITPDFYELQ 155
>gi|126165879|ref|NP_038399.2| NADH dehydrogenase subunit J [Mesostigma viride]
Length = 158
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L+V +L S+ L F + C D + V + + + +
Sbjct: 28 TLEVKAQNLTSVAIAL---YAYGFNYLRSQCAYDVSPGGDLASVYHLTKVDDNADQPQEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V K + V I+ AD+ ERE +DM+GI++EGHP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRTKPIIPSVFWIWKTADFQERESYDMFGIYYEGHPHLKRILMPEHWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 145 DYITPDFYELQ 155
>gi|226327882|ref|ZP_03803400.1| hypothetical protein PROPEN_01763 [Proteus penneri ATCC 35198]
gi|225203586|gb|EEG85940.1| hypothetical protein PROPEN_01763 [Proteus penneri ATCC 35198]
Length = 387
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+VP+I ++P ++W+EREVWDM+GI F GHP+LRRI+ +EGHPLRKD+P
Sbjct: 8 ENDLNVPTITSLFPNSNWYEREVWDMFGIVFNGHPNLRRIMMLPDWEGHPLRKDYP 63
>gi|329962485|ref|ZP_08300485.1| respiratory-chain NADH dehydrogenase, subunit [Bacteroides fluxus
YIT 12057]
gi|328530041|gb|EGF56929.1| respiratory-chain NADH dehydrogenase, subunit [Bacteroides fluxus
YIT 12057]
Length = 534
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYN 84
++ L LR + F + L G+D+ VVY S
Sbjct: 10 YIEPSALHDEMLRLRKEKQMDF--LECLSGMDWGVPDEKDAPDTPRGLGVVYLLESTVTG 67
Query: 85 RR--LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
R +R E +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + G+
Sbjct: 68 ERMAIRTATLNRERPELPSVSDIWKAADFNEREVYDFYGIVFIGHPDMRRLYLRNDWVGY 127
Query: 143 PLRKDFPVTGFVELHYDDKV 162
P+RKD L D++
Sbjct: 128 PMRKDNDPEKDNPLRMDNEE 147
>gi|262043975|ref|ZP_06017059.1| hydrogenase-4 component G [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038701|gb|EEW39888.1| hydrogenase-4 component G [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 569
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + + Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYALYYVL-SMEQGTKCWITVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|157148259|ref|YP_001455578.1| hypothetical protein CKO_04076 [Citrobacter koseri ATCC BAA-895]
gi|157085464|gb|ABV15142.1| hypothetical protein CKO_04076 [Citrobacter koseri ATCC BAA-895]
Length = 569
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L+L V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTLTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|160886846|ref|ZP_02067849.1| hypothetical protein BACOVA_04860 [Bacteroides ovatus ATCC 8483]
gi|156107257|gb|EDO09002.1| hypothetical protein BACOVA_04860 [Bacteroides ovatus ATCC 8483]
Length = 530
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR+D F + L G+D+ + VVYH S
Sbjct: 7 IAPAALHDEMLRLRNDKQMDF--LESLTGMDWGVADEKDTPEKLRGLGVVYHLESTITGE 64
Query: 86 RLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K A +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RIALKTATTNRELPEIPSVSDIWKIADFYEREVFDFYGITFVGHPDMRRLYLRNDWIGYP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|87300573|ref|ZP_01083415.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 5701]
gi|87284444|gb|EAQ76396.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 5701]
Length = 177
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL----------- 79
+ V+ L + + L+ F + G D +
Sbjct: 39 IIGVEPMFLPVVAAALK---AWGFDYLQCQGGYDEGPGGRLVSFYHLVKLAAALEQGSSP 95
Query: 80 -SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
P RL+V + + ++P++ G++ GADW ERE +DM+GI + GHP +R+L
Sbjct: 96 AQPPEEVRLKVFLERSGDLTIPTLYGLFRGADWQERETFDMFGITYAGHPHPKRLLMPED 155
Query: 139 FEGHPLRKDFPVTGFVELH 157
++G+PLRKD+ F E+
Sbjct: 156 WKGYPLRKDYVQPDFYEMQ 174
>gi|320173426|gb|EFW48625.1| Formate hydrogenlyase subunit 5 [Shigella dysenteriae CDC 74-1112]
Length = 572
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 16/155 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 8 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 62
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 63 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 121
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
EREV DMYG+ G PD RR++ +PLRKD
Sbjct: 122 EREVRDMYGLIPVGLPDERRLVLPDEL--YPLRKD 154
>gi|332881563|ref|ZP_08449212.1| respiratory-chain NADH dehydrogenase, subunit [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332680561|gb|EGJ53509.1| respiratory-chain NADH dehydrogenase, subunit [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 538
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 23 AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK 82
V GE + V D+ +C L DD + DL D R V Y S +
Sbjct: 14 TVEEAGERVVVVPDRDVAEVCRRLHDDAEEPMDFMRDLVAADG---DGRLSVFYQLESTR 70
Query: 83 YNRR--LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
R LR E +PS+ I+ A+ ERE +D +GI F GHPD+RR+ +
Sbjct: 71 TGGRVTLRTDTDGREDPFLPSVCRIWKTAEIKEREAYDFFGIRFTGHPDMRRLYLREDWA 130
Query: 141 GHPLRKDFPV 150
G+PLRKD+ +
Sbjct: 131 GYPLRKDYDM 140
>gi|74313288|ref|YP_311707.1| large subunit of hydrogenase 3 [Shigella sonnei Ss046]
gi|73856765|gb|AAZ89472.1| large subunit of hydrogenase 3 [Shigella sonnei Ss046]
gi|323167104|gb|EFZ52822.1| formate hydrogenlyase subunit 5 [Shigella sonnei 53G]
Length = 565
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 16/155 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
EREV DMYG+ G PD RR++ +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDEL--YPLRKD 147
>gi|319901164|ref|YP_004160892.1| NADH dehydrogenase subunit D; NADH dehydrogenase subunit C
[Bacteroides helcogenes P 36-108]
gi|319416195|gb|ADV43306.1| NADH dehydrogenase subunit D; NADH dehydrogenase subunit C
[Bacteroides helcogenes P 36-108]
Length = 529
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR------FDVVYHFLSPKYNRR 86
++ L LR + F+ + + VVY S R
Sbjct: 5 YIEPLVLHDEMLRLRKEKQMDFLECLSGVDWGMPDEKDAPDTPRGLGVVYLLESTVTGER 64
Query: 87 --LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+R E +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + GHP+
Sbjct: 65 MAIRTATLSRECPELPSVSDIWKAADFNEREVYDFYGIVFIGHPDMRRLYLRNDWIGHPM 124
Query: 145 RKD 147
RKD
Sbjct: 125 RKD 127
>gi|62181352|ref|YP_217769.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62128985|gb|AAX66688.1| Formate hydrogenlyase subunit 5 precursor [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322715835|gb|EFZ07406.1| formate hydrogenlyase subunit 5 precursor [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
Length = 569
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLISVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|237719851|ref|ZP_04550332.1| NADH dehydrogenase I [Bacteroides sp. 2_2_4]
gi|229451120|gb|EEO56911.1| NADH dehydrogenase I [Bacteroides sp. 2_2_4]
Length = 530
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 7 IAPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEKDAPEKLRGLGVVYHLESTITGE 64
Query: 86 RLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K A +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RIALKTATTNRELPEIPSVSDIWKIADFYEREVFDFYGITFVGHPDMRRLYLRNDWIGYP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|237714285|ref|ZP_04544766.1| NADH dehydrogenase subunit I [Bacteroides sp. D1]
gi|262408338|ref|ZP_06084885.1| NADH dehydrogenase (quinone), D subunit [Bacteroides sp. 2_1_22]
gi|293373613|ref|ZP_06619961.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
ovatus SD CMC 3f]
gi|294646452|ref|ZP_06724093.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
ovatus SD CC 2a]
gi|294809424|ref|ZP_06768129.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
xylanisolvens SD CC 1b]
gi|298480350|ref|ZP_06998548.1| NADH dehydrogenase I, B/C/D subunit [Bacteroides sp. D22]
gi|229445777|gb|EEO51568.1| NADH dehydrogenase subunit I [Bacteroides sp. D1]
gi|262353890|gb|EEZ02983.1| NADH dehydrogenase (quinone), D subunit [Bacteroides sp. 2_1_22]
gi|292631438|gb|EFF50068.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
ovatus SD CMC 3f]
gi|292638223|gb|EFF56600.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
ovatus SD CC 2a]
gi|294443360|gb|EFG12122.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Bacteroides
xylanisolvens SD CC 1b]
gi|295086643|emb|CBK68166.1| NADH dehydrogenase subunit C /NADH dehydrogenase subunit D
[Bacteroides xylanisolvens XB1A]
gi|298273631|gb|EFI15194.1| NADH dehydrogenase I, B/C/D subunit [Bacteroides sp. D22]
Length = 530
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 7 IAPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEKDAPEKLRGLGVVYHLESTITGE 64
Query: 86 RLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K A +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RIALKTATTNRELPEIPSVSDIWKIADFYEREVFDFYGITFVGHPDMRRLYLRNDWIGYP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|255691140|ref|ZP_05414815.1| proton-translocating NADH-quinone oxidoreductase, D subunit
[Bacteroides finegoldii DSM 17565]
gi|260623233|gb|EEX46104.1| proton-translocating NADH-quinone oxidoreductase, D subunit
[Bacteroides finegoldii DSM 17565]
Length = 530
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 7 IAPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEKDAPEKLRGLGVVYHLESTITGE 64
Query: 86 RLRVKIAVAE--GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K A +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + GHP
Sbjct: 65 RIALKTATTNREQPEIPSVSDIWKIADFYEREVFDYYGITFIGHPDMRRLYLRNDWVGHP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|160891171|ref|ZP_02072174.1| hypothetical protein BACUNI_03618 [Bacteroides uniformis ATCC 8492]
gi|156859392|gb|EDO52823.1| hypothetical protein BACUNI_03618 [Bacteroides uniformis ATCC 8492]
Length = 529
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYN 84
++ L LR + F + L G+D+ VVY S
Sbjct: 5 YIEPSVLHDEMLRLRKEKQMDF--LECLSGMDWGIPDEKDAPDTPRGLGVVYLLESTITG 62
Query: 85 RRL--RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
R+ R E +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + G+
Sbjct: 63 ERIAVRTATLNREHPELPSVSDIWKAADFNEREVYDFYGIVFIGHPDMRRLYLRNDWVGY 122
Query: 143 PLRKDFPVTGFVELHYDDKV 162
P+RKD L D++
Sbjct: 123 PMRKDNEPEKDNPLRMDNEE 142
>gi|258590784|emb|CBB97121.1| hydrogenase 3 large subunit [Enterobacter radicincitans]
Length = 570
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + F G V ++++ + L + +L
Sbjct: 1 MSE--EKIGQHYLAALHEKFPGVVLDEAWQTKDQMTITIKVNYLPEVVEYLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + F V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHFAVYYVL-SMEQGVKCWITVRVEVDALKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|255007684|ref|ZP_05279810.1| putative NADH-quinone oxidoreductase chain C/D [Bacteroides
fragilis 3_1_12]
gi|313145379|ref|ZP_07807572.1| NADH dehydrogenase subunit I [Bacteroides fragilis 3_1_12]
gi|313134146|gb|EFR51506.1| NADH dehydrogenase subunit I [Bacteroides fragilis 3_1_12]
Length = 530
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYN 84
++ L LR++ F + L G+D+ + + VVYH S
Sbjct: 6 YIEPAALHDEMLRLRNEKQMDF--LESLTGMDWGVAEEGDAPNVTRGLGVVYHLESTVTG 63
Query: 85 RRLRVKIAVAE--GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
R+ VK + +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + G+
Sbjct: 64 ERIAVKTSTDNRETPEIPSVSDIWKAADFNEREVFDYYGIVFIGHPDMRRLYLRNDWVGY 123
Query: 143 PLR------KDFPVTGFVELHYDDKVK 163
P+R KD P+ E YD +
Sbjct: 124 PMRKDNNPEKDNPLRMDNEETYDTTQE 150
>gi|295401605|ref|ZP_06811573.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976372|gb|EFG51982.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacillus
thermoglucosidasius C56-YS93]
Length = 574
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 14/152 (9%)
Query: 6 EDLGDYIVNSFSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + F ++ + + +++L V L + + + ++ G D
Sbjct: 11 KKYVKALRSKFGTAILDESWQTPDQVTLTVKLNSLPEVVEEVYYRQG---GWLANVIGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-------EGKSVPSIVGIYPGADWFEREVW 117
S + F + Y S + + R + PS+ P A W+EREV
Sbjct: 68 ERSLNGHFALYYVL-SMEQAQDFRQNFWLTVKALIPSHKPEFPSVTPRVPAAVWYEREVR 126
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGH--PLRKD 147
DM+G+ G PD RR++ + H PLRKD
Sbjct: 127 DMFGLEPVGLPDTRRLVLPDDWPDHHYPLRKD 158
>gi|299148404|ref|ZP_07041466.1| NADH dehydrogenase I, B/C/D subunits [Bacteroides sp. 3_1_23]
gi|298513165|gb|EFI37052.1| NADH dehydrogenase I, B/C/D subunits [Bacteroides sp. 3_1_23]
Length = 530
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 7 IAPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEKDAPEKLRGLGVVYHLESTITGE 64
Query: 86 RLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K A +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RIALKTATTNRELPEIPSVSDIWKIADFYEREVFDFYGITFVGHPDMRRLYLRNDWIGYP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|56414801|ref|YP_151876.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197363729|ref|YP_002143366.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56129058|gb|AAV78564.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197095206|emb|CAR60757.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 569
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 59/157 (37%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEAVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|317050796|ref|YP_004111912.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurispirillum
indicum S5]
gi|316945880|gb|ADU65356.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurispirillum
indicum S5]
Length = 203
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+ V+ +V+LC L++ + L + + S+RF V H S R+L V+
Sbjct: 79 IVAVESAQVVALCRRLKEAG------LDYLTCLSGVEYSDRFGTVLHMYSTTDKRQLCVQ 132
Query: 91 IAVAEGKSV---PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
A A+ PS+ I+ A+W ERE +D+ GI +EGHPDLRRIL +G+PLRKD
Sbjct: 133 YATADKSEPVTLPSVSAIWSTAEWHERESFDLLGIRYEGHPDLRRILLPSDTQGYPLRKD 192
Query: 148 F 148
F
Sbjct: 193 F 193
>gi|270294463|ref|ZP_06200665.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317481068|ref|ZP_07940147.1| respiratory-chain NADH dehydrogenase [Bacteroides sp. 4_1_36]
gi|270275930|gb|EFA21790.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316902781|gb|EFV24656.1| respiratory-chain NADH dehydrogenase [Bacteroides sp. 4_1_36]
Length = 529
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYN 84
++ L LR + F + L G+D+ VVY S
Sbjct: 5 YIEPSVLHDEMLRLRKEKQMDF--LECLSGMDWGIPDEKDAPDTPRGLGVVYLLESTVTG 62
Query: 85 RRL--RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
R+ R E +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + G+
Sbjct: 63 ERIAVRTATLNREHPELPSVSDIWKAADFNEREVYDFYGIVFIGHPDMRRLYLRNDWVGY 122
Query: 143 PLRKDFPVTGFVELHYDDKV 162
P+RKD L D++
Sbjct: 123 PMRKDNEPEKDNPLRMDNEE 142
>gi|83591656|ref|YP_425408.1| NADH-ubiquinone oxidoreductase [Rhodospirillum rubrum ATCC 11170]
gi|83574570|gb|ABC21121.1| NADH-ubiquinone oxidoreductase [Rhodospirillum rubrum ATCC 11170]
Length = 561
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 5/151 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRF-AVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + + D I F G V L L + +L +++ +D + +
Sbjct: 1 MTTPQTILDDINARFPGCVTRGLAPQPDRLYLRTTTEHIRTLAAYVFND--LKGRLVTGV 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
C + L + + + VP++ + PGADW ERE +DM
Sbjct: 59 CTDMGPVTGEYDIIYAFSLDAEGILLTLTEPTDPKDPKVPTLTDLIPGADWHERENYDML 118
Query: 121 GIFFEGHPDLRRILTDYGFEG--HPLRKDFP 149
G+ EGHP+ RR+L + P+RKDFP
Sbjct: 119 GVVAEGHPNPRRLLLSEDWPEDLFPMRKDFP 149
>gi|257051790|ref|YP_003129623.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halorhabdus utahensis
DSM 12940]
gi|256690553|gb|ACV10890.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halorhabdus utahensis
DSM 12940]
Length = 559
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + + V V + ++ + S L+ F ++ + ++ R
Sbjct: 23 DELADLLGDHVLDREEHVNAEGFVIRPDEVEDVLSTLK--ERAGFDHLSAVTAQEYDDRY 80
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
+ + P + V + +E S ++ ADW ERE +D+ GI ++ HPD
Sbjct: 81 ESIYHLKKYDDPTQELSVVVPTS-SEEPVSQSGASVFDTADWHEREAYDLVGIEYDEHPD 139
Query: 130 LRRILTDYGFEGHPLRKDFPVTGFVEL 156
LRRIL ++GHPL ++ T +
Sbjct: 140 LRRILLPETWQGHPLSNEYNQTQPQVV 166
>gi|312110879|ref|YP_003989195.1| NADH-ubiquinone oxidoreductase chain 49kDa [Geobacillus sp.
Y4.1MC1]
gi|311215980|gb|ADP74584.1| NADH-ubiquinone oxidoreductase chain 49kDa [Geobacillus sp.
Y4.1MC1]
Length = 574
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 17/161 (10%)
Query: 1 MVRKIE-----DLGDYIVNSFSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCF 54
M K++ + + + F ++ + + +++L V L + +
Sbjct: 1 MENKMKSDQGKKYVEALRSKFGTAILDESWQTPDQVTLTVKLNSLPEVVEEVYYRQG--- 57
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHF------LSPKYNRRLRVKIAVAEGKSVPSIVGIYPG 108
+ ++ G D S + F + Y S + + + PS+ P
Sbjct: 58 GWLANVIGNDERSLNGHFALYYVLSMEQAQDSRQNFWLTVKALIPSHKPEFPSVTPRVPA 117
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH--PLRKD 147
A W+EREV DM+G+ G PD RR++ + H PLRKD
Sbjct: 118 AVWYEREVRDMFGLEPVGLPDTRRLVLPDDWPDHHYPLRKD 158
>gi|124024213|ref|YP_001018520.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9303]
gi|218527867|sp|A2CCP5|NDHJ_PROM3 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|123964499|gb|ABM79255.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. MIT 9303]
Length = 185
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY------- 83
+ V+ L + + L+ D F + G D + +
Sbjct: 42 VIGVESMFLQVIVAALKAD---GFDYLQCQGGYDEGPGQQLVCFYHLVAMAEMVAKMGVG 98
Query: 84 ----------NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
RL+V ++ + S+PSI G++ GADW ERE +DM+GI FEGHP +R+
Sbjct: 99 DSSSEAAKVREVRLKVFLSREDTPSLPSIYGLFRGADWQERETFDMFGINFEGHPHPKRL 158
Query: 134 LTDYGFEGHPLRKDFPVTGFVELH 157
L ++G PLRKD+ F E+
Sbjct: 159 LMPEDWKGWPLRKDYVQPDFYEMQ 182
>gi|55378738|ref|YP_136588.1| NADH dehydrogenase I chain C D [Haloarcula marismortui ATCC 43049]
gi|55231463|gb|AAV46882.1| NADH dehydrogenase I chain C D [Haloarcula marismortui ATCC 43049]
Length = 545
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 3/152 (1%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
++ + V + + ++ ++ S LR + + + ++ R
Sbjct: 14 LIEPIADHVLSTERHENAPAAVIRADEVQTVLSTLRTEAGL--DHCACVTAQEYADRFET 71
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ + P + V E + S V +YP A W ERE +D+ GI +E HPDLR
Sbjct: 72 IYHLRRYADPTQELSVVVPT-ARESPTSESAVPVYPTAAWHEREAYDLVGIEYEDHPDLR 130
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
RIL ++GHPL +D+ + + + +
Sbjct: 131 RILLPETWQGHPLSRDYNQDQPQIVSFREHER 162
>gi|290524863|gb|ADD31272.1| NADH-plastoquinone oxidoreductase subunit J protein [Euonymus
americanus]
Length = 158
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + S +
Sbjct: 28 TLQIKPADWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRVAYSIDQPEEV 84
Query: 88 RVKIAVAEGKSVP-SIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ S+ ++ AD+ ERE +DM+GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRILSVFWVWKSADFQERESYDMFGISYENHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPDFYEIQ 155
>gi|260597690|ref|YP_003210261.1| formate hydrogenlyase subunit 5 [Cronobacter turicensis z3032]
gi|260216867|emb|CBA30403.1| Formate hydrogenlyase subunit 5 [Cronobacter turicensis z3032]
Length = 569
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 12/155 (7%)
Query: 1 MVRKI--EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + +F G V +L++ V L + FL +
Sbjct: 1 MSEEKTGQHYLRALHEAFPGVVLDEAWQTKDQLTVTVKINYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFER 114
L G D + V Y S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERKLCGSYAVYYVL-SMEQGVKCWITVRVEVDANKPEFPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLVPVGLPDERRLVLPDDWPDDLYPLRKD 151
>gi|156934235|ref|YP_001438151.1| hypothetical protein ESA_02065 [Cronobacter sakazakii ATCC BAA-894]
gi|156532489|gb|ABU77315.1| hypothetical protein ESA_02065 [Cronobacter sakazakii ATCC BAA-894]
Length = 569
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 12/155 (7%)
Query: 1 MVRKI--EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + +F G V +L++ V L + FL +
Sbjct: 1 MSEEKTGQHYLRALHEAFPGVVLDEAWQTKDQLTVTVKINYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFER 114
L G D + V Y S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERKLCGSYAVYYVL-SMEQGVKCWITVRVEVDANKPEFPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLIPVGLPDERRLVLPDDWPDDLYPLRKD 151
>gi|257053410|ref|YP_003131243.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halorhabdus utahensis
DSM 12940]
gi|256692173|gb|ACV12510.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halorhabdus utahensis
DSM 12940]
Length = 549
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI 102
LRD F + + G ++ R + + P + V + S
Sbjct: 48 LEALRD--RAGFDHCACVTGQEYDDRFETIYHLRRYDEPTRELSVVVPTSAE-NPVSQSG 104
Query: 103 VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDK 161
+Y ADW ERE++D+ GI +EGHPDLRRIL ++GHPLR+++ T + + +
Sbjct: 105 ASVYETADWHEREIYDLLGIEYEGHPDLRRILLPETWQGHPLREEYDQTQSQVVTHREN 163
>gi|50120180|ref|YP_049347.1| hydrogenase-4 component G [Pectobacterium atrosepticum SCRI1043]
gi|49610706|emb|CAG74151.1| hydrogenase-4 component G [Pectobacterium atrosepticum SCRI1043]
Length = 578
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 10/147 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ I F +V +L++ + L + F+ + L G D
Sbjct: 19 NYLAQIRQKFPAAVLDEEWQTHDQLTITIKTESLPDVVEFIYYPLG---GWLPVLFGNDE 75
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYGI 122
+ + + V Y S + + + + PS+ P A W ERE+ DMYG+
Sbjct: 76 RTLNGNYAVYYAL-SMEQGEKCWIVVKAYVDPLTLEFPSVTPRVPAAVWGEREIRDMYGL 134
Query: 123 FFEGHPDLRRILTDYGFEG--HPLRKD 147
G PD RR++ + +PLRKD
Sbjct: 135 IPVGLPDERRLVLPDDWPDDLYPLRKD 161
>gi|16761626|ref|NP_457243.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143110|ref|NP_806452.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213052197|ref|ZP_03345075.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213426142|ref|ZP_03358892.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|289823875|ref|ZP_06543481.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25285223|pir||AE0846 formate hydrogenlyase chain 5 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503927|emb|CAD05956.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138743|gb|AAO70312.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 569
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 3 RKI-EDLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
K+ + + +F G V A + +L++ V L + FL + L
Sbjct: 4 EKLGQQYLAALHQAFPGVVMDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---GWLSVL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVW 117
G D + V Y S + + + + V PS+ P A W EREV
Sbjct: 61 FGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWGEREVR 119
Query: 118 DMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
DMYG+ G PD RR++ + +PLRKD
Sbjct: 120 DMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|271501145|ref|YP_003334170.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dickeya dadantii
Ech586]
gi|270344700|gb|ACZ77465.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dickeya dadantii
Ech586]
Length = 575
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 11/153 (7%)
Query: 2 VRKI-EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+ + ++ F ++ + +L++ V L + +L +
Sbjct: 10 AENLGANYVAHVRQQFPTAILEEERQTANQLTITVKLHQLPEVVEYLYYQHG---GWLSV 66
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREV 116
L G D + + F + Y S + + V + PS+ P A W EREV
Sbjct: 67 LFGNDERTLNGHFAIYYVL-SMEQGEKCWVVVKALVNPTVPEFPSVTPRVPAAVWGEREV 125
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
DMYG+ G PD RR++ + +PLRKD
Sbjct: 126 RDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|251790298|ref|YP_003005019.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dickeya zeae
Ech1591]
gi|247538919|gb|ACT07540.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dickeya zeae
Ech1591]
Length = 575
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 11/153 (7%)
Query: 2 VRKI-EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+ + ++ F ++ + +L+L V L + +L +
Sbjct: 10 AENLGANYVAHVRQQFPTAILEEERQTANQLTLTVKLHQLPEVVEYLYYQHG---GWLSV 66
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREV 116
L G D + + F V Y S + + V + PS+ P A W EREV
Sbjct: 67 LFGNDERTLNGHFAVYYVL-SMEQGEKCWVVVKALVNPTVPEFPSVTPRVPAAVWGEREV 125
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
DMYG+ G PD RR++ + +PLRKD
Sbjct: 126 RDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 158
>gi|33864157|ref|NP_895717.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9313]
gi|81576855|sp|Q7V4Q6|NDHJ_PROMM RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; AltName:
Full=NAD(P)H dehydrogenase subunit J; AltName:
Full=NADH-plastoquinone oxidoreductase subunit J;
AltName: Full=NDH-1 subunit J; Short=NDH-J
gi|33635741|emb|CAE22066.1| putative respiratory-chain NADH dehydrogenase subunit
[Prochlorococcus marinus str. MIT 9313]
Length = 185
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY------- 83
+ V+ L + + L+ D F + G D + +
Sbjct: 42 VIGVESMFLQVIVAALKAD---GFDYLQCQGGYDEGPGQQLVCFYHLVAMAEMVAKMGVG 98
Query: 84 ----------NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
RL+V ++ + S+PSI G++ GADW ERE +DM+GI FEGHP +R+
Sbjct: 99 DSSSEAAKVREVRLKVFLSREDIPSLPSIYGLFRGADWQERETFDMFGINFEGHPHPKRL 158
Query: 134 LTDYGFEGHPLRKDFPVTGFVELH 157
L ++G PLRKD+ F E+
Sbjct: 159 LMPEDWKGWPLRKDYVQPDFYEMQ 182
>gi|206890051|ref|YP_002248827.1| hydrogenase-4 component G [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741989|gb|ACI21046.1| hydrogenase-4 component G [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 541
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ ++ + IVN + V + L + + + L F ++ +D
Sbjct: 1 MSEIRETIVN-ITDKVETTDEN---LIVYSKPSQIKEVAKLL-VMQGARFAHL---TAID 52
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWFEREVWDMYGIF 123
F+++ N+ ++ Y F + + VKI + S+ SI I P W ERE D++GI
Sbjct: 53 FINQKNQIELNYFFSLIDDSMNVIVKIPLEASELSISSISEIIPAVIWSERECNDLFGIN 112
Query: 124 FEGHPDLRRILTDYGFE--GHPLRKDF 148
FEGHPD RR++ + HPLRK+F
Sbjct: 113 FEGHPDPRRLVLPDNWPQEVHPLRKNF 139
>gi|317054475|ref|YP_004118500.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Pantoea sp. At-9b]
gi|316952470|gb|ADU71944.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Pantoea sp. At-9b]
Length = 569
Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + F +V + + ++++ V L + +L
Sbjct: 1 MSE--EKIGQHYLAALHLKFPHAVLEESWQTKDQITVTVKTDMLPDVVEWLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + + VA PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGSYAVYYVL-SMERDSKCWITVRVAVDAHRPEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 115 EREVRDMYGLQPIGLPDERRLVLPDDWPDDLYPLRKD 151
>gi|317968580|ref|ZP_07969970.1| NADH dehydrogenase subunit J [Synechococcus sp. CB0205]
Length = 178
Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 16/140 (11%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF------------ 78
L ++ L + + L+ F + G D +
Sbjct: 39 VLGIEAPFLPVIAAALKAS---GFDYLQVQGGYDEGPGGRLVSFYHLLKLGALAEQSATS 95
Query: 79 -LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
P RL+V ++ ++PS+ +Y GADW ERE +DM+GI FEGHP +R+L
Sbjct: 96 THHPPEEVRLKVFLSRDGDLTIPSLYPLYRGADWPERETFDMFGIGFEGHPQPKRLLMPE 155
Query: 138 GFEGHPLRKDFPVTGFVELH 157
++G PLRKD+ F E+
Sbjct: 156 DWKGFPLRKDYVQPDFYEMQ 175
>gi|296104397|ref|YP_003614543.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295058856|gb|ADF63594.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 569
Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 12/155 (7%)
Query: 1 MVRKIE--DLGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + +F G V + ++++ + L + FL +
Sbjct: 1 MSEEKKGQQYLAALHQAFPGVVLDEGWQTKDQVTVTIKVNYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFER 114
L G D + V Y +S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERQLCGNYAVYY-VMSMEKGEKCWLTVRVEVDPNKPEYPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|222479141|ref|YP_002565378.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halorubrum
lacusprofundi ATCC 49239]
gi|222452043|gb|ACM56308.1| NADH-ubiquinone oxidoreductase chain 49kDa [Halorubrum
lacusprofundi ATCC 49239]
Length = 554
Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
D + V + + + + S L+ + ++ + ++ +R
Sbjct: 19 DELEALLGDLVVDRDDHLNAPGFVIRPDTVQETLSILK--EQAGYDHLSVVSAQEYENRY 76
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
+ F P + V + S ++ ADW ERE +D+ GI ++ HPD
Sbjct: 77 ESIYHLKKFDDPTQEVSVVVPAD-KDDPVSESAEPVFRTADWHEREAYDLIGIEYDDHPD 135
Query: 130 LRRILTDYGFEGHPLRKDFP 149
LRRIL ++GHPL D+
Sbjct: 136 LRRILLPETWQGHPLSMDYD 155
>gi|270263097|ref|ZP_06191367.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Serratia odorifera
4Rx13]
gi|270042785|gb|EFA15879.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Serratia odorifera
4Rx13]
Length = 567
Score = 87.7 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+D + F +V A +L++ V L + +L + L G D
Sbjct: 8 QDYLTALQRQFPAAVLAAEWQTADQLTVTVKLNALPEVVEWLYYQQG---GWLSVLFGND 64
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ + + Y S + + + + PS+ P A W EREV DMYG
Sbjct: 65 ERTLCGSYALYYVL-SMEQGVKCWITVRAEVDAQTLEFPSVTPRVPAAVWGEREVRDMYG 123
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 124 LRPVGLPDERRLVLPDDWPDDLYPLRKD 151
>gi|289803231|ref|ZP_06533860.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 344
Score = 87.7 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 3 RKI-EDLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
K+ + + +F G V A + +L++ V L + FL + L
Sbjct: 4 EKLGQQYLAALHQAFPGVVMDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---GWLSVL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVW 117
G D + V Y S + + + + V PS+ P A W EREV
Sbjct: 61 FGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWGEREVR 119
Query: 118 DMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
DMYG+ G PD RR++ + +PLRKD
Sbjct: 120 DMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|90578225|ref|ZP_01234036.1| hydrogenase 4 subunit [Vibrio angustum S14]
gi|90441311|gb|EAS66491.1| hydrogenase 4 subunit [Vibrio angustum S14]
Length = 584
Score = 87.7 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ D + + F ++ ++++ V LV + +L D + G D
Sbjct: 20 KQYVDGVNHFFPSAIIDEEWQTDNQVTITVKMTSLVEVMKWLYYDQG---GWLTVTFGND 76
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + F V + S + + V + V + SI P A W EREV DMYG
Sbjct: 77 ERTLNGHFAVYHAL-SMEGEVKSWVTVKVLVDANSQEFISITPTIPAAVWGEREVRDMYG 135
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 136 LRPVGLPDERRLVLPDDWPEDLHPLRKD 163
>gi|226327311|ref|ZP_03802829.1| hypothetical protein PROPEN_01178 [Proteus penneri ATCC 35198]
gi|225204529|gb|EEG86883.1| hypothetical protein PROPEN_01178 [Proteus penneri ATCC 35198]
Length = 577
Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 10/147 (6%)
Query: 7 DLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
D + F +V + +L++ V L + +L + L G D
Sbjct: 18 DYVAKVREKFPSAVLDEERQTADQLTITVKTESLPEVVEYLYYGLG---GWLPVLFGNDE 74
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS---VPSIVGIYPGADWFEREVWDMYGI 122
S + + V Y S + + V + PS+ P A W ERE+ DMYG+
Sbjct: 75 RSLNGDYAVYYAL-SMEEGEKCWVVVKAHVSPITLEFPSVTPRVPAAVWGEREIRDMYGL 133
Query: 123 FFEGHPDLRRILTDYGFE--GHPLRKD 147
G PD RR++ + +PLRKD
Sbjct: 134 IPVGLPDERRLVLPDDWPEEMYPLRKD 160
>gi|311278311|ref|YP_003940542.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Enterobacter
cloacae SCF1]
gi|308747506|gb|ADO47258.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Enterobacter
cloacae SCF1]
Length = 569
Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 12/155 (7%)
Query: 1 MVRKI--EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + + + +F G V +++L V L + FL +
Sbjct: 1 MSEEKTGQHYLAALHQAFPGVVLDEAWQTKDQVTLTVKVNYLPEVVEFLYYQQG---GWL 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFER 114
L G D + + V Y +S + + + + V PS+ P A W ER
Sbjct: 58 SVLFGNDERKLNGHYAVYY-VMSMEQGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGER 116
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EV DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 EVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|296274178|ref|YP_003656809.1| NADH-ubiquinone oxidoreductase subunit 49kDa [Arcobacter
nitrofigilis DSM 7299]
gi|296098352|gb|ADG94302.1| NADH-ubiquinone oxidoreductase chain 49kDa [Arcobacter nitrofigilis
DSM 7299]
Length = 544
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN----RFDVVYHFLSPKYNRRLRV 89
+ ++ S L+D+ + ++D+ +D+L + RF ++Y + +++ +
Sbjct: 8 ISQNEVKSTIKRLKDEE--GYNLLLDITAIDYLKYPDITPSRFGLIYILRDKTFKKQIVI 65
Query: 90 KIAVAEGKSV-PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
K VA+ +I +Y A+W ERE +D YGI F GHP+++R+L + F G+PLRKD+
Sbjct: 66 KTYVADNNLNVDTISDLYEAANWAERETYDQYGINFVGHPNMKRLLNHHQFVGYPLRKDY 125
Query: 149 PVT 151
+T
Sbjct: 126 NIT 128
>gi|139437057|ref|ZP_01771217.1| Hypothetical protein COLAER_00192 [Collinsella aerofaciens ATCC
25986]
gi|133776704|gb|EBA40524.1| Hypothetical protein COLAER_00192 [Collinsella aerofaciens ATCC
25986]
Length = 590
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 10 DYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ + + G++ +L++ V L +L + + I + G D S
Sbjct: 18 EALRAAVPGAIEKVEWQCEDQLTITVKQDKLPEAVHYLYYE---RYGWIPVIIGNDERSL 74
Query: 69 SNRFDVVYHFLSP-KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEG 126
R+ V Y + + V+ V K + P W ERE+ DM+G+ EG
Sbjct: 75 CGRYAVYYVISMEGEDPGWVTVRTEVDPAKMTFPSVTPFVPACVWGERELRDMFGLIPEG 134
Query: 127 HPDLRRILTDYGFEG--HPLRKD 147
PD RR++ + +PLRKD
Sbjct: 135 LPDRRRLVLPDDWPSGLYPLRKD 157
>gi|13518425|ref|NP_084785.1| NADH dehydrogenase subunit J [Lotus japonicus]
gi|23821910|sp|Q9BBT6|NDHJ_LOTJA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|13358966|dbj|BAB33183.1| NADH dehydrogenase subunit [Lotus japonicus]
Length = 158
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVSPGGLLASVYHLTRIECGIYQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKIFVPRNNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYITPNFYEIQ 155
>gi|288928300|ref|ZP_06422147.1| NADH dehydrogenase I, B/C/D subunit [Prevotella sp. oral taxon 317
str. F0108]
gi|288331134|gb|EFC69718.1| NADH dehydrogenase I, B/C/D subunit [Prevotella sp. oral taxon 317
str. F0108]
Length = 522
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
++++ D + + LR++ H F ++ + G DF + ++V
Sbjct: 6 IELNANDFANEMAKLRNEKHFDF--LVTIVGEDFGEEGFGCIYILENTQTYERISVKVVA 63
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
A E +PS+ ++ AD EREV+D +GI F GHPD+RR+ F G+PLRKD+ +
Sbjct: 64 ADRENPYLPSVTSLWKAADLLEREVYDFFGIKFIGHPDMRRLYLRSDFTGYPLRKDYDM 122
>gi|262366273|gb|ACY62830.1| NADH dehydrogenase I chain C/D [Yersinia pestis D182038]
Length = 527
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 71 RFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
F V YH LS + NR + +K+A+ + V + I+P A+W+ERE W+M+GI F+GHP
Sbjct: 23 DFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGITFDGHPH 82
Query: 130 LRRILTDYGFEGHPLRKDFP 149
L RI+ +EGHPLRKD+P
Sbjct: 83 LTRIMMPQSWEGHPLRKDYP 102
>gi|238799241|ref|ZP_04642688.1| Formate hydrogenlyase subunit 5 [Yersinia mollaretii ATCC 43969]
gi|238716906|gb|EEQ08775.1| Formate hydrogenlyase subunit 5 [Yersinia mollaretii ATCC 43969]
Length = 601
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + L + L G D
Sbjct: 31 YVARLREQFPTAILDEEWQTHDQLTITIKLNSLPEVVEHLYYQQG---GWLSVLFGNDER 87
Query: 67 SRSNRFDVVYHF-------------LSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWF 112
+ + F + Y + VK ++ + PS+ P A W
Sbjct: 88 TLNGYFAIYYVLSMEGREQYGAETGKHYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 147
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 148 EREVRDMYGLQPVGLPDERRLVLPDDWPDDLYPLRKD 184
>gi|66876456|gb|AAY58010.1| NdhJ [Dinetus truncatus]
Length = 165
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD-----------FLSRSNRFDVVYHFL 79
+L + D S+ L + + C D L+R +
Sbjct: 28 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVTRIDYG 84
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + A + +PS+ I+ AD+ ERE +DM+GIF+ HP L+RIL +
Sbjct: 85 AYQPEEVCIKVFAARKNPRIPSVFWIWKSADFQERESYDMFGIFYHNHPRLKRILMPESW 144
Query: 140 EGHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 145 IGWPLRKDYVAPHFYEIQ 162
>gi|260171804|ref|ZP_05758216.1| NADH dehydrogenase I, chain D [Bacteroides sp. D2]
gi|315920116|ref|ZP_07916356.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693991|gb|EFS30826.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 530
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 7 IAPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEKDAPEKLRGLGVVYHLESTITGE 64
Query: 86 RLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K A +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RIALKTATTNRELPEIPSVSDIWKIADFYEREVFDYYGITFIGHPDMRRLYLRNDWIGYP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|51245171|ref|YP_065055.1| NADH dehydrogenase, subunit 9 [Desulfotalea psychrophila LSv54]
gi|50876208|emb|CAG36048.1| probable NADH dehydrogenase, subunit 9 [Desulfotalea psychrophila
LSv54]
Length = 157
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 15/159 (9%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGE----------LSLDVDCGDLVSLCSFLRDDP 50
M E + + + F+ E L++ V L+ + L
Sbjct: 1 MSSIKEQTQEKLASLFADHSTATPLPFVEESDYSICGYYLNIVVSPDLLIETVTVL---D 57
Query: 51 HCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGA 109
+ + + GVD+ V +++ R+ ++ + V I +Y GA
Sbjct: 58 ELGY-FLESITGVDWPKEEEIESVYDFNRYDEHSFRIVIRTRTSRDTPVIPSITSVYNGA 116
Query: 110 DWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+W ERE D +GI F GHP L +L + HPL KDF
Sbjct: 117 NWHERETRDFFGIDFTGHPHLIPLLLPEDADFHPLLKDF 155
>gi|253570157|ref|ZP_04847566.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides sp. 1_1_6]
gi|298384972|ref|ZP_06994531.1| NADH dehydrogenase I, B/C/D subunit [Bacteroides sp. 1_1_14]
gi|218534461|sp|Q8A0F6|NUOD_BACTN RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|251840538|gb|EES68620.1| NADH-quinone oxidoreductase subunit C/D [Bacteroides sp. 1_1_6]
gi|298262116|gb|EFI04981.1| NADH dehydrogenase I, B/C/D subunit [Bacteroides sp. 1_1_14]
Length = 530
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 7 IVPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEKDAPEKLRGLGVVYHLESTVTGE 64
Query: 86 RLRVKIAV--AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K AV E +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RIALKTAVTDRERPEIPSVSDIWKIADFYEREVFDYYGIVFVGHPDMRRLYLRNDWVGYP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|333002275|gb|EGK21839.1| hydrogenase-4 component G [Shigella flexneri K-272]
gi|333016096|gb|EGK35428.1| hydrogenase-4 component G [Shigella flexneri K-227]
Length = 432
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|238755288|ref|ZP_04616632.1| Formate hydrogenlyase subunit 5 [Yersinia ruckeri ATCC 29473]
gi|238706522|gb|EEP98895.1| Formate hydrogenlyase subunit 5 [Yersinia ruckeri ATCC 29473]
Length = 574
Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ F +V+ + ++++ + L + +L + L G D
Sbjct: 15 HHYLAALAKQFPSAVQGSEWQTDTQVTVTIKLNALPDVVEWLYYQQG---GWLSVLFGND 71
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ + + Y +S + + + + PS+ P A W EREV DMYG
Sbjct: 72 ERTLCGNYALYY-VMSMEQGVKCWITVRAEVDPVSLEFPSVTPRVPAAVWGEREVRDMYG 130
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 131 LRPVGLPDERRLVLPDDWPDDLYPLRKD 158
>gi|332755129|gb|EGJ85494.1| hydrogenase-4 component G [Shigella flexneri 4343-70]
gi|333001891|gb|EGK21457.1| hydrogenase-4 component G [Shigella flexneri K-218]
Length = 432
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|269104122|ref|ZP_06156818.1| hydrogenase 4 subunit [Photobacterium damselae subsp. damselae CIP
102761]
gi|268160762|gb|EEZ39259.1| hydrogenase 4 subunit [Photobacterium damselae subsp. damselae CIP
102761]
Length = 581
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 75/197 (38%), Gaps = 27/197 (13%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ D + + F ++ ++++ V LV + +L D + G D
Sbjct: 17 KNYVDGVNHFFPSAIIDEEWQTENQVTITVKMTALVDVMKWLYYDQG---GWLTVTFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
S + F V + S + + V + V + SI P A W EREV DMYG
Sbjct: 74 ERSLNGHFAVYHAL-SMEGEVKSWVTVKVLVDPVSQEFISITPTIPAAVWGEREVRDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD--------FPVTGFVELHYD-----DKVKKVV 166
+ G PD RR++ + HPLRKD P T +D D + V
Sbjct: 133 LHPVGLPDERRLVLPDDWPEDLHPLRKDAMDYRQRPQPTTETETYQFDNQLGNDSNRIVP 192
Query: 167 YRPVELMQE----HRDY 179
P+ + + R +
Sbjct: 193 VGPLHITSDEPGHFRLF 209
>gi|330863806|emb|CBX73901.1| hypothetical protein YEW_DJ14170 [Yersinia enterocolitica W22703]
Length = 296
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + +L + L G D
Sbjct: 26 YVARLREQFPTAILDEEWQTPDQLTITIKLNSLPDVVEYLYYQQG---GWLSVLFGNDER 82
Query: 67 SRSNRFDVVYHFLSPKYNRR--------------LRVKIAVAEGKSVPSIVGIYPGADWF 112
S + F + Y + + + E PS+ P A W
Sbjct: 83 SLNGYFAIYYVLSMEGREQYGIDTGKKYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 142
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 143 EREVRDMYGLQPIGLPDERRLVLPDDWPDDLYPLRKD 179
>gi|29349473|ref|NP_812976.1| NADH dehydrogenase I subunit D [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341382|gb|AAO79170.1| NADH dehydrogenase I, chain D [Bacteroides thetaiotaomicron
VPI-5482]
Length = 538
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 15 IVPAALHDEMLRLRNEKQMDF--LESLTGMDWGVADEKDAPEKLRGLGVVYHLESTVTGE 72
Query: 86 RLRVKIAV--AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ +K AV E +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 73 RIALKTAVTDRERPEIPSVSDIWKIADFYEREVFDYYGIVFVGHPDMRRLYLRNDWVGYP 132
Query: 144 LRKD 147
+RKD
Sbjct: 133 MRKD 136
>gi|34558137|ref|NP_907952.1| hydrogenase 4 subunit [Wolinella succinogenes DSM 1740]
gi|34483855|emb|CAE10852.1| HYDROGENASE 4 SUBUNIT [Wolinella succinogenes]
Length = 579
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 35/200 (17%)
Query: 10 DYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
D ++ + S V+ + +++ V+ DL SFL + + D
Sbjct: 4 DSLIEALSQRVKVLEVTRQYEDQVTALVELNDLPEAVSFLYYGKG---GYLSTMVANDER 60
Query: 67 SRSNRFDVVYHFLS------------PKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFE 113
+ + + Y + + +K + + + P W+E
Sbjct: 61 EINKHYALYYALSMEGGKMFEGDELAQEEKCFITIKALIPADNPTYPSVTPLVPACVWYE 120
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRKDFPVTGFVELHYDDKVKKVVYRPVE 171
RE +DM+G+ EG PD RR+ + PLRKD ++ Y +++ P
Sbjct: 121 REAYDMFGLVAEGLPDKRRLALSDDWPNDLFPLRKD-----AMDYRYRPDMREHYMEP-- 173
Query: 172 LMQEHRDYDFLSPWEGVNSL 191
+++FL P EG +
Sbjct: 174 ------EFEFLRP-EGSGII 186
>gi|212223422|ref|YP_002306658.1| Hydrogenase 4, component G or formate hydrogen lyase, subunit 5
[Thermococcus onnurineus NA1]
gi|212008379|gb|ACJ15761.1| Hydrogenase 4, component G or formate hydrogen lyase, subunit 5
[Thermococcus onnurineus NA1]
Length = 583
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 5 IED--LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ED L +++ + + VD L + + + G
Sbjct: 19 LEDGHLKEFVEKFRGAIFECKKLTRNQYLFIVDREALPEMVLHWHNHSELKETHFSMGTG 78
Query: 63 VDFL------SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFERE 115
D + + +V + + N + +K + E PSI P A W ERE
Sbjct: 79 TDERNIAGKFTYAPVINVAVEPGNGERNYWVILKAYLDEDNPEFPSIAAKLPAALWAERE 138
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFP 149
V+D+ G +GHPDLRR++ + +PLRKD
Sbjct: 139 VYDLLGFNPKGHPDLRRLVLPEDWPEGVYPLRKDHD 174
>gi|313650944|gb|EFS15344.1| hydrogenase-4 component G [Shigella flexneri 2a str. 2457T]
gi|332755529|gb|EGJ85893.1| hydrogenase-4 component G [Shigella flexneri K-671]
gi|332756203|gb|EGJ86554.1| hydrogenase-4 component G [Shigella flexneri 2747-71]
gi|332766294|gb|EGJ96504.1| hydrogenase 4, large subunit [Shigella flexneri 2930-71]
gi|333016354|gb|EGK35685.1| hydrogenase-4 component G [Shigella flexneri K-304]
Length = 432
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|24113815|ref|NP_708325.1| large subunit of hydrogenase 3 [Shigella flexneri 2a str. 301]
gi|24052902|gb|AAN44032.1| large subunit of hydrogenase 3 [Shigella flexneri 2a str. 301]
Length = 447
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 26 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 82
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 83 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 141
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 142 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 169
>gi|333001621|gb|EGK21189.1| hydrogenase-4 component G [Shigella flexneri VA-6]
Length = 432
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|296272275|ref|YP_003654906.1| NADH dehydrogenase [Arcobacter nitrofigilis DSM 7299]
gi|296096450|gb|ADG92400.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Arcobacter
nitrofigilis DSM 7299]
Length = 579
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 21/157 (13%)
Query: 9 GDYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
GD ++N + ++++ VD DL L D + + D
Sbjct: 4 GDNLINKVKEKITIHEIYRQPEDQITITVDRNDLPETVRILYYDLG---GWLSSMIPNDE 60
Query: 66 LSRSNRFDVVYHFLS------------PKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWF 112
+ F + Y + VK + + P A W+
Sbjct: 61 REINGNFALYYVLSMEGGKMTPEDELPQDEKCWITVKTFIPANDPTFPSVTLKVPAAVWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
ERE +DM+G+ G PD RR++ + PLRKD
Sbjct: 121 EREAYDMFGLTAIGLPDPRRLVVSDDWPEGLFPLRKD 157
>gi|90410734|ref|ZP_01218749.1| hydrogenase 4 subunit [Photobacterium profundum 3TCK]
gi|90328365|gb|EAS44663.1| hydrogenase 4 subunit [Photobacterium profundum 3TCK]
Length = 584
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ D + + F ++ ++++ V LV + +L D + G D
Sbjct: 20 KQYVDGVNHFFPSAIIDEEWQTENQVTITVKMTALVEVMKWLYYDQG---GWLAVTFGND 76
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
S + F V + S + + V + + + S+ P A W EREV DMYG
Sbjct: 77 ERSLNGHFAVYHSL-SMEGEVKSWVTVKILVDADSQEFISVTPTIPAAVWGEREVRDMYG 135
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 136 LRPVGLPDERRLVLPDDWPEDLHPLRKD 163
>gi|318042789|ref|ZP_07974745.1| NADH dehydrogenase subunit J [Synechococcus sp. CB0101]
Length = 184
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN--RFDVVYHFLSPKYNR--- 85
L V+ L + + L+ F + G D F + S
Sbjct: 41 VLGVEAPFLPVIAAALKAS---GFDYLQCQGGYDEGPGGRLVSFYHLVKLGSLADQCHAS 97
Query: 86 ------------RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
RL+V + S+PS+ G++ GADW ERE +DM+GI FEGHP +R+
Sbjct: 98 QHLAAELKPEEVRLKVFLPRDGALSIPSLYGLFRGADWQERETFDMFGISFEGHPHPKRL 157
Query: 134 LTDYGFEGHPLRKDFPVTGFVELH 157
L ++G PLRKD+ F E+
Sbjct: 158 LMPEDWKGFPLRKDYVQPDFYEMQ 181
>gi|89074818|ref|ZP_01161272.1| hydrogenase-4 component G [Photobacterium sp. SKA34]
gi|89049393|gb|EAR54955.1| hydrogenase-4 component G [Photobacterium sp. SKA34]
Length = 577
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 70/187 (37%), Gaps = 27/187 (14%)
Query: 16 FSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
F ++ ++++ V L+ + +L D + G D S + F V
Sbjct: 23 FPSAIIDEEWQTDNQVTITVKMTSLIEVMKWLYYDQG---GWLTVTFGNDERSLNGHFAV 79
Query: 75 VYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ S + + V + V + SI P A W ERE+ DMYG+ G PD R
Sbjct: 80 YHAL-SMEGEVKSWVTVKVLVDANSQEFISITPTIPAAVWGEREIRDMYGLRPVGLPDER 138
Query: 132 RILTDYGFEG--HPLRKD--------FPVTGFVELHY-----DDKVKKVVYRPVELMQE- 175
R++ + HPLRKD P T + DD + V P+ + +
Sbjct: 139 RLVLPDDWPEDLHPLRKDAMDYRQRPQPTTETETYQFDNQLGDDSNRIVPVGPLHITSDE 198
Query: 176 ---HRDY 179
R +
Sbjct: 199 PGHFRLF 205
>gi|90407579|ref|ZP_01215760.1| hydrogenase-4 component G [Psychromonas sp. CNPT3]
gi|90311282|gb|EAS39386.1| hydrogenase-4 component G [Psychromonas sp. CNPT3]
Length = 577
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 16 FSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
F ++ ++ + V L+ + +L + + G D + S F V
Sbjct: 24 FPNAILEEEWRTHNQILITVKDTALIEVMKWLYFEKD---GWLSVSFGNDERTLSGYFAV 80
Query: 75 VYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+ S + + + + + + K PSI + P A W ERE+ DM+G+ G PD R
Sbjct: 81 YHTL-SMEGDEKCWIMVKIHVDAETKEFPSITPVIPAAVWGEREIRDMFGLRPIGLPDQR 139
Query: 132 RILTDYGFEG--HPLRKD 147
R++ + HPL KD
Sbjct: 140 RLVLPDDWPEDLHPLCKD 157
>gi|219673991|ref|YP_002456476.1| NADH-plastoquinone oxidoreductase subunit J [Trifolium
subterraneum]
gi|193788960|gb|ACF20556.1| NADH-plastoquinone oxidoreductase subunit J [Trifolium
subterraneum]
Length = 158
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + S +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYSLDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRQNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|90025052|ref|NP_848063.3| NADH dehydrogenase subunit J [Adiantum capillus-veneris]
Length = 159
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
L+V + +S L F + C D + V + +
Sbjct: 29 ILEVKSEEWLSTAVAL---YAYGFNYLRSQCAYDATPGGSLVSVYHLTQMQDQSDQPEEI 85
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
VK+ V +PS+ ++ A++ ERE +DM GI ++GHP LRRIL + G PLRK
Sbjct: 86 CVKVFVSRTNPQIPSVYWVWKSAEFQERESYDMLGIIYQGHPYLRRILMPESWIGWPLRK 145
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 146 DYVVPNFYELQ 156
>gi|147919460|ref|YP_686800.1| hydrogenase, large subunit-like protein (HycE-like) [uncultured
methanogenic archaeon RC-I]
gi|110622196|emb|CAJ37474.1| hydrogenase, large subunit-like protein (HycE-like) [uncultured
methanogenic archaeon RC-I]
Length = 524
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 6/160 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K ++ + I +F + A + + + L + SF+ + +
Sbjct: 1 MTAK--NITNEITAAFGEEMASARDVGNNVFVRAGKDALPYVASFVAKRYGASLATLH-V 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
++ V S + ++ + G + S+ + A+WFERE+ DM+
Sbjct: 58 ADTRQMTGGYTMYAVMPVASENLIVSIEAEVPESPG-TFQSLTPMIYSANWFEREIADMF 116
Query: 121 GIFFEGHPDLRRILTDYGFE--GHPLRKDFPVTGFVELHY 158
G+ GHPDLR ++ + HPLRKD P Y
Sbjct: 117 GLTPVGHPDLRPLVLYDTWPEDYHPLRKDAPGRPPKVDTY 156
>gi|90426041|ref|YP_534411.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rhodopseudomonas
palustris BisB18]
gi|90108055|gb|ABD90092.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rhodopseudomonas
palustris BisB18]
Length = 571
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 10 DYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+Y+ +V ++++ V L S L + + G D S
Sbjct: 15 EYLRQKLPHAVLEERWQTDKQVTVTVKLNQLPEAVSTLYYGRE---GWLSVVVGNDERSL 71
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAV---AEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
++ F + Y S + + V + ++ + PS+ PG W ERE+ DMYG+
Sbjct: 72 NDSFGLYYVL-SMEGEEKCHVVVHAAVPSDNEEFPSVTPKVPGCVWGEREIRDMYGLRPV 130
Query: 126 GHPDLRRILTDYGFEG--HPLRKD 147
G PD RR++ + HPLRKD
Sbjct: 131 GLPDERRLVLPDDWPDGLHPLRKD 154
>gi|242238723|ref|YP_002986904.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dickeya dadantii
Ech703]
gi|242130780|gb|ACS85082.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dickeya dadantii
Ech703]
Length = 575
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 10/142 (7%)
Query: 12 IVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ F ++ + +L++ V L + +L + L G D S +
Sbjct: 21 VRAKFPTAILEEERQTSNQLTITVKLHTLPEVVEYLYYQHG---GWLSVLFGNDERSLNG 77
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
F V Y S + + V + PS+ P A W EREV DMYG+ G
Sbjct: 78 HFAVYYVL-SMEQGEKCWVVVKALVNPTVPEFPSVTPRVPAAVWGEREVRDMYGLIPVGL 136
Query: 128 PDLRRILTDYGFEG--HPLRKD 147
PD RR++ + +PLRKD
Sbjct: 137 PDERRLVLPDDWPDELYPLRKD 158
>gi|82777868|ref|YP_404217.1| hydrogenase 4 subunit [Shigella dysenteriae Sd197]
gi|309784777|ref|ZP_07679410.1| hydrogenase-4 component G [Shigella dysenteriae 1617]
gi|81242016|gb|ABB62726.1| hydrogenase 4 subunit [Shigella dysenteriae Sd197]
gi|308927147|gb|EFP72621.1| hydrogenase-4 component G [Shigella dysenteriae 1617]
Length = 571
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEDRQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVNADSREFPSVTPHVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|15803010|ref|NP_289040.1| hydrogenase 4 subunit [Escherichia coli O157:H7 EDL933]
gi|15832603|ref|NP_311376.1| hydrogenase 4 subunit [Escherichia coli O157:H7 str. Sakai]
gi|168748457|ref|ZP_02773479.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4113]
gi|168756256|ref|ZP_02781263.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4401]
gi|168761093|ref|ZP_02786100.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4501]
gi|168768576|ref|ZP_02793583.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4486]
gi|168773602|ref|ZP_02798609.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4196]
gi|168778450|ref|ZP_02803457.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4076]
gi|168787830|ref|ZP_02812837.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC869]
gi|168798855|ref|ZP_02823862.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC508]
gi|195936630|ref|ZP_03082012.1| hydrogenase 4 subunit [Escherichia coli O157:H7 str. EC4024]
gi|208806682|ref|ZP_03249019.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4206]
gi|208814570|ref|ZP_03255899.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4045]
gi|208819807|ref|ZP_03260127.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4042]
gi|209399980|ref|YP_002271956.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4115]
gi|217327594|ref|ZP_03443677.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. TW14588]
gi|254794432|ref|YP_003079269.1| hydrogenase 4 subunit [Escherichia coli O157:H7 str. TW14359]
gi|261223080|ref|ZP_05937361.1| hydrogenase 4, subunit [Escherichia coli O157:H7 str. FRIK2000]
gi|261259368|ref|ZP_05951901.1| hydrogenase 4, subunit [Escherichia coli O157:H7 str. FRIK966]
gi|12516872|gb|AAG57597.1|AE005478_7 hydrogenase 4 subunit [Escherichia coli O157:H7 str. EDL933]
gi|13362819|dbj|BAB36772.1| hydrogenase 4 subunit [Escherichia coli O157:H7 str. Sakai]
gi|187770667|gb|EDU34511.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4196]
gi|188017010|gb|EDU55132.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4113]
gi|189003251|gb|EDU72237.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4076]
gi|189356600|gb|EDU75019.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4401]
gi|189362326|gb|EDU80745.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4486]
gi|189368454|gb|EDU86870.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4501]
gi|189372352|gb|EDU90768.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC869]
gi|189378645|gb|EDU97061.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC508]
gi|208726483|gb|EDZ76084.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4206]
gi|208735847|gb|EDZ84534.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4045]
gi|208739930|gb|EDZ87612.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4042]
gi|209161380|gb|ACI38813.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. EC4115]
gi|209747696|gb|ACI72155.1| hydrogenase 4 subunit [Escherichia coli]
gi|209747698|gb|ACI72156.1| hydrogenase 4 subunit [Escherichia coli]
gi|209747700|gb|ACI72157.1| hydrogenase 4 subunit [Escherichia coli]
gi|217319961|gb|EEC28386.1| hydrogenase-4, G subunit [Escherichia coli O157:H7 str. TW14588]
gi|254593832|gb|ACT73193.1| hydrogenase 4, subunit [Escherichia coli O157:H7 str. TW14359]
gi|320188819|gb|EFW63478.1| Hydrogenase-4 component G [Escherichia coli O157:H7 str. EC1212]
gi|320640991|gb|EFX10475.1| hydrogenase 4, subunit [Escherichia coli O157:H7 str. G5101]
gi|320646273|gb|EFX15200.1| hydrogenase 4, subunit [Escherichia coli O157:H- str. 493-89]
gi|320651779|gb|EFX20159.1| hydrogenase 4, subunit [Escherichia coli O157:H- str. H 2687]
gi|320657164|gb|EFX24973.1| hydrogenase 4, subunit [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662770|gb|EFX30102.1| hydrogenase 4, subunit [Escherichia coli O55:H7 str. USDA 5905]
gi|326340282|gb|EGD64086.1| Hydrogenase-4 component G [Escherichia coli O157:H7 str. 1125]
gi|326344967|gb|EGD68711.1| Hydrogenase-4 component G [Escherichia coli O157:H7 str. 1044]
Length = 571
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|68565804|sp|Q85FL7|NDHJ_ADICA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|48476002|gb|AAP29395.2| NADH dehydrogenase subunit J [Adiantum capillus-veneris]
Length = 170
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
L+V + +S L F + C D + V + +
Sbjct: 40 ILEVKSEEWLSTAVAL---YAYGFNYLRSQCAYDATPGGSLVSVYHLTQMQDQSDQPEEI 96
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
VK+ V +PS+ ++ A++ ERE +DM GI ++GHP LRRIL + G PLRK
Sbjct: 97 CVKVFVSRTNPQIPSVYWVWKSAEFQERESYDMLGIIYQGHPYLRRILMPESWIGWPLRK 156
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 157 DYVVPNFYELQ 167
>gi|153012224|ref|YP_001381739.1| NADH-plastoquinone oxidoreductase subunit J [Medicago truncatula]
gi|124360834|gb|ABN08806.1| Bacterial enterotoxin [Medicago truncatula]
Length = 158
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + S +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYSLDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRQNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|239907415|ref|YP_002954156.1| putative NADH dehydrogenase [Desulfovibrio magneticus RS-1]
gi|239797281|dbj|BAH76270.1| putative NADH dehydrogenase [Desulfovibrio magneticus RS-1]
Length = 192
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
LS+ V+ +V L + D+ D + F++ YH RL V
Sbjct: 36 LSVTVEAAKVVEAMEVL----DAEGYLLEDVMASDL---QDGFEITYHLSLLDGANRLVV 88
Query: 90 KIAVAEGKSVPSIVG-IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ + + +YPGADW ERE +D YGI FEGHP+L +L FEGHPL K
Sbjct: 89 RAMIPHDAPSLPTISAVYPGADWHERECFDFYGIRFEGHPNLHYLLLPEDFEGHPLVK 146
>gi|291283707|ref|YP_003500525.1| Hydrogenase-4, G subunit [Escherichia coli O55:H7 str. CB9615]
gi|290763580|gb|ADD57541.1| Hydrogenase-4, G subunit [Escherichia coli O55:H7 str. CB9615]
Length = 571
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|118474557|ref|YP_891337.1| hydrogenase-4 component G [Campylobacter fetus subsp. fetus 82-40]
gi|118413783|gb|ABK82203.1| hydrogenase-4 component G [Campylobacter fetus subsp. fetus 82-40]
Length = 582
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 23/161 (14%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ D + N F + + ++++ VD DL + L + + D
Sbjct: 4 DKFIDILKNEF-NILETSRQCEDQITILVDRNDLPKVVHKLYYSIG---GWLSSMVANDE 59
Query: 66 LSRSNRFDVVYHFLS----------------PKYNRRLRVKIAVAEGKSVPS-IVGIYPG 108
+ + + + Y + VK + + + + P
Sbjct: 60 RTINQSYALYYVLSMEGSKMSKEDGTIDEIQSSEKCFITVKTLIPQNDPCYPSVTPLVPA 119
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
W+ERE +DM+G+ EG PD RR++ + +PLRKD
Sbjct: 120 CVWYEREAYDMFGLVAEGLPDKRRLVLSDDWPENLYPLRKD 160
>gi|320667574|gb|EFX34489.1| hydrogenase 4, subunit [Escherichia coli O157:H7 str. LSU-61]
Length = 571
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|157370670|ref|YP_001478659.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Serratia
proteamaculans 568]
gi|157322434|gb|ABV41531.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Serratia
proteamaculans 568]
Length = 567
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + F ++ A +L++ V L + +L + L G D
Sbjct: 8 QHYLAALQQQFPAAMLAAEWQTADQLTVTVKLNALPEVVEWLYYQQG---GWLSVLFGND 64
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ + + Y S + + + + PS+ P A W EREV DMYG
Sbjct: 65 ERTLCGNYALYYVL-SMEQGTKCWITVRAEVDAQTLEFPSVTPRVPAAVWGEREVRDMYG 123
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 124 LRPIGLPDERRLVLPDDWPDDLHPLRKD 151
>gi|331653912|ref|ZP_08354913.1| hydrogenase-4 component G [Escherichia coli M718]
gi|331048761|gb|EGI20837.1| hydrogenase-4 component G [Escherichia coli M718]
Length = 586
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 26 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 82
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 83 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 141
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 142 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 169
>gi|300820850|ref|ZP_07101000.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
119-7]
gi|300526603|gb|EFK47672.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
119-7]
Length = 235
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 68/188 (36%), Gaps = 28/188 (14%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD------------------FPVTGFVELHYDDK 161
+ G PD RR++ + HPLRKD F G + D
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRLRPEPTTDSETYAFINEGNSDARVDPS 186
Query: 162 VKKVVYRP 169
+ + P
Sbjct: 187 SARCISPP 194
>gi|332344307|gb|AEE57641.1| hydrogenase-4, subunit G [Escherichia coli UMNK88]
Length = 571
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|325578547|ref|ZP_08148647.1| hydrogenase-4 component G [Haemophilus parainfluenzae ATCC 33392]
gi|325159783|gb|EGC71913.1| hydrogenase-4 component G [Haemophilus parainfluenzae ATCC 33392]
Length = 576
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ + + F ++ S +++L + L + +L + + G D
Sbjct: 17 KNYIEAVNAKFPNTILDEEWSTQNQVTLTIKTNMLPDVVEYLYYQHE---GWLPLVFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
S + V Y S + + + I PS+ A W ERE++DMYG
Sbjct: 74 ERSIHGNYAVYYVL-SMEGEVKTFITIKALVDPVSLEFPSVTPKVKAAVWGERELFDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 133 LKVVGLPDQRRLVLPDDWPDDLYPLRKD 160
>gi|27904648|ref|NP_777774.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. Bp (Baizongia pistaciae)]
gi|38372477|sp|Q89AU4|NUOCD_BUCBP RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|27904045|gb|AAO26879.1| NADH dehydrogenase I chain C/D [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 597
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 54 FVNIIDLCGVDFLSRSN-------RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGI 105
+ + DL G+D R F VVYHF+S N + +KIA+ E K +
Sbjct: 69 YNMLFDLYGIDERMRLYKHNLPLSHFSVVYHFISINRNSDIILKIALLEEKLSLPTLTKL 128
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
YP A+W+ERE+WDM+GI FE HP+L RIL + GHPLRKD P
Sbjct: 129 YPNANWYEREIWDMFGISFENHPNLIRILMPKTWVGHPLRKDHP 172
>gi|293392057|ref|ZP_06636391.1| hydrogenase-4 component G [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952591|gb|EFE02710.1| hydrogenase-4 component G [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 576
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ + + F ++ S +++L + L + +L + + G D
Sbjct: 17 KNYIEAVNAKFPNTILDEEWSTPNQVTLTIKTNMLPDVVEYLYYQHD---GWLPLVFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ + V Y S + + + I PS+ A W ERE++DMYG
Sbjct: 74 ERTIHGNYAVYYVL-SMEGEVKTFITIKALVDPVTLEFPSVTPKVKAAVWGERELFDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 133 LKAVGLPDQRRLVLPDDWPDDLYPLRKD 160
>gi|261868403|ref|YP_003256325.1| hydrogenase-4 subunit G [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413735|gb|ACX83106.1| hydrogenase-4 component G [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 576
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ + + F ++ S +++L + L + +L + + G D
Sbjct: 17 KNYIEAVNAKFPNTILDEEWSTPNQVTLTIKTNMLPDVVEYLYYQHE---GWLPLVFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ + V Y S + + + I PS+ A W ERE++DMYG
Sbjct: 74 ERTIHGNYAVYYVL-SMEGEVKTFITIKALVDPVTLEFPSVTPKVKAAVWGERELFDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 133 LKAVGLPDQRRLVLPDDWPDDLYPLRKD 160
>gi|153807450|ref|ZP_01960118.1| hypothetical protein BACCAC_01730 [Bacteroides caccae ATCC 43185]
gi|149129812|gb|EDM21024.1| hypothetical protein BACCAC_01730 [Bacteroides caccae ATCC 43185]
Length = 530
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ L LR++ F + L G+D+ + VVYH S
Sbjct: 7 IAPVALHDEMLRLRNEKQMDF--LESLTGMDWGAADEKDTPEKLRGLGVVYHLESTVTGE 64
Query: 86 RLRVKIAVAEG--KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
R+ VK A +PS+ I+ AD++EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 RIAVKTATTNRELPEIPSVSDIWKIADFYEREVFDYYGITFIGHPDMRRLYLRNDWIGYP 124
Query: 144 LRKD 147
+RKD
Sbjct: 125 MRKD 128
>gi|251792879|ref|YP_003007605.1| hydrogenase-4 subunit G [Aggregatibacter aphrophilus NJ8700]
gi|247534272|gb|ACS97518.1| hydrogenase-4 component G [Aggregatibacter aphrophilus NJ8700]
Length = 576
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ + I F ++ S ++ L + L + +L + + + G D
Sbjct: 17 KNYIEAINAKFPNTILDEEWSTPNQVMLTIKTNMLPDVVEYLYYQH---YGWLPLVFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
S + V Y S + + V I PS+ A W ERE++DMYG
Sbjct: 74 ERSIHGNYAVYYVL-SMEGEVKTFVTIKALVDPVTLEFPSVTPKVKAAVWGERELFDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 133 LKAVGLPDQRRLVLPDDWPDDLYPLRKD 160
>gi|223931072|ref|YP_002586933.1| NADH-plastoquinone oxidoreductase subunit J [Syntrichia ruralis]
gi|219562286|gb|ACL27617.1| NADH-plastoquinone oxidoreductase subunit J [Syntrichia ruralis]
Length = 169
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 15/169 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGEL--------SLDVDCGDLVSLCSFLRDDPHC 52
M+ ++ I S + L L + + +S+ L
Sbjct: 1 MLDTYKNNTTQIQGRLSAWLAKHKLPHRPLGFDYQGVEILQIRSENWLSIAVALYV---Y 57
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAV-AEGKSVPSIVGIYPG 108
F + C D V + + + +KI V + +PS+ I+
Sbjct: 58 GFNYLRSQCAYDVAPGGMLASVYHFTKIQDNADQPEEICIKIFVSRQNPKIPSVFWIWKS 117
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ V F EL
Sbjct: 118 ADFQERESYDMLGIYYENHPRLKRILMPDTWIGWPLRKDYIVPDFYELQ 166
>gi|331643104|ref|ZP_08344239.1| hydrogenase-4 component G [Escherichia coli H736]
gi|323961281|gb|EGB56893.1| respiratory-chain NADH dehydrogenase [Escherichia coli H489]
gi|323970991|gb|EGB66240.1| respiratory-chain NADH dehydrogenase [Escherichia coli TA007]
gi|331039902|gb|EGI12122.1| hydrogenase-4 component G [Escherichia coli H736]
Length = 570
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 26 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 82
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 83 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 141
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 142 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 169
>gi|214028120|gb|ACJ63328.1| NADH dehydrogenase subunit J [Solmsia calophylla]
Length = 143
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L C + + C D V + +
Sbjct: 13 TLQIKPEDWHSIALILYV---CGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 69
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFAPRTHPRIPSVFWVWKSADFQERESYDMLGISYKNHPRLKRILMPESWIGWPLRK 129
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 130 DYIAPNFYEIQ 140
>gi|157161947|ref|YP_001459265.1| hydrogenase-4, G subunit [Escherichia coli HS]
gi|157067627|gb|ABV06882.1| hydrogenase-4, G subunit [Escherichia coli HS]
Length = 555
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|16130412|ref|NP_416982.1| hydrogenase 4, subunit [Escherichia coli str. K-12 substr. MG1655]
gi|89109293|ref|AP_003073.1| hydrogenase 4, subunit [Escherichia coli str. K-12 substr. W3110]
gi|170019229|ref|YP_001724183.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
ATCC 8739]
gi|170082097|ref|YP_001731417.1| hydrogenase 4, subunit [Escherichia coli str. K-12 substr. DH10B]
gi|194437605|ref|ZP_03069701.1| hydrogenase-4, G subunit [Escherichia coli 101-1]
gi|238901652|ref|YP_002927448.1| hydrogenase 4, subunit [Escherichia coli BW2952]
gi|253772621|ref|YP_003035452.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162461|ref|YP_003045569.1| hydrogenase 4, subunit [Escherichia coli B str. REL606]
gi|300930124|ref|ZP_07145546.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
187-1]
gi|300951813|ref|ZP_07165626.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
116-1]
gi|300958886|ref|ZP_07170992.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
175-1]
gi|301023872|ref|ZP_07187603.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
196-1]
gi|301644477|ref|ZP_07244474.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
146-1]
gi|307139121|ref|ZP_07498477.1| hydrogenase 4, subunit [Escherichia coli H736]
gi|2499315|sp|P77329|HYFG_ECOLI RecName: Full=Hydrogenase-4 component G
gi|1616956|gb|AAB88569.1| HyfG [Escherichia coli]
gi|1788832|gb|AAC75540.1| hydrogenase 4, subunit [Escherichia coli str. K-12 substr. MG1655]
gi|85675422|dbj|BAA16375.2| hydrogenase 4, subunit [Escherichia coli str. K12 substr. W3110]
gi|169754157|gb|ACA76856.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
ATCC 8739]
gi|169889932|gb|ACB03639.1| hydrogenase 4, subunit [Escherichia coli str. K-12 substr. DH10B]
gi|194423411|gb|EDX39402.1| hydrogenase-4, G subunit [Escherichia coli 101-1]
gi|238861467|gb|ACR63465.1| hydrogenase 4, subunit [Escherichia coli BW2952]
gi|242378085|emb|CAQ32858.1| hydrogenase 4, large subunit, subunit of hydrogenase 4 [Escherichia
coli BL21(DE3)]
gi|253323665|gb|ACT28267.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974362|gb|ACT40033.1| hydrogenase 4, subunit [Escherichia coli B str. REL606]
gi|253978529|gb|ACT44199.1| hydrogenase 4, subunit [Escherichia coli BL21(DE3)]
gi|260448434|gb|ACX38856.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
DH1]
gi|299880626|gb|EFI88837.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
196-1]
gi|300314488|gb|EFJ64272.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
175-1]
gi|300448960|gb|EFK12580.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
116-1]
gi|300461968|gb|EFK25461.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
187-1]
gi|301077222|gb|EFK92028.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
146-1]
gi|315137110|dbj|BAJ44269.1| hydrogenase 4, subunit [Escherichia coli DH1]
gi|315615730|gb|EFU96362.1| hydrogenase-4 component G [Escherichia coli 3431]
Length = 555
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|295136908|ref|YP_003587740.1| NADH dehydrogenase subunit J [Lathyrus sativus]
gi|293338630|gb|ADE43602.1| NADH dehydrogenase subunit J [Lathyrus sativus]
Length = 158
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + S +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYSLDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ I ++ AD+ ERE +DM GI+++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTPRQNPRIPSIFWVWKSADFQERESYDMLGIYYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|332702768|ref|ZP_08422856.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332552917|gb|EGJ49961.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 195
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 31 SLDVDCGDLVSLCSF-LRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
S+ + L+ L+D + D+CG+D L F++VYH RL +
Sbjct: 28 SIYLSSEQLLPAMREALKD-----GYFLEDVCGLDTLE---GFEIVYHLDRWDQPGRLTL 79
Query: 90 KIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+IA+ K PS+ ++P ADW ERE +DMYGI F GHPDL+ +L HPL K+
Sbjct: 80 RIAIPHDKPEAPSVASVFPAADWHERETFDMYGIVFTGHPDLKPLLLPEDSNIHPLLKE 138
>gi|189468078|ref|ZP_03016863.1| hypothetical protein BACINT_04472 [Bacteroides intestinalis DSM
17393]
gi|189436342|gb|EDV05327.1| hypothetical protein BACINT_04472 [Bacteroides intestinalis DSM
17393]
Length = 530
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF--------LSRSNRFDVVYHFLSPKYNR 85
+ DL + L + F + L G+D+ VVY S +
Sbjct: 7 IKPTDLHAEMLRLYREEQMDF--LKCLSGMDWGEPADGDAPDAPRGLGVVYLLESTATGK 64
Query: 86 R--LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
+ +R + +PS+ I+ AD+ EREV+D YGI F GHPD+RR+ + G+P
Sbjct: 65 QAAVRTATLDRKNPELPSVSDIWKAADFNEREVYDFYGIVFIGHPDMRRLYLRNDWVGYP 124
Query: 144 LRKDFPVTGFVELHYDDKV 162
+RKD L D++
Sbjct: 125 MRKDNDPEKDNPLRMDNEE 143
>gi|194132109|gb|ACF33363.1| NADH-plastoquinone oxidoreductase subunit J [Gonystylus bancanus]
Length = 158
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L C + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---CGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRTHPRIPSVFWVWKSADFQERESYDMLGISYKNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 145 DYIAPNFYELQ 155
>gi|317493924|ref|ZP_07952341.1| respiratory-chain NADH dehydrogenase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918251|gb|EFV39593.1| respiratory-chain NADH dehydrogenase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 567
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + F ++ + ++ + L + FL + L G D
Sbjct: 8 QHYIQELRQQFPTAILDESWQTDTQATITIKTNMLPEVVEFLYYKQG---GWLSVLFGND 64
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ V Y S + + + + + PS+ P A W EREV DMYG
Sbjct: 65 ERPLCGSYAVYYVL-SMETGTKCWITVKALVDERTLEFPSVTPRVPAAVWGEREVRDMYG 123
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 124 LIPVGLPDERRLVLPDDWPDELYPLRKD 151
>gi|332796877|ref|YP_004458377.1| NADH (or F420H2) dehydrogenase subunit C [Acidianus hospitalis W1]
gi|332694612|gb|AEE94079.1| NADH (or F420H2) dehydrogenase, subunit C [Acidianus hospitalis W1]
Length = 165
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + + + S SL+V ++ + ++ F ++I + G+DF
Sbjct: 10 IDKVLAELKAKGIIAKAESESRGSLEVTKNKIIEIAKIMK---ELGFDHVIAVTGIDFPE 66
Query: 68 RSNRFDVVY-HFLSPKYNRRLRV--KIAVAEGKSVPSIVGIYPGADWF-EREVWDMYGIF 123
+ + + S + +++ K V + G+ W E+E ++M G+
Sbjct: 67 QQKIQVIYHVSSYSVEDLQKIIFAIKTYVDYKDPSLPSLTQIWGSAWTGEKETYEMLGVR 126
Query: 124 FEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
FEGHP+L R+ FEG +PLRKDF +
Sbjct: 127 FEGHPELSRLFLPEDFEGVYPLRKDFKIK 155
>gi|197294101|ref|YP_002149722.1| NADH-plastoquinone oxidoreductase subunit J [Cicer arietinum]
gi|218527823|sp|B5LML3|NDHJ_CICAR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|197089789|gb|ACH41059.1| NADH-plastoquinone oxidoreductase subunit J [Cicer arietinum]
Length = 158
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + S +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYSLDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|260912211|ref|ZP_05918763.1| proton-translocating NADH-quinone oxidoreductase [Prevotella sp.
oral taxon 472 str. F0295]
gi|260633645|gb|EEX51783.1| proton-translocating NADH-quinone oxidoreductase [Prevotella sp.
oral taxon 472 str. F0295]
Length = 522
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
++ + D + + LR++ H F ++ + G DF + ++V
Sbjct: 6 IEFNANDFANEMAKLRNEKHFDF--LVTIVGEDFGEEGFGCIYILENTQTYERISVKVVA 63
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
A E +PS+ ++ AD EREV+D +GI F GHPD+RR+ F G+PLRKD+ +
Sbjct: 64 ADRENPYLPSVTNLWKAADLLEREVYDFFGIKFIGHPDMRRLYLRSDFIGYPLRKDYDM- 122
Query: 152 GFVELHYDDKVKK 164
D + +
Sbjct: 123 -------DPEKNR 128
>gi|331673942|ref|ZP_08374705.1| hydrogenase-4 component G [Escherichia coli TA280]
gi|331069215|gb|EGI40607.1| hydrogenase-4 component G [Escherichia coli TA280]
Length = 586
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + + L G D
Sbjct: 26 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHN---GWLPVLFGND 82
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 83 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 141
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 142 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 169
>gi|261885789|ref|ZP_06009828.1| hydrogenase-4 component G [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 478
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 23/161 (14%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ D + N F + + ++++ VD DL + L + + D
Sbjct: 4 DKFIDILKNEF-NILETSRQCEDQITILVDRNDLPKVVHKLYYSIG---GWLSSMVANDE 59
Query: 66 LSRSNRFDVVYHFLS----------------PKYNRRLRVKIAVAEGKSVPS-IVGIYPG 108
+ + + + Y + VK + + + + P
Sbjct: 60 RTINQSYALYYVLSMEGSKMSKEDGTIDEIQSSEKCFITVKTLIPQNDPCYPSVTPLVPA 119
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
W+ERE +DM+G+ EG PD RR++ + +PLRKD
Sbjct: 120 CVWYEREAYDMFGLVAEGLPDKRRLVLSDDWPENLYPLRKD 160
>gi|197131376|gb|ACH47206.1| NADH-plastoquinone oxidoreductase subunit J [Sarcocaulon
vanderietiae]
Length = 158
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
++ + D S+ L + + C D V + +
Sbjct: 28 TVQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRVECGVDQPEEV 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + +PSI ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFLPRNNPGIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYLAPNFYEIQ 155
>gi|330448645|ref|ZP_08312293.1| hydrogenase 4, large subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492836|dbj|GAA06790.1| hydrogenase 4, large subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 584
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 74/197 (37%), Gaps = 27/197 (13%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ D + + F ++ ++++ V LV + +L D + G D
Sbjct: 20 KQYVDGVNHFFPSAIIDEEWQTDNQVTITVKMTSLVEVMKWLYYDQG---GWLTVTFGND 76
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
S + F V + S + + V + V + SI P A W EREV DMYG
Sbjct: 77 ERSLNGHFAVYHAL-SMEGEVKSWVTVKVLVDANSQEFISITPTIPAAVWGEREVRDMYG 135
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD--------FPVTGFVELHY-----DDKVKKVV 166
+ G PD RR++ + HPLRKD P T + DD + V
Sbjct: 136 LRPVGLPDERRLVLSDDWPEDLHPLRKDAMDYRQRPQPTTETETYQFDNQLGDDSNRIVP 195
Query: 167 YRPVELMQE----HRDY 179
P+ + + R +
Sbjct: 196 VGPLHITSDEPGHFRLF 212
>gi|157157080|ref|YP_001463809.1| hydrogenase-4, G subunit [Escherichia coli E24377A]
gi|193068366|ref|ZP_03049329.1| hydrogenase-4, G subunit [Escherichia coli E110019]
gi|300817748|ref|ZP_07097963.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
107-1]
gi|157079110|gb|ABV18818.1| hydrogenase-4, G subunit [Escherichia coli E24377A]
gi|192958318|gb|EDV88758.1| hydrogenase-4, G subunit [Escherichia coli E110019]
gi|300529736|gb|EFK50798.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
107-1]
Length = 571
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|66876444|gb|AAY58002.1| NdhJ [Falkia repens]
Length = 165
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 14/138 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD-----------FLSRSNRFDVVYHFL 79
+L + D S+ L + + C D L+R +
Sbjct: 28 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVTKIEYG 84
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + A +PS+ I+ AD+ ERE +DM GI+++ HP L+RIL +
Sbjct: 85 AYQPEEVCIKVFASRNNPRIPSVFWIWKSADFQERESYDMLGIYYDNHPRLKRILMPESW 144
Query: 140 EGHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 145 IGWPLRKDYVAPHFYEIQ 162
>gi|297517940|ref|ZP_06936326.1| hydrogenase 4, subunit [Escherichia coli OP50]
Length = 486
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|260856582|ref|YP_003230473.1| hydrogenase 4, subunit HyfG [Escherichia coli O26:H11 str. 11368]
gi|257755231|dbj|BAI26733.1| hydrogenase 4, subunit HyfG [Escherichia coli O26:H11 str. 11368]
Length = 555
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDHRRLVLPDDWPEDMHPLRKD 154
>gi|261885719|ref|ZP_06009758.1| NADH-quinone oxidoreductase chain c/d [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 473
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+ S+ IY A+W ERE +D +G+ FE HP+L+RIL F+G+PLRKD+P+T + L+
Sbjct: 1 MKSVESIYKSANWGERECFDQFGVKFENHPNLKRILNHKDFQGYPLRKDYPITKYQVLYE 60
Query: 159 DDK 161
D
Sbjct: 61 SDD 63
>gi|324118169|gb|EGC12066.1| respiratory-chain NADH dehydrogenase [Escherichia coli E1167]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVMALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|194432176|ref|ZP_03064465.1| hydrogenase-4, G subunit [Shigella dysenteriae 1012]
gi|194419705|gb|EDX35785.1| hydrogenase-4, G subunit [Shigella dysenteriae 1012]
gi|332089806|gb|EGI94907.1| hydrogenase-4 component G [Shigella dysenteriae 155-74]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 EQTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWSEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|323941254|gb|EGB37439.1| respiratory-chain NADH dehydrogenase [Escherichia coli E482]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|293405923|ref|ZP_06649915.1| hydrogenase-4 component G [Escherichia coli FVEC1412]
gi|298381671|ref|ZP_06991270.1| hydrogenase-4 component G [Escherichia coli FVEC1302]
gi|291428131|gb|EFF01158.1| hydrogenase-4 component G [Escherichia coli FVEC1412]
gi|298279113|gb|EFI20627.1| hydrogenase-4 component G [Escherichia coli FVEC1302]
Length = 586
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 26 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 82
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 83 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 141
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 142 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 169
>gi|11497531|ref|NP_054939.1| NADH dehydrogenase subunit J [Spinacia oleracea]
gi|18203266|sp|Q9M3M1|NDHJ_SPIOL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|7636112|emb|CAB88732.1| NADH dehydrogenase 19kDa subunit [Spinacia oleracea]
Length = 158
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM+GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSADFQERESYDMFGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F E+
Sbjct: 145 DYIVPNFYEIQ 155
>gi|191169662|ref|ZP_03031361.1| hydrogenase-4, G subunit [Escherichia coli B7A]
gi|190900296|gb|EDV60146.1| hydrogenase-4, G subunit [Escherichia coli B7A]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|332087931|gb|EGI93056.1| hydrogenase-4 component G [Shigella boydii 5216-82]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 EQTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWSEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|301156409|emb|CBW15880.1| formate hydrogenlyase subunit 5 [Haemophilus parainfluenzae T3T1]
Length = 576
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ + + F ++ S +++L + L + +L + + G D
Sbjct: 17 KNYIEAVNAKFPNTILDEEWSTPNQVTLTIKTNMLPDVVEYLYYQHE---GWLPLVFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
S + V Y S + + + I PS+ A W ERE++DMYG
Sbjct: 74 ERSIHGNYAVYYVL-SMEGEVKTFITIKALVDPVSLEFPSVTPKVKAAVWGERELFDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 133 LKAVGLPDQRRLVLPDDWPDDLYPLRKD 160
>gi|209919963|ref|YP_002294047.1| hydrogenase 4 membrane subunit [Escherichia coli SE11]
gi|307312519|ref|ZP_07592152.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli W]
gi|309794469|ref|ZP_07688892.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
145-7]
gi|209913222|dbj|BAG78296.1| hydrogenase 4 membrane subunit [Escherichia coli SE11]
gi|306907442|gb|EFN37946.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli W]
gi|308121925|gb|EFO59187.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
145-7]
gi|315061806|gb|ADT76133.1| hydrogenase 4, subunit [Escherichia coli W]
gi|320200047|gb|EFW74636.1| Hydrogenase-4 component G [Escherichia coli EC4100B]
gi|323184456|gb|EFZ69831.1| hydrogenase-4 component G [Escherichia coli 1357]
gi|323377613|gb|ADX49881.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Escherichia coli
KO11]
gi|324020086|gb|EGB89305.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
117-3]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|331664044|ref|ZP_08364954.1| hydrogenase-4 component G [Escherichia coli TA143]
gi|331059843|gb|EGI31820.1| hydrogenase-4 component G [Escherichia coli TA143]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|170680711|ref|YP_001744670.1| hydrogenase-4, G subunit [Escherichia coli SMS-3-5]
gi|300940271|ref|ZP_07154868.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
21-1]
gi|301024709|ref|ZP_07188352.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
69-1]
gi|170518429|gb|ACB16607.1| hydrogenase-4, G subunit [Escherichia coli SMS-3-5]
gi|300396440|gb|EFJ79978.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
69-1]
gi|300454912|gb|EFK18405.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
21-1]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|323169074|gb|EFZ54751.1| hydrogenase-4 component G [Shigella sonnei 53G]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|256017366|ref|ZP_05431231.1| hydrogenase 4 membrane subunit [Shigella sp. D9]
gi|332278365|ref|ZP_08390778.1| hydrogenase 4 subunit [Shigella sp. D9]
gi|332100717|gb|EGJ04063.1| hydrogenase 4 subunit [Shigella sp. D9]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|188492803|ref|ZP_03000073.1| hydrogenase-4, G subunit [Escherichia coli 53638]
gi|188488002|gb|EDU63105.1| hydrogenase-4, G subunit [Escherichia coli 53638]
Length = 533
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|187733753|ref|YP_001881277.1| hydrogenase-4, G subunit [Shigella boydii CDC 3083-94]
gi|187430745|gb|ACD10019.1| hydrogenase-4, G subunit [Shigella boydii CDC 3083-94]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|323345258|ref|ZP_08085481.1| NADH dehydrogenase I subunit D [Prevotella oralis ATCC 33269]
gi|323093372|gb|EFZ35950.1| NADH dehydrogenase I subunit D [Prevotella oralis ATCC 33269]
Length = 523
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSPKYNRRLRVK 90
++ D VS L+++ H F ++ + G DF ++ + S + +
Sbjct: 6 IEFQAADFVSEMKKLKNEKH--FDYLVTIVGEDFGEEGLGCIYILENTESHERISVKAIA 63
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
+ E + S+ + AD+ EREV+D GI F GHPD+RR+ F G+PLRK++
Sbjct: 64 KQIGEDYVLDSVTNSWKAADFLEREVYDFLGIKFLGHPDMRRLYLRNDFVGYPLRKNYDT 123
Query: 151 T 151
Sbjct: 124 A 124
>gi|293410882|ref|ZP_06654458.1| hydrogenase-4 component G [Escherichia coli B354]
gi|291471350|gb|EFF13834.1| hydrogenase-4 component G [Escherichia coli B354]
Length = 577
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 17 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 74 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 133 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 160
>gi|293446841|ref|ZP_06663263.1| hyfG [Escherichia coli B088]
gi|291323671|gb|EFE63099.1| hyfG [Escherichia coli B088]
Length = 577
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 17 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 73
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 74 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 132
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 133 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 160
>gi|323977335|gb|EGB72421.1| respiratory-chain NADH dehydrogenase [Escherichia coli TW10509]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|293415750|ref|ZP_06658393.1| hyfG hydrogenase 4 subunit [Escherichia coli B185]
gi|291433398|gb|EFF06377.1| hyfG hydrogenase 4 subunit [Escherichia coli B185]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|182412568|ref|YP_001817634.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Opitutus terrae
PB90-1]
gi|177839782|gb|ACB74034.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Opitutus terrae
PB90-1]
Length = 274
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
V +V L + + GVD+++++ V F + R +
Sbjct: 162 VAPDQVVPAAQLL----DAQGFGLDAVTGVDWIAQNEMEVVYDFFHPTEQLRVVVRTRVP 217
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+P+I ++PGA+W ERE D +GI F GHP L L + HPLRKD+
Sbjct: 218 RANPELPTISTVFPGANWHERETHDFFGIRFAGHPQLTPFLLPEDADFHPLRKDY 272
>gi|331678472|ref|ZP_08379147.1| hydrogenase-4 component G [Escherichia coli H591]
gi|331074932|gb|EGI46252.1| hydrogenase-4 component G [Escherichia coli H591]
Length = 570
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 26 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 82
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 83 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 141
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 142 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 169
>gi|323967931|gb|EGB63343.1| respiratory-chain NADH dehydrogenase [Escherichia coli M863]
gi|327252137|gb|EGE63809.1| hydrogenase-4 component G [Escherichia coli STEC_7v]
Length = 571
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|260845119|ref|YP_003222897.1| hydrogenase 4, subunit HyfG [Escherichia coli O103:H2 str. 12009]
gi|257760266|dbj|BAI31763.1| hydrogenase 4, subunit HyfG [Escherichia coli O103:H2 str. 12009]
Length = 555
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|331669227|ref|ZP_08370075.1| hydrogenase-4 component G [Escherichia coli TA271]
gi|323170247|gb|EFZ55900.1| hydrogenase-4 component G [Escherichia coli LT-68]
gi|331064421|gb|EGI36332.1| hydrogenase-4 component G [Escherichia coli TA271]
Length = 555
Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|66876450|gb|AAY58006.1| NdhJ [Evolvulus glomeratus]
Length = 165
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 14/138 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD-----------FLSRSNRFDVVYHFL 79
+L + D S+ L + + C D L+R +
Sbjct: 28 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVTRIEYG 84
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + A + +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 85 AYQPEEVCIKVFASRKNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESW 144
Query: 140 EGHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 145 IGWPLRKDYVAPHFYEIQ 162
>gi|114329659|ref|YP_740478.1| NADH-plastoquinone oxidoreductase subunit J [Citrus sinensis]
gi|122166180|sp|Q09MH5|NDHJ_CITSI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|113952625|gb|ABI49023.1| NADH-plastoquinone oxidoreductase subunit J [Citrus sinensis]
Length = 158
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSVAVILYI---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ +PS+ ++ A++ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|193064709|ref|ZP_03045787.1| hydrogenase-4, G subunit [Escherichia coli E22]
gi|260869177|ref|YP_003235579.1| hydrogenase 4, subunit HyfG [Escherichia coli O111:H- str. 11128]
gi|192927592|gb|EDV82208.1| hydrogenase-4, G subunit [Escherichia coli E22]
gi|257765533|dbj|BAI37028.1| hydrogenase 4, subunit HyfG [Escherichia coli O111:H- str. 11128]
gi|323159339|gb|EFZ45324.1| hydrogenase-4 component G [Escherichia coli E128010]
gi|323177393|gb|EFZ62981.1| hydrogenase-4 component G [Escherichia coli 1180]
Length = 555
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|320180471|gb|EFW55402.1| Hydrogenase-4 component G [Shigella boydii ATCC 9905]
Length = 571
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 EQTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWSEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|214028126|gb|ACJ63331.1| NADH dehydrogenase subunit J [Gonystylus borneensis]
Length = 143
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L C + + C D V + +
Sbjct: 13 TLQIKPEDWHSIAVILYV---CGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 69
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFAPRTHPRIPSVFWVWKSADFQERESYDMLGISYKNHPRLKRILMPESWIGWPLRK 129
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 130 DYIAPNFXEIQ 140
>gi|214028118|gb|ACJ63327.1| NADH dehydrogenase subunit J [Gonystylus macrophyllus]
gi|214028122|gb|ACJ63329.1| NADH dehydrogenase subunit J [Arnhemia cryptantha]
gi|214028124|gb|ACJ63330.1| NADH dehydrogenase subunit J [Lethedon cernua]
Length = 143
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L C + + C D V + +
Sbjct: 13 TLQIKPEDWHSIAVILYV---CGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 69
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFAPRTHPRIPSVFWVWKSADFQERESYDMLGISYKNHPRLKRILMPESWIGWPLRK 129
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 130 DYIAPNFYEIQ 140
>gi|295136983|ref|YP_003587529.1| NADH dehydrogenase subunit J [Pisum sativum]
gi|293338555|gb|ADE43528.1| NADH dehydrogenase subunit J [Pisum sativum]
Length = 158
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + S +
Sbjct: 28 TLQIKPEDWHSIAVILYVS---GYNYLRSQCAYDVAPGGLLASVYHLTRIEYSLDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTPRQNPRIPSLFWVWKSADFQERESYDMLGIHYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|108804468|ref|YP_644405.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rubrobacter
xylanophilus DSM 9941]
gi|108765711|gb|ABG04593.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rubrobacter
xylanophilus DSM 9941]
Length = 163
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 6 EDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E L Y+ S + A + L VD G + ++ S R +++ + VD
Sbjct: 12 ERLERYLEGFRSRHGLEEARVEGNTVVLGVDPGSVPAVLSTAR--QSLGILHLSFITVVD 69
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIF 123
+ R+RVK + + + ++ GIYP A+W ERE +DM+G+
Sbjct: 70 RQGSFELTYELLDM----RGARVRVKTVLQGEEPVIDTVTGIYPTANWHEREAYDMFGVA 125
Query: 124 FEGHPDLRRILTDYG-FEGHPLRKDFPVT 151
F GHPDLRR+ F+ HPL K F ++
Sbjct: 126 FRGHPDLRRVYMWQDHFDHHPLLKSFEIS 154
>gi|124027081|ref|YP_001012401.1| NAD(P)H-quinone oxidoreductase subunit J [Hyperthermus butylicus
DSM 5456]
gi|123977775|gb|ABM80056.1| NAD(P)H-quinone oxidoreductase subunit J [Hyperthermus butylicus
DSM 5456]
Length = 174
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 13/151 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E L + N +L V+ + + + L+ + + ++ +
Sbjct: 1 MSVPLEQLAQ----KHGARIEKRTNYH---ALVVEPDRIREVVAELK---NTGYDYLLSI 50
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDM 119
GVD V + S + V+ V + V I +YP A ERE +M
Sbjct: 51 SGVDEPDAKRIRIVYHFARSSNPGDVVAVETVVPRDEPVIDSIHDVYPAALLHEREEHEM 110
Query: 120 YGIFFEGHPDLRRILTDYGFEG--HPLRKDF 148
GI F G+PD R +L + +PLRKDF
Sbjct: 111 LGIVFRGNPDSRHLLLPEDWPEGVYPLRKDF 141
>gi|323944707|gb|EGB40774.1| respiratory-chain NADH dehydrogenase [Escherichia coli H120]
Length = 555
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|300897632|ref|ZP_07116037.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
198-1]
gi|300358632|gb|EFJ74502.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
198-1]
Length = 571
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDKERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|32480846|ref|NP_862757.1| NADH dehydrogenase subunit J [Calycanthus floridus var. glaucus]
gi|75146318|sp|Q7YJW9|NDHJ_CALFG RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|32399382|emb|CAD28724.1| NADH dehydrogenase 19kDa subunit [Calycanthus floridus var.
glaucus]
Length = 158
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + F D+ L+ + +
Sbjct: 28 TLQIKPEDWYSIAVISYVYGYNYLRFQCAYDVAPGGLLASVYYL-TRIQYGVDQPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRKD+
Sbjct: 87 KVFAPRRNPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 IAPNFYEIQ 155
>gi|227357423|ref|ZP_03841777.1| hydrogenase-4, G subunit [Proteus mirabilis ATCC 29906]
gi|227162381|gb|EEI47381.1| hydrogenase-4, G subunit [Proteus mirabilis ATCC 29906]
Length = 577
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 8 LGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ + +L++ V G L + +L + L G D
Sbjct: 19 YVAKVREKFPSAILDEERQTADQLTITVKTGSLPEVVEYLYYGLG---GWLPVLFGNDER 75
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS---VPSIVGIYPGADWFEREVWDMYGIF 123
S + + V Y S + + + + PS+ P A W ERE+ DMYG+
Sbjct: 76 SLNGDYAVYYAL-SMEEGEKCWIVVKAHVSPITLEFPSVTPRVPAAVWGEREIRDMYGLI 134
Query: 124 FEGHPDLRRILTDYGFE--GHPLRKD 147
G PD RR++ + +PLRKD
Sbjct: 135 PVGLPDERRLVLPDDWPEDMYPLRKD 160
>gi|157325533|ref|YP_001468311.1| NADH dehydrogenase subunit J [Ipomoea purpurea]
gi|218527847|sp|A7Y3E0|NDHJ_IPOPU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|66876432|gb|AAY57994.1| NdhJ [Operculina aequisepala]
gi|157056761|gb|ABV02351.1| NADH-plastoquinone oxidoreductase subunit J [Ipomoea purpurea]
Length = 165
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 14/138 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD-----------FLSRSNRFDVVYHFL 79
+L + D S+ L + + C D L+R +
Sbjct: 28 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVTRIEYG 84
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + A + +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 85 AYQPEEVCIKVFASRKNSRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESW 144
Query: 140 EGHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 145 IGWPLRKDYVAPHFYEIQ 162
>gi|326200284|gb|ADZ52323.1| NADH dehydrogenase 19 kDa subunit [Asclepias syriaca]
Length = 158
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L V D +++ ++ F D+ L+ + +
Sbjct: 28 TLQVKPEDWHSIAVILYVYGYNFLRFQCAYDVTPGGLLASVYHL-TRIEYGVDQPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 87 KVFASRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 IAPNFYEIQ 155
>gi|322831878|ref|YP_004211905.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Rahnella sp. Y9602]
gi|321167079|gb|ADW72778.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Rahnella sp. Y9602]
Length = 574
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ + F ++ + + ++ + L + +L + L G D
Sbjct: 15 KEYLAALAKQFPSAILGSEWQTDTQATVTIRLNWLPEVVEWLYYQQG---GWLSVLFGND 71
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ + + Y S + + + + PS+ P A W EREV DMYG
Sbjct: 72 ERTLCGNYALYYVL-SMEKGVKCWITVRAEVDPVSLEFPSVTPRVPAAVWGEREVRDMYG 130
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 131 LRPVGLPDERRLVLPDDWPDDLYPLRKD 158
>gi|309322101|ref|YP_003933917.1| NADH-plastoquinone oxidoreductase subunit J [Erodium texanum]
gi|197131366|gb|ACH47201.1| NADH-plastoquinone oxidoreductase subunit J [Erodium texanum]
gi|300069194|gb|ADJ66316.1| NADH-plastoquinone oxidoreductase subunit J [Erodium texanum]
Length = 158
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKSEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRVECGVDQPEEV 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRNNPGIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWLGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYITPNFYEIQ 155
>gi|269216334|ref|ZP_06160188.1| hydrogenase-4 component G [Slackia exigua ATCC 700122]
gi|269130593|gb|EEZ61671.1| hydrogenase-4 component G [Slackia exigua ATCC 700122]
Length = 573
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 16/158 (10%)
Query: 2 VRKIEDL------GDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCF 54
++ ++L + + N F GSV A +L + V L + FL D
Sbjct: 1 MKNKKELRIGETHVEAVRNRFPGSVVDASWQGEDQLCVTVKLDMLPDVVEFLYYD---RG 57
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS---VPSIVGIYPGADW 111
+ + G D + + + Y S + R + + V PS+ P A W
Sbjct: 58 GWMPVMVGNDERPLNGNYALYYIL-SMEDEDRCFLTVRVEVPPEPGEYPSVTPRVPAAVW 116
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV+DM+G+ G D RR++ + +PLRKD
Sbjct: 117 SEREVYDMFGLRAIGIIDNRRLVLPDDWPEGLYPLRKD 154
>gi|197286369|ref|YP_002152241.1| hydrogenase-4 component G [Proteus mirabilis HI4320]
gi|194683856|emb|CAR44989.1| hydrogenase-4 component G [Proteus mirabilis HI4320]
Length = 577
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 8 LGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ + +L++ V G L + +L + L G D
Sbjct: 19 YIAKVREKFPSAILDEERQTADQLTITVKTGSLPEVVEYLYYGLG---GWLPVLFGNDER 75
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS---VPSIVGIYPGADWFEREVWDMYGIF 123
S + + V Y S + + + + PS+ P A W ERE+ DMYG+
Sbjct: 76 SLNGDYAVYYAL-SMEEGEKCWIVVKAHVSPITLEFPSVTPRVPAAVWGEREIRDMYGLI 134
Query: 124 FEGHPDLRRILTDYGFE--GHPLRKD 147
G PD RR++ + +PLRKD
Sbjct: 135 PVGLPDERRLVLPDDWPEDMYPLRKD 160
>gi|46577626|sp|Q85BB2|NDHJ_ANTFO RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|27807877|dbj|BAC55352.1| NADH dehydrogenase 30 kDa subunit [Anthoceros formosae]
gi|27807999|dbj|BAC55445.1| NADH dehydrogenase 30 kDa subunit [Anthoceros formosae]
Length = 169
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 15/169 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGEL--------SLDVDCGDLVSLCSFLRDDPHC 52
M+ + + I S + + L +L V D +S+ L
Sbjct: 1 MLETFTNDTNEIQGRLSAWLIKHRLAHRPLGFDYQGVETLQVRSEDWLSIAVAL---YAY 57
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAV-AEGKSVPSIVGIYPG 108
F + C D V + + + +KI V + +PS+ ++ G
Sbjct: 58 GFNYLRSQCVYDVAPGGLLASVYHLTKVQSNADQPEEVCIKIFVSRKNPKIPSVFWVWKG 117
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ V F EL
Sbjct: 118 ADFQERESYDMLGISYESHPRLKRILMPDSWIGWPLRKDYIVPNFYELQ 166
>gi|254173187|ref|ZP_04879860.1| Ni,Fe-hydrogenase III large subunit [Thermococcus sp. AM4]
gi|214032596|gb|EEB73425.1| Ni,Fe-hydrogenase III large subunit [Thermococcus sp. AM4]
Length = 599
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 21/187 (11%)
Query: 14 NSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+F ++ S GE +D L + + P ++ G D + F
Sbjct: 43 EAFREHIKECKRMSYGEYQFVIDREVLPEAVLWWHNHPEFKETHLSTAVGTDERPLNGHF 102
Query: 73 ------DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDMYGIFFE 125
+V L+ N + +K + V P A W EREV D+ G
Sbjct: 103 VYMPFLNVQVEPLNMDENYWVFLKAYLPADDPSFPSVAAKLPAALWIEREVKDLLGFNPI 162
Query: 126 GHPDLRRILTDYGFEG--HPLRK--DFPVTGFVELHYDDKVK-----KVVYRPVELMQE- 175
GHPD RR++ + +PLRK D+ + E+ + K K V PV + E
Sbjct: 163 GHPDPRRLILPEDWPDGVYPLRKDMDYRHSPMAEVKTEFKEKPEGTTLVPMGPVHMGIEE 222
Query: 176 ---HRDY 179
R +
Sbjct: 223 PAHFRLF 229
>gi|290524867|gb|ADD31274.1| NADH-plastoquinone oxidoreductase subunit J protein [Gunnera
manicata]
Length = 158
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + + +
Sbjct: 28 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHITRIQYGADQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290558865|gb|EFD92256.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Candidatus
Parvarchaeum acidophilus ARMAN-5]
Length = 131
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 54 FVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFE 113
F + L VD+ V ++ + + + S+ SI I+ A+W E
Sbjct: 23 FDILYTLTVVDYSPVFELNYVFSNYENDDIL--IVKGNLDEKDLSIDSITDIFDSANWEE 80
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
RE +D++GI F GHPDLRRIL + GHPLRK F + E+
Sbjct: 81 REAYDLFGIKFNGHPDLRRILLPEDWPGHPLRKSFEIND--EVR 122
>gi|288961305|ref|YP_003451644.1| NADH dehydrogenase (ubiquinone) [Azospirillum sp. B510]
gi|288913613|dbj|BAI75100.1| NADH dehydrogenase (ubiquinone) [Azospirillum sp. B510]
Length = 571
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 10/142 (7%)
Query: 12 IVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ S ++ ++++ V L + + L D + + + G D +
Sbjct: 17 LRESLPHAIIDESWQTESQVTITVKPVSLPDVVASLYYDHN---GWLSVVVGNDERPLNG 73
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ V Y S + + V + + PS+ P W EREV DM+G+ G
Sbjct: 74 GYAVYYVL-SMEGGDKCHVVVRCEVPADTLEYPSVTPRVPACVWGEREVRDMFGLRPVGL 132
Query: 128 PDLRRILTDYGFEG--HPLRKD 147
PD RR++ + +PLRKD
Sbjct: 133 PDERRLVLPDDWPDELYPLRKD 154
>gi|290524871|gb|ADD31276.1| NADH-plastoquinone oxidoreductase subunit J protein [Liquidambar
styraciflua]
Length = 158
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWYSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIECGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ G V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRGNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|309322235|ref|YP_003934313.1| NADH-plastoquinone oxidoreductase subunit J [Monsonia speciosa]
gi|197131374|gb|ACH47205.1| NADH-plastoquinone oxidoreductase subunit J [Monsonia speciosa]
gi|300069328|gb|ADJ66448.1| NADH-plastoquinone oxidoreductase subunit J [Monsonia speciosa]
Length = 158
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
++ + D S+ L + + C D V + +
Sbjct: 28 TVQIKPEDWQSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRVECGVDQPEEV 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PSI ++ AD+ ERE +DM GI ++ HP L RIL + G PLRK
Sbjct: 85 CIKVFVPRNNPGIPSIFWVWKSADFQERESYDMLGISYDNHPRLSRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYLAPNFYEIQ 155
>gi|320176268|gb|EFW51329.1| Hydrogenase-4 component G [Shigella dysenteriae CDC 74-1112]
Length = 525
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|119871849|ref|YP_929856.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pyrobaculum
islandicum DSM 4184]
gi|119673257|gb|ABL87513.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pyrobaculum
islandicum DSM 4184]
Length = 177
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 8 LGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L + + + ++ V G L L V G + + + L+ F +++ L VD++
Sbjct: 17 LLEKLKAALGDAILNHGVTPEGHLCLMVPPGKVREVATKLK---ELGFDHVLSLSAVDYM 73
Query: 67 SRSNRFDVVYHFLSPKYNRR---LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
+ + + + L V+ + + SI IYP AD+ ERE +M+GI
Sbjct: 74 AEGKFLVTYVYASYLNPDLKNQLLHVRAEIPRNDPKIASIADIYPSADYDERECHEMFGI 133
Query: 123 FFEGHPDL-RRILTDYG--------FEGHPLRKDF 148
+FEG+P + +R L D +PLRKDF
Sbjct: 134 WFEGNPHMGKRFLLDPDCCIDEKTGKPLYPLRKDF 168
>gi|258514105|ref|YP_003190327.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfotomaculum
acetoxidans DSM 771]
gi|257777810|gb|ACV61704.1| Hydrogenase, large subunit-like protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 525
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
+ L V + L+ + ++ + GVD + F V F P +
Sbjct: 30 IKLGVPAASFMETVKRLKAEGAY----LLTMTGVDERDYNGHFSVYSVFGLPGDTTLVET 85
Query: 90 KIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRK 146
KI + + I + P A W ERE+ DM GI GHPDLRR+ + P+RK
Sbjct: 86 KIVLNAENPTFTSISPVMPSAHWLEREIKDMLGIVPYGHPDLRRVAVHPDWPQDVFPMRK 145
Query: 147 DF 148
DF
Sbjct: 146 DF 147
>gi|78043379|ref|YP_360255.1| NADH dehydrogenase subunit C [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995494|gb|ABB14393.1| proton-translocating NADH-quinone oxidoreductase, C subunit
[Carboxydothermus hydrogenoformans Z-2901]
Length = 143
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+ + +++++ ++D F + +L VD+ Y+
Sbjct: 23 IIVKNKDEILNVLREIKD---MGFELLTNLTAVDYPPERFEIVYHVESFLNNYDIITVKT 79
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
E +PS I+P ADW EREV+D+ GI FE HP L R+ FEG PLRKD+ V
Sbjct: 80 SVNRENPRIPSAFSIWPAADWQEREVYDLMGIVFENHPHLTRVFLGEDFEGFPLRKDYKV 139
Query: 151 T 151
Sbjct: 140 Q 140
>gi|147835949|emb|CAN68411.1| hypothetical protein VITISV_037504 [Vitis vinifera]
Length = 148
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+L + D S+ L + + C D S + R+
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGG-------LLASVYHLTRIEYG 77
Query: 91 I-AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 78 YLPSRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYI 137
Query: 150 VTGFVELH 157
F E+
Sbjct: 138 APNFYEIQ 145
>gi|75294072|sp|Q6YXQ8|NDHJ_PHYPA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|34494782|dbj|BAC85049.1| NADH dehydrogenase 30 kD subunit [Physcomitrella patens subsp.
patens]
Length = 169
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 15/169 (8%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGEL--------SLDVDCGDLVSLCSFLRDDPHC 52
M+ + I S + L L + D +S+ L
Sbjct: 1 MLNTYTNSSTKIQGRLSVWLANHKLPHRPLGFDYQGVEILQIRSEDWLSIAVALYV---Y 57
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKS-VPSIVGIYPG 108
F + C D V + + + +KI V+ K +PS+ I+
Sbjct: 58 GFNYLRSQCAYDVAPGGLLASVYHFTKIEDNVDQPEEICIKIFVSRQKPKIPSVFWIWKS 117
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ V F EL
Sbjct: 118 ADFQERESYDMLGISYENHPRLKRILMPDTWIGWPLRKDYIVPDFYELQ 166
>gi|260913688|ref|ZP_05920164.1| hydrogenase-4 component G [Pasteurella dagmatis ATCC 43325]
gi|260632227|gb|EEX50402.1| hydrogenase-4 component G [Pasteurella dagmatis ATCC 43325]
Length = 574
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++ + F ++ S +++L + L + +L + + + L G D
Sbjct: 15 KNYVAALAQKFPNTILEEEWSTDDQVTLTIKTNMLPEVVEWLYYENN---GWLSVLFGND 71
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + V I PS+ P A W EREV DMYG
Sbjct: 72 ERALNGHYAVYYVL-SMEGDIKSWVVIKALVDANTLEYPSVTPRVPAAVWGEREVRDMYG 130
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 131 LIPVGLPDERRLVLPDDWPDGLYPLRKD 158
>gi|290524855|gb|ADD31268.1| NADH-plastoquinone oxidoreductase subunit J protein [Rhododendron
simsii]
Length = 158
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D + V + +
Sbjct: 28 TLQIKPEDWHSIAIILYV---YGYNYLRSQCAYDVVPGGQLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 RIKVFAPRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|240102302|ref|YP_002958610.1| formate hydrogenlyase I subunit F (Mhy1F) [Thermococcus
gammatolerans EJ3]
gi|239909855|gb|ACS32746.1| formate hydrogenlyase I subunit F (Mhy1F) [Thermococcus
gammatolerans EJ3]
Length = 601
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 10/144 (6%)
Query: 14 NSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS----- 67
+F +R + G+ +D L + + P ++ G D
Sbjct: 45 EAFKEHIRECKRMTYGQYMFVIDREVLPDAVLWWHNHPEFKETHLSTAVGTDERPLNGKF 104
Query: 68 -RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVG-IYPGADWFEREVWDMYGIFFE 125
+V + N + +K + V P A W EREV D+ G
Sbjct: 105 VYMPFLNVQVEPQNMDENYWVFLKAYMPADDPSFPSVAAKLPAALWIEREVKDLLGFNPV 164
Query: 126 GHPDLRRILTDYGFEG--HPLRKD 147
GHPD RR++ + +PLRKD
Sbjct: 165 GHPDPRRLILPEDWPEGVYPLRKD 188
>gi|238921132|ref|YP_002934647.1| hydrogenase-4 component G [Edwardsiella ictaluri 93-146]
gi|238870701|gb|ACR70412.1| hydrogenase-4 component G [Edwardsiella ictaluri 93-146]
Length = 566
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + F ++ + ++ V L + +L + L G D
Sbjct: 7 QHYIAALRQQFPHAIIEESWQTDTQTTITVKTDMLPEVVEYLYYQQG---GWLSVLFGND 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ V Y S + + + + + PS+ P A W EREV DMYG
Sbjct: 64 ERPLCGSYAVYYVL-SMERGTKCWITVKALVDATTREYPSVTPRVPAAVWGEREVRDMYG 122
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 123 LIAVGLPDERRLVLPDDWPDDLYPLRKD 150
>gi|126022790|ref|NP_039301.2| NADH dehydrogenase subunit J [Marchantia polymorpha]
Length = 158
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D SL L F + C D V + + +
Sbjct: 28 TLQIRSEDWPSLAVALYV---YGFNYLRSQCAYDVEPGGLLASVYHFTKITDNADQPEEI 84
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI + + +PSI ++ AD+ ERE +DM+GIF+E HP L+RIL + G PLRK
Sbjct: 85 CIKIFILRKNPKIPSIFWVWKSADFQERESYDMFGIFYENHPCLKRILMPDSWLGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 145 DYIVPNFYELQ 155
>gi|128856|sp|P12199|NDHJ_MARPO RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|11675|emb|CAA28087.1| unnamed protein product [Marchantia polymorpha]
Length = 169
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D SL L F + C D V + + +
Sbjct: 39 TLQIRSEDWPSLAVALYV---YGFNYLRSQCAYDVEPGGLLASVYHFTKITDNADQPEEI 95
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI + + +PSI ++ AD+ ERE +DM+GIF+E HP L+RIL + G PLRK
Sbjct: 96 CIKIFILRKNPKIPSIFWVWKSADFQERESYDMFGIFYENHPCLKRILMPDSWLGWPLRK 155
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 156 DYIVPNFYELQ 166
>gi|311086471|gb|ADP66552.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Buchnera
aphidicola str. TLW03 (Acyrthosiphon pisum)]
Length = 515
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFEG 126
F V YH +S + N + +K+ + E + G++P A+W+ERE WDM+GI F
Sbjct: 7 PKADFSVFYHLISIERNSDIMIKVPLLENDLILPTFTGLFPNANWYERETWDMFGIIFNN 66
Query: 127 HPDLRRILTDYGFEGHPLRKDF 148
HP+L RI+ ++GHPLRK++
Sbjct: 67 HPNLTRIIMPSTWKGHPLRKNY 88
>gi|312973275|ref|ZP_07787447.1| hydrogenase-4 component G [Escherichia coli 1827-70]
gi|310331870|gb|EFP99105.1| hydrogenase-4 component G [Escherichia coli 1827-70]
Length = 571
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDIVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|256021827|ref|ZP_05435692.1| hydrogenase 4, subunit [Escherichia sp. 4_1_40B]
Length = 555
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTIAVKINLLPDVVQYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|149194130|ref|ZP_01871228.1| HYDROGENASE 4 SUBUNIT [Caminibacter mediatlanticus TB-2]
gi|149136083|gb|EDM24561.1| HYDROGENASE 4 SUBUNIT [Caminibacter mediatlanticus TB-2]
Length = 579
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 21/157 (13%)
Query: 9 GDYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
G+ +N V+ S ++ + V DLV L D ++ + D
Sbjct: 4 GEKFINKLKEKVKVLDVSYSTPDQVVVLVPRSDLVEAVRMLYYDMG---GWLVSMIPNDE 60
Query: 66 LSRSNRFDVVYHFLS------------PKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWF 112
+ + + Y + +K + E + P A W+
Sbjct: 61 REMNGHYALYYILSMEGGKMTPDDELPQDEKCFITIKTLIPETDPTYPSVTTKVPAAVWY 120
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
ERE +DM+G+ EG PD RR++ + HPLRKD
Sbjct: 121 EREAYDMFGLVAEGLPDKRRLVLPDDWPENIHPLRKD 157
>gi|309702765|emb|CBJ02096.1| hydrogenase-4 component G [Escherichia coli ETEC H10407]
gi|323936379|gb|EGB32669.1| respiratory-chain NADH dehydrogenase [Escherichia coli E1520]
Length = 571
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDIVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|315608359|ref|ZP_07883348.1| NADH-quinone oxidoreductase subunit C/D [Prevotella buccae ATCC
33574]
gi|315249989|gb|EFU29989.1| NADH-quinone oxidoreductase subunit C/D [Prevotella buccae ATCC
33574]
Length = 520
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 37 GDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAE 95
+ VS + L+++ H F ++ + G DF ++ + + + ++ + +
Sbjct: 11 DNFVSEMTKLKNEKH--FDYLVTIVGEDFGEEGLGCIYILENTDTHERVSVKQIAKQIGD 68
Query: 96 GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
+P+ ++ ++ EREV+D GI F GHPD+RR+ F+G+PLRKDF G
Sbjct: 69 DHVLPTTYHLWKISNLLEREVYDFLGIKFLGHPDMRRLYLRNDFKGYPLRKDFRPEGTYS 128
Query: 156 LHYDDK 161
L D++
Sbjct: 129 LVDDEE 134
>gi|317046176|ref|YP_004072465.1| NADH dehydrogenase 19 kDa subunit [Corynocarpus laevigata]
gi|309252893|gb|ADO60313.1| NADH dehydrogenase 19 kDa subunit [Corynocarpus laevigata]
Length = 158
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ VA V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFVARRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|172072908|ref|YP_001806669.1| NADH dehydrogenase subunit J [Cryptomeria japonica]
gi|218527825|sp|B1VKF6|NDHJ_CRYJA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|171854927|dbj|BAG16667.1| NADH-plastoquinone oxidoreductase subunit J [Cryptomeria japonica]
gi|239794296|dbj|BAH73293.1| NADH-plastoquinone oxidoreductase subunit J [Cryptomeria japonica]
gi|239794378|dbj|BAH73374.1| NADH-plastoquinone oxidoreductase subunit J [Cryptomeria japonica]
Length = 158
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D VS+ L F + C D + V + + +
Sbjct: 28 TLQIKAEDWVSIAVALYV---YGFNYLRSQCAYDVAPGGSLASVYHLTKINDNADQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V I+ GA++ ERE +DM GIF+E HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPREDPRIPSVLRIWKGANFQERESYDMLGIFYESHPCLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPDFYEIQ 155
>gi|170289384|ref|YP_001739622.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermotoga sp. RQ2]
gi|170176887|gb|ACB09939.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermotoga sp. RQ2]
Length = 175
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 8/174 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F V E+ L V ++++ L+ + ++ +
Sbjct: 1 MTNSMSDALKTL-EVFRPEVEEIDER--EVKLSVAPDRIIAVLETLK---SLGYSHLSLM 54
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+D++ S V F + + ++ I+P A ++ERE+ + +
Sbjct: 55 TCIDWIEDSQFELVYILFSWKDGGKFIVTTRIDRNNPQFVTVKEIWPVARFYEREIHEFF 114
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY--DDKVKKVVYRPVEL 172
G+ F G+ D++ + + + PLRKDF + + + K V+ ++
Sbjct: 115 GVKFSGNEDMKPLFLELWDDKPPLRKDFDPLEYSRRKFPGREYQKDVIDEAKKI 168
>gi|164512912|emb|CAP11549.1| NADH dehydrogenase subunit J [Betula insignis]
gi|164512914|emb|CAP11550.1| NADH dehydrogenase subunit J [Betula pendula]
Length = 140
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 10 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIAYGIDQPEEV 66
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 67 CIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGIIYDNHPRLKRILMPESWIGWPLRK 126
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 127 DYIAPNFYEIQ 137
>gi|74313013|ref|YP_311432.1| hydrogenase 4 subunit [Shigella sonnei Ss046]
gi|73856490|gb|AAZ89197.1| hydrogenase 4 subunit [Shigella sonnei Ss046]
Length = 571
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDNWPEDMHPLRKD 154
>gi|239799440|dbj|BAH70640.1| ACYPI004451 [Acyrthosiphon pisum]
Length = 171
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
G+++ ++ S EL L + ++ + FL++ +C F N+ DLC VD
Sbjct: 53 FGNFVAECLPKYIQKIQISSKNELELLIAPEGVLPVFHFLKNQTNCQFANLSDLCAVDVP 112
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFE 113
RSNRF++VY+ LS ++N R+RVK E + SI IY A+W+E
Sbjct: 113 QRSNRFEIVYNLLSLRFNTRIRVKTYTDELTPIDSITSIYEAANWYE 159
>gi|115531918|ref|YP_784074.1| NADH-plastoquinone oxidoreductase subunit J [Pelargonium x
hortorum]
gi|122164276|sp|Q06FV7|NDHJ_PELHO RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|112382072|gb|ABI17265.1| NADH-plastoquinone oxidoreductase subunit J [Pelargonium x
hortorum]
Length = 158
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L++ D S+ L + + C D V + +
Sbjct: 28 TLEIKSEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHFTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ +A I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFLARSNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|284922434|emb|CBG35521.1| hydrogenase-4 component G [Escherichia coli 042]
Length = 571
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKMQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|290524873|gb|ADD31277.1| NADH-plastoquinone oxidoreductase subunit J protein [Oxalis
latifolia]
Length = 158
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L V D S+ L + + C D V + +
Sbjct: 28 TLQVKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|288926086|ref|ZP_06420014.1| NADH dehydrogenase I, D subunit [Prevotella buccae D17]
gi|288337126|gb|EFC75484.1| NADH dehydrogenase I, D subunit [Prevotella buccae D17]
Length = 520
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 37 GDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAE 95
+ VS + L+++ H F ++ + G DF ++ + + + ++ + +
Sbjct: 11 DNFVSEMTKLKNEKH--FDYLVTIVGEDFGEEGLGCIYILENTDTHERVSVKQIAKQIGD 68
Query: 96 GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
+P+ ++ ++ EREV+D GI F GHPD+RR+ F+G+PLRKDF G
Sbjct: 69 NYVLPTTYHLWKISNLLEREVYDFLGIKFLGHPDMRRLYLRNDFKGYPLRKDFRPEGTYS 128
Query: 156 LHYDDK 161
L D++
Sbjct: 129 LVDDEE 134
>gi|332161097|ref|YP_004297674.1| hydrogenase-4 component G [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604976|emb|CBY26474.1| formate hydrogenlyase subunit 5 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665327|gb|ADZ41971.1| hydrogenase-4 component G [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 596
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + +L + L G D
Sbjct: 26 YVARLREQFPTAILDEEWQTPDQLTITIKLNSLPDVVEYLYYQQG---GWLSVLFGNDER 82
Query: 67 SRSNRFDVVYHFLSPKYNRR--------------LRVKIAVAEGKSVPSIVGIYPGADWF 112
S + F + Y + + + E PS+ P A W
Sbjct: 83 SLNGYFAIYYVLSMEGREQYGIDTGKKYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 142
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 143 EREVRDMYGLQPIGLPDERRLVLPDDWPDDLYPLRKD 179
>gi|290524875|gb|ADD31278.1| NADH-plastoquinone oxidoreductase subunit J protein [Plumbago
auriculata]
Length = 158
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDIAPGGLLASVYHLTRIEAGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRKNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYITPNFYEIQ 155
>gi|332999464|gb|EGK19049.1| formate hydrogenlyase subunit 5 [Shigella flexneri VA-6]
Length = 561
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 20/155 (12%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + + V Y S + + V + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
EREV DMYG+ G PD D+ E +PLRKD
Sbjct: 115 EREVRDMYGLIPVGLPD------DWPDELYPLRKD 143
>gi|225544127|ref|YP_002720115.1| ndhJ [Jatropha curcas]
gi|224979568|gb|ACN72695.1| ndhJ [Jatropha curcas]
Length = 158
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRKNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWVGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|238757222|ref|ZP_04618409.1| Formate hydrogenlyase subunit 5 [Yersinia aldovae ATCC 35236]
gi|238704600|gb|EEP97130.1| Formate hydrogenlyase subunit 5 [Yersinia aldovae ATCC 35236]
Length = 596
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + L + L G D
Sbjct: 26 YVARLREQFPTAILDEEWQTPDQLTITIKLNSLPDVVEHLYYQQG---GWLSVLFGNDER 82
Query: 67 SRSNRFDVVYHFLSPKYNRR--------------LRVKIAVAEGKSVPSIVGIYPGADWF 112
S + F + Y + + + E PS+ P A W
Sbjct: 83 SLNGYFAIYYVLSMEGREQYGIDTGKKYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 142
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 143 EREVRDMYGLQPVGLPDERRLVLPDDWPDDLYPLRKD 179
>gi|323148833|ref|YP_004221926.1| NADH-plastoquinone oxidoreductase subunit J [Erodium carvifolium]
gi|316926297|gb|ADU58150.1| NADH-plastoquinone oxidoreductase subunit J [Erodium carvifolium]
Length = 158
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRVECGVDQPEEV 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PSI ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRNNPGIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|284006927|emb|CBA72198.1| hydrogenase-4 component G [Arsenophonus nasoniae]
Length = 569
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + + +F G V + +L++ + L + ++L
Sbjct: 1 MSE--EKLGQHYLTALCQAFPGVVLEEGWQTKDQLTITIKINALPDVIAYLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERKLCGHYAVYYVL-SMEQGSKCWLTVRVEVDADKPEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLR+D
Sbjct: 115 EREVRDMYGLIPVGLPDERRLVLPDDWPDDLYPLRED 151
>gi|242910157|ref|YP_002970647.1| NADH-plastoquinone oxidoreductase subunit J [Alsophila spinulosa]
gi|218454826|gb|ACK77163.1| NADH-plastoquinone oxidoreductase subunit J [Alsophila spinulosa]
Length = 173
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK---YNRRL 87
+L V + +S+ C F + C D V + +
Sbjct: 40 TLQVKAEEWLSVAVAPYV---CGFNYLRSQCAYDAAPGGPLVSVYHLTQVQDEADQPEEV 96
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V + ++ +D+ ERE +DM GI +GHP L+RIL + G PLRK
Sbjct: 97 CIKIFVPRENPRIPSVYWVWKSSDFQERESFDMLGISHQGHPHLKRILMPESWIGWPLRK 156
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 157 DYVVPNFYELQ 167
>gi|110227082|ref|YP_665561.1| NADH dehydrogenase subunit J [Populus alba]
gi|134093202|ref|YP_001109504.1| NADH dehydrogenase subunit J [Populus trichocarpa]
gi|224161421|ref|XP_002338329.1| predicted protein [Populus trichocarpa]
gi|122237045|sp|Q14FF4|NDHJ_POPAL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527864|sp|A4GYR3|NDHJ_POPTR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|109945520|dbj|BAE97208.1| NADH dehydrogenase subunit J [Populus alba]
gi|133712064|gb|ABO36707.1| NADH dehydrogenase subunit [Populus trichocarpa]
gi|222871918|gb|EEF09049.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 8/132 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D + + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASIYHLTRIEYGILDQPEE 84
Query: 87 LRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ +K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 85 VCIKVFAPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 144
Query: 146 KDFPVTGFVELH 157
KD+ F E+
Sbjct: 145 KDYIAPNFYEIQ 156
>gi|164513052|emb|CAP11619.1| NADH dehydrogenase subunit J [Sophora microphylla]
gi|164513054|emb|CAP11620.1| NADH dehydrogenase subunit J [Sophora toromiro]
Length = 140
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 10 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGMLASVYHLTRIEYGIDQPEEV 66
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 67 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 126
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 127 DYIAPKFYEIQ 137
>gi|326909396|ref|YP_004327665.1| NADH dehydrogenase subunit J [Hevea brasiliensis]
gi|308523510|gb|ADO33560.1| NADH dehydrogenase subunit J [Hevea brasiliensis]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYDIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRKNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F E+
Sbjct: 145 DYIVPNFYEIQ 155
>gi|189162274|ref|YP_001936520.1| NADH dehydrogenase subunit J [Fagopyrum esculentum subsp.
ancestrale]
gi|218527830|sp|B2XWK7|NDHJ_FAGEA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|166065360|gb|ABY79735.1| NADH dehydrogenase subunit J [Fagopyrum esculentum subsp.
ancestrale]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V ++ D+ ERE +DM GIF+E HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYENHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524847|gb|ADD31264.1| NADH-plastoquinone oxidoreductase subunit J protein [Lonicera
japonica]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPENWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|313199705|ref|YP_004021319.1| NADH-plastoquinone oxidoreductase subunit J [Theobroma cacao]
gi|309321269|gb|ADO64812.1| NADH-plastoquinone oxidoreductase subunit J [Theobroma cacao]
gi|328924786|gb|ADO64893.2| NADH-plastoquinone oxidoreductase subunit J [Theobroma cacao]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524851|gb|ADD31266.1| NADH-plastoquinone oxidoreductase subunit J protein [Nelumbo
nucifera]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524879|gb|ADD31280.1| NADH-plastoquinone oxidoreductase subunit J protein [Staphylea
colchica]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLGSVYHLTRIESGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|309322180|ref|YP_003934095.1| NADH-plastoquinone oxidoreductase subunit J [Geranium palmatum]
gi|197131372|gb|ACH47204.1| NADH-plastoquinone oxidoreductase subunit J [Geranium palmatum]
gi|300069273|gb|ADJ66394.1| NADH-plastoquinone oxidoreductase subunit J [Geranium palmatum]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + + D+ L+ + + +
Sbjct: 28 TLQIKPEDWHSIAVILYVYGLNYLRYQCAYDVAPGGLLAS--VYHLTTVECGVDQPEEVC 85
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V +PS+ ++ +D+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 86 IKVFVPRNNPGIPSVFWVWKSSDFQERESYDMLGISYDHHPRLKRILMPESWIGWPLRKD 145
Query: 148 FPVTGFVELH 157
+ F E+
Sbjct: 146 YVAPNFFEIQ 155
>gi|91208906|ref|YP_538938.1| NADH dehydrogenase subunit J [Gossypium hirsutum]
gi|119368502|ref|YP_913190.1| NADH dehydrogenase 30kD subunit [Gossypium barbadense]
gi|325210933|ref|YP_004286007.1| NADH-plastoquinone oxidoreductase subunit J [Gossypium thurberi]
gi|122201393|sp|Q2L910|NDHJ_GOSHI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527831|sp|A0ZZ38|NDHJ_GOSBA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|85687420|gb|ABC73632.1| NADH-plastoquinone oxidoreductase subunit J [Gossypium hirsutum]
gi|119224864|dbj|BAF41250.1| NADH dehydrogenase 30kD subunit [Gossypium barbadense]
gi|290775795|gb|ADD62291.1| NADH-plastoquinone oxidoreductase subunit J [Gossypium thurberi]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ +D+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRSNPRIPSVFWVWKSSDFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|313183825|ref|YP_004021668.1| NADH-plastoquinone oxidoreductase subunit J [Prunus persica]
gi|309321437|gb|ADO64978.1| NADH-plastoquinone oxidoreductase subunit J [Prunus persica]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ I ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSIFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|238749931|ref|ZP_04611435.1| Formate hydrogenlyase subunit 5 [Yersinia rohdei ATCC 43380]
gi|238711860|gb|EEQ04074.1| Formate hydrogenlyase subunit 5 [Yersinia rohdei ATCC 43380]
Length = 598
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + L + L G D
Sbjct: 28 YVARLREQFPAAILDEEWQTPDQLTITIKLNSLPEVVEHLYYQQG---GWLSVLFGNDER 84
Query: 67 SRSNRFDVVYHFLSPKYNRR--------------LRVKIAVAEGKSVPSIVGIYPGADWF 112
S + F + Y + + + E PS+ P A W
Sbjct: 85 SLNGYFAIYYVLSMEGREQYGIDTGKQYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 144
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 145 EREVRDMYGLQPIGLPDERRLVLPDDWPDDLYPLRKD 181
>gi|325126868|ref|YP_004286105.1| NADH-plastoquinone oxidoreductase subunit J [Fragaria vesca subsp.
vesca]
gi|324022780|gb|ADY15354.1| NADH-plastoquinone oxidoreductase subunit J [Fragaria vesca subsp.
vesca]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|197131378|gb|ACH47207.1| NADH-plastoquinone oxidoreductase subunit J [Pelargonium
cotyledonis]
Length = 158
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHFTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFLPRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290790783|gb|ADD63040.1| NADH-plastoquinone oxidoreductase subunit J [Potamophila
parviflora]
Length = 188
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + D S+ L + + C D + V +
Sbjct: 52 DHRGIETLQIKAEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 108
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 109 DNPEEVCIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWI 168
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 169 GWPLRKDYITPNFYEIQ 185
>gi|13518308|ref|NP_084667.1| NADH dehydrogenase subunit J [Oenothera elata subsp. hookeri]
gi|169142698|ref|YP_001687125.1| NADH dehydrogenase subunit J [Oenothera argillicola]
gi|169142848|ref|YP_001687271.1| NADH dehydrogenase subunit J [Oenothera glazioviana]
gi|169142933|ref|YP_001687355.1| NADH dehydrogenase subunit J [Oenothera biennis]
gi|169143019|ref|YP_001687439.1| NADH dehydrogenase subunit J [Oenothera parviflora]
gi|22256941|sp|Q9MTP3|NDHJ_OENEH RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527857|sp|B0Z4L4|NDHJ_OENAR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527858|sp|B0Z4U8|NDHJ_OENBI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527859|sp|B0Z532|NDHJ_OENGL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527860|sp|B0Z5B6|NDHJ_OENPA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|6723723|emb|CAB67132.1| NADH dehydrogenase subunit J [Oenothera elata subsp. hookeri]
gi|159792936|gb|ABW98692.1| NADH dehydrogenase subunit J [Oenothera argillicola]
gi|159793106|gb|ABW98860.1| NADH dehydrogenase subunit J [Oenothera biennis]
gi|159895460|gb|ABX10025.1| NADH dehydrogenase subunit J [Oenothera glazioviana]
gi|159895545|gb|ABX10109.1| NADH dehydrogenase subunit J [Oenothera parviflora]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + + S+ L + + C D V + +
Sbjct: 28 TLQIKPEEWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQAEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRNNPRIPSVFWVWKSADFQERESYDMLGIRYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|238793446|ref|ZP_04637071.1| Formate hydrogenlyase subunit 5 [Yersinia intermedia ATCC 29909]
gi|238727219|gb|EEQ18748.1| Formate hydrogenlyase subunit 5 [Yersinia intermedia ATCC 29909]
Length = 606
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + L + L G D
Sbjct: 36 YVARLREQFPAAILDEEWQTPDQLTITIKLNSLPDVVEHLYYQQG---GWLSVLFGNDER 92
Query: 67 SRSNRFDVVYHFLSPKYNRR--------------LRVKIAVAEGKSVPSIVGIYPGADWF 112
S + F + Y + + + E PS+ P A W
Sbjct: 93 SLNGYFAIYYVLSMEGREQYGEETGKQYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 152
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 153 EREVRDMYGLQPVGLPDERRLVLPDDWPDDLYPLRKD 189
>gi|290524869|gb|ADD31275.1| NADH-plastoquinone oxidoreductase subunit J protein [Heuchera
sanguinea]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYAVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|169794076|ref|YP_001718440.1| NADH dehydrogenase subunit J [Manihot esculenta]
gi|218527852|sp|B1NWF3|NDHJ_MANES RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|157695888|gb|ABV66157.1| NADH-plastoquinone oxidoreductase subunit J [Manihot esculenta]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRKNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|306486052|gb|ADM92673.1| NADH-plastoquinone oxidoreductase subunit J [Franklinia alatamaha]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F E+
Sbjct: 145 DYIVPNFYEIQ 155
>gi|11499417|ref|NP_070656.1| F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative
[Archaeoglobus fulgidus DSM 4304]
gi|2648716|gb|AAB89421.1| F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative
[Archaeoglobus fulgidus DSM 4304]
Length = 353
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 13/160 (8%)
Query: 7 DLGDYIVNSFSGSVRFAVNS---VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+ G +V V + +++ V+ + LR F ++ ++ +
Sbjct: 198 EFGQKLVEEIKAKVEAKSVTITGKNRIAVKVESDYIPRAAMRLR---EMGFDHVKNVNVI 254
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAV-----AEGKSVPSIVGIYPGADWFEREVWD 118
D ++F V YHF S + V + V E V S+ ++P AD+ ERE+ D
Sbjct: 255 DVP-NEDKFIVEYHFSSYSVKELMPVIVNVFADIPRENPRVKSLASMFPSADYMEREMHD 313
Query: 119 MYGIFFEGHPDL-RRILTDYGFEGHPLRKDFPVTGFVELH 157
+G+ FEG+P + R+ L PLRKDF + V +
Sbjct: 314 FFGVIFEGNPWMGRKFLLAPDAPEFPLRKDFKLEEEVYVR 353
>gi|297569883|ref|YP_003691227.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurivibrio
alkaliphilus AHT2]
gi|296925798|gb|ADH86608.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurivibrio
alkaliphilus AHT2]
Length = 205
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ F+VVY F + R+ ++ V + +P+I IYPGA+W ERE D +G+ F GH
Sbjct: 123 EDSFEVVYDFNHYQELCRVVLRTRVPRSQPQLPTISDIYPGANWHERETHDFFGLVFTGH 182
Query: 128 PDLRRILTDYGFEGHPLRKDF 148
PDL +L + HPLRKD+
Sbjct: 183 PDLSPLLLPEDADFHPLRKDY 203
>gi|122893993|ref|YP_001004189.1| NADH-plastoquinone oxidoreductase subunit J [Ranunculus macranthus]
gi|218527871|sp|A1XGP1|NDHJ_RANMC RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|85540807|gb|ABC70759.1| NADH-plastoquinone oxidoreductase subunit J [Ranunculus macranthus]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524849|gb|ADD31265.1| NADH-plastoquinone oxidoreductase subunit J protein [Meliosma aff.
cuneifolia Moore 333]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ + + LC D V + + +
Sbjct: 28 TLQIKPEDWHSIAVI---SYVYGYNYLRSLCAYDVAPGGLLASVYHLTRIQSGVEQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V I+ AD+ ERE +DM+GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKIFAPRRNPRIPSVFWIWKSADFQERESYDMFGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|164512896|emb|CAP11541.1| NADH deydrogenase subunit J [Araucaria columnaris]
gi|164512898|emb|CAP11542.1| NADH deydrogenase subunit J [Araucaria nemorosa]
Length = 135
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 28 GELSLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR 85
G +L + D +++ S++ + F D+ FL+ + +
Sbjct: 5 GRETLQIKPEDWYSIAVISYVYGYNYLRFQCAYDVAPGGFLASVYHL-TRIQYGVDQPEE 63
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
A +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 64 VCIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 123
Query: 146 KDFPVTGFVELH 157
KD+ F E+
Sbjct: 124 KDYIAPNFYEIQ 135
>gi|156598713|gb|ABU85611.1| NADH-plastoquinone oxidoreductase subunit J [Scaevola aemula]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + F D+ L+ + +
Sbjct: 28 TLQIKPEDWHSIAVILYVYGYNYLRFQCAYDVAPGGLLASVYHL-TRIEYGVDQPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ ++ D+ ERE +DM GI++E HP L+RIL + G PLRKD+
Sbjct: 87 KVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
V F E+
Sbjct: 147 IVPNFYEIQ 155
>gi|139389421|ref|YP_001123118.1| NADH dehydrogenase subunit J [Olimarabidopsis pumila]
gi|218527861|sp|A4QJT6|NDHJ_OLIPU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|134286315|dbj|BAF49942.1| NADH dehydrogenase subunit [Olimarabidopsis pumila]
Length = 158
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVHQAEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|154819507|gb|ABS88038.1| NADH dehydrogenase subunit J [Dendrobium lindleyi]
Length = 128
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L V D +++ ++ F D+ L+ + +
Sbjct: 4 TLQVKPEDWHSIAVILYVYGYNFLRFQCAYDVTPGGLLASVYHL-TRIEYGVDQPEEVCI 62
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 63 KVFASRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 122
>gi|114804268|ref|YP_762264.1| NADH-plastoquinone oxidoreductase subunit J [Morus indica]
gi|122166802|sp|Q09X14|NDHJ_MORIN RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|78100320|gb|ABB20961.1| NADH-plastoquinone oxidoreductase subunit J [Morus indica]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI + HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYNNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|159161163|ref|YP_001542450.1| NADH-plastoquinone oxidoreductase subunit J [Ceratophyllum
demersum]
gi|218527805|sp|A8SEA6|NDHJ_CERDE RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|148508446|gb|ABQ81453.1| NADH-plastoquinone oxidoreductase subunit J [Ceratophyllum
demersum]
gi|227481122|emb|CAP62501.1| NADH dehydrogenase 19kDa subunit [Ceratophyllum demersum]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ G V I+ AD+ ERE +DM+GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRGNPRIPSVFWIWKSADFQERESYDMFGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPDFYEIQ 155
>gi|157954629|gb|ABW05546.1| formate hydrogenlyase subunit F [Thermococcus litoralis DSM 5473]
Length = 546
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 13 VNSFSGSVRFAVNSVGEL--SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
F ++ V + ++ +L V D ++ +++ P+ + + G+D +
Sbjct: 6 EEKFGMTLEKKVIAKNKVLYTLMVRREDFPNIINYILSRPNTR---LFTMVGMDERNTEE 62
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP-GADWFEREVWDMYGIFFEGHPD 129
F V Y FL K N + +++ V E + VG + GA WFEREV D+ G+ EG PD
Sbjct: 63 AFSVTYWFLDWKDNEVIGIRLYVPEDEPYFPSVGAFHKGAIWFEREVQDLLGLKAEGLPD 122
Query: 130 LRRILTDYGFEG--HPLRKDF 148
RR++ + +PLR+DF
Sbjct: 123 PRRLILPDDWPEGVYPLREDF 143
>gi|330850633|ref|YP_004376514.1| NADH-plastoquinone oxidoreductase subunit J [Ptilidium
pulcherrimum]
gi|302024762|gb|ADK89608.1| NADH-plastoquinone oxidoreductase subunit J [Ptilidium
pulcherrimum]
Length = 168
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D SL L F + C D V + + + +
Sbjct: 38 TLQIRSQDWPSLAVSLYI---YGFNYLRSQCAYDLEPGGLLVSVYHLTKIYDNADQPEEV 94
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ V I I+ AD+ ERE DM+GI ++ HP L+RIL + G PLRK
Sbjct: 95 CIKIFVSRKDPVIPSIFWIWKSADFQERESHDMFGIIYKNHPCLKRILMPESWIGWPLRK 154
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 155 DYIVPNFYELQ 165
>gi|313183996|ref|YP_004021153.1| NADH-plastoquinone oxidoreductase subunit J [Castanea mollissima]
gi|290524877|gb|ADD31279.1| NADH-plastoquinone oxidoreductase subunit J protein [Quercus nigra]
gi|309321523|gb|ADO65063.1| NADH-plastoquinone oxidoreductase subunit J [Castanea mollissima]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + GD S+ L + + C D V + +
Sbjct: 28 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIAYGIDQPEEV 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ +PS+ ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRWNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|66876436|gb|AAY57996.1| NdhJ [Jacquemontia tamnifolia]
Length = 180
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 14/138 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD-----------FLSRSNRFDVVYHFL 79
+L + D S+ L + + C D L+R +
Sbjct: 43 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVTKQEYG 99
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + A + +PS+ I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 100 AYQPEEVCIKVFASRKNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMRESW 159
Query: 140 EGHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 160 IGWPLRKDYVAPHFYEIQ 177
>gi|126021015|ref|NP_904199.2| NADH dehydrogenase subunit J [Physcomitrella patens subsp. patens]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + D +S+ L F + C D V + + +
Sbjct: 28 ILQIRSEDWLSIAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIEDNVDQPEEI 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 145 DYIVPDFYELQ 155
>gi|290524845|gb|ADD31263.1| NADH-plastoquinone oxidoreductase subunit J protein [Ilex cornuta]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWPSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIGYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|15643971|ref|NP_229020.1| NADH dehydrogenase, 30 kDa subunit, putative [Thermotoga maritima
MSB8]
gi|4981768|gb|AAD36290.1|AE001778_11 NADH dehydrogenase, 30 kDa subunit, putative [Thermotoga maritima
MSB8]
Length = 177
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 8/174 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + D + F V E+ L V ++++ L+ + ++ +
Sbjct: 3 MTNSMSDALKTL-EVFRPEVEEIDER--EVKLSVAPDRVIAVLETLK---SLGYSHLSLM 56
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+D++ S V F + + ++ I+P A ++ERE+ + +
Sbjct: 57 TCIDWIEDSQFELVYILFSWKDGGKFIVTTRIDRNNPQFVTVKEIWPVARFYEREIHEFF 116
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY--DDKVKKVVYRPVEL 172
G+ F G+ D++ + + + PLRKDF + + + K V+ ++
Sbjct: 117 GVKFSGNEDMKPLFLELWDDKPPLRKDFDPLEYSRRKFPGREYQKDVIDEAKKI 170
>gi|115605025|ref|YP_784476.1| NADH-plastoquinone oxidoreductase subunit J [Piper cenocladum]
gi|122164359|sp|Q06GQ7|NDHJ_PIPCE RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|112253754|gb|ABI14475.1| NADH-plastoquinone oxidoreductase subunit J [Piper cenocladum]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKSEDWYSIAVIL---YAYGYNYLRSQCAYDAAPGGLLASVYHLTRIQYGIDQPEEV 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRTNTRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|238788860|ref|ZP_04632651.1| Formate hydrogenlyase subunit 5 [Yersinia frederiksenii ATCC 33641]
gi|238723165|gb|EEQ14814.1| Formate hydrogenlyase subunit 5 [Yersinia frederiksenii ATCC 33641]
Length = 596
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + L + L G D
Sbjct: 26 YVARLREQFPAAILDEEWQTDNQLTITIKLNSLPDVVEHLYYQQG---GWLSVLFGNDER 82
Query: 67 SRSNRFDVVYHF-------------LSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWF 112
S + F + Y + VK ++ + PS+ P A W
Sbjct: 83 SLNGYFAIYYVLSMEGREQYGIDTGKHYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 142
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 143 EREVRDMYGLQPVGLPDERRLVLPDDWPDDLYPLRKD 179
>gi|91214130|ref|YP_538752.1| NADH dehydrogenase subunit J [Glycine max]
gi|88984610|sp|P31174|NDHJ_SOYBN RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|83595731|gb|ABC25112.1| NADH-plastoquinone oxidoreductase subunit J [Glycine max]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRLEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI VA I ++ AD+ E+E +DM GI ++ HP LRRIL + G PLRK
Sbjct: 85 CIKIFVARKNPRIPSIFWVWKSADFQEKESYDMLGISYDNHPRLRRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|5139343|emb|CAB45648.1| NDH-J protein [Anabaena variabilis]
Length = 175
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSP 81
+ G + VD L+ + + L F + +D + V + +
Sbjct: 39 DKNGVEIIKVDPDFLLPIATAL---YAYGFNYLQFQRRIDLRPGQDLVSVYHLVKVSDNA 95
Query: 82 KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+RVK+ + V + I ADW ER +DM GI +EGHP+L+RIL +
Sbjct: 96 DKPEEIRVKVFLPRENPVVPSVYWIGKTADWQERGSYDMVGIIYEGHPNLKRILIPEDWV 155
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F EL
Sbjct: 156 GWPLRKDYISPDFYELQ 172
>gi|255322775|ref|ZP_05363917.1| hydrogenase-4 component G [Campylobacter showae RM3277]
gi|255300117|gb|EET79392.1| hydrogenase-4 component G [Campylobacter showae RM3277]
Length = 578
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 28/172 (16%)
Query: 9 GDYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
GD V V+ + ++++ VD DL L D + + D
Sbjct: 3 GDKFVEILKTKVKVLEVTRQADDQITVLVDRNDLPLAVKTLYYDIG---GFLSTMIPNDE 59
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--------------PSIVGIYPGADW 111
+ + F + Y S + ++ AE K PS+ + P W
Sbjct: 60 RAINGCFALYYAI-SMEGSKMTEADDFAAEDKCFITVKTLIPGVDPTFPSVTPLVPACVW 118
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVELHYDDK 161
+ERE +DM+G+ EG PD RR++ + HPLRKD ++ Y
Sbjct: 119 YEREAFDMFGLVAEGLPDKRRLVLADDWPDGLHPLRKD-----AMDYRYRPD 165
>gi|238761069|ref|ZP_04622046.1| Formate hydrogenlyase subunit 5 [Yersinia kristensenii ATCC 33638]
gi|238761322|ref|ZP_04622298.1| Formate hydrogenlyase subunit 5 [Yersinia kristensenii ATCC 33638]
gi|238700296|gb|EEP93037.1| Formate hydrogenlyase subunit 5 [Yersinia kristensenii ATCC 33638]
gi|238700549|gb|EEP93289.1| Formate hydrogenlyase subunit 5 [Yersinia kristensenii ATCC 33638]
Length = 597
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 20/157 (12%)
Query: 8 LGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ F ++ +L++ + L + L + L G D
Sbjct: 27 YVARLREQFPAAILDEEWQTPDQLTITIKLNSLPDVVEHLYYQQG---GWLSVLFGNDER 83
Query: 67 SRSNRFDVVYHFLSPKYNRR--------------LRVKIAVAEGKSVPSIVGIYPGADWF 112
S + F + Y + + + E PS+ P A W
Sbjct: 84 SLNGYFAIYYVLSMEGREQYGIDTGKKYGDKCWVIVKALISPERPEFPSVTPRVPAAVWG 143
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 144 EREVRDMYGLQPVGLPDERRLVLPDDWPDDLYPLRKD 180
>gi|167391808|ref|YP_001671686.1| NADH dehydrogenase subunit J [Carica papaya]
gi|218527804|sp|B1A938|NDHJ_CARPA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|166344135|gb|ABY86785.1| NADH-plastoquinone oxidoreductase subunit J [Carica papaya]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524857|gb|ADD31269.1| NADH-plastoquinone oxidoreductase subunit J protein [Berberidopsis
corallina]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|91983995|ref|YP_567079.1| NADH dehydrogenase subunit J [Vitis vinifera]
gi|122230340|sp|Q0ZJ17|NDHJ_VITVI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|91701653|gb|ABE47537.1| NADH-plastoquinone oxidoreductase subunit J [Vitis vinifera]
gi|147768599|emb|CAN73814.1| hypothetical protein VITISV_029212 [Vitis vinifera]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524839|gb|ADD31260.1| NADH-plastoquinone oxidoreductase subunit J protein [Aucuba
japonica]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|269140238|ref|YP_003296939.1| hydrogenase 3 large subunit [Edwardsiella tarda EIB202]
gi|267985899|gb|ACY85728.1| hydrogenase 3 large subunit [Edwardsiella tarda EIB202]
gi|304560068|gb|ADM42732.1| Formate hydrogenlyase subunit 5 [Edwardsiella tarda FL6-60]
Length = 566
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVG-ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + F ++ + +L V L + +L + L G D
Sbjct: 7 QHYIAALRQQFPHAIIEESWQTDTQATLTVKTDMLPEVVEYLYYQQG---GWLSVLFGND 63
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ V Y S + + + + + PS+ P A W EREV DMYG
Sbjct: 64 ERPLCGSYAVYYVL-SMERGTKCWITVKALVDAATREYPSVTPRVPAAVWGEREVRDMYG 122
Query: 122 IFFEGHPDLRRILTDYGFEG--HPLRKD 147
+ G PD RR++ + +PLRKD
Sbjct: 123 LIAVGLPDERRLVLPDDWPDDLYPLRKD 150
>gi|290524853|gb|ADD31267.1| NADH-plastoquinone oxidoreductase subunit J protein [Nerium
oleander]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L V D S+ L + + C D V + +
Sbjct: 28 TLQVKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|217077745|ref|YP_002335463.1| NADH dehydrogenase, 30 kda subunit, putative [Thermosipho africanus
TCF52B]
gi|217037600|gb|ACJ76122.1| NADH dehydrogenase, 30 kda subunit, putative [Thermosipho africanus
TCF52B]
Length = 176
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 12/171 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E L I G E+ +++ ++ S L+ + + ++ L
Sbjct: 5 MNNALEKLKSLI-----GEFELIEIDEREVKINLKPESVLQALSLLKGE---GYFHLSLL 56
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVWDM 119
VD++ +F++VY S ++ V + K+ V ++ERE+ +
Sbjct: 57 SAVDWID-ERKFELVYILYSWNDGGKIIVSTKIDRDKAEFVTVKHMWPVARFYERELHEF 115
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY--DDKVKKVVYR 168
+GI F+G+ D+R + + + PLRKDF + + + + K V++
Sbjct: 116 FGISFKGNDDMRPLFLENWDDLPPLRKDFDPLEYSKRKFPDREYKKDVIHE 166
>gi|306486050|gb|ADM92672.1| NADH-plastoquinone oxidoreductase subunit J [Davidia involucrata]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|124302909|ref|YP_001023704.1| NADH dehydrogenase subunit J [Angiopteris evecta]
gi|218527798|sp|A2T336|NDHJ_ANGEV RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|110628307|gb|ABG79603.1| NADH-plastoquinone oxidoreductase subunit J [Angiopteris evecta]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
L + D S+ L F + C D V + +
Sbjct: 28 ILQIRPQDWPSIAVALYV---YGFNYLRSQCAYDVTPGGGLASVYHLTKVQDDADQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ V I+ +D+ ERE +DM+GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKIFVSREDPRIPSVFWIWKSSDFQERESYDMFGIIYESHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 145 DYIVPNFYELQ 155
>gi|194427378|ref|ZP_03059928.1| hydrogenase-4, G subunit [Escherichia coli B171]
gi|194414699|gb|EDX30971.1| hydrogenase-4, G subunit [Escherichia coli B171]
Length = 555
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 13/155 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRK---DFPVT 151
+ G PD RR++ + HPLRK D+ +
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKGAMDYRLR 161
>gi|197131370|gb|ACH47203.1| NADH-plastoquinone oxidoreductase subunit J [Geranium macrorrhizum]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + + D+ L+ + + +
Sbjct: 28 TLQIKPEDWHSIAVILYVYGLNYLRYQCAYDVAPGGLLAS--VYHLTRVECGVDQPEEVC 85
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 86 IKVFVPRNNPGIPSVFWVWKSADFQERESYDMLGISYDHHPRLKRILMPESWIGWPLRKD 145
Query: 148 FPVTGFVELH 157
+ F E+
Sbjct: 146 YVAPNFYEIQ 155
>gi|123443019|ref|YP_001006994.1| hydrogenase-4 component G [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089980|emb|CAL12837.1| hydrogenase-4 component G [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 601
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 20/153 (13%)
Query: 12 IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ F ++ +L++ + L + L + L G D S +
Sbjct: 35 LREQFPTAILDEEWQTPDQLTITIKLNSLPDVVEHLYYQQG---GWLSVLFGNDERSLNG 91
Query: 71 RFDVVYHFLSPKYNRR--------------LRVKIAVAEGKSVPSIVGIYPGADWFEREV 116
F + Y + + + E PS+ P A W EREV
Sbjct: 92 YFAIYYVLSMEGREQYGIDTGKKYGDKCWVIVKALISPERPEFPSVTPRVPAAVWGEREV 151
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
DMYG+ G PD RR++ + +PLRKD
Sbjct: 152 RDMYGLQPIGLPDERRLVLPDDWPDDLYPLRKD 184
>gi|256709064|gb|ACV20894.1| NADH dehydrogenase subunit J [Schizolobium sp. ACTZ-2009]
Length = 127
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRCQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 59
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFVPRKTPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|161784195|ref|YP_001595511.1| NADH dehydrogenase 19kDa subunit [Lemna minor]
gi|218527848|sp|A9L999|NDHJ_LEMMI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|88696773|gb|ABD48498.1| NADH dehydrogenase 19kDa subunit [Lemna minor]
Length = 158
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + + +
Sbjct: 28 TLQIKPEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLAS--VYHLTRIQYGVDQPEEVC 85
Query: 89 VKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V + V ++ AD+ ERE +DM+GI ++ HP L+RIL + G PLRKD
Sbjct: 86 IKVFVPRENPIVPSVFWVWRSADFQERESYDMFGISYDNHPRLKRILMPESWIGWPLRKD 145
Query: 148 FPVTGFVELH 157
+ F E+
Sbjct: 146 YITPNFYEIQ 155
>gi|290524843|gb|ADD31262.1| NADH-plastoquinone oxidoreductase subunit J protein [Ehretia
acuminata]
Length = 158
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524837|gb|ADD31259.1| NADH-plastoquinone oxidoreductase subunit J protein [Antirrhinum
majus]
Length = 158
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|154819555|gb|ABS88062.1| NADH dehydrogenase subunit J [Piper nigrum]
Length = 127
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V Y +
Sbjct: 3 TLQIKPEDWYSIAVIL---YAYGYNYLRSQCAYDAAPGGLLASVYYLTRIQYGIDQPEEV 59
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 60 CIKVFVPRTNTRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|328952910|ref|YP_004370244.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfobacca
acetoxidans DSM 11109]
gi|328453234|gb|AEB09063.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfobacca
acetoxidans DSM 11109]
Length = 146
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 54/83 (65%)
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
L FD+VY F S +Y R V ++A+G + PSI IYP ADWFEREV++M+GI F
Sbjct: 60 LDLVESFDLVYFFASYRYLCRTVVHASLAKGVAAPSISHIYPAADWFEREVFEMFGITFT 119
Query: 126 GHPDLRRILTDYGFEGHPLRKDF 148
GHP+L+ ++ + HPL KDF
Sbjct: 120 GHPNLKNLILPEDADFHPLLKDF 142
>gi|154819489|gb|ABS88029.1| NADH dehydrogenase subunit J [Asclepias incarnata]
gi|154819491|gb|ABS88030.1| NADH dehydrogenase subunit J [Asclepias tuberosa]
Length = 127
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L V D +++ ++ F D+ L+ + +
Sbjct: 3 TLQVKPEDWHSIAVILYVYGYNFLRFQCAYDVTPGGLLASVYHL-TRIEYGVDQPEEVCI 61
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 62 KVFASRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 121
>gi|117618926|ref|YP_857016.1| hydrogenase-4 component G [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560333|gb|ABK37281.1| hydrogenase-4 component G [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 572
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 10/147 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
D + ++ + ++ V LV S + + D
Sbjct: 12 DYIQQVRAQLPHAIVDEEWQTADQATITVKPTSLVETASLIFHQLG---GWLPLSFANDE 68
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGI 122
S + F V + F S + + + + + V + PSI P A W ERE+ DMYG+
Sbjct: 69 RSLNGHFAVYHVF-SMEGDTKCWITVKVLVDADTQEYPSITPTIPAAVWGEREIRDMYGL 127
Query: 123 FFEGHPDLRRILTDYGFEG--HPLRKD 147
G PD RR++ + HPLRKD
Sbjct: 128 RAIGLPDERRLVLPDDWPEDIHPLRKD 154
>gi|42795490|gb|AAS46057.1| NADH dehydrogenase subunit J [Oryza sativa Indica Group]
gi|42795557|gb|AAS46123.1| NADH dehydrogenase subunit J [Oryza sativa Japonica Group]
gi|42795621|gb|AAS46186.1| NADH dehydrogenase subunit J [Oryza sativa Japonica Group]
gi|290790576|gb|ADD62836.1| NADH-plastoquinone oxidoreductase subunit J [Oryza sativa Japonica
Group]
gi|290790645|gb|ADD62904.1| NADH-plastoquinone oxidoreductase subunit J [Oryza meridionalis]
gi|290790714|gb|ADD62972.1| NADH-plastoquinone oxidoreductase subunit J [Oryza australiensis]
Length = 188
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + D S+ L + + C D + V +
Sbjct: 52 DHRGIETLQIKAEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 108
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ +D+ ERE +DM GI ++ HP L+RIL +
Sbjct: 109 DNPEEVCIKVFAQKDNPRIPSVFWIWRSSDFQERESFDMVGISYDNHPRLKRILMPESWI 168
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 169 GWPLRKDYITPNFYEIQ 185
>gi|325288318|ref|YP_004264499.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Syntrophobotulus
glycolicus DSM 8271]
gi|324963719|gb|ADY54498.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Syntrophobotulus
glycolicus DSM 8271]
Length = 529
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 1 MV--RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M+ +++++ ++ ++ V E+ L+V D++ L L +I
Sbjct: 1 MMTDERMKEIRAFL-GEWAERVEVGQCYTDEIHLNVSKEDIIILSGVLHKKMGY---ILI 56
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
+ D ++ F + Y F + + +K+ + E + PS+ I P A+W+ERE+
Sbjct: 57 QMACNDERELNDCFSLFYTFKDIRNKLIIVLKVLIRETEPEFPSLTPILPAANWYEREIR 116
Query: 118 DMYGIFFEGHPDLRRILTDYGFE--GHPLRKDFPVT 151
DM+G+ +GHPD R + + + LR+DF +
Sbjct: 117 DMFGLDPKGHPDKRHLAVHKTWPAKHYALRRDFNLK 152
>gi|197359654|gb|ACH69869.1| NADH-plastoquinone oxidoreductase subunit J [Aneura sp. Shaw 702]
Length = 158
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP----KYNRR 86
+L V D + L F + C D + +YH
Sbjct: 28 TLQVKSQDWPYIAVSLYV---YGFNYLRSQCAYD-PEPGSLLASIYHLTEICDDADQPEE 83
Query: 87 LRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ +KI V+ + I I+ GAD+ ERE +DM+GI + HP LRRIL + G PLR
Sbjct: 84 ICIKIFVSRKDPIIPSIFWIWKGADFQERESYDMFGIIYGSHPHLRRILMPDSWIGWPLR 143
Query: 146 KDFPVTGFVELH 157
KD+ V F EL
Sbjct: 144 KDYIVPDFYELQ 155
>gi|116617111|ref|YP_817485.1| NADH-plastoquinone oxidoreductase subunit J [Coffea arabica]
gi|122153624|sp|A0A338|NDHJ_COFAR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|116242167|gb|ABJ89682.1| NADH-plastoquinone oxidoreductase subunit J [Coffea arabica]
Length = 158
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKSEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFVSRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYVAPNFYEIQ 155
>gi|108796797|ref|YP_636384.1| NADH dehydrogenase subunit J [Staurastrum punctulatum]
gi|122211809|sp|Q32RZ2|NDHJ_STAPU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|61393565|gb|AAX45706.1| 30 kDa subunit of NADH-plastoquinone oxidoreductase [Staurastrum
punctulatum]
Length = 169
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK---YNRRL 87
++V D S+ L F + CG D + Y +
Sbjct: 39 IVEVRPEDWPSVAVSLYV---YGFNYLRLQCGYDVFPGGPLASIYYLTKVQDGADQPEEV 95
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ +PS I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 96 CIKIFVSRDNPKIPSAFWIWKSADFQERESYDMLGIIYESHPHLKRILMPESWLGWPLRK 155
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 156 DYITPDFFELQ 166
>gi|325496482|gb|EGC94341.1| hydrogenase 4, subunit [Escherichia fergusonii ECD227]
Length = 571
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 12 IVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ F G+V + ++++ V L + +L + L G D + +
Sbjct: 17 LKIQFPGAVLDEERQTSEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGNDERTLNG 73
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ V Y S + + + + + PS+ P A W ERE+ DMYG+ G
Sbjct: 74 HYAVYYAL-SMEGVEKCWIVVKALVDAESREFPSVTPHVPAAVWGEREIRDMYGLIPVGL 132
Query: 128 PDLRRILTDYGFE--GHPLRKD 147
PD RR++ + HPLRKD
Sbjct: 133 PDQRRLVLPDDWPEDMHPLRKD 154
>gi|281424344|ref|ZP_06255257.1| NADH dehydrogenase I, B/C/D subunit [Prevotella oris F0302]
gi|281401613|gb|EFB32444.1| NADH dehydrogenase I, B/C/D subunit [Prevotella oris F0302]
Length = 523
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 7/121 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ D + + L+++ H F ++ + G DF +Y +P+ + R V+
Sbjct: 6 IELQFDDFAAEMAKLKNEKH--FDYLVTIIGEDFGE--EGLGCIYILENPESHERCSVRT 61
Query: 92 ---AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ E +P+ + ++ A+ EREV+D GI F GHPD+RR+ F+G+PLRKDF
Sbjct: 62 IAKQIGEEYVIPTTINLWNAANLLEREVFDFLGIKFLGHPDMRRLFMRNDFKGYPLRKDF 121
Query: 149 P 149
Sbjct: 122 D 122
>gi|254173911|ref|ZP_04880582.1| hydrogenase-4 component G [Thermococcus sp. AM4]
gi|214032160|gb|EEB72991.1| hydrogenase-4 component G [Thermococcus sp. AM4]
Length = 545
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 28 GELSL-DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR 86
+++ +V + + L + C + GVD + RF + + F R
Sbjct: 16 DRVTVAEVSPERVREIAKGL-FNAGCYY---SCGMGVDERPVNMRFAMYHVFNCEAERRH 71
Query: 87 LRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HP 143
+ +K+ + I + GA W ERE DM GI FEGHP+ R++ + +P
Sbjct: 72 VILKLTTPTNELTLPSITPVIEGASWSEREAMDMLGIIFEGHPEPERLILPEDWPEGVYP 131
Query: 144 LRKDFP 149
LRKDFP
Sbjct: 132 LRKDFP 137
>gi|290524861|gb|ADD31271.1| NADH-plastoquinone oxidoreductase subunit J protein [Cornus
florida]
Length = 158
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYISPNFYEIQ 155
>gi|154819541|gb|ABS88055.1| NADH dehydrogenase subunit J [Morella cerifera]
gi|154819543|gb|ABS88056.1| NADH dehydrogenase subunit J [Morella caroliniensis]
Length = 127
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIAYGIDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|307265395|ref|ZP_07546951.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|326390322|ref|ZP_08211881.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|306919509|gb|EFN49727.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|325993599|gb|EGD52032.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermoanaerobacter
ethanolicus JW 200]
Length = 158
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 9 GDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ I+ + V ++S+++ +L++ FLR F ++ + VDF+
Sbjct: 5 KESIIELLNQKGVEVLDLYPNQISVNIKKDNLLNHLVFLR---SIGFDHLSFINAVDFID 61
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
V + + L +P+IV ++ A ++E+E+ + +GI FEG+
Sbjct: 62 EGEFELVYHVWSYTHKIHVLNKVRISRNNPVIPTIVNLWEQAQFYEQEIHEFFGIIFEGN 121
Query: 128 PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
DL + + + PLRKDF F + ++++
Sbjct: 122 KDLSPLFLENWVDIPPLRKDFDTKEFSVRLFGAEIRR 158
>gi|7525036|ref|NP_051062.1| NADH dehydrogenase subunit J [Arabidopsis thaliana]
gi|139388913|ref|YP_001123640.1| NADH dehydrogenase subunit J [Lepidium virginicum]
gi|139389804|ref|YP_001123465.1| NADH dehydrogenase subunit J [Crucihimalaya wallichii]
gi|139390155|ref|YP_001123728.1| NADH dehydrogenase subunit J [Lobularia maritima]
gi|6685680|sp|P56754|NDHJ_ARATH RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527824|sp|A4QKT4|NDHJ_CRUWA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527849|sp|A4QLA9|NDHJ_LEPVR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527850|sp|A4QLJ7|NDHJ_LOBMA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|5881697|dbj|BAA84388.1| NADH dehydrogenase subunit [Arabidopsis thaliana]
gi|78000215|dbj|BAE46910.1| NADH dehydrogenase subunit J [Raphanus sativus]
gi|78000217|dbj|BAE46911.1| NADH dehydrogenase subunit J [Raphanus raphanistrum]
gi|78000219|dbj|BAE46912.1| NADH dehydrogenase subunit J [Raphanus raphanistrum]
gi|78000223|dbj|BAE46914.1| NADH dehydrogenase subunit J [Raphanus landra]
gi|78000259|dbj|BAE46904.1| NADH dehydrogenase subunit J [Brassica rapa]
gi|78000261|dbj|BAE46905.1| NADH dehydrogenase subunit J [Brassica nigra]
gi|78000263|dbj|BAE46906.1| NADH dehydrogenase subunit J [Brassica oleracea]
gi|78000265|dbj|BAE46907.1| NADH dehydrogenase subunit J [Raphanus sativus]
gi|78000267|dbj|BAE46908.1| NADH dehydrogenase subunit J [Raphanus sativus]
gi|78000269|dbj|BAE46909.1| NADH dehydrogenase subunit J [Raphanus sativus]
gi|134286666|dbj|BAF50289.1| NADH dehydrogenase subunit [Crucihimalaya wallichii]
gi|134286843|dbj|BAF50464.1| NADH dehydrogenase subunit [Lepidium virginicum]
gi|134286932|dbj|BAF50552.1| NADH dehydrogenase subunit [Lobularia maritima]
gi|262400773|gb|ACY66262.1| NADH dehydrogenase subunit J [Brassica napus]
Length = 158
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|330829823|ref|YP_004392775.1| formate hydrogenlyase subunit 5 [Aeromonas veronii B565]
gi|328804959|gb|AEB50158.1| Formate hydrogenlyase subunit 5 [Aeromonas veronii B565]
Length = 572
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 10/147 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
D + ++ + ++ V LV S + + D
Sbjct: 12 DYIQQVRAQLPHAIVDEEWQTADQATITVKPTSLVETASLIFHQLG---GWLPLSFANDE 68
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGI 122
S + F V + F S + + + + + V + PSI P A W ERE+ DMYG+
Sbjct: 69 RSLNGHFAVYHVF-SMEGDTKCWITVKVLVDADTQEYPSITPTIPAAVWGEREIRDMYGL 127
Query: 123 FFEGHPDLRRILTDYGFEG--HPLRKD 147
G PD RR++ + HPLRKD
Sbjct: 128 RAIGLPDERRLVLPDDWPEDIHPLRKD 154
>gi|157165393|ref|YP_001466171.1| DNA-3-methyladenine glycosylase I [Campylobacter concisus 13826]
gi|112801569|gb|EAT98913.1| hydrogenase-4 component G [Campylobacter concisus 13826]
Length = 578
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 28/172 (16%)
Query: 9 GDYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
GD V V+ + ++++ VD DL L D I + D
Sbjct: 3 GDKFVEILKTKVKILEVTRQADDQITVLVDRNDLPLAVKTLYYDIG---GFISTMIPNDE 59
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--------------PSIVGIYPGADW 111
+ + + Y S + ++ AE K PS+ + P W
Sbjct: 60 RQINGCYALYYAI-SMEGSKMTEADDFAAEDKCFITVKTLIPGSDPTFPSVTPLVPACVW 118
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVELHYDDK 161
+ERE +DM+G+ EG PD RR++ + HPLRKD ++ Y
Sbjct: 119 YEREAYDMFGLVAEGLPDKRRLVLSDDWPDGLHPLRKD-----AMDYRYRPD 165
>gi|19920169|gb|AAM08601.1|AC092750_35 Hypothetical protein ORF159 from chromosome 10 chloroplast
insertion [Oryza sativa Japonica Group]
gi|21327361|gb|AAM48266.1|AC122148_19 Hypothetical protein ORF159 from chromosome 10 chloroplast
insertion [Oryza sativa Japonica Group]
Length = 159
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + D S+ L + + C D + V +
Sbjct: 23 DHRGIGTLQIKAEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ +D+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFAQKDNPRIPSVFWIWRSSDFQERESFDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|289066815|ref|YP_003434333.1| NADH-plastoquinone oxidoreductase subunit J [Vigna radiata]
gi|259020002|gb|ACV90200.1| NADH-plastoquinone oxidoreductase subunit J [Vigna radiata]
Length = 158
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHFTRIEYGINQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ I ++ AD+ E+E +DM GI ++ HP LRRIL + G PLRK
Sbjct: 85 CIKIFVSRKNPRIPSIFWVWKSADFQEKESYDMLGISYDSHPRLRRILMPENWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|218548079|ref|YP_002381870.1| hydrogenase 4 subunit [Escherichia fergusonii ATCC 35469]
gi|218355620|emb|CAQ88231.1| hydrogenase 4, subunit [Escherichia fergusonii ATCC 35469]
Length = 571
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 12 IVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ F G+V + ++++ V L + +L + L G D + +
Sbjct: 17 LKIQFPGAVLDEERQTSEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGNDERTLNG 73
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ V Y S + + + + + PS+ P A W ERE+ DMYG+ G
Sbjct: 74 HYAVYYAL-SMEGTEKCWIVVKALVDAESREFPSVTPRVPAAVWGEREIRDMYGLIPVGL 132
Query: 128 PDLRRILTDYGFE--GHPLRKD 147
PD RR++ + HPLRKD
Sbjct: 133 PDQRRLVLPDDWPEDMHPLRKD 154
>gi|256826555|ref|YP_003150514.1| Ni,Fe-hydrogenase III large subunit [Cryptobacterium curtum DSM
15641]
gi|256582698|gb|ACU93832.1| Ni,Fe-hydrogenase III large subunit [Cryptobacterium curtum DSM
15641]
Length = 576
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 6/143 (4%)
Query: 9 GDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+ + N F G VR ++++ V L + +L ++ +
Sbjct: 15 AEAVRNRFPGVVRDVSWQDEDQMTITVAIDSLPDVVEYLYFGRGGFLPMMVGN--DERPL 72
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
N + + V++ V PS+ P W EREV DMYG+ G
Sbjct: 73 TGNYALYYILSMEEEDPCWCTVRVEVPADTCEFPSVTPRVPACVWSEREVRDMYGLTPVG 132
Query: 127 HPDLRRILTDYGFEG--HPLRKD 147
PD RR++ + +PLRKD
Sbjct: 133 LPDERRLVLPDDWPDDLYPLRKD 155
>gi|188996638|ref|YP_001930889.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931705|gb|ACD66335.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 524
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E+L I + + + N+ E+ + +L + +L D C ++ D
Sbjct: 3 EELLKPIKDLITDY---SFNTENEIVIHTSDFNLAKVSQYLFRDLDCELATVVATDDDDR 59
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
S F + Y + K N V+ V E S+ I P +W+ERE+ DM+G+
Sbjct: 60 FSDDRCFTIRYVYSYHKKNVFFIVENKVKE--RFNSLANIIPALNWYEREIRDMFGLVPL 117
Query: 126 GHPDLRR-ILTDYGFEG--HPLRKDFPVTGFVE 155
HPD R +L F HPLRKDF + E
Sbjct: 118 NHPDPRPLVLFPENFPSDLHPLRKDFDIKTRPE 150
>gi|139387255|ref|YP_001123376.1| NADH dehydrogenase subunit J [Capsella bursa-pastoris]
gi|218527803|sp|A4QKJ5|NDHJ_CAPBU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|134286576|dbj|BAF50200.1| NADH dehydrogenase subunit [Capsella bursa-pastoris]
Length = 158
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNPAEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|290524865|gb|ADD31273.1| NADH-plastoquinone oxidoreductase subunit J protein [Ficus sp.
Moore 315]
Length = 158
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKSEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F E+
Sbjct: 145 DYIVPNFYEIQ 155
>gi|197131368|gb|ACH47202.1| NADH-plastoquinone oxidoreductase subunit J [Geranium carolinianum]
Length = 158
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + C D + V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGLNYLRSQCAYDVVPGGLLASVYHLTRVECGVDQPEEV 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PS+ ++ AD+ ERE +DM GI ++ HP ++RIL + G PLRK
Sbjct: 85 CIKVFVPRNNPGIPSVFWVWKSADFQERESYDMLGISYDHHPRMKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYVAPNFYEIQ 155
>gi|282881433|ref|ZP_06290107.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
timonensis CRIS 5C-B1]
gi|281304659|gb|EFA96745.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
timonensis CRIS 5C-B1]
Length = 523
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSPKYNRRLRVK 90
+++ +L S L++D H F ++ + G DF ++ + + + +
Sbjct: 6 IEIAFSNLAQEMSKLKNDKH--FDYLVTIVGEDFGEEGLGCIYILENTQTHERTSVKAIA 63
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
+ E + ++ ++ AD EREV+D GI F GH D+RR+ F+G+PLRK+F V
Sbjct: 64 QQIGEEYVLDTVSNLWKAADILEREVYDFLGIKFLGHKDMRRLYLRNDFKGYPLRKNFDV 123
Query: 151 T 151
+
Sbjct: 124 S 124
>gi|282877799|ref|ZP_06286612.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
buccalis ATCC 35310]
gi|281300115|gb|EFA92471.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
buccalis ATCC 35310]
Length = 523
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSPKYNRRLRVK 90
+++ +L S L++D H F ++ + G DF ++ + + + +
Sbjct: 6 IEIAFSNLAQEMSKLKNDKH--FDYLVTIVGEDFGEEGLGCIYILENTQTHERTSVKAIA 63
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
+ E + ++ ++ AD EREV+D GI F GH D+RR+ F+G+PLRK+F V
Sbjct: 64 QQIGEEYVLDTVSNLWKAADILEREVYDFLGIKFLGHKDMRRLYLRNDFKGYPLRKNFDV 123
Query: 151 T 151
+
Sbjct: 124 S 124
>gi|170295873|gb|ACB13193.1| NADH dehydrogenase subunit J [Bistorta officinalis]
Length = 130
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK----YNRR 86
+L + D S+ L + + C D VYH +
Sbjct: 6 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDV-EPGGLLASVYHLTRIESGVDQPEE 61
Query: 87 LRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ +K+ G V ++ D+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 62 VCIKVFAPRGNPRIPSVFWVWKSVDFQERESYDMLGILYDNHPRLKRILMPESWIGWPLR 121
Query: 146 KDF 148
KD+
Sbjct: 122 KDY 124
>gi|193237703|dbj|BAG50113.1| NADH dehydrogenase 30 kD subunit [Takakia lepidozioides]
gi|193237721|dbj|BAG50129.1| NADH dehydrogenase 30 kD subunit [Takakia lepidozioides]
Length = 169
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D +S+ L F + C D V + + +
Sbjct: 39 TLQIRSEDWLSVAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKVQDNADQPEEV 95
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V + +PS+ I+ AD+ ERE +DM GI E HP L+RIL + G PLRK
Sbjct: 96 CIKVFVSRQNPEIPSVFWIWKSADFQERESYDMLGISHESHPHLKRILMPASWIGWPLRK 155
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 156 DYIVPNFYELQ 166
>gi|297840983|ref|XP_002888373.1| NADH dehydrogenase subunit J [Arabidopsis lyrata subsp. lyrata]
gi|297334214|gb|EFH64632.1| NADH dehydrogenase subunit J [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTHMSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIE 155
>gi|154819493|gb|ABS88031.1| NADH dehydrogenase subunit J [Cinnamomum camphora]
gi|154819495|gb|ABS88032.1| NADH dehydrogenase subunit J [Cinnamomum verum]
Length = 127
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + F D+ FL+ + + +
Sbjct: 3 TLQIKPEDWYSIAVISYVYGYNYLRFQCAYDVAPGGFLAS--VYHLTRIQYGVDQPEEVC 60
Query: 89 VKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V V I+ AD+ ERE +DM GI +E HP L+RIL + G PLRKD
Sbjct: 61 IKVFVPRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWVGWPLRKD 120
Query: 148 F 148
+
Sbjct: 121 Y 121
>gi|149390357|ref|YP_001294355.1| NADH dehydrogenase subunit J [Dioscorea elephantipes]
gi|218527828|sp|A6MML0|NDHJ_DIOEL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|148668049|gb|ABR01433.1| NADH-plastoquinone oxidoreductase subunit J [Dioscorea
elephantipes]
Length = 158
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 13 VNSFSGSVRFAVNSVGEL--------SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCG 62
+ S + L +L + D +++ S++ + + C
Sbjct: 2 QSRLSDWLVKHELVHRSLGFDYQGIETLQIKTEDWDSIAVISYI-----YGYNYLRSQCA 56
Query: 63 VDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWD 118
D V + + +K+ V+ V I+ AD+ ERE +D
Sbjct: 57 YDVAPGGFLASVYHLTRIQYGIDKVEEVCLKVFVSRNNPRIPSVFWIWKSADFQERESYD 116
Query: 119 MYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
M GI + HP L+RIL + G PLRKD+ F E+
Sbjct: 117 MLGISYANHPHLKRILMPESWIGWPLRKDYITPNFYEIQ 155
>gi|324112978|gb|EGC06954.1| respiratory-chain NADH dehydrogenase [Escherichia fergusonii B253]
Length = 571
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 12 IVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ F G+V + ++++ V L + +L + L G D + +
Sbjct: 17 LKIQFPGAVLDEERQTSEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGNDERTLNG 73
Query: 71 RFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ V Y S + + + + + PS+ P A W ERE+ DMYG+ G
Sbjct: 74 HYAVYYAL-SMEGTEKCWIVVKALVDAESREFPSVTPRVPAAVWGEREIRDMYGLIPVGL 132
Query: 128 PDLRRILTDYGFE--GHPLRKD 147
PD RR++ + HPLRKD
Sbjct: 133 PDQRRLVLPDDWPEDMHPLRKD 154
>gi|139390351|ref|YP_001122949.1| NADH dehydrogenase subunit [Aethionema cordifolium]
gi|218527795|sp|A4QJB8|NDHJ_AETCO RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|134286144|dbj|BAF49773.1| NADH dehydrogenase subunit [Aethionema cordifolium]
Length = 158
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTHRSNSRIPSVFWVWKSADFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|154819497|gb|ABS88033.1| NADH dehydrogenase subunit J [Citrus aurantium]
gi|154819499|gb|ABS88034.1| NADH dehydrogenase subunit J [Citrus reticulata]
Length = 127
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSVAVILYI---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 59
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ +PS+ ++ A++ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRSNPKIPSVFWVWKSANFPERESYDMLGILYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|300903497|ref|ZP_07121422.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
84-1]
gi|300922193|ref|ZP_07138329.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
182-1]
gi|301302839|ref|ZP_07208967.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
124-1]
gi|300404529|gb|EFJ88067.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
84-1]
gi|300421432|gb|EFK04743.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
182-1]
gi|300841774|gb|EFK69534.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
124-1]
gi|315256503|gb|EFU36471.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
85-1]
Length = 555
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+ + + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAELDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|197359658|gb|ACH69872.1| NADH-plastoquinone oxidoreductase subunit J [Aneura sp. Wickett
473]
Length = 158
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L V D + L F + C D S + + + +
Sbjct: 28 TLQVKSQDWPYIAVSLYV---YGFNYLRSQCAYDLEPGSLLASIYHLTKIYDDADQPEEI 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ + I I+ G+D+ ERE +DM+GI +E HP LRRIL + G PLRK
Sbjct: 85 CIKIFVSRKDPIIPSIFWIWKGSDFQERESYDMFGIVYERHPHLRRILMPDSWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 145 DYIVPDFYELQ 155
>gi|118430305|ref|YP_874739.1| NADH-plastoquinone oxidoreductase subunit J [Agrostis stolonifera]
gi|218527797|sp|A1EA11|NDHJ_AGRST RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|118201214|gb|ABK79583.1| NADH-plastoquinone oxidoreductase subunit J [Agrostis stolonifera]
Length = 159
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ V + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFVQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|212710433|ref|ZP_03318561.1| hypothetical protein PROVALCAL_01495 [Providencia alcalifaciens DSM
30120]
gi|212686853|gb|EEB46381.1| hypothetical protein PROVALCAL_01495 [Providencia alcalifaciens DSM
30120]
Length = 577
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 10 DYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ F ++ ++++ V L + FL C + L G D
Sbjct: 21 AKVREKFPHAMLEEEWQTANQVTITVKTEMLPEVVEFLYY--GCG-GWLPVLWGNDERPL 77
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAV---AEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ +F V Y S + + V + + PS+ P A W ERE+ DMYG+
Sbjct: 78 NGQFAVYYAL-SMEEGEKCWVTVKAYVSPITQEFPSVTPRVPAAVWGEREIRDMYGLRPV 136
Query: 126 GHPDLRRILTDYGFEG--HPLRKD 147
G PD RR++ + +PLRKD
Sbjct: 137 GLPDERRLVLPDDWPEDLYPLRKD 160
>gi|3914184|sp|P92309|NDHJ_LUPLU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|1816650|gb|AAB86904.1| NADH plastiquinone oxidoreductase subunit J [Lupinus luteus]
Length = 158
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + S+ L + + C D V + +
Sbjct: 28 TLQIKPEAWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIECGIDQPEEV 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PSI ++ AD+ ERE +DM GI + HP L+RIL + G PLRK
Sbjct: 85 CIKVFVQGKILGIPSIFWVWKSADFQERESYDMLGISYYNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|139389267|ref|YP_001123033.1| NADH dehydrogenase subunit [Aethionema grandiflorum]
gi|218527796|sp|A4QJK2|NDHJ_AETGR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|134286229|dbj|BAF49857.1| NADH dehydrogenase subunit [Aethionema grandiflorum]
Length = 158
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTHRSNSRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|114107136|ref|YP_740120.1| NADH-plastoquinone oxidoreductase subunit J [Daucus carota]
gi|122227485|sp|Q0G9V9|NDHJ_DAUCA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|113200911|gb|ABI32427.1| NADH-plastoquinone oxidoreductase subunit J [Daucus carota]
Length = 158
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYI---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ G D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFSPRKNPRIPSVFWVWKGVDFQERESFDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|139389645|ref|YP_001123202.1| NADH dehydrogenase subunit [Arabis hirsuta]
gi|218527799|sp|A4QK21|NDHJ_ARAHI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|134286400|dbj|BAF50026.1| NADH dehydrogenase subunit [Arabis hirsuta]
Length = 158
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFMHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|149390543|ref|YP_001294187.1| NADH-plastoquinone oxidoreductase subunit J [Buxus microphylla]
gi|218527802|sp|A6MM39|NDHJ_BUXMI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|146762288|gb|ABQ45252.1| NADH-plastoquinone oxidoreductase subunit J [Buxus microphylla]
Length = 158
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEI 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTPRKNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|303237734|ref|ZP_07324294.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
disiens FB035-09AN]
gi|302482186|gb|EFL45221.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
disiens FB035-09AN]
Length = 524
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 37 GDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI---AV 93
+ LR+ H F ++ + G DF + +Y + + + R VK V
Sbjct: 11 EHFADEMAKLRNKQH--FDYLVTIVGEDF-GKEEGLGCIYILENTETHARCSVKQMAKQV 67
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
+ +PS+ ++ AD EREV+D YGI F GHPD+RR+ F G+PLRKD+ +
Sbjct: 68 GDEYVIPSVFKLWADADLLEREVYDFYGIKFLGHPDMRRLYLRNDFVGYPLRKDYDMDPA 127
Query: 154 VELHYDDKVKKV 165
++ + +V
Sbjct: 128 KNMYTTEDDIEV 139
>gi|164513006|emb|CAP11596.1| NADH dehydrogenase subunit J [Moraea pallida]
Length = 141
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + S +
Sbjct: 11 TLQIKTEDWDSVAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTKIQYSIGKPEEV 67
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ G V I+ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 68 CIKVFAPRGNPRIPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 127
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 128 DYITPNFYEIQ 138
>gi|11466790|ref|NP_039386.1| NADH dehydrogenase subunit J [Oryza sativa Japonica Group]
gi|50233974|ref|YP_052752.1| NADH dehydrogenase subunit J [Oryza nivara]
gi|127711707|ref|YP_654217.2| NADH dehydrogenase subunit J [Oryza sativa Indica Group]
gi|68565737|sp|Q6ENH1|NDHJ_ORYNI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|148887183|sp|P0C338|NDHJ_ORYSA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|148887184|sp|P0C339|NDHJ_ORYSI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|148887185|sp|P0C340|NDHJ_ORYSJ RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|20146756|gb|AAM12492.1|AC074232_19 NADH-plastoquinone oxidoreductase subunit J [Oryza sativa Japonica
Group]
gi|11987|emb|CAA33999.1| unnamed protein product [Oryza sativa Japonica Group]
gi|49614998|dbj|BAD26781.1| NADH dehydrogenase subunit J [Oryza nivara]
gi|56784293|dbj|BAD81975.1| Chloroplast NADH dehydrogenase subunit J [Oryza sativa Japonica
Group]
gi|226608|prf||1603356AE ORF 159
Length = 159
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + D S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ +D+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFAQKDNPRIPSVFWIWRSSDFQERESFDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|222100330|ref|YP_002534898.1| NADH-quinone oxidoreductase [Thermotoga neapolitana DSM 4359]
gi|221572720|gb|ACM23532.1| NADH-quinone oxidoreductase [Thermotoga neapolitana DSM 4359]
Length = 171
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 12/170 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E L F V E + V ++S+ L+ + ++ +
Sbjct: 1 MNEALEKLK-----VFQPEVEEIDER--EAKISVAPDRVISVLETLK---SLGYSHLSLM 50
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD++ S V F + + ++ I+P A ++ERE+ + +
Sbjct: 51 TCVDWIEDSQFELVYILFSWRDGGKFIVSTRIDRNNPVFVTVKEIWPVARFYEREIHEFF 110
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY--DDKVKKVVYR 168
G+ F G+ D++ + + + PLRKDF + + + + K VV
Sbjct: 111 GVEFLGNDDMKPLFLELWDDKPPLRKDFDPLEYSKRKFPGREYKKDVVAE 160
>gi|156596779|gb|ABU85221.1| NADH-plastoquinone oxidoreductase subunit J [Anethum graveolens]
Length = 158
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYI---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFSPRKNPRIPSVFWVWKSVDFQERESFDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|164512924|emb|CAP11555.1| NADH dehydrogenase subunit J [Coffea mauritiana]
gi|164512926|emb|CAP11556.1| NADH dehydrogenase subunit J [Coffea myrtifolia]
Length = 140
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 10 TLQIKSEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 66
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 67 CIKVFVSRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 126
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 127 DYVAPNFYEIQ 137
>gi|290524841|gb|ADD31261.1| NADH-plastoquinone oxidoreductase subunit J protein [Dillenia
indica]
Length = 158
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ + + CG D V + +
Sbjct: 28 TLQIKPEDWHSIAVIFYV---YGYNYLRSQCGYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + G V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTSRGNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|299140924|ref|ZP_07034062.1| NADH dehydrogenase I, B/C/D subunit [Prevotella oris C735]
gi|298577890|gb|EFI49758.1| NADH dehydrogenase I, B/C/D subunit [Prevotella oris C735]
Length = 523
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSPKYNRRLRVK 90
+++ D + + L+++ H F ++ + G DF ++ + S + +
Sbjct: 6 IELQFDDFAAEMAKLKNEKH--FDYLVTIIGEDFGEEGLGCIYILENTESHECCSVRTIA 63
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ E +P+ + ++ A+ EREV+D GI F GHPD+RR+ F+G+PLRKDF
Sbjct: 64 KQIGEEYVIPTTIHLWNAANLLEREVFDFLGIKFLGHPDMRRLFMRNDFKGYPLRKDFD 122
>gi|255961386|ref|YP_003097579.1| NADH-plastoquinone oxidoreductase subunit J [Dendrocalamus
latiflorus]
gi|255040263|gb|ACT99923.1| NADH-plastoquinone oxidoreductase subunit J [Dendrocalamus
latiflorus]
Length = 159
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEICIKVFAQKDNPRIPSVFWIWKSADFQERESYDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|301329009|ref|ZP_07222036.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
78-1]
gi|300844643|gb|EFK72403.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
78-1]
Length = 555
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+ + + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAELDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPLRKD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLRKD 154
>gi|323149085|ref|YP_004222649.1| NADH-plastoquinone oxidoreductase subunit J [Anthriscus cerefolium]
gi|289645578|gb|ADD13641.1| NADH-plastoquinone oxidoreductase subunit J [Anthriscus cerefolium]
Length = 158
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + I C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYI---YGYNYIRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFSPRNNPRIPSVFWVWKSVDFQERESFDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|264684035|emb|CAP46269.1| NADH dehydrogenase [Inga edulis]
gi|264684037|emb|CAP46270.1| NADH dehydrogenase [Inga punctata]
gi|264684039|emb|CAP46271.1| NADH dehydrogenase [Inga chocoensis]
Length = 131
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 13 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 129
Query: 147 DF 148
D+
Sbjct: 130 DY 131
>gi|281190727|ref|YP_003330964.1| NADH dehydrogenase subunit J [Parthenium argentatum]
gi|269924840|gb|ACZ52713.1| NADH dehydrogenase subunit J [Parthenium argentatum]
Length = 158
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 7/134 (5%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYN 84
G +L + GD S+ L + + C D V +
Sbjct: 25 GMETLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQP 81
Query: 85 RRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
+ +K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G P
Sbjct: 82 EEVCIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWP 141
Query: 144 LRKDFPVTGFVELH 157
LRKD+ F E+
Sbjct: 142 LRKDYIAPNFYEIQ 155
>gi|290790851|gb|ADD63107.1| NADH-plastoquinone oxidoreductase subunit J [Microlaena stipoides]
Length = 159
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 80 DNPEEVCIKVFTQKDNPRIPSVFWIWRSADFQERESYDMVGISYENHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|290524859|gb|ADD31270.1| NADH-plastoquinone oxidoreductase subunit J protein [Bulnesia
arborea]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L V D S+ L + + C D V + +
Sbjct: 28 TLQVKSKDWYSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRITYGIDQPEEV 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ +PS+ ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRVDPKIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|115391907|ref|YP_778495.1| NADH dehydrogenase subunit J [Jasminum nudiflorum]
gi|122164968|sp|Q06RC6|NDHJ_JASNU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|110456228|gb|ABG74633.1| NADH dehydrogenase 19 kDa subunit [Jasminum nudiflorum]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPKDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGGDQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|152992440|ref|YP_001358161.1| NADH-quinone oxidoreductase, chain D [Sulfurovum sp. NBC37-1]
gi|151424301|dbj|BAF71804.1| NADH-quinone oxidoreductase, chain D [Sulfurovum sp. NBC37-1]
Length = 547
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA 94
D DLVS+ + L++ + + DF NR ++ Y F + R + +K +
Sbjct: 30 DSDDLVSVANALKEK---GLKTLSTVSPTDFPD-ENRIEMNYFFEDLRSKRNVWLKCNIP 85
Query: 95 EG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH-PLRKDFPV 150
+ S+ +P A+W ERE + M+G+ F GHPDLR I+ F G P R+DF
Sbjct: 86 REVEACRIASLTEAFPAANWHEREAYSMFGVTFVGHPDLRPIIVSEDFVGKTPFRRDFDW 145
Query: 151 TGFVE 155
+
Sbjct: 146 DKHEQ 150
>gi|261345091|ref|ZP_05972735.1| hydrogenase-4 component G [Providencia rustigianii DSM 4541]
gi|282566775|gb|EFB72310.1| hydrogenase-4 component G [Providencia rustigianii DSM 4541]
Length = 577
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 10 DYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ F ++ ++++ V L + FL C + L G D
Sbjct: 21 AKVREKFPHAMLEEEWQTANQVTITVKTDMLPEVVEFLYY--GCG-GWLPVLWGNDERPL 77
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAV---AEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ +F V Y S + + V + + PS+ P A W ERE+ DMYG+
Sbjct: 78 NGQFAVYYAL-SMEEGEKCWVTVKAYVSPITQEFPSVTPRVPAAVWGEREIRDMYGLRPV 136
Query: 126 GHPDLRRILTDYGFEG--HPLRKD 147
G PD RR++ + +PLRKD
Sbjct: 137 GLPDERRLVLPDDWPEDLYPLRKD 160
>gi|283794971|ref|YP_003359362.1| NADH dehydrogenase 19 kDa subunit [Olea europaea]
gi|330850746|ref|YP_004376424.1| NADH dehydrogenase 19 kDa subunit [Olea europaea subsp. europaea]
gi|281428690|gb|ADA69929.1| NADH dehydrogenase 19 kDa subunit [Olea europaea]
gi|291059256|gb|ADD72092.1| NADH-plastoquinone oxidoreductase subunit J [Olea europaea]
gi|328795436|emb|CBR30318.1| NADH dehydrogenase 19 kDa subunit [Olea europaea subsp. europaea]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPKDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|151367618|gb|ABS10577.1| NADH dehydrogenase subunit J [Chamaecrista fasciculata]
Length = 127
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + F D+ L+ + + +
Sbjct: 3 TLQIKPEDWHSIAVILYVYGYNYLRFQCAYDVAPGGLLAS--VYHLTRIEYGIDQPEEVC 60
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 61 IKVFVPRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKD 120
Query: 148 F 148
+
Sbjct: 121 Y 121
>gi|154819553|gb|ABS88061.1| NADH dehydrogenase subunit J [Piper auritum]
Length = 127
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKSEDWYSIAVIL---YAYGYNYLRSQCAYDAAPGGLLASVYHLTRIQYGIDQPEEV 59
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 60 CIKVFVPRTNTRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|110456684|gb|ABG74793.1| NADH dehydrogenase 19 kDa subunit [Jasminum abyssinicum]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPKDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGGDQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A + +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRKNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|78000221|dbj|BAE46913.1| NADH dehydrogenase subunit J [Raphanus raphanistrum]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP ++RIL + G PLRK
Sbjct: 85 CIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRMKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|330541579|gb|AEC32110.1| NADH-plastoquinone oxidoreductase subunit J protein [Camellia
sinensis]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 SIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|257460515|ref|ZP_05625616.1| hydrogenase-4 component G [Campylobacter gracilis RM3268]
gi|257441846|gb|EEV16988.1| hydrogenase-4 component G [Campylobacter gracilis RM3268]
Length = 578
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 28/172 (16%)
Query: 9 GDYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
GD + V+ + ++++ VD DL L D I + D
Sbjct: 3 GDKFIEILKTKVKVLEVTRQAEDQITVLVDRNDLPLAVKTLYYDIG---GFISTMIPNDE 59
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV--------------PSIVGIYPGADW 111
+ F + Y S + + + AE K PS+ + P W
Sbjct: 60 RELNGNFALYYAI-SMEGGKMTEAEDFAAEDKCFITVRTLIPGSDPTFPSVTPLVPACVW 118
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVELHYDDK 161
+ERE +DM+G+ EG PD RR++ + HPLRKD ++ Y
Sbjct: 119 YEREAFDMFGLIAEGLPDKRRLVLSDDWPDGLHPLRKD-----AMDYRYRPD 165
>gi|110456647|gb|ABG74766.1| NADH dehydrogenase 19 kDa subunit [Jasminum leratii]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPKDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGGDQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|94502494|ref|YP_588120.1| NADH dehydrogenase subunit J [Helianthus annuus]
gi|122179575|sp|Q1KXV6|NDHJ_HELAN RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|88656898|gb|ABD47149.1| NADH-plastoquinone oxidoreductase subunit J [Helianthus annuus]
Length = 158
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + GD S+ L + + C D V + +
Sbjct: 28 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRKDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|164512922|emb|CAP11554.1| NADH dehydrogenase subunit J [Carex muricata subsp. muricata]
Length = 124
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + GD S+ L + + C D + V + +
Sbjct: 4 TLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEV 60
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 61 CIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWIGWPLRK 120
Query: 147 DFPV 150
D+ +
Sbjct: 121 DYNL 124
>gi|218696114|ref|YP_002403781.1| hydrogenase 4, subunit [Escherichia coli 55989]
gi|218352846|emb|CAU98645.1| hydrogenase 4, subunit [Escherichia coli 55989]
Length = 555
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Query: 13 VNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
F G+V + ++++ V L + +L + L G D + +
Sbjct: 2 KTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGNDERTLNGH 58
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V Y S + + + + + PS+ P A W ERE+ DMYG+ G P
Sbjct: 59 YAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLP 117
Query: 129 DLRRILTDYGFE--GHPLRKD 147
D RR++ + HPLRKD
Sbjct: 118 DQRRLVLPDDWPEDMHPLRKD 138
>gi|194033152|ref|YP_002000490.1| NADH dehydrogenase subunit J [Brachypodium distachyon]
gi|218527801|sp|B3TN54|NDHJ_BRADI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|193075560|gb|ACF08643.1| NADH dehydrogenase 30kDa subunit [Brachypodium distachyon]
Length = 159
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWV 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|218555013|ref|YP_002387926.1| hydrogenase 4 subunit [Escherichia coli IAI1]
gi|218361781|emb|CAQ99378.1| hydrogenase 4, subunit [Escherichia coli IAI1]
Length = 555
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Query: 13 VNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
F G+V + ++++ V L + +L + L G D + +
Sbjct: 2 KTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGNDERTLNGH 58
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V Y S + + + + + PS+ P A W ERE+ DMYG+ G P
Sbjct: 59 YAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLP 117
Query: 129 DLRRILTDYGFE--GHPLRKD 147
D RR++ + HPLRKD
Sbjct: 118 DQRRLVLPDDWPEDMHPLRKD 138
>gi|126460560|ref|YP_001056838.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pyrobaculum
calidifontis JCM 11548]
gi|126250281|gb|ABO09372.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pyrobaculum
calidifontis JCM 11548]
Length = 177
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 8 LGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L + + G+V V G L + V + + + ++ F +++ L VD++
Sbjct: 17 LLAKVKEALGGAVLSHGVTPEGHLCVMVPAAKIRDVANAVK---SMGFDHVLSLSAVDYV 73
Query: 67 SRSN--RFDVVYHFLSPKYNRRL-RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
V +LSP+ +L V+ + + SI I+P AD+ ERE +M+GI
Sbjct: 74 GEKKFLVMYVFASYLSPELKNQLLHVRAEIPRDDPKIASIADIFPSADYEERECHEMFGI 133
Query: 123 FFEGHPDL-RRILTDYG--------FEGHPLRKDF 148
+FEG+P + +R L D +PLRKDF
Sbjct: 134 WFEGNPHMGKRFLLDPDCCIDEKTGKPLYPLRKDF 168
>gi|218705986|ref|YP_002413505.1| hydrogenase 4, subunit [Escherichia coli UMN026]
gi|218433083|emb|CAR13978.1| hydrogenase 4, subunit [Escherichia coli UMN026]
Length = 555
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Query: 13 VNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
F G+V + ++++ V L + +L + L G D + +
Sbjct: 2 KTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGNDERTLNGH 58
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V Y S + + + + + PS+ P A W ERE+ DMYG+ G P
Sbjct: 59 YAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLP 117
Query: 129 DLRRILTDYGFE--GHPLRKD 147
D RR++ + HPLRKD
Sbjct: 118 DQRRLVLPDDWPEDMHPLRKD 138
>gi|164512982|emb|CAP11584.1| NADH dehydrogenase subunit J [Limonium rigualii]
Length = 135
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 14 TLQIKTEDWHSIAVILYV---YGYNYLRCQCAYDVAPGGLLASVYHLTRIEAGVDQPEEV 70
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 71 CIKVFAPRKNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 130
Query: 147 DF 148
D+
Sbjct: 131 DY 132
>gi|218700945|ref|YP_002408574.1| hydrogenase 4 subunit [Escherichia coli IAI39]
gi|218370931|emb|CAR18750.1| hydrogenase 4, subunit [Escherichia coli IAI39]
Length = 555
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Query: 13 VNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
F G+V + ++++ V L + +L + L G D + +
Sbjct: 2 KTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGNDERTLNGH 58
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ V Y S + + + + + PS+ P A W ERE+ DMYG+ G P
Sbjct: 59 YAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLP 117
Query: 129 DLRRILTDYGFE--GHPLRKD 147
D RR++ + HPLRKD
Sbjct: 118 DQRRLVLPDDWPEDMHPLRKD 138
>gi|212224172|ref|YP_002307408.1| Hydrogenase 4, subunit 5 [Thermococcus onnurineus NA1]
gi|212009129|gb|ACJ16511.1| Hydrogenase 4, subunit 5 [Thermococcus onnurineus NA1]
Length = 540
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 16/160 (10%)
Query: 22 FAVNSVGELSL-DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS 80
+ ++++ +V ++ + L + + + +
Sbjct: 10 KILEHNDKMTVAEVGASNIREIARALFER---GYYYSSGMGVDERPINGRFAMYHIFNCD 66
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ + + VPSI + GA+W ERE DM GI F GHP R++ +
Sbjct: 67 TEGRYVVLKITSPEGSPEVPSITPVIKGAEWSEREAMDMLGIVFSGHPKPERLILPDDWP 126
Query: 141 G--HPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRD 178
+PLRKDFP K +P+E +EH+
Sbjct: 127 EGVYPLRKDFPY----------NKKLPPSKPIEKEREHKK 156
>gi|151367626|gb|ABS10581.1| NADH dehydrogenase subunit J [Malva alcea]
Length = 127
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|110456607|gb|ABG74734.1| NADH dehydrogenase 19 kDa subunit [Forsythia europaea]
Length = 158
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPKDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|313183928|ref|YP_004021782.1| NADH-plastoquinone oxidoreductase subunit J [Equisetum arvense]
gi|281371648|gb|ADA63581.1| NADH-plastoquinone oxidoreductase subunit J [Equisetum arvense]
Length = 174
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 44 VLQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 100
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G PLRK
Sbjct: 101 CLKVFVSRKNPRIPSLFWIWKSSDFQEQESYDMFGILYESHPHLKRILMPESWIGWPLRK 160
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 161 DYIVPNFYELQ 171
>gi|198279753|emb|CAP03375.1| NADH dehydrogenase subunit J [Conostylis angustifolia]
Length = 143
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKPEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|295065731|ref|YP_003587671.1| NADH dehydrogenase subunit J [Anomochloa marantoidea]
gi|251765255|gb|ACT15409.1| NADH dehydrogenase subunit J [Anomochloa marantoidea]
Length = 159
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + + V +
Sbjct: 23 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVVPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFAPKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|198279691|emb|CAP03344.1| NADH dehydrogenase subunit J [Conostylis phathyrantha]
Length = 143
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 13 TLQIKTEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPEEV 69
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFAKRNNPRIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 129
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 130 DYITPNFYEIQ 140
>gi|82544936|ref|YP_408883.1| hydrogenase 4 subunit [Shigella boydii Sb227]
gi|81246347|gb|ABB67055.1| hydrogenase 4 subunit [Shigella boydii Sb227]
gi|320185184|gb|EFW59964.1| Hydrogenase-4 component G [Shigella flexneri CDC 796-83]
gi|332092804|gb|EGI97873.1| hydrogenase-4 component G [Shigella boydii 3594-74]
Length = 571
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 10/148 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + + F G+V + ++++ V L + +L + L G D
Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHD---GWLPVLFGND 67
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYG 121
+ + + V Y S + + + + + PS+ P A W ERE+ DMYG
Sbjct: 68 ERTLNGHYAVYYAL-SMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYG 126
Query: 122 IFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ G PD RR++ + HPL KD
Sbjct: 127 LIPVGLPDQRRLVLPDDWPEDMHPLHKD 154
>gi|11467195|ref|NP_043028.1| NADH dehydrogenase subunit J [Zea mays]
gi|48478774|ref|YP_024382.1| NADH dehydrogenase subunit J [Saccharum hybrid cultivar SP-80-3280]
gi|50812531|ref|YP_054634.1| NADH dehydrogenase subunit J [Saccharum officinarum]
gi|118614495|ref|YP_899410.1| NADH-plastoquinone oxidoreductase subunit J [Sorghum bicolor]
gi|242057525|ref|XP_002457908.1| hypothetical protein SORBIDRAFT_03g020190 [Sorghum bicolor]
gi|260677423|ref|YP_003208191.1| NADH-plastoquinone oxidoreductase subunit J [Coix lacryma-jobi]
gi|128855|sp|P19124|NDHJ_MAIZE RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|75121196|sp|Q6ENW0|NDHJ_SACOF RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|75126312|sp|Q6L396|NDHJ_SACHY RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527872|sp|A1E9S7|NDHJ_SORBI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|12428|emb|CAA35483.1| unnamed protein product [Zea mays]
gi|902225|emb|CAA60289.1| ndhJ [Zea mays]
gi|48478676|gb|AAT44696.1| NADH dehydrogenase subunit J [Saccharum hybrid cultivar SP80-3280]
gi|49659515|dbj|BAD27296.1| NADH dehydrogenase 30kD subunit [Saccharum hybrid cultivar NCo 310]
gi|118201129|gb|ABK79499.1| NADH-plastoquinone oxidoreductase subunit J [Sorghum bicolor]
gi|209361361|gb|ACI43276.1| NADH-plastoquinone oxidoreductase subunit J [Coix lacryma-jobi]
gi|241929883|gb|EES03028.1| hypothetical protein SORBIDRAFT_03g020190 [Sorghum bicolor]
Length = 159
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGVETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V ++ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFAQKDNPRIPSVFWVWRSADFQERESYDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|183217744|ref|YP_001837363.1| NADH dehydrogenase subunit J [Guizotia abyssinica]
gi|218527832|sp|B2LMJ6|NDHJ_GUIAB RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|179366259|gb|ACB86530.1| NADH-plastoquinone oxidoreductase subunit J [Guizotia abyssinica]
Length = 158
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + GD S+ L + + C D V + +
Sbjct: 28 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|156598564|gb|ABU85539.1| NADH-plastoquinone oxidoreductase subunit J [Passiflora biflora]
Length = 158
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNR 85
+L + D +++ +L + + C D V +
Sbjct: 28 TLQIKPEDWDSIAVILYL-----YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYDIDQPE 82
Query: 86 RLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 83 EVCIKVFAPRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPKSWIGWPL 142
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 143 RKDYIAPNFYEIQ 155
>gi|154819521|gb|ABS88045.1| NADH dehydrogenase subunit J [Ilex opaca]
gi|154819523|gb|ABS88046.1| NADH dehydrogenase subunit J [Ilex paraguariensis]
Length = 127
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWPSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIGYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|261879875|ref|ZP_06006302.1| proton-translocating NADH-quinone oxidoreductase [Prevotella
bergensis DSM 17361]
gi|270333468|gb|EFA44254.1| proton-translocating NADH-quinone oxidoreductase [Prevotella
bergensis DSM 17361]
Length = 524
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY--HFLSPKYNRRLRVKIAVAEGKSVP 100
L+++ H F +I + G DF + + S + ++ V +P
Sbjct: 17 MGKLKNEKH--FDYLITIVGEDFGPEEGLGCIYILENTQSHERVSVKQMAKTVDGEYVIP 74
Query: 101 SIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
S++G++ AD EREV+D GI F GHPD+RR+ +EG+PLRKDF ++
Sbjct: 75 SVIGLWHAADLLEREVFDFLGIKFLGHPDMRRLFMRSDYEGYPLRKDFDMS 125
>gi|164513008|emb|CAP11597.1| NADH dehydrogenase subunit J [Moraea simplex]
Length = 141
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + S +
Sbjct: 11 TLQIKTEDWDSVAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTKIQYSIGKPEEV 67
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 68 CIKVFAPRSNPRIPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 127
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 128 DYITPNFYEIQ 138
>gi|68164806|ref|YP_247602.1| NADH dehydrogenase subunit J [Cucumis sativus]
gi|75317262|sp|Q4VZH2|NDHJ_CUCSA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|67511401|emb|CAJ00761.1| NADH dehydrogenase subunit J [Cucumis sativus]
gi|74027104|gb|AAZ94654.1| NADH dehydrogenase 19 kDa subunit [Cucumis sativus]
gi|115432807|gb|ABI97420.1| NADH-plastoquinone oxidoreductase subunit J [Cucumis sativus]
gi|115498307|gb|ABI98749.1| NADH-plastoquinone oxidoreductase subunit J [Cucumis sativus]
Length = 158
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + + S+ L + + C D V + + +
Sbjct: 28 TLQIKPEEWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ AD+ ERE +DM GI+++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAARINPRIPSVFWVWKSADFPERESYDMLGIYYDNHPRLKRILMPESWVGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|176044126|gb|ACB72809.1| NADH dehydrogenase subunit J [Fagopyrum dibotrys]
Length = 130
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V ++ D+ ERE +DM GIF+E HP L+RIL + G PLRK
Sbjct: 63 CIKVFVPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYENHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|154819477|gb|ABS88023.1| NADH dehydrogenase subunit J [Amaranthus hybridus]
Length = 128
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 4 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 60
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A+ +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 61 CIKVFALRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 120
Query: 147 DF 148
D+
Sbjct: 121 DY 122
>gi|139389953|ref|YP_001123553.1| NADH dehydrogenase subunit [Draba nemorosa]
gi|218527829|sp|A4QL22|NDHJ_DRANE RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|134286755|dbj|BAF50377.1| NADH dehydrogenase subunit [Draba nemorosa]
Length = 158
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D ++ L + + C D V + +
Sbjct: 28 TLQIKPEDWHAIAVILYV---YGYNYLRLQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTQRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWMGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|145298796|ref|YP_001141637.1| formate hydrogenlyase subunit 5 precursor [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142851568|gb|ABO89889.1| Formate hydrogenlyase subunit 5 precursor [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 572
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 53/144 (36%), Gaps = 4/144 (2%)
Query: 7 DLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
D + ++ + +L V LV + L ++++
Sbjct: 12 DYIQQLRQQLPHAIIDEQWQTADQATLTVKPTSLV-ALTSLIFHKQGGWLSVSFANDERS 70
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
L+ V+ + + A + PSI P A W ERE+ DMYG+
Sbjct: 71 LNGHFAVYHVFSMEGDTKSWITVKVLVEATSQEYPSITPTIPAAVWGEREIRDMYGLRAV 130
Query: 126 GHPDLRRILTDYGFEG--HPLRKD 147
G PD RR++ + HPLRKD
Sbjct: 131 GLPDERRLVLPDDWPEDIHPLRKD 154
>gi|154819479|gb|ABS88024.1| NADH dehydrogenase subunit J [Amaranthus spinosus]
Length = 128
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 4 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 60
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 61 CIKVFASRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 120
Query: 147 DF 148
D+
Sbjct: 121 DY 122
>gi|14017575|ref|NP_114262.1| NADH dehydrogenase subunit J [Triticum aestivum]
gi|118430391|ref|YP_874656.1| NADH-plastoquinone oxidoreductase subunit J [Hordeum vulgare subsp.
vulgare]
gi|159106867|ref|YP_001531286.1| NADH-plastoquinone oxidoreductase subunit J [Lolium perenne]
gi|20178002|sp|Q95H60|NDHJ_WHEAT RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|75139824|sp|Q7GT16|NDHJ_HORVU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527851|sp|A8Y9H3|NDHJ_LOLPR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|13928208|dbj|BAB47037.1| NADH dehydrogenase 30kDa subunit [Triticum aestivum]
gi|29367119|gb|AAO72307.1| NdhJ [Hordeum vulgare]
gi|118201045|gb|ABK79416.1| NADH-plastoquinone oxidoreductase subunit J [Hordeum vulgare subsp.
vulgare]
gi|158934401|emb|CAO85979.1| NADH-plastoquinone oxidoreductase subunit J [Lolium perenne]
Length = 159
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|307697323|gb|ADN86116.1| NADH-plastoquinone oxidoreductase subunit J [Chasmanthium
latifolium]
Length = 159
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V ++ +D+ ERE +DM GIF++ HP L+RIL +
Sbjct: 80 DNPEEVCIKVFAQKDNPRIPSVFWVWKSSDFQERESYDMVGIFYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|77157871|gb|ABA61912.1| 30 kDa subunit of NADH-plastoquinone oxidoreductase [Chara
vulgaris]
Length = 168
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK---YNRRL 87
+ + + S+ L F + C D V Y + + +
Sbjct: 38 VIQIKPQNWASVAVILYI---YGFNYLRLQCAYDLSPGGMLASVYYLTKLEEKADQPQEI 94
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V + S+ ++ A++ ERE +DM GI +E HP L+RIL + G P+RK
Sbjct: 95 CIKVLVPRLHPKLASVFWVWKTANFQERESYDMLGIIYESHPSLKRILMPESWLGWPMRK 154
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 155 DYITPQFYELQ 165
>gi|139387441|ref|YP_001122795.1| NADH-plastoquinone oxidoreductase subunit J [Phaseolus vulgaris]
gi|218527863|sp|A4GG94|NDHJ_PHAVU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|112030963|gb|ABH88075.1| NADH-plastoquinone oxidoreductase subunit J [Phaseolus vulgaris]
gi|158187160|gb|ABW22793.1| NADH-plastoquinone oxidoreductase subunit J [Phaseolus vulgaris]
Length = 158
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGINQPEEV 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ I ++ AD+ E+E +DM GI ++ HP LRRIL + G PLRK
Sbjct: 85 CIKIFVSRKNPRIPSIFWVWKSADFQEQESYDMLGISYDSHPRLRRILMPENWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|176044371|gb|ACB72816.1| NADH dehydrogenase subunit J [Persicaria tinctoria]
Length = 130
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGMLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFVPRRNPRIPSVFWVWKSVDFQERESYDMLGILYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|154819547|gb|ABS88058.1| NADH dehydrogenase subunit J [Opuntia humifusa]
Length = 127
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVIL---YAYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQAEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ AD+ ERE +DM GI+++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRSNPRITSVFWVWKSADFQERESYDMLGIYYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|139388097|ref|YP_001123289.1| NADH dehydrogenase subunit [Barbarea verna]
gi|139389099|ref|YP_001123817.1| NADH dehydrogenase subunit J [Nasturtium officinale]
gi|218527800|sp|A4QKA8|NDHJ_BARVE RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527854|sp|A4QLT6|NDHJ_NASOF RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|134286488|dbj|BAF50113.1| NADH dehydrogenase subunit [Barbarea verna]
gi|134287022|dbj|BAF50641.1| NADH dehydrogenase subunit [Nasturtium officinale]
Length = 158
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|300727165|ref|ZP_07060583.1| NADH dehydrogenase I, d subunit [Prevotella bryantii B14]
gi|299775551|gb|EFI72143.1| NADH dehydrogenase I, d subunit [Prevotella bryantii B14]
Length = 524
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 37 GDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY--HFLSPKYNRRLRVKIAVA 94
+ S + L+++ H F ++ + G DF + + + + + ++ V
Sbjct: 11 DNFASEMAKLKNEKH--FDYLVTIIGEDFGAEEGLGCIYILENTQTHERTSVKQLAKQVG 68
Query: 95 EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
E +PS++ ++ GAD EREV+D GI F GHPD+RR+ F+G+PLRKDF ++
Sbjct: 69 EEYVIPSVLKLWHGADLLEREVFDFLGIKFLGHPDMRRLFMRNDFQGYPLRKDFDMS 125
>gi|199423494|emb|CAP06336.1| NADH dehydrogenase subunit J [Deiregyne riodelayensis]
gi|199423501|emb|CAP06337.1| NADH dehydrogenase subunit J [Aulosepalum ramentaceum]
gi|199423506|emb|CAP06338.1| NADH dehydrogenase subunit J [Aulosepalum ramentaceum]
gi|199423513|emb|CAP06339.1| NADH dehydrogenase subunit J [Aulosepalum pyramidale]
gi|199423520|emb|CAP06340.1| NADH dehydrogenase subunit J [Aulosepalum pyramidale]
gi|199423544|emb|CAP06343.1| NADH dehydrogenase subunit J [Aulosepalum obtusum]
gi|199423550|emb|CAP06344.1| NADH dehydrogenase subunit J [Aulosepalum nelsonii]
gi|199423556|emb|CAP06345.1| NADH dehydrogenase subunit J [Aulosepalum nelsonii]
gi|199423561|emb|CAP06346.1| NADH dehydrogenase subunit J [Aulosepalum hemichreum]
gi|199423566|emb|CAP06347.1| NADH dehydrogenase subunit J [Aulosepalum hemichreum]
gi|199423572|emb|CAP06348.1| NADH dehydrogenase subunit J [Aulosepalum tenuiflorum]
Length = 143
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V + +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTKIWSGIDKPE 67
Query: 86 RLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PL
Sbjct: 68 EVCIKVFAPRSNPQTPSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|176044227|gb|ACB72812.1| NADH dehydrogenase subunit J [Fallopia japonica]
Length = 130
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFVPRRNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|127707703|ref|YP_635741.2| NADH dehydrogenase subunit J [Chara vulgaris]
Length = 158
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK---YNRRL 87
+ + + S+ L F + C D V Y + + +
Sbjct: 28 VIQIKPQNWASVAVILYI---YGFNYLRLQCAYDLSPGGMLASVYYLTKLEEKADQPQEI 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V + S+ ++ A++ ERE +DM GI +E HP L+RIL + G P+RK
Sbjct: 85 CIKVLVPRLHPKLASVFWVWKTANFQERESYDMLGIIYESHPSLKRILMPESWLGWPMRK 144
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 145 DYITPQFYELQ 155
>gi|164512984|emb|CAP11585.1| NADH dehydrogenase subunit J [Limonium thiniense]
Length = 135
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 14 TLQIKTEDWHSIAVILYV---YGYNYLRCQCAYDVAPGGLLASVYHLTRIEAGVDQPEEV 70
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 71 CIKVFAPRKNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 130
Query: 147 DF 148
D+
Sbjct: 131 DY 132
>gi|81176253|ref|YP_398332.1| NADH dehydrogenase subunit J [Lactuca sativa]
gi|122212030|sp|Q332X5|NDHJ_LACSA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|78675171|dbj|BAE47597.1| NAD(P)H-quinone oxidoreductase chain J [Lactuca sativa]
gi|88656986|gb|ABD47236.1| NADH-plastoquinone oxidoreductase subunit J [Lactuca sativa]
Length = 158
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + GD S+ L + + C D V + + + +
Sbjct: 28 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGADQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|294634801|ref|ZP_06713326.1| hydrogenase-4 component G [Edwardsiella tarda ATCC 23685]
gi|291091792|gb|EFE24353.1| hydrogenase-4 component G [Edwardsiella tarda ATCC 23685]
Length = 566
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 11/154 (7%)
Query: 1 MVRKI-EDLGDYIVNSFSGSVR-FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNII 58
M + I + + F ++ + + + ++ V G L + +L +
Sbjct: 1 MTQHIGQHYIAALRQQFPHAILDESWQTATQATITVKTGMLPEVVEYLYYQQG---GWLS 57
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFERE 115
L G D + V Y S + + + + + PS+ P A W ERE
Sbjct: 58 VLFGNDERPLCGSYAVYYVL-SMEQGTKSWITVKALVDANTREYPSVTPRVPAAVWGERE 116
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
V DMYG+ G PD RR++ + +PLRKD
Sbjct: 117 VRDMYGLIAVGLPDERRLVLPDDWPDDLYPLRKD 150
>gi|198279799|emb|CAP03398.1| NADH dehydrogenase subunit J [Dactylorhiza alpestris]
Length = 143
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 27 VGELSLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYN 84
G L + D +++ S++ + D+ FL+ + K
Sbjct: 9 RGXXILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPE 67
Query: 85 RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
A+ PS+ I+ AD+ ERE +DM GIF++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFALRSNPKTPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|296936674|gb|ADH94346.1| NADH-plastoquinone oxidoreductase subunit J [Syzygium cumini]
Length = 158
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRSNPRIPSVFWIWKSADFQERESYDMLGICYDTHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|154819571|gb|ABS88070.1| NADH dehydrogenase subunit J [Viburnum setigerum]
Length = 129
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 5 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 61
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 62 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 121
Query: 147 DF 148
D+
Sbjct: 122 DY 123
>gi|154819561|gb|ABS88065.1| NADH dehydrogenase subunit J [Prunus virginiana]
gi|154819563|gb|ABS88066.1| NADH dehydrogenase subunit J [Prunus x yedoensis]
Length = 127
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 59
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ I ++ AD+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSIFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|114329971|ref|YP_740653.1| NADH-plastoquinone oxidoreductase subunit J [Nandina domestica]
gi|122165958|sp|Q09FV8|NDHJ_NANDO RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|114054473|gb|ABI49866.1| NADH-plastoquinone oxidoreductase subunit J [Nandina domestica]
gi|290524881|gb|ADD31281.1| NADH-plastoquinone oxidoreductase subunit J protein [Trochodendron
aralioides]
Length = 158
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ L+ + +
Sbjct: 28 TLQIKPEDWHSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TRIQYGVDQPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 87 KVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 IAPNFYEIQ 155
>gi|199423532|emb|CAP06341.1| NADH dehydrogenase subunit J [Aulosepalum oestlundii]
gi|199423539|emb|CAP06342.1| NADH dehydrogenase subunit J [Aulosepalum oestlundii]
Length = 143
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V + +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTKIWSGLDKPE 67
Query: 86 RLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PL
Sbjct: 68 EVCIKVFAPRSNPQTPSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|52220813|ref|YP_086969.1| NADH dehydrogenase subunit J [Panax ginseng]
gi|75117192|sp|Q68S03|NDHJ_PANGI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|51235316|gb|AAT98512.1| NADH dehydrogenase 19 kDa subunit [Panax ginseng]
Length = 158
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GIF+ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYATHPRLKRILMPESWVGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|320352992|ref|YP_004194331.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfobulbus
propionicus DSM 2032]
gi|320121494|gb|ADW17040.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfobulbus
propionicus DSM 2032]
Length = 168
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRL 87
L + +V++ + + + GVD++ R + + + R+
Sbjct: 49 HHLDVLCKPDQVVAVARVM----DSEGYFLESISGVDWIDRQQLEILYDYNRLGGAHCRV 104
Query: 88 RVKIAVAEGKSVPSIVG-IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
V+ V V + I+P ADW ERE +D YG+ F+ HP+L RIL + HPL K
Sbjct: 105 MVRTLVPRSGPVVPTISAIFPSADWHERETYDFYGVHFQDHPNLIRILLPEDADFHPLLK 164
Query: 147 DF 148
DF
Sbjct: 165 DF 166
>gi|115604937|ref|YP_784389.1| NADH-plastoquinone oxidoreductase subunit J [Drimys granadensis]
gi|122164438|sp|Q06GZ4|NDHJ_DRIGR RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|112032665|gb|ABH88300.1| NADH-plastoquinone oxidoreductase subunit J [Drimys granadensis]
Length = 158
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|108802646|ref|YP_636302.1| NADH dehydrogenase subunit J [Eucalyptus globulus subsp. globulus]
gi|309322452|ref|YP_003933965.1| NADH-plastoquinone oxidoreductase subunit J [Eucalyptus grandis]
gi|122219182|sp|Q49KZ5|NDHJ_EUCGG RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|60460812|gb|AAX21032.1| NADH-plastoquinone oxidoreductase subunit J [Eucalyptus globulus
subsp. globulus]
gi|308223286|gb|ADO23594.1| NADH-plastoquinone oxidoreductase subunit J [Eucalyptus grandis]
Length = 158
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGICYDTHPRLKRILMPETWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|164512942|emb|CAP11564.1| NADH dehydrogenase subunit J [Dioscorea schimperiana]
Length = 141
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 11 TLQIKTEDWDSIAVISYI-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKME 65
Query: 86 RLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ V+ V I+ AD+ ERE +DM GI + HP L+RIL + G PL
Sbjct: 66 EVCLKVFVSRNNPRIPSVFWIWKSADFQERESYDMLGISYANHPHLKRILMPESWIGWPL 125
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 126 RKDYITPNFYEIQ 138
>gi|164512940|emb|CAP11563.1| NADH dehydrogenase subunit J [Dioscorea bulbifera]
Length = 141
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 11 TLQIKTEDWDSIAVISYI-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKVE 65
Query: 86 RLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ V+ V I+ AD+ ERE +DM GI + HP L+RIL + G PL
Sbjct: 66 EVCLKVFVSRNNPRIPSVFWIWKSADFQERESYDMLGISYANHPHLKRILMPESWIGWPL 125
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 126 RKDYITPNFYEIQ 138
>gi|308746032|ref|YP_003934561.1| NADH-plastoquinone oxidoreductase subunit J [Cheilanthes
lindheimeri]
gi|302375465|gb|ADL29839.1| NADH-plastoquinone oxidoreductase subunit J [Cheilanthes
lindheimeri]
Length = 170
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
L V + +S+ F + C D + V + +
Sbjct: 40 ILQVKSEEWLSIAVA---PYAYGFNYLRSQCAYDATPGGSLVSVYHLTQMQDHSDQPEEI 96
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
K+ V + +PS+ ++ AD+ ERE +DM GI +GHP L+RIL + G PLRK
Sbjct: 97 CAKVFVSRKNPQIPSVYWVWKSADFQERESYDMLGIIHQGHPYLKRILMPESWIGWPLRK 156
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 157 DYVVPNFYELQ 167
>gi|170784757|ref|YP_001718673.1| NADH-plastoquinone oxidoreductase subunit J [Trachelium caeruleum]
gi|218527875|sp|A9QC92|NDHJ_TRACE RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|156598865|gb|ABU85685.1| NADH-plastoquinone oxidoreductase subunit J [Trachelium caeruleum]
gi|157267505|gb|ABV26498.1| NADH-plastoquinone oxidoreductase subunit J [Trachelium caeruleum]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ + D S+ L + + C D V + +
Sbjct: 28 TFQIKSEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIKYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIVGI-YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V + D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFATRRDPRIPSVFCVWKSVDFQERESYDMLGISYDNHPRLKRILMPDSWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|154819559|gb|ABS88064.1| NADH dehydrogenase subunit J [Plantago ovata]
Length = 127
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDLAPGGLLASVYHLTRIESGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKIFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|89280638|ref|YP_514855.1| NADH dehydrogenase subunit J [Solanum lycopersicum]
gi|122201784|sp|Q2MI97|NDHJ_SOLLC RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|84371986|gb|ABC56303.1| NADH-plastoquinone oxidoreductase subunit J [Solanum lycopersicum]
gi|89241674|emb|CAJ32396.1| NADH dehydrogenase subunit J [Solanum lycopersicum]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ + + C D V + L
Sbjct: 28 TLQIKPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVAQPEEL 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|229577757|ref|YP_002836093.1| NADH-plastoquinone oxidoreductase subunit J [Megaleranthis
saniculifolia]
gi|226933885|gb|ACO92018.1| NADH-plastoquinone oxidoreductase subunit J [Megaleranthis
saniculifolia]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ L+ + +
Sbjct: 28 TLQIKPEDWHSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TRIQYGVDQPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 87 KVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 IAPNFYEIQ 155
>gi|149390271|ref|YP_001294101.1| NADH-plastoquinone oxidoreductase subunit J [Chloranthus spicatus]
gi|218527822|sp|A6MMC5|NDHJ_CHLSC RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|146744191|gb|ABQ43263.1| NADH-plastoquinone oxidoreductase subunit J [Chloranthus spicatus]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDIAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|154819569|gb|ABS88069.1| NADH dehydrogenase subunit J [Viburnum cotinifolium]
Length = 127
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|169835446|gb|ACA96874.1| NADH dehydrogenase subunit J [Blumea mollis]
Length = 146
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + GD S+ L + + C D V + +
Sbjct: 16 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 72
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 73 CIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 132
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 133 DYIAPNFYEIQ 143
>gi|121720616|ref|YP_001001537.1| NADH-plastoquinone oxidoreductase subunit J [Nuphar advena]
gi|218527856|sp|A1XFV8|NDHJ_NUPAD RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|84682207|gb|ABC60461.1| NADH-plastoquinone oxidoreductase subunit J [Nuphar advena]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V I+ AD+ ERE +DM GI ++ HP ++RIL + G PLRK
Sbjct: 85 CIKVFVPRSNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRMKRILMPESWVGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 145 DYIAPNFYELQ 155
>gi|114107049|ref|YP_740205.1| NADH-plastoquinone oxidoreductase subunit J [Liriodendron
tulipifera]
gi|122221292|sp|Q0G9L6|NDHJ_LIRTU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|113200997|gb|ABI32512.1| NADH-plastoquinone oxidoreductase subunit J [Liriodendron
tulipifera]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTKIEYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|50346785|ref|YP_053158.1| NADH dehydrogenase subunit J [Nymphaea alba]
gi|75275859|sp|Q6EW45|NDHJ_NYMAL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|50250330|emb|CAF28596.1| NADH dehydrogenase 19kDa subunit [Nymphaea alba]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V I+ AD+ ERE +DM GI ++ HP ++RIL + G PLRK
Sbjct: 85 CIKVFVPRSNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRMKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F EL
Sbjct: 145 DYIAPNFYELQ 155
>gi|91208991|ref|YP_538851.1| NADH dehydrogenase subunit J [Solanum bulbocastanum]
gi|122201826|sp|Q2MII4|NDHJ_SOLBU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|84371898|gb|ABC56216.1| NADH-plastoquinone oxidoreductase subunit J [Solanum bulbocastanum]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ + + C D V + L
Sbjct: 28 TLQIKPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEL 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|170295871|gb|ACB13192.1| NADH dehydrogenase subunit J [Polygonum aviculare]
Length = 130
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIVYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|170295869|gb|ACB13191.1| NADH dehydrogenase subunit J [Persicaria lapathifolia]
gi|176044195|gb|ACB72811.1| NADH dehydrogenase subunit J [Polygonum orientale]
Length = 130
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGMLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGILYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|176044330|gb|ACB72815.1| NADH dehydrogenase subunit J [Polygonum plebeium]
Length = 130
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP---KYNRRL 87
+L + D S+ L + + C D V + + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGGEQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|164513064|emb|CAP11625.1| NADH dehydrogenase subunit J [Weinmannia fraxinea]
Length = 129
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L V D S+ L + + C D V + +
Sbjct: 11 TLQVKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEHGIDQPEEV 67
Query: 88 RVKIA-VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + +PS ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 68 CIKVFALRRNPRIPSAFWVWKSADFQERESFDMLGISYDNHPRLKRILMPESWIGWPLRK 127
Query: 147 DF 148
D+
Sbjct: 128 DY 129
>gi|114329749|ref|YP_740568.1| NADH-plastoquinone oxidoreductase subunit J [Platanus occidentalis]
gi|122166032|sp|Q09G43|NDHJ_PLAOC RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|114054387|gb|ABI49781.1| NADH-plastoquinone oxidoreductase subunit J [Platanus occidentalis]
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ L+ + +
Sbjct: 28 TLQIKSEDWHSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TRIQYGVDQPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 87 KVFAARRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 IAPNFYEIQ 155
>gi|11465960|ref|NP_054502.1| NADH dehydrogenase subunit J [Nicotiana tabacum]
gi|28261720|ref|NP_783235.1| NADH dehydrogenase subunit J [Atropa belladonna]
gi|78102538|ref|YP_358679.1| NADH dehydrogenase subunit J [Nicotiana sylvestris]
gi|81301569|ref|YP_398866.1| NADH dehydrogenase subunit J [Nicotiana tomentosiformis]
gi|128859|sp|P12201|NDHJ_TOBAC RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|75139597|sp|Q7FNS9|NDHJ_ATRBE RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|122212903|sp|Q33C31|NDHJ_NICTO RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|122213560|sp|Q3C1J9|NDHJ_NICSY RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|11836|emb|CAA77356.1| NADH dehydrogenase 30kD subunit [Nicotiana tabacum]
gi|20068334|emb|CAC88047.1| NADH dehydrogenase 19kD subunit [Atropa belladonna]
gi|77799565|dbj|BAE46654.1| NADH dehydrogenase 30kD subunit [Nicotiana sylvestris]
gi|80750928|dbj|BAE48004.1| NADH dehydrogenase 30kD subunit [Nicotiana tomentosiformis]
gi|225204|prf||1211235AJ ORF 158
Length = 158
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|164512986|emb|CAP11586.1| NADH dehydrogenase subunit J [Linaria tristis]
gi|164512988|emb|CAP11587.1| NADH dehydrogenase subunit J [Linaria vulgaris]
Length = 131
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 13 TLQIKPADWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 69
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 129
Query: 147 DF 148
D+
Sbjct: 130 DY 131
>gi|156598221|gb|ABU85374.1| NADH-plastoquinone oxidoreductase subunit J [Elaeis oleifera]
Length = 157
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 15/157 (9%)
Query: 13 VNSFSGSVRFAVNSVGEL--------SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ S + L +L + D S+ + + C D
Sbjct: 1 QDRLSDWLVKHELVHRSLGFDCRGIETLQIKTEDWYSIAVI---SYVYGYNYLRSQCAYD 57
Query: 65 FLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + + +K+ V + S+ I+ AD+ ERE +DM
Sbjct: 58 VAPGGFLASVYHLTRIQYGVDKPEEVCIKVFVPRNNPRISSVFWIWKSADFQERESYDML 117
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 118 GISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 154
>gi|149390445|ref|YP_001294273.1| NADH-plastoquinone oxidoreductase subunit J [Illicium oligandrum]
gi|218527846|sp|A6MMU7|NDHJ_ILLOL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|147917398|gb|ABQ52522.1| NADH-plastoquinone oxidoreductase subunit J [Illicium oligandrum]
Length = 158
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKPEDWHSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAKRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|253729560|ref|YP_003029743.1| NdhJ [Bambusa oldhamii]
gi|246367070|gb|ACS94681.1| NdhJ [Bambusa oldhamii]
Length = 159
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKEGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 80 DNPEEICIKVFAQKDNPRIPSVFWIWKSADFQERESYDMVGISYDNHPRLKRILMPESWI 139
Query: 141 GHPLRKDFPVTGFVELH 157
G PLRKD+ F E+
Sbjct: 140 GWPLRKDYITPNFYEIQ 156
>gi|170295867|gb|ACB13190.1| NADH dehydrogenase subunit J [Rumex japonicus]
Length = 130
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIDSGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGILYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|108773133|ref|YP_635642.1| NADH dehydrogenase subunit J [Solanum tuberosum]
gi|122209892|sp|Q2VEH4|NDHJ_SOLTU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|82754630|gb|ABB90044.1| NADH dehydrogenase subunit J [Solanum tuberosum]
gi|88656807|gb|ABD47060.1| NADH-plastoquinone oxidoreductase subunit J [Solanum tuberosum]
Length = 158
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L + D S+ + + C D V + L
Sbjct: 28 TLQIKPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDDVDQPEEL 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|75755662|ref|YP_319768.1| NADH dehydrogenase subunit J [Acorus calamus]
gi|161622313|ref|YP_001586185.1| NADH dehydrogenase subunit J [Acorus americanus]
gi|122217415|sp|Q3V531|NDHJ_ACOCL RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|218527794|sp|A9LYA4|NDHJ_ACOAM RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|74381712|emb|CAI53797.1| NADH dehydrogenase 19kDa subunit [Acorus calamus]
gi|156573653|gb|ABU85160.1| NADH-plastoquinone oxidoreductase subunit J [Acorus americanus]
gi|160369856|gb|ABX38747.1| NADH-plastoquinone oxidoreductase subunit J [Acorus americanus]
Length = 158
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + +
Sbjct: 28 ILQIKPEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TRIQYGVDQPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRKD+
Sbjct: 87 KVFAPRRNPKIPSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 IAPNFYEIQ 155
>gi|292559511|ref|YP_003540934.1| NADH-plastoquinone oxidoreductase subunit J [Phoenix dactylifera]
gi|290790919|gb|ADD63174.1| NADH-plastoquinone oxidoreductase subunit J [Phoenix dactylifera]
gi|294620580|gb|ADF28149.1| NADH-plastoquinone oxidoreductase subunit J [Phoenix dactylifera]
Length = 159
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 13 VNSFSGSVRFAVNSVGEL--------SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ S + L +L + D S+ + + C D
Sbjct: 3 QDRLSDWLVKHELVHRSLGFDCRGIETLQIKTEDWYSIAVI---SYVYGYNYLRSQCAYD 59
Query: 65 FLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
V + + +K+ V + + S+ I+ AD+ ERE +DM
Sbjct: 60 VAPGGFLASVYHLTRIQYGVDKPEEVCIKVFVPKNNPRISSVFWIWKSADFQERESYDML 119
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 120 GISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 156
>gi|264684043|emb|CAP46273.1| NADH dehydrogenase [Inga edulis]
gi|264684045|emb|CAP46274.1| NADH dehydrogenase [Inga umbellifera]
gi|264684047|emb|CAP46275.1| NADH dehydrogenase [Inga feuillei]
Length = 129
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + F D+ L+ + + +
Sbjct: 12 TLQIKPEDWHSIAVILYVYGYNYLRFQCAYDVAPGGLLAS--VYHLTRIEYGIDQPEEVC 69
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 70 IKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKD 129
>gi|170295875|gb|ACB13194.1| NADH dehydrogenase subunit J [Fallopia multiflora]
gi|176044158|gb|ACB72810.1| NADH dehydrogenase subunit J [Fallopia aubertii]
Length = 130
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GIF++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|170295865|gb|ACB13189.1| NADH dehydrogenase subunit J [Polygonum chinense]
gi|176044296|gb|ACB72814.1| NADH dehydrogenase subunit J [Rumex acetosa]
Length = 130
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGILYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|150251469|ref|YP_001312202.1| NADH dehydrogenase subunit J [Cycas taitungensis]
gi|218527827|sp|A6H5H7|NDHJ_CYCTA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|149941519|dbj|BAF64943.1| NADH dehydrogenase subunit J [Cycas taitungensis]
Length = 173
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK---YNRRL 87
+L + D S+ L F + C D + V + +
Sbjct: 43 TLQIKSEDRASVAVALYV---YGFNYLRSQCAYDVAPGGSLASVYHLTNIQDDADQPEEI 99
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I I+ AD+ ERE +DM GI E HP L+RIL + G PLRK
Sbjct: 100 CIKVFVPRKNPRIPSIFWIWKSADFQERESYDMLGILHESHPRLKRILMPESWIGWPLRK 159
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 160 DYITPNFYEIQ 170
>gi|224373441|ref|YP_002607813.1| NADH-ubiquinone oxidoreductase [Nautilia profundicola AmH]
gi|223589725|gb|ACM93461.1| NADH-ubiquinone oxidoreductase [Nautilia profundicola AmH]
Length = 549
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 5/150 (3%)
Query: 10 DYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
+ I N + V + + L + ++D + DF+
Sbjct: 2 ENIKNILNKYDMEYVEDYKSTWVKAKLKNKDDLLNVIKDLKQAGVKTCSTVSPTDFID-E 60
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAE---GKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
N+ +V Y + + +K+ + + SI + P A+W E E + +G+ F+G
Sbjct: 61 NKIEVNYFLEDLFGKKNVWLKVDIERDLENCEIDSITPLMPSANWHELEAYSTFGVKFKG 120
Query: 127 HPDLRRILTDYGFEG-HPLRKDFPVTGFVE 155
HPDLR L + G P RKDF E
Sbjct: 121 HPDLRYFLISRDYYGKFPFRKDFDWKAHEE 150
>gi|94267896|ref|ZP_01291028.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [delta
proteobacterium MLMS-1]
gi|93451815|gb|EAT02565.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [delta
proteobacterium MLMS-1]
Length = 208
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ + F+VVY F + R+ +++ V +P+I IYPGA+W ERE D +G+ F G
Sbjct: 125 QEDSFEVVYDFNHFQELCRVTLRVRVPRSLPQLPTISDIYPGANWHEREAHDFFGLVFTG 184
Query: 127 HPDLRRILTDYGFEGHPLRKDF 148
HPDL +L + HPLRKD+
Sbjct: 185 HPDLSPLLLPEDADFHPLRKDY 206
>gi|264684031|emb|CAP46267.1| NADH dehydrogenase [Inga tenuistipula]
gi|264684033|emb|CAP46268.1| NADH dehydrogenase [Inga punctata]
Length = 130
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 13 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 129
Query: 147 D 147
D
Sbjct: 130 D 130
>gi|260592326|ref|ZP_05857784.1| proton-translocating NADH-quinone oxidoreductase, D subunit
[Prevotella veroralis F0319]
gi|260535713|gb|EEX18330.1| proton-translocating NADH-quinone oxidoreductase, D subunit
[Prevotella veroralis F0319]
Length = 524
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI---AVAEGKSV 99
+ L+++ H F ++ + G DF +Y + + R VK V E +
Sbjct: 17 MAKLKNEKH--FDYLVTVVGEDF-GAEEGLGCIYILENTNTHERCSVKQLAKKVGEESVI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
PS++ ++ AD EREV+D YGI F GHPD+RR+ F+G+PLRKD+ +
Sbjct: 74 PSVIKLWADADLLEREVYDFYGIKFLGHPDMRRLFLRNDFKGYPLRKDYDM 124
>gi|116747650|ref|YP_844337.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116696714|gb|ABK15902.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Syntrophobacter
fumaroxidans MPOB]
Length = 157
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
S+ V L + + + + + L + ++VYHF + R ++
Sbjct: 33 SVRVPMERLQEVAAAC----NAGGFYLETITA---LDFKDTKELVYHFNCYEPGSRFALR 85
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ ++ P+I I+ A W EREV + +GI F G DLR +L E HPLRK F
Sbjct: 86 VLCGHDQTPPTISTIFASAGWLEREVHEFFGIQFAGSFDLRPLLLPEDAEFHPLRKTF 143
>gi|156598065|gb|ABU85298.1| NADH-plastoquinone oxidoreductase subunit J [Cycas micronesica]
Length = 158
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPK---YNRRL 87
+L + D S+ L F + C D + V + +
Sbjct: 28 TLQIKSEDRASVAVALYV---YGFNYLRSQCAYDVAPGGSLASVYHLTNIQDDADQPEEI 84
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I I+ AD+ ERE +DM GI E HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRKNPRIPSIFWIWKSADFQERESYDMLGILHESHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYITPNFYEIQ 155
>gi|154819511|gb|ABS88040.1| NADH dehydrogenase subunit J [Eragrostis tenuifolia]
Length = 128
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + GD S+ L + + C D + V + +
Sbjct: 4 TLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEV 60
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 61 CIKVFAQKDNPRIPSVFWVWRSADFQERESYDMVGISYDNHPRLKRILMPESWIGWPLRK 120
Query: 147 DF 148
D+
Sbjct: 121 DY 122
>gi|317503350|ref|ZP_07961397.1| NADH-quinone oxidoreductase subunit C/D [Prevotella salivae DSM
15606]
gi|315665529|gb|EFV05149.1| NADH-quinone oxidoreductase subunit C/D [Prevotella salivae DSM
15606]
Length = 523
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ + + + L+++ H F ++ + G DF +Y + + + R V+
Sbjct: 6 IELQFDNFAAEMAKLKNEKH--FDYLVTIIGEDFGE--EGLGCIYILENTESHERCSVRT 61
Query: 92 ---AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ E +P+ + ++ A+ EREV+D GI F GHPD+RR+ F+G+PLRK F
Sbjct: 62 IAKQIGEEYVIPTTINLWNAANLLEREVFDFLGIKFLGHPDMRRLFMRNDFKGYPLRKHF 121
Query: 149 P 149
Sbjct: 122 D 122
>gi|151367634|gb|ABS10585.1| NADH dehydrogenase subunit J [Tacca chantieri]
Length = 127
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V + +
Sbjct: 3 TLQIKTEDWDSIAVISYI-----YGYNYLRSQCAYDVSPGGFLASVYHLTRIQYGIDKSE 57
Query: 86 RLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ V+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 58 EVCIKVFVSRNNPPIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 117
Query: 145 RKDF 148
RKD+
Sbjct: 118 RKDY 121
>gi|198279811|emb|CAP03404.1| NADH dehydrogenase subunit J [Dactylorhiza euxina]
Length = 143
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 13 ILQIKNEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A+ PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 72 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 131
Query: 149 PVTGFVELH 157
F E+
Sbjct: 132 ITPNFYEIQ 140
>gi|198279693|emb|CAP03345.1| NADH dehydrogenase subunit J [Conostylis tomentosa]
Length = 143
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQMPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|198279775|emb|CAP03386.1| NADH dehydrogenase subunit J [Conostylis setigera subsp. setigera]
Length = 143
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|164512928|emb|CAP11557.1| NADH dehydrogenase subunit J [Conostylis androstemma]
gi|164512930|emb|CAP11558.1| NADH dehydrogenase subunit J [Conostylis setigera]
Length = 141
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 11 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 65
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 66 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 125
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 126 RKDYITPNFYEIQ 138
>gi|18860314|ref|NP_569632.1| NADH dehydrogenase subunit J [Psilotum nudum]
gi|75162915|sp|Q8WI15|NDHJ_PSINU RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|18389467|dbj|BAB84219.1| NADH dehydrogenase 17kD subunit [Psilotum nudum]
Length = 158
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ + D S+ L F + C D + V + + +
Sbjct: 28 IIQIKSEDWPSIAVALYI---YGFNYLRSQCAYDVMPGGFLASVYHLTKLQDNADQPEEV 84
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V+ +PSI ++ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKILVSRESPKIPSIFWVWKSADFQERESYDMSGIHYESHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 145 DYVVPNFYELQ 155
>gi|160419439|gb|ABX39337.1| NADH dehydrogenase subunit J [Hordeum vulgare subsp. spontaneum]
gi|160419441|gb|ABX39338.1| NADH dehydrogenase subunit J [Hordeum bulbosum]
gi|160419443|gb|ABX39339.1| NADH dehydrogenase subunit J [Hordeum bogdanii]
gi|160419445|gb|ABX39340.1| NADH dehydrogenase subunit J [Hordeum roshevitzii]
gi|160419449|gb|ABX39342.1| NADH dehydrogenase subunit J [Hordeum intercedens]
gi|160419451|gb|ABX39343.1| NADH dehydrogenase subunit J [Hordeum brevisubulatum subsp.
iranicum]
gi|160419453|gb|ABX39344.1| NADH dehydrogenase subunit J [Hordeum marinum subsp. marinum]
gi|160419455|gb|ABX39345.1| NADH dehydrogenase subunit J [Hordeum fuegianum]
gi|160419457|gb|ABX39346.1| NADH dehydrogenase subunit J [Hordeum patagonicum subsp.
patagonicum]
Length = 130
Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPK 82
G +L + GD S+ L + + C D + V +
Sbjct: 1 HRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGID 57
Query: 83 YNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 58 NPEEVCIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWIG 117
Query: 142 HPLRKDF 148
PLRKD+
Sbjct: 118 WPLRKDY 124
>gi|156598415|gb|ABU85467.1| NADH-plastoquinone oxidoreductase subunit J [Musa acuminata]
Length = 159
Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + K
Sbjct: 29 TLQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TRIQYGIAKPEEVCI 87
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 88 KVFAPRNNPRIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 147
Query: 149 PVTGFVELH 157
F E+
Sbjct: 148 ITPNFYEIQ 156
>gi|164512916|emb|CAP11551.1| NADH dehydrogenase subunit J [Bromus hordeaceus]
gi|164512918|emb|CAP11552.1| NADH dehydrogenase subunit J [Bromus interruptus]
Length = 132
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + GD S+ L + + C D + V +
Sbjct: 8 DHRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGI 64
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 65 DNPEEVCIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWI 124
Query: 141 GHPLRKDF 148
G PLRKD+
Sbjct: 125 GWPLRKDY 132
>gi|198279783|emb|CAP03390.1| NADH dehydrogenase subunit J [Conostylis villosa]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQSGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|198279793|emb|CAP03395.1| NADH dehydrogenase subunit J [Conostylis caricina subsp. caricina]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D + V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVVPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|198278628|emb|CAO99300.1| NADH dehydrogenase subunit J [Agave aurea]
gi|198278630|emb|CAO99301.1| NADH dehydrogenase subunit J [Agave capensis]
gi|198278632|emb|CAO99302.1| NADH dehydrogenase subunit J [Agave angustiarum]
gi|198278634|emb|CAO99303.1| NADH dehydrogenase subunit J [Agave convallis]
gi|198278636|emb|CAO99304.1| NADH dehydrogenase subunit J [Agave petrophila]
gi|198278638|emb|CAO99305.1| NADH dehydrogenase subunit J [Agave striata subsp. striata]
gi|198278640|emb|CAO99306.1| NADH dehydrogenase subunit J [Agave striata]
gi|198278642|emb|CAO99307.1| NADH dehydrogenase subunit J [Agave kerchovei]
gi|198278644|emb|CAO99308.1| NADH dehydrogenase subunit J [Agave datylio]
gi|198278646|emb|CAO99309.1| NADH dehydrogenase subunit J [Agave rhodacantha]
gi|198278648|emb|CAO99310.1| NADH dehydrogenase subunit J [Agave salmiana]
gi|198278650|emb|CAO99311.1| NADH dehydrogenase subunit J [Agave titanota]
gi|198278652|emb|CAO99312.1| NADH dehydrogenase subunit J [Agave triangularis]
gi|198278654|emb|CAO99313.1| NADH dehydrogenase subunit J [Agave victoriae-reginae]
gi|198278656|emb|CAO99314.1| NADH dehydrogenase subunit J [Agave antillarum]
gi|198278658|emb|CAO99315.1| NADH dehydrogenase subunit J [Agave guiengola]
gi|198278660|emb|CAO99316.1| NADH dehydrogenase subunit J [Agave lecheguilla]
gi|198278662|emb|CAO99317.1| NADH dehydrogenase subunit J [Agave gentryi]
gi|198278664|emb|CAO99318.1| NADH dehydrogenase subunit J [Agave nizandensis]
gi|198278666|emb|CAO99319.1| NADH dehydrogenase subunit J [Agave parviflora]
gi|198278668|emb|CAO99320.1| NADH dehydrogenase subunit J [Agave potatorum]
gi|198278670|emb|CAO99321.1| NADH dehydrogenase subunit J [Furcraea guatemalensis]
gi|198278672|emb|CAO99322.1| NADH dehydrogenase subunit J [Furcraea longaeva]
gi|198278674|emb|CAO99323.1| NADH dehydrogenase subunit J [Manfreda hauniensis]
gi|198278676|emb|CAO99324.1| NADH dehydrogenase subunit J [Polianthes graminifolia]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + K
Sbjct: 13 TLQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRKD+
Sbjct: 72 KVFAPRSNPRIPSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDY 131
Query: 149 PVTGFVELH 157
F E+
Sbjct: 132 ITPNFYEIQ 140
>gi|198279689|emb|CAP03343.1| NADH dehydrogenase subunit J [Conostylis bealiana]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQTPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|154819483|gb|ABS88026.1| NADH dehydrogenase subunit J [Ambrosia trifida]
Length = 127
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + GD S+ L + + C D V + + +
Sbjct: 3 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVEQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|198279757|emb|CAP03377.1| NADH dehydrogenase subunit J [Conostylis canteriata]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ + S+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQISSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|110456716|gb|ABG74819.1| NADH dehydrogenase 19 kDa subunit [Jasminum subhumile]
Length = 158
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ L + + C D V + + +
Sbjct: 28 TLQIKPKDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGGDQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G P RK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPYRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|302345401|ref|YP_003813754.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
melaninogenica ATCC 25845]
gi|302149935|gb|ADK96197.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
melaninogenica ATCC 25845]
Length = 524
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI---AVAEGKSV 99
+ L+++ H F ++ + G DF +Y + + R VK V E +
Sbjct: 17 MAKLKNEKH--FDYLVTVVGEDF-GAEEGLGCIYILENTNTHERCSVKQLAKKVGEEHVI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
PS+ I+ AD EREV+D YG+ F GHPD+RR+ F+G+PLRKD+ +
Sbjct: 74 PSVYNIWADADLLEREVYDFYGVKFLGHPDMRRLYLRNDFKGYPLRKDYDM 124
>gi|198279711|emb|CAP03354.1| NADH dehydrogenase subunit J [Conostylis argentea]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|198279679|emb|CAP03338.1| NADH dehydrogenase subunit J [Conostylis candicans]
gi|198279681|emb|CAP03339.1| NADH dehydrogenase subunit J [Conostylis androstemma]
gi|198279683|emb|CAP03340.1| NADH dehydrogenase subunit J [Conostylis setigera]
gi|198279685|emb|CAP03341.1| NADH dehydrogenase subunit J [Conostylis vaginata]
gi|198279697|emb|CAP03347.1| NADH dehydrogenase subunit J [Conostylis dielsii subsp. dielsii]
gi|198279699|emb|CAP03348.1| NADH dehydrogenase subunit J [Conostylis aculeata subsp.
breviflora]
gi|198279701|emb|CAP03349.1| NADH dehydrogenase subunit J [Conostylis prolifera]
gi|198279703|emb|CAP03350.1| NADH dehydrogenase subunit J [Conostylis hiemalis]
gi|198279705|emb|CAP03351.1| NADH dehydrogenase subunit J [Conostylis seminuda]
gi|198279707|emb|CAP03352.1| NADH dehydrogenase subunit J [Conostylis festucacea]
gi|198279709|emb|CAP03353.1| NADH dehydrogenase subunit J [Conostylis crassinerva subsp. absens]
gi|198279715|emb|CAP03356.1| NADH dehydrogenase subunit J [Conostylis seorsiflora subsp.
seorsiflora]
gi|198279717|emb|CAP03357.1| NADH dehydrogenase subunit J [Conostylis neocymosa]
gi|198279719|emb|CAP03358.1| NADH dehydrogenase subunit J [Conostylis albescens]
gi|198279721|emb|CAP03359.1| NADH dehydrogenase subunit J [Conostylis rogeri]
gi|198279723|emb|CAP03360.1| NADH dehydrogenase subunit J [Conostylis petrophiloides]
gi|198279729|emb|CAP03363.1| NADH dehydrogenase subunit J [Conostylis drummondii]
gi|198279731|emb|CAP03364.1| NADH dehydrogenase subunit J [Conostylis pusilla]
gi|198279733|emb|CAP03365.1| NADH dehydrogenase subunit J [Conostylis setigera subsp. dasys]
gi|198279735|emb|CAP03366.1| NADH dehydrogenase subunit J [Conostylis aculeata subsp. preissii]
gi|198279737|emb|CAP03367.1| NADH dehydrogenase subunit J [Conostylis deplexa]
gi|198279741|emb|CAP03369.1| NADH dehydrogenase subunit J [Conostylis aculeata subsp. gracilis]
gi|198279743|emb|CAP03370.1| NADH dehydrogenase subunit J [Conostylis pauciflora]
gi|198279745|emb|CAP03371.1| NADH dehydrogenase subunit J [Conostylis aurea]
gi|198279747|emb|CAP03372.1| NADH dehydrogenase subunit J [Conostylis teretifolia subsp.
planescens]
gi|198279749|emb|CAP03373.1| NADH dehydrogenase subunit J [Conostylis latens]
gi|198279751|emb|CAP03374.1| NADH dehydrogenase subunit J [Conostylis aculeata subsp.
spinuligera]
gi|198279755|emb|CAP03376.1| NADH dehydrogenase subunit J [Conostylis crassinerva subsp.
crassinerva]
gi|198279759|emb|CAP03378.1| NADH dehydrogenase subunit J [Conostylis aculeata subsp.
bromelioides]
gi|198279761|emb|CAP03379.1| NADH dehydrogenase subunit J [Conostylis aculeata subsp. cygnorum]
gi|198279763|emb|CAP03380.1| NADH dehydrogenase subunit J [Conostylis caricina subsp. caricina]
gi|198279765|emb|CAP03381.1| NADH dehydrogenase subunit J [Conostylis caricina subsp. elachys]
gi|198279767|emb|CAP03382.1| NADH dehydrogenase subunit J [Conostylis prolifera]
gi|198279769|emb|CAP03383.1| NADH dehydrogenase subunit J [Conostylis misera]
gi|198279771|emb|CAP03384.1| NADH dehydrogenase subunit J [Conostylis stylidioides]
gi|198279773|emb|CAP03385.1| NADH dehydrogenase subunit J [Conostylis wonganensis]
gi|198279777|emb|CAP03387.1| NADH dehydrogenase subunit J [Conostylis bracteata]
gi|198279779|emb|CAP03388.1| NADH dehydrogenase subunit J [Conostylis teretiuscula]
gi|198279781|emb|CAP03389.1| NADH dehydrogenase subunit J [Conostylis villosa]
gi|198279787|emb|CAP03392.1| NADH dehydrogenase subunit J [Conostylis caricina subsp. elachys]
gi|198279789|emb|CAP03393.1| NADH dehydrogenase subunit J [Conostylis caricina subsp. elachys]
gi|198279791|emb|CAP03394.1| NADH dehydrogenase subunit J [Conostylis caricina subsp. elachys]
gi|198279795|emb|CAP03396.1| NADH dehydrogenase subunit J [Conostylis caricina subsp. caricina]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|164512950|emb|CAP11568.1| NADH dehydrogenase subunit J [Ephedra frustillata]
Length = 129
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 10 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 66
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 67 CIKVFAPRTNPRIPSVFWIWKSADFQERESYDMLGIAYENHPRLKRILMPESWLGWPLRK 126
Query: 147 DF 148
D+
Sbjct: 127 DY 128
>gi|154819509|gb|ABS88039.1| NADH dehydrogenase subunit J [Eragrostis pectinacea]
Length = 127
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + GD S+ L + + C D + V + +
Sbjct: 3 TLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAQKDNPRIPSVFWVWRSADFQERESYDMVGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|325269276|ref|ZP_08135894.1| NADH-quinone oxidoreductase subunit C/D [Prevotella multiformis DSM
16608]
gi|324988403|gb|EGC20368.1| NADH-quinone oxidoreductase subunit C/D [Prevotella multiformis DSM
16608]
Length = 524
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI---AVAEGKSV 99
+ L+++ H F ++ + G DF +Y + + R V+ V E V
Sbjct: 17 MAKLKNEKH--FDYLVTVVGEDF-GAEEGLGCIYILENTDTHERCSVRQLAKKVGEESVV 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
PS+ ++ AD EREV+D YGI F GHPD+RR+ F+G+PLRKD+ +
Sbjct: 74 PSVCRLWADADLLEREVYDFYGIKFLGHPDMRRLYLRNDFKGYPLRKDYDM 124
>gi|198279797|emb|CAP03397.1| NADH dehydrogenase subunit J [Dactylorhiza iberica]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 13 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A+ PS+ I+ AD+ ERE +DM GIF++ HP L+RIL + G PLRKD+
Sbjct: 72 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRKDY 131
Query: 149 PVTGFVELH 157
F E+
Sbjct: 132 ITPNFYEIQ 140
>gi|164512884|emb|CAP11535.1| NADH dehydrogenase subunit J [Acorus calamus]
gi|164512886|emb|CAP11536.1| NADH dehydrogenase subunit J [Acorus gramineus]
Length = 142
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + +
Sbjct: 12 ILQIKPEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TRIQYGVDQPEEVCI 70
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRKD+
Sbjct: 71 KVFAPRRNPKIPSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDY 130
Query: 149 PVTGFVELH 157
F E+
Sbjct: 131 IAPNFYEIQ 139
>gi|198279039|emb|CAP04553.1| NADH dehydrogenase subunit J [Conostylis teretifolia subsp.
teretifolia]
Length = 135
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 5 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 59
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 60 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 119
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 120 RKDYITPNFYEIQ 132
>gi|198279695|emb|CAP03346.1| NADH dehydrogenase subunit J [Conostylis micrantha]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ + S+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQISSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|154175503|ref|YP_001407623.1| phage integrase family site specific recombinase [Campylobacter
curvus 525.92]
gi|112802279|gb|EAT99623.1| site-specific recombinase, phage integrase family [Campylobacter
curvus 525.92]
Length = 578
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 26/171 (15%)
Query: 9 GDYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
GD + V+ + ++++ V+ DL L D I + D
Sbjct: 3 GDKFIEILRTKVKILEVTRQADDQVTVLVERNDLPLAVKTLYYDIG---GFISTMIPNDE 59
Query: 66 LSRSNRFDVVYHFLS------------PKYNRRLRVKIAVA-EGKSVPSIVGIYPGADWF 112
+ F + Y P+ + VK + + PS+ + P W+
Sbjct: 60 REINGCFALYYALSMEGSKMTADDDFAPEDKCFITVKTLIPGVDPTFPSVTPLVPACVWY 119
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVELHYDDK 161
ERE +DM+G+ EG PD RR++ + HPLRKD ++ Y
Sbjct: 120 EREAFDMFGLVAEGLPDRRRLVLSDDWPDGLHPLRKD-----AMDYRYRPD 165
>gi|198279785|emb|CAP03391.1| NADH dehydrogenase subunit J [Conostylis laxiflora]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPCLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFXEIQ 140
>gi|156573617|gb|ABU85144.1| NADH-plastoquinone oxidoreductase subunit J [Yucca schidigera]
Length = 158
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + K
Sbjct: 28 TLQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 86
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRKD+
Sbjct: 87 KVFAPRSNPRIPSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 ITPNFYEIQ 155
>gi|317123871|ref|YP_004097983.1| NADH dehydrogenase subunit C [Intrasporangium calvum DSM 43043]
gi|315587959|gb|ADU47256.1| NADH dehydrogenase subunit C [Intrasporangium calvum DSM 43043]
Length = 180
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNII-----DLCGVDFLSRS----NRFDVVYHFLSPKY 83
DV G+ S LRD+ + F + D + + + + +P
Sbjct: 8 DVPFGEWSSTVLVLRDEGYSFFDWLTAVDQTDATAETQGEDAVAGFDIYCHLARVAAPGS 67
Query: 84 NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD-----LRRILTDYG 138
+ ++ EG VPSI G +PGA W ERE ++M+GI F+G D LR +L G
Sbjct: 68 LESVLLRTRAPEGLPVPSITGAFPGAAWHERETFEMFGIEFDGFTDRSGEGLRPLLLPDG 127
Query: 139 FEGHPLRKDFPVT 151
FEG+PLRK F +T
Sbjct: 128 FEGYPLRKSFVLT 140
>gi|198279049|emb|CAP04558.1| NADH dehydrogenase subunit J [Gymnadenia nigra]
Length = 140
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 13 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A+ PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 72 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 131
Query: 149 PVTGFVELH 157
F E+
Sbjct: 132 ITPNFYEIQ 140
>gi|154819481|gb|ABS88025.1| NADH dehydrogenase subunit J [Ambrosia artemisiifolia]
Length = 128
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + GD S+ L + + C D V + +
Sbjct: 4 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 60
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 61 CIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 120
Query: 147 DF 148
D+
Sbjct: 121 DY 122
>gi|198279803|emb|CAP03400.1| NADH dehydrogenase subunit J [Dactylorhiza majalis]
gi|198279809|emb|CAP03403.1| NADH dehydrogenase subunit J [Dactylorhiza maculata subsp.
ericetorum]
gi|198279817|emb|CAP03407.1| NADH dehydrogenase subunit J [Dactylorhiza elata]
gi|198279819|emb|CAP03408.1| NADH dehydrogenase subunit J [Dactylorhiza aristata]
gi|198279821|emb|CAP03409.1| NADH dehydrogenase subunit J [Dactylorhiza sambucina]
gi|198279823|emb|CAP03410.1| NADH dehydrogenase subunit J [Dactylorhiza romana]
gi|198279827|emb|CAP03412.1| NADH dehydrogenase subunit J [Dactylorhiza saccifera]
Length = 143
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 13 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A+ PS+ I+ AD+ ERE +DM GIF++ HP L+RIL + G PLRKD+
Sbjct: 72 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRKDY 131
Query: 149 PVTGFVELH 157
F E+
Sbjct: 132 ITPNFYEIQ 140
>gi|154819501|gb|ABS88035.1| NADH dehydrogenase subunit J [Curcuma attenuata]
gi|154819503|gb|ABS88036.1| NADH dehydrogenase subunit J [Curcuma cochinchinensis]
Length = 128
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGICYDSHPRLKRILMPESWIGWPLRK 119
Query: 147 DFPVTGFVE 155
D+ F E
Sbjct: 120 DYIAPNFYE 128
>gi|18313692|ref|NP_560359.1| NADH-ubiquinone oxidoreductase subunit [Pyrobaculum aerophilum str.
IM2]
gi|18161244|gb|AAL64541.1| NADH-ubiquinone oxidoreductase subunit [Pyrobaculum aerophilum str.
IM2]
Length = 177
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 8 LGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L + + V V G L + V + + + ++ + F +++ L +D++
Sbjct: 17 LLGKVKEALGALVLTHGVTPEGHLCVMVPPDKVRDVANAVK---NMGFDHVLSLSAIDYM 73
Query: 67 SRSNRFDVVYHFLSPKYNRR---LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
+ + + L V+ + + SI I+P AD+ ERE +M+GI
Sbjct: 74 AEGKFVVMYVFASYLTPELKAQLLHVRTEIPRDNPKIASIADIFPSADYEERECHEMFGI 133
Query: 123 FFEGHPDL-RRILTDYG--------FEGHPLRKDF 148
+FEG+P++ +R L D +PLRKDF
Sbjct: 134 WFEGNPNMGKRFLLDPDCCIDEKTGKPLYPLRKDF 168
>gi|198279801|emb|CAP03399.1| NADH dehydrogenase subunit J [Dactylorhiza incarnata subsp.
pulchella]
gi|198279805|emb|CAP03401.1| NADH dehydrogenase subunit J [Dactylorhiza incarnata subsp.
incarnata]
gi|198279807|emb|CAP03402.1| NADH dehydrogenase subunit J [Dactylorhiza incarnata subsp.
cruenta]
gi|198279813|emb|CAP03405.1| NADH dehydrogenase subunit J [Gymnadenia conopsea]
gi|198279815|emb|CAP03406.1| NADH dehydrogenase subunit J [Dactylorhiza ochroleuca]
gi|198279825|emb|CAP03411.1| NADH dehydrogenase subunit J [Coeloglossum viride]
Length = 143
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 13 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A+ PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 72 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 131
Query: 149 PVTGFVELH 157
F E+
Sbjct: 132 ITPNFYEIQ 140
>gi|198279713|emb|CAP03355.1| NADH dehydrogenase subunit J [Conostylis serrulata subsp.
serrulata]
gi|198279739|emb|CAP03368.1| NADH dehydrogenase subunit J [Conostylis laxiflora]
Length = 143
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPCLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|164513014|emb|CAP11600.1| NADH dehydrogenase subunit J [Myrcia coumeta]
gi|164513016|emb|CAP11601.1| NADH dehydrogenase subunit J [Myrcia fallax]
Length = 134
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 13 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQTEEV 69
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 70 CIKVFAPRSNPRIPSVFWIWKSADFQERESYDMLGICYDTHPRLKRILMPESWIGWPLRK 129
Query: 147 DF 148
D+
Sbjct: 130 DY 131
>gi|154819525|gb|ABS88047.1| NADH dehydrogenase subunit J [Lagenaria sphaerica]
gi|154819527|gb|ABS88048.1| NADH dehydrogenase subunit J [Lagenaria siceraria]
Length = 127
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + + S+ L + + C D V + + +
Sbjct: 3 TLQIKPEEWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 59
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAARINPRIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|164512970|emb|CAP11578.1| NADH dehydrogenase subunit J [Hieracium leyianum]
gi|164512972|emb|CAP11579.1| NADH dehydrogenase subunit J [Hieracium pellucidum]
Length = 128
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + GD S+ L + + C D V + +
Sbjct: 10 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 66
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 67 CIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 126
Query: 147 DF 148
D+
Sbjct: 127 DY 128
>gi|154819549|gb|ABS88059.1| NADH dehydrogenase subunit J [Passiflora incarnata]
Length = 128
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 4 TLQIKPEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 60
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 61 CIKVFAPRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPKSWIGWPLRK 120
Query: 147 DF 148
D+
Sbjct: 121 DY 122
>gi|288803377|ref|ZP_06408810.1| NADH dehydrogenase I, D subunit [Prevotella melaninogenica D18]
gi|288334197|gb|EFC72639.1| NADH dehydrogenase I, D subunit [Prevotella melaninogenica D18]
Length = 524
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI---AVAEGKSV 99
+ L+++ H F ++ + G DF +Y + + R VK V E +
Sbjct: 17 MAKLKNEKH--FDYLVTVVGEDF-GAEEGLGCIYILENTNTHERCSVKQLAKKVGEEHVI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
PS+ I+ AD EREV+D YG+ F GHPD+RR+ F+G+PLRKD+ +
Sbjct: 74 PSVYNIWADADLLEREVYDFYGVKFLGHPDMRRLYLRNDFKGYPLRKDYNM 124
>gi|160419459|gb|ABX39347.1| NADH dehydrogenase subunit J [Scalesia stewartii]
gi|160419461|gb|ABX39348.1| NADH dehydrogenase subunit J [Scalesia pedunculata]
gi|160419463|gb|ABX39349.1| NADH dehydrogenase subunit J [Scalesia helleri]
gi|160419465|gb|ABX39350.1| NADH dehydrogenase subunit J [Scalesia aspera]
gi|160419467|gb|ABX39351.1| NADH dehydrogenase subunit J [Scalesia crockeri]
Length = 124
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + GD S+ L + + C D V + +
Sbjct: 6 TLQIKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 63 CIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|176044018|gb|ACB72806.1| NADH dehydrogenase subunit J [Rheum officinale]
gi|176044052|gb|ACB72807.1| NADH dehydrogenase subunit J [Rheum palmatum]
gi|176044089|gb|ACB72808.1| NADH dehydrogenase subunit J [Rheum tanguticum]
gi|176044260|gb|ACB72813.1| NADH dehydrogenase subunit J [Rheum rhaponticum]
Length = 130
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDVEPGGLLASVYHLTRIESGVDQPEEV 62
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ D+ ERE +DM GIF++ HP +RIL + G PLRK
Sbjct: 63 CIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYDNHPRPKRILMPESWIGWPLRK 122
Query: 147 DF 148
D+
Sbjct: 123 DY 124
>gi|154819537|gb|ABS88053.1| NADH dehydrogenase subunit J [Magnolia grandiflora]
gi|154819539|gb|ABS88054.1| NADH dehydrogenase subunit J [Magnolia virginiana]
Length = 128
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 4 TLQIKPEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTKIEYGVDQPEEV 60
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 61 CIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRK 120
Query: 147 DF 148
D+
Sbjct: 121 DY 122
>gi|325857155|ref|ZP_08172445.1| hypothetical protein HMPREF9303_1451 [Prevotella denticola CRIS
18C-A]
gi|327313380|ref|YP_004328817.1| hypothetical protein HMPREF9137_1116 [Prevotella denticola F0289]
gi|325483218|gb|EGC86196.1| hypothetical protein HMPREF9303_1451 [Prevotella denticola CRIS
18C-A]
gi|326945241|gb|AEA21126.1| conserved hypothetical protein [Prevotella denticola F0289]
Length = 524
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI---AVAEGKSV 99
+ L+++ H F ++ + G DF +Y + + R VK V E +
Sbjct: 17 MAKLKNEKH--FDYLVTVVGEDF-GAEEGLGCIYILENTDTHERCSVKQLAKRVGEESVI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
PS++ ++ AD EREV+D YGI F GHPD+RR+ F+G+PLRKD+ +
Sbjct: 74 PSVLNLWADADLLEREVYDFYGIKFLGHPDMRRLFLRNDFKGYPLRKDYDM 124
>gi|34500917|ref|NP_904102.1| NADH dehydrogenase subunit J [Amborella trichopoda]
gi|75275910|sp|Q70Y00|NDHJ_AMBTC RecName: Full=NAD(P)H-quinone oxidoreductase subunit J,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit J; AltName: Full=NADH-plastoquinone
oxidoreductase subunit J
gi|34481632|emb|CAD45110.1| NADH dehydrogenase 19kDa subunit [Amborella trichopoda]
Length = 158
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 28 TLQIKSEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ +D+ ERE +DM GI+++ HP L+RIL + G PLRK
Sbjct: 85 CIKVFAQRRNPRIPSVFWIWKSSDFQERESYDMLGIYYDNHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|164512992|emb|CAP11589.1| NADH dehydrogenase subunit J [Lycopodium magellanicum]
Length = 128
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 10 TLQIKTEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGVDKPEEV 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V + S+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 67 CIKVFVPRNNPRISSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 126
Query: 147 DF 148
D+
Sbjct: 127 DY 128
>gi|289065092|ref|YP_003433978.1| NADH-plastoquinone oxidoreductase subunit J [Typha latifolia]
gi|281371775|gb|ADA63702.1| NADH-plastoquinone oxidoreductase subunit J [Typha latifolia]
Length = 159
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 13/156 (8%)
Query: 13 VNSFSGSVRFAVNSVGEL--------SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCG 62
+ S + L +L + D +++ S++ + D+
Sbjct: 3 QDRLSDWLVKHELVHRSLGFDYRGIETLQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAP 62
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYG 121
FL+ + + + +K+ V I+ AD+ ERE +DM G
Sbjct: 63 GGFLAS--VYHLTRIQYGIDKPEEVCIKVFAPRDNPRIPSVFWIWRSADFQERESYDMLG 120
Query: 122 IFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
I ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 121 ISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 156
>gi|154250404|ref|YP_001411229.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154154340|gb|ABS61572.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Fervidobacterium
nodosum Rt17-B1]
Length = 187
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 69/172 (40%), Gaps = 7/172 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGS-VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
M + ++ + + + + V + + + L + L+ + ++
Sbjct: 1 MTNSMNNVQEILESIKNAYGVEILQIDTRQYKIISQPEKTIPLLTHLKSQ---GYSHLSI 57
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
L VD++ + V L + ++ ++P A+W+ER+V +
Sbjct: 58 LTCVDWIEQKKFELVYILMNWSNGVTFLVSTFIDRDNPVFTTVKDMWPTAEWYERDVHEF 117
Query: 120 YGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVTGFVELHY--DDKVKKVVYR 168
+G+ FEG+ + ++ + + PLRKDF + + HY + K V++
Sbjct: 118 FGVEFEGNENCKKPMILEVWNDLPPLRKDFDPLKYSKEHYPDREYEKDVIHE 169
>gi|154819487|gb|ABS88028.1| NADH dehydrogenase subunit J [Amorphophallus titanum]
Length = 127
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + +
Sbjct: 3 TLQIKPEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TRIQYGVDQPEEVCI 61
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A + +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 62 KVFASRKNPRIPSVFWVWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 121
>gi|315231250|ref|YP_004071686.1| energy-conserving NiFe-hydrogenase (ferredoxin) subunit beta
[Thermococcus barophilus MP]
gi|315184278|gb|ADT84463.1| energy-conserving NiFe-hydrogenase (ferredoxin) beta subunit
[Thermococcus barophilus MP]
Length = 172
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 10/150 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-----VGELSLDVDCGDLVSLCSFLRD-DPHCCFVNIID 59
E+ + I F + + ++VD L FL++ +P F II
Sbjct: 4 EEFAERIKAKFEEISIRITENKLPHPRKRVWIEVDRERFKELVRFLKEVNPTAQFSIIIA 63
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
D L+ +++ + + + +P+I I+P + +EREV +
Sbjct: 64 EDRGDRLTAKYHWEMFWEQG--ESLSVIVGTSCPKNDPVLPTITDIFPSSLPYEREVQEF 121
Query: 120 YGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
GI +EG PD RR+ F +PLR D
Sbjct: 122 LGIKYEGIPDPRRLFLPDDFPEGIYPLRLD 151
>gi|154819551|gb|ABS88060.1| NADH dehydrogenase subunit J [Passiflora quadrangularis]
Length = 127
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPKSWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|281419771|ref|ZP_06250770.1| proton-translocating NADH-quinone oxidoreductase, D subunit
[Prevotella copri DSM 18205]
gi|281406147|gb|EFB36827.1| proton-translocating NADH-quinone oxidoreductase, D subunit
[Prevotella copri DSM 18205]
Length = 523
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+++ + S + L+++ H F ++ + G DF +Y + + N R VK
Sbjct: 6 IELSFDNFASEMAKLKNEKH--FDYLVTIIGEDFGE--EGLGCIYILENTQTNERCSVKT 61
Query: 92 A---VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
V +P+++ ++ AD EREV+D GI F GHPD+RR+ F+G+PLRKDF
Sbjct: 62 IAKKVDGSDVIPTVINLWKVADLLEREVFDFVGIKFLGHPDMRRLFLRTDFQGYPLRKDF 121
Query: 149 PVT 151
++
Sbjct: 122 DMS 124
>gi|160419447|gb|ABX39341.1| NADH dehydrogenase subunit J [Hordeum euclaston]
Length = 130
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPK 82
G +L + GD S+ L + + C D + V +
Sbjct: 1 HRGIETLQIKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGID 57
Query: 83 YNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+ +K+ + V I+ AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 58 NPEEVCIKVFAQKENPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWIG 117
Query: 142 HPLRKDF 148
PLRKD+
Sbjct: 118 WPLRKDY 124
>gi|297526162|ref|YP_003668186.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Staphylothermus
hellenicus DSM 12710]
gi|297255078|gb|ADI31287.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Staphylothermus
hellenicus DSM 12710]
Length = 184
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 60/148 (40%), Gaps = 10/148 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVG-----ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ + + + G + ++++ DL + ++D + + I +
Sbjct: 2 EIDKELIEKLPDKYKNSFSVEGTDTGKRIEINIEPQDLCKVLPAVKD---AGYDHFIGIT 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWF-EREVWDMY 120
+D+ ++ V K + + ++ + V ++ E E ++ +
Sbjct: 59 VIDYPDQNAFELVYLIDSISKNGQLVAIRTKLPRDNPVIDTASFIYPLAYYQEIEAYEFF 118
Query: 121 GIFFEGHPDLRRILTDYGFEG-HPLRKD 147
GI F H LR+ + + ++G PLRKD
Sbjct: 119 GIRFNNHDGLRKWILEDNWQGPPPLRKD 146
>gi|154819519|gb|ABS88044.1| NADH dehydrogenase subunit J [Hydrangea xanthoneura]
Length = 127
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSPCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSAFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|154819533|gb|ABS88051.1| NADH dehydrogenase subunit J [Ludisia discolor]
gi|154819535|gb|ABS88052.1| NADH dehydrogenase subunit J [Ludisia discolor]
Length = 127
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + K
Sbjct: 3 TLQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIQYGIDKPEEVCI 61
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRKD+
Sbjct: 62 KVFAPRSNPKTPSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDY 121
>gi|268680485|ref|YP_003304916.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sulfurospirillum
deleyianum DSM 6946]
gi|268618516|gb|ACZ12881.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sulfurospirillum
deleyianum DSM 6946]
Length = 579
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 72/201 (35%), Gaps = 37/201 (18%)
Query: 10 DYIVNSFSGSVRFAVNSV---GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
D + + + + +++ V+ DL FL D + + D
Sbjct: 4 DKFIEALRSKINILDVTRECDDQVTALVELNDLPEAVRFLYYDMG---GYLSTMIPNDER 60
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS--------------VPSIVGIYPGADWF 112
S + + + Y S + + + K PS+ + P W+
Sbjct: 61 SINKHYALYYAL-SMEGGKMFEGDEIAQDEKCFVTIKALVSPESLTYPSVTPLVPACVWY 119
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVELHYDDKVKKVVYRPV 170
ERE +DM+G+ EG PD RR+ + PLRKD ++ Y +K P
Sbjct: 120 EREAYDMFGLVAEGLPDKRRLALSDDWPEGLFPLRKD-----AMDYRYRPDMKDHYMEP- 173
Query: 171 ELMQEHRDYDFLSPWEGVNSL 191
+Y+FL P EG +
Sbjct: 174 -------EYEFLRP-EGSGII 186
>gi|325295365|ref|YP_004281879.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065813|gb|ADY73820.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 152
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ED+ + I F ++ L + + + FL+ F + VD
Sbjct: 2 LEDIKERIQEEFGFKTEPYDTNI--LLVHGEKEKIKDFLKFLKHS---GFNYPHTISVVD 56
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIF 123
+ + F + Y + + + + V++ + E + + ++P ERE W+M+GI
Sbjct: 57 YTPKGEGFQINYIIENIEEKKFVIVRVNLLEDELFIPSVCDVFPALQPHEREAWEMFGIE 116
Query: 124 FEGHPDLRRILTDYGFEG-HPLRKDFPVTGF 153
F G+P L +L +G PLRK +
Sbjct: 117 FVGNPRLEVMLLPEWAKGTFPLRKSYDFEKH 147
>gi|164512920|emb|CAP11553.1| NADH dehydrogenase subunit J [Carex muricata subsp. lamprocarpa]
Length = 124
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + K
Sbjct: 4 TLQIKNEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 62
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A PS+ I+ AD+ ERE +DM GIF+E HP L+RIL + G PLRKD+
Sbjct: 63 KVFAPRSNPRTPSVFWIWRSADFQERESYDMLGIFYENHPRLKRILMPESWIGWPLRKDY 122
>gi|154819517|gb|ABS88043.1| NADH dehydrogenase subunit J [Hydrangea macrophylla]
Length = 127
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVILYV---YGYNYLRSPCAYDVAPGGLLASVYHLTRIEYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFAPRRNPRIPSAFWVWKSLDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|288801145|ref|ZP_06406601.1| NADH dehydrogenase I, D subunit [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332079|gb|EFC70561.1| NADH dehydrogenase I, D subunit [Prevotella sp. oral taxon 299 str.
F0039]
Length = 522
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI 102
+ L++D H F ++ + G DF + ++ A +PS+
Sbjct: 17 MAKLKNDQHFDF--LVTIVGEDFGEEGLGCIYILENTLTHERMSVKAVNANRNEAYIPSV 74
Query: 103 VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
++ A+ EREV+D +GI F G+PD+RRI F G+P+RKD+ +
Sbjct: 75 SHLWKAAEILEREVYDFFGIVFTGNPDMRRIFLRSDFVGYPMRKDYDM 122
>gi|146277730|ref|YP_001167889.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodobacter sphaeroides ATCC 17025]
gi|218534335|sp|A4WT70|NUOCD_RHOS5 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|145555971|gb|ABP70584.1| NADH dehydrogenase I, D subunit [Rhodobacter sphaeroides ATCC
17025]
Length = 580
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 1 MV--RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M + I D + + F + G L + + FLR++ F +
Sbjct: 1 MSFDQVIADALQALRSRFGADILSEQATGEGFPVLWLAAPAWEAAHRFLREEISAPFPLL 60
Query: 58 IDLCGVDFLSRSNR-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGAD 110
DL +D R +R + H +S + N LR+K +A PS+ G+Y AD
Sbjct: 61 ADLWAIDESQRQHRAGQPASRLTLCSHLVSLERNADLRLK--LATDGRAPSVAGVYANAD 118
Query: 111 WFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
W+ERE DM+G+ F G RR+L +EGHPL K
Sbjct: 119 WYEREAHDMFGLDF-GRE-TRRLLMPPTWEGHPLLKTH 154
>gi|304382882|ref|ZP_07365365.1| NADH dehydrogenase I [Prevotella marshii DSM 16973]
gi|304336067|gb|EFM02314.1| NADH dehydrogenase I [Prevotella marshii DSM 16973]
Length = 522
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV--AEGKSVP 100
LR++ H F ++ + G DF +Y + + + R+ VK+ + +P
Sbjct: 17 MEKLRNEQHLDF--LVTIIGEDFGE--EGLGCIYLLENTETHERISVKLIAKERDNAYLP 72
Query: 101 SIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDD 160
S+ ++ GA+ EREV+D YGI F G+PD+RR+ F+G+P RKD+ + D
Sbjct: 73 SVCHLWKGAELLEREVYDFYGIRFIGNPDMRRLFLRSDFQGYPFRKDYDM--------DP 124
Query: 161 KVKKVVYR 168
+ K
Sbjct: 125 EKNKFPLE 132
>gi|14521672|ref|NP_127148.1| hydrogenase-4 component g [Pyrococcus abyssi GE5]
gi|5458891|emb|CAB50378.1| Hydrogenase 4, component G or formate hydrogen lyase, subunit 5
[Pyrococcus abyssi GE5]
Length = 588
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 49/143 (34%), Gaps = 10/143 (6%)
Query: 14 NSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF------L 66
F + S G+ +D L + + P ++ G D
Sbjct: 31 EEFKEHIHECKRMSYGQYMFVIDKEVLPKAVLWWHNHPKFKETHLSTAVGTDETPLNGKF 90
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
+ V + N + +K + PS+ P A W EREV D+ G
Sbjct: 91 AYMPFLSVQVEPFNMDRNYWVFLKAYLDPENPEFPSVAAELPAALWIEREVQDLLGFKAI 150
Query: 126 GHPDLRRILTDYGFEG--HPLRK 146
HPD RR++ + +PLRK
Sbjct: 151 NHPDPRRLVLPEDWPDGVYPLRK 173
>gi|164512956|emb|CAP11571.1| NADH dehydrogenase subunit J [Erica bocquetii]
Length = 125
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 9 TLQIKPEDWHSIAIILYV---YGYNYLRSQCAYDVAPGGQLASVYHLTRIEYGVDQPEEV 65
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 66 RIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 125
>gi|154819565|gb|ABS88067.1| NADH dehydrogenase subunit J [Sabal etonia]
Length = 127
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 3 TLQIKTEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGVDKPEEV 59
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V + + S+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 60 CIKVFVPKNNPRISSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|198279725|emb|CAP03361.1| NADH dehydrogenase subunit J [Conostylis breviscapa]
Length = 143
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPEIPSVFWIWRSADFQERESYDMLGISYDDHPRLKRILMPESWTGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|164513022|emb|CAP11604.1| NADH dehydrogenase subunit J [Ophrys araneola]
gi|164513024|emb|CAP11605.1| NADH dehydrogenase subunit J [Ophrys episcopalis]
Length = 130
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 12 ILQIKSEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 70
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A+ PS+ I+ AD+ ERE +DM GI+++ HP L+RIL + G PLRKD+
Sbjct: 71 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGIYYDNHPRLKRILMPESWIGWPLRKDY 130
>gi|151367630|gb|ABS10583.1| NADH dehydrogenase subunit J [Papaver bracteatum]
Length = 127
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ L+ + +
Sbjct: 3 TLQIKPEDWHSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TRIEYGVDQPEEVCI 61
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI + HP L+RIL + G PLRKD+
Sbjct: 62 KVFAPRINPRIPSVFWIWKSADFQERESYDMLGISYNNHPRLKRILMPESWIGWPLRKDY 121
>gi|126022827|ref|NP_777416.2| NADH dehydrogenase subunit J [Anthoceros formosae]
Length = 159
Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ L + C D V + + +
Sbjct: 29 TLQVRSEDWLSIAVAL---YAYGSNYLRPQCVYDVALGGLLASVYHPTKVQSNADQPEEV 85
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+KI V + +P + ++ GAD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 86 CIKIFVSRKNPKIPFVFWVWKGADFQERESYDMLGISYESHPRLKRILMPDSWIGWPLRK 145
Query: 147 DFPVTGFVELH 157
D+ V F EL
Sbjct: 146 DYIVPNFYELQ 156
>gi|264684053|emb|CAP46278.1| NADH dehydrogenase [Inga feuillei]
Length = 127
Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + F D+ L+ + + +
Sbjct: 11 TLQIKPEDWHSIAVILYVYGYNYLRFQCAYDVAPGGLLAS--VYHLTRIEYGIDQPEEVC 68
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 69 IKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 127
>gi|182414280|ref|YP_001819346.1| NADH dehydrogenase (quinone) [Opitutus terrae PB90-1]
gi|177841494|gb|ACB75746.1| NADH dehydrogenase (quinone) [Opitutus terrae PB90-1]
Length = 531
Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 6/145 (4%)
Query: 10 DYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
D + F G ++ + EL L +LCS L ++ + D +
Sbjct: 12 DELQQRFEGQLQRVDASQPDELHLHAPLELASALCSTLYRKSGGR---LVSVFAEDGRAG 68
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGH 127
F V Y + + + V++ V + + S+ +W ERE+ D++G+ GH
Sbjct: 69 GAGFYVYYLYAVDAAHGFVLVRVVVPAERPELISLTNAVHAVNWQEREIQDLFGLKLVGH 128
Query: 128 PDLRRILTDYGFEG-HPLRKDFPVT 151
P+ RR + + PLRKDF +
Sbjct: 129 PNPRRCVLHDDWPEVFPLRKDFDLQ 153
>gi|327311106|ref|YP_004338003.1| NADH-quinone oxidoreductase subunit C [Thermoproteus uzoniensis
768-20]
gi|326947585|gb|AEA12691.1| NADH-quinone oxidoreductase subunit C [Thermoproteus uzoniensis
768-20]
Length = 177
Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 26/171 (15%)
Query: 1 MVRKI---------EDLGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDP 50
M K+ L I + + V++ G L + V G + + L+
Sbjct: 1 MSAKLPPKCPPQADHPLLPKIKEALGDMLLSHGVSADGYLCVMVPAGRIREVAQKLK--- 57
Query: 51 HCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI----AVAEGKSVPSIVGIY 106
F + + +D++ + + + + + SI I+
Sbjct: 58 ELGFDQALSVSAMDYMEEKKFVMLYTFMSYLTPELKGHILNVRAEIPRDNPHIASIADIF 117
Query: 107 PGADWFEREVWDMYGIFFEGHPDL-RRILTDYG--------FEGHPLRKDF 148
P AD+ ERE +M+GI+F+G+P + +R L D +PLR+DF
Sbjct: 118 PSADYDERECHEMFGIWFDGNPHMGKRFLLDPDCCIDEKTGKPLYPLRRDF 168
>gi|110456748|gb|ABG74843.1| NADH dehydrogenase 19 kDa subunit [Menodora longiflora]
Length = 158
Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRR 86
+L + D S+ + + C D V + + +
Sbjct: 28 TLQIKPKDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGEDQPEEV 84
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A +PS+ ++ D+ ERE +DM GI ++ HP L RIL + G PLRK
Sbjct: 85 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLNRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPNFYEIQ 155
>gi|153869971|ref|ZP_01999466.1| NADH dehydrogenase subunit C [Beggiatoa sp. PS]
gi|152073561|gb|EDN70532.1| NADH dehydrogenase subunit C [Beggiatoa sp. PS]
Length = 177
Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++ + + + V L + + L +L L+ ++++ +
Sbjct: 1 MSQQLPKVLESVFREIPNLVFEQQGPR-RLRVKLRSDALPALLELLK--GRAGYLHLSAI 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDM 119
VD+ + F++VYH S + + I + + S+ IY A +FER++ +M
Sbjct: 58 SCVDWPTLDE-FELVYHLWSYEVKNLVSAHIYIPKTPGRYISVYDIYTPAAFFERDIHEM 116
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHY 158
+G++FEG PDL + + P+ K F +V+ Y
Sbjct: 117 FGVYFEGCPDLEPFILTEWYGPPPMLKSFSTLDYVKETY 155
>gi|156598289|gb|ABU85406.1| NADH-plastoquinone oxidoreductase subunit J [Ginkgo biloba]
Length = 158
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
L + D S+ L F + C D + V + + +
Sbjct: 28 ILQIKYEDWASIAVALYV---YGFNYLRSQCAYDVAPGGSLASVYHLTKIQDNADQPEEV 84
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V V I+ AD+ ERE +DM GI E HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPRKDPRIPSVFRIWKSADFQERESYDMLGILHESHPRLKRILMPESWIGWPLRK 144
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 145 DYIAPHFYEIQ 155
>gi|119719987|ref|YP_920482.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermofilum
pendens Hrk 5]
gi|119525107|gb|ABL78479.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermofilum
pendens Hrk 5]
Length = 161
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR---LRVKIAVAEGKSVPS-IVGIYPG 108
F ++ + G+D+ +VVYH S + +R V++ + K V + ++P
Sbjct: 50 GFDHLASVEGIDWP-SKGVIEVVYHAESYEPEKRRFLFEVRVQLPREKPVTPSLFDVWPN 108
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDF 148
A + ERE W+M G+ FEGHP+LRR+L G+EG PLRKDF
Sbjct: 109 ALFMERETWEMLGVIFEGHPELRRLLLPPGWEGPPPLRKDF 149
>gi|154819513|gb|ABS88041.1| NADH dehydrogenase subunit J [Heliconia bihai]
gi|154819515|gb|ABS88042.1| NADH dehydrogenase subunit J [Heliconia caribaea]
Length = 127
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 3 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 57
Query: 86 RLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 58 EVCIKVFAPRNNPRIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 117
Query: 145 RKDF 148
RKD+
Sbjct: 118 RKDY 121
>gi|58578977|ref|YP_197189.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Welgevonden]
gi|58417603|emb|CAI26807.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Welgevonden]
Length = 100
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
N R+ K+++ E +++ SI I+ A WFERE +DMYGI F +PDLRRILTDYGF
Sbjct: 1 MIANNIRIFCKVSLHENENITSITNIFNAAGWFEREAFDMYGILFTNNPDLRRILTDYGF 60
Query: 140 EGHPLRKDFPVTGF 153
GH + P+ +
Sbjct: 61 SGHSMLNALPIYKY 74
>gi|307565984|ref|ZP_07628442.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
amnii CRIS 21A-A]
gi|307345172|gb|EFN90551.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
amnii CRIS 21A-A]
Length = 525
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 42 LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY--HFLSPKYNRRLRVKIAVAEGKSV 99
R F ++ + G DF + + LS + ++ + E +
Sbjct: 14 ALEMARLKNENHFDYLVTIVGEDFGQEEGLGCIYILENTLSHERISVKQIAKQIDEEHVI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF-EGHPLRKDFP 149
PS++ ++ A+ EREV+D +GI F GHPD+RR+ + G+PLRKDF
Sbjct: 74 PSVIKLWADAELLEREVYDFFGIKFLGHPDMRRLFLRNDYSNGYPLRKDFD 124
>gi|198279041|emb|CAP04554.1| NADH dehydrogenase subunit J [Conostylis glabra]
Length = 134
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 32 LDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRR 86
L + D +++ S++ + + C D V +
Sbjct: 5 LQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPEE 59
Query: 87 LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 60 VCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPCLKRILMPESWIGWPLR 119
Query: 146 KDFPVTGFVELH 157
KD+ F E+
Sbjct: 120 KDYITPDFYEIQ 131
>gi|213854926|ref|ZP_03383166.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 146
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 55/143 (38%), Gaps = 9/143 (6%)
Query: 3 RKI-EDLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
K+ + + +F G V A + +L++ V L + FL + L
Sbjct: 4 EKLGQQYLAALHQAFPGVVMDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---GWLSVL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVW 117
G D + V Y S + + + + V PS+ P A W EREV
Sbjct: 61 FGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWGEREVR 119
Query: 118 DMYGIFFEGHPDLRRILTDYGFE 140
DMYG+ G PD RR++ +
Sbjct: 120 DMYGLIPVGLPDERRLVLPDDWP 142
>gi|164453470|gb|ABY57494.1| NADH dehydrogenase subunit J [Triticum monococcum]
Length = 126
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D + V + + +K+ + V I+
Sbjct: 13 YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRIPSVFWIWR 72
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 73 SADFQERESYDMVGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 122
>gi|154819545|gb|ABS88057.1| NADH dehydrogenase subunit J [Opuntia fragilis]
Length = 127
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVIL---YAYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQAEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ AD+ ERE +DM GI+++ HP L+RIL + G PL K
Sbjct: 60 CIKVFAPRSNPRITSVFWVWKSADFQERESYDMLGIYYDNHPRLKRILMPESWIGWPLSK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|291191992|gb|ADD83069.1| hydrogenase 3 large subunit [Enterobacter cloacae]
Length = 480
Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 9/119 (7%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
V L + FL + L G D + V Y +S + + + + V
Sbjct: 2 VKVNYLPEVVEFLYYQQG---GWLSVLFGNDERQLCGNYAVYY-VMSMEQGEKCWLTVRV 57
Query: 94 AEGK---SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
PS+ P A W EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 58 EVDPNKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 116
>gi|171186233|ref|YP_001795152.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermoproteus
neutrophilus V24Sta]
gi|170935445|gb|ACB40706.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermoproteus
neutrophilus V24Sta]
Length = 177
Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 8 LGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L + + + ++ V G L L V G + + + L+ F +++ L +D++
Sbjct: 17 LLEKLRTALGDALLSHGVTPEGHLCLMVPPGKVREVAAKLK---ELGFDHVLSLSAMDYM 73
Query: 67 SRSNRFDVVYHFLSPKYNRR---LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
+ + + + + L V+ + + SI IYP AD+ ERE +M+GI
Sbjct: 74 AEGKFLVMYVYASYLNPDLKNQLLHVRAEIPRNDPKIASIADIYPSADYDERECHEMFGI 133
Query: 123 FFEGHPDL-RRILTDYG--------FEGHPLRKDF 148
+FEG+ + +R L D +PLRKDF
Sbjct: 134 WFEGNQHMGKRFLLDPDCCIDEKTGKPLYPLRKDF 168
>gi|154819557|gb|ABS88063.1| NADH dehydrogenase subunit J [Plantago rugelii]
Length = 127
Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVK 90
+ D S+ L + + C D V + + +K
Sbjct: 6 IKPEDWHSIAVILYV---YGYNYLRSXCAYDLAPGGLLASVYHLTRIESGVDQPEEVCIK 62
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
I + V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 63 IFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 121
>gi|198279045|emb|CAP04556.1| NADH dehydrogenase subunit J [Gymnadenia borealis]
Length = 119
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A+ PS+ I+
Sbjct: 7 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFALRSNPKTPSVFWIWR 66
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 67 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 116
>gi|170289765|ref|YP_001736581.1| NADH dehydrogenase subunit C [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173845|gb|ACB06898.1| NADH dehydrogenase subunit C [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 156
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
+IEDL I + G +V + + V +V + L+ F ++ + V
Sbjct: 2 RIEDLKIKIEDELKGIAEISVREPNVIDVKVSRDKIVEVAEKLK---RMGFDHVKSVTAV 58
Query: 64 DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA----EGKSVPSIVGIYPGADWFEREVWDM 119
D+ RF+VVY S + + + + + S++ ++P + E E D+
Sbjct: 59 DYP--GERFEVVYVASSYEASLSYFLVSLRTSLPYDDPRMSSLLSVWPSVLYQEHEEHDL 116
Query: 120 YGIFFEGHPDL-RRILTDYGFEG-HPLRKDFPVT 151
GI FEG+P + R+L +EG PLRK+F V
Sbjct: 117 MGIEFEGNPRMGERLLLPESYEGIPPLRKEFKVR 150
>gi|94265853|ref|ZP_01289583.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [delta
proteobacterium MLMS-1]
gi|93453589|gb|EAT03985.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [delta
proteobacterium MLMS-1]
Length = 96
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ + F+VVY F + R+ +++ V +P+I IYPGA+W ERE D +G+ F G
Sbjct: 13 QEDSFEVVYDFNHFQELCRVTLRVRVPRSLPQLPTISDIYPGANWHEREAHDFFGLVFTG 72
Query: 127 HPDLRRILTDYGFEGHPLRKDF 148
HPDL +L + HPLRKD+
Sbjct: 73 HPDLSPLLLPEDADFHPLRKDY 94
>gi|288932068|ref|YP_003436128.1| NADH-quinone oxidoreductase subunit beta [Ferroglobus placidus DSM
10642]
gi|288894316|gb|ADC65853.1| NADH-quinone oxidoreductase, B subunit [Ferroglobus placidus DSM
10642]
Length = 356
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+++ + + +++ + + V + F ++ + VD
Sbjct: 200 KEVVAKLSEILGELCEKIKITGKNRVAIRIKKDNFVEAA---KKMLEAGFDHVKSVNVVD 256
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAV----AEGKSVPSIVGIYPGADWFEREVWDMY 120
+ R + + PS++ ++P AD+ ERE+ +++
Sbjct: 257 VPHENKFIVEYVTSSYLNPEYRSILVTLISEIERSDPVFPSLIEVWPSADYLERELHELF 316
Query: 121 GIFFEGHPDL-RRILTDYGFEGHPLRKDFPVT 151
G++FEG+P + R+ L PLRKDF +
Sbjct: 317 GVWFEGNPWMGRKFLLAPDTPETPLRKDFKLQ 348
>gi|164512990|emb|CAP11588.1| NADH dehydrogenase subunit J [Lycopodium fastigiatum]
Length = 128
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + K
Sbjct: 10 TLQIKTKDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 68
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A PS+ I+ AD+ ERE +DM GIF+E HP L+RIL + G PLRKD+
Sbjct: 69 KVFAPRSNPRTPSVFWIWRSADFQERESYDMLGIFYENHPRLKRILMPESWIGWPLRKDY 128
>gi|84494891|ref|ZP_00994010.1| putative NADH dehydrogenase [Janibacter sp. HTCC2649]
gi|84384384|gb|EAQ00264.1| putative NADH dehydrogenase [Janibacter sp. HTCC2649]
Length = 177
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC-GVDFLSRSNRFDVVYHFLSPKYNRR 86
EL DV D + + F + + D + + +S + + R
Sbjct: 4 DELH-DVALADWHEAVAAAQATGFTFFDWLSAVDRTYDDAAPGYGLVLRALDISHETDGR 62
Query: 87 ----LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD-----LRRILTDY 137
+R+ VAEG ++ S+ +Y GA W ERE +M+G+ F G D +R +L
Sbjct: 63 GIRAIRLTTRVAEGAAIVSVTDVYAGAAWHERETHEMFGVEFTGFDDGSGSGMRPLLLPE 122
Query: 138 GFEGHPLRKDFPVT 151
GFEG PLRK F +
Sbjct: 123 GFEGTPLRKSFVLA 136
>gi|163311526|gb|ABY26725.1| NdhJ [Zea mays]
Length = 124
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D + V + + +K+ + V ++
Sbjct: 11 YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRIPSVFWVWR 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 71 SADFQERESYDMVGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 120
>gi|198279687|emb|CAP03342.1| NADH dehydrogenase subunit J [Conostylis juncea]
Length = 143
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ E E +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQECESYDMLGISYDNHPCLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 128 RKDYITPNFYEIQ 140
>gi|283852202|ref|ZP_06369475.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio sp.
FW1012B]
gi|283572428|gb|EFC20415.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio sp.
FW1012B]
Length = 182
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
LS+ + L + + D + D+ D ++V YH R+ +
Sbjct: 26 LSVTLAADTLRAAV-AVCDKEGY---LLEDVMASDLQE---GYEVAYHLSLLDGANRIVL 78
Query: 90 KIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
++ V VP+I IYPGADW ERE +D YGI F GHP+L +L HPLRK
Sbjct: 79 RLTVPHDAPEVPTISDIYPGADWHERECFDFYGIRFAGHPNLYFLLLPEDTTEHPLRK 136
>gi|198279033|emb|CAP04550.1| NADH dehydrogenase subunit J [Conostylis resinosa]
Length = 122
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYP 107
+ + C D V + + +K+ +PS+ I+
Sbjct: 10 YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPEEVCIKVFAKRNNPQIPSVFWIWR 69
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 70 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 119
>gi|164512960|emb|CAP11573.1| NADH dehydrogenase subunit J [Erica discolor]
Length = 125
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 9 TLQIKSEDWHSIAIILYV---YGYNYLRSQCAYDVAPGGQLASVYHLTRIEYGVDQPEEV 65
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 66 RIKVFAPRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 125
>gi|89257420|gb|ABD64912.1| NAD(P)H-quinone oxidoreductase chain J, putative [Brassica
oleracea]
Length = 158
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ D + D+ L+ + + ++ ++
Sbjct: 28 TLQIKPEDWHSIAVILYVYDYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEVSIK 87
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
V +PS+ ++ D+ ERE +DM GI ++ H L+RIL + G PLRKD+
Sbjct: 88 VFTH-RSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHTRLKRILMPEIWIGWPLRKDY 146
Query: 149 PVTGFVELH 157
F E+
Sbjct: 147 IAPNFYEIQ 155
>gi|164512958|emb|CAP11572.1| NADH dehydrogenase subunit J [Erica anguliger]
Length = 125
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 9 TLQIKSEDWHSIAIILYV---YGYNYLRSQCAYDLAPGGQLASVYHLTRIEYGVDQPEEV 65
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
R+K+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 66 RIKVFAPRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 125
>gi|151367628|gb|ABS10582.1| NADH dehydrogenase subunit J [Oxalis violacea]
Length = 127
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L V D S+ L + + C D V + +
Sbjct: 3 TLQVKPEDWHSIAVILYV---YGYNYLRSXCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V ++ AD+ ERE +DM GI ++ P L+RIL + G PLRK
Sbjct: 60 CIKVFAPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNXPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|126465552|ref|YP_001040661.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Staphylothermus
marinus F1]
gi|126014375|gb|ABN69753.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Staphylothermus
marinus F1]
Length = 184
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVG-----ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ + + + G + + ++ DL + ++D + + I +
Sbjct: 2 EIDKELIEKLPDKYKNSFSIEGTDTGKRIEITIEPQDLCKVLPAIKD---AGYDHFIGIT 58
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWF-EREVWDMY 120
+D+ + V K + + ++ + V ++ E E ++ +
Sbjct: 59 VIDYPDENVFELVYLIDSISKNGQLVAIRTKLPRDNPVIDTASFIYPLAYYQEIEAYEFF 118
Query: 121 GIFFEGHPDLRRILTDYGFEG-HPLRKD 147
G+ F H LR+ + + ++G P RKD
Sbjct: 119 GVRFNNHDGLRKWILEDNWQGPPPFRKD 146
>gi|164512976|emb|CAP11581.1| NADH dehydrogenase subunit J [Howea forsteriana]
Length = 110
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYP 107
+ + C D V + + +K+ V + S+ I+
Sbjct: 11 YGYNYLRSQCAYDVAPGGPLASVYHLTRIHYGVDQPEEVCIKVFVPRNNPRISSVFWIWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 71 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKD 110
>gi|164513026|emb|CAP11606.1| NADH dehydrogenase subunit J [Paeonia kavachensis]
gi|164513028|emb|CAP11607.1| NADH dehydrogenase subunit J [Paeonia tenuifolia]
Length = 124
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVK 90
+ D S+ L + + C D V + + +K
Sbjct: 10 IKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRLEYGVDQPEEVCIK 66
Query: 91 IAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+ +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 67 VFAPRRNPKIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKD 124
>gi|198279037|emb|CAP04552.1| NADH dehydrogenase subunit J [Conostylis dielsii subsp. teres]
Length = 129
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 34 VDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLR 88
+ D +++ S++ + + C D + V + +
Sbjct: 2 IKTEDWDSIAVISYV-----YGYNYLRSQCAYDVVPGGFLASVYHLTRIQYGIDKPEEVC 56
Query: 89 VKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 57 IKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKD 116
Query: 148 FPVTGFVELH 157
+ F E+
Sbjct: 117 YITPNFYEIQ 126
>gi|94272793|ref|ZP_01292186.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [delta
proteobacterium MLMS-1]
gi|93450009|gb|EAT01399.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [delta
proteobacterium MLMS-1]
Length = 71
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 81 PKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
R+ +++ V +P+I IYPGA+W ERE D +G+ F GHPDL +L
Sbjct: 1 ISGACRVTLRVRVPRSLPQLPTISDIYPGANWHEREAHDFFGLVFTGHPDLSPLLLPEDA 60
Query: 140 EGHPLRKDF 148
+ HPLRKD+
Sbjct: 61 DFHPLRKDY 69
>gi|20808126|ref|NP_623297.1| Ni,Fe-hydrogenase III large subunit [Thermoanaerobacter
tengcongensis MB4]
gi|254479095|ref|ZP_05092448.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Carboxydibrachium pacificum DSM 12653]
gi|20516713|gb|AAM24901.1| Ni,Fe-hydrogenase III large subunit [Thermoanaerobacter
tengcongensis MB4]
gi|214034977|gb|EEB75698.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Carboxydibrachium pacificum DSM 12653]
Length = 576
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 12/151 (7%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ + + F S+ +++L V L + + ++ G D
Sbjct: 12 KKYVRALYSKFGASILEEKWQTPDQVTLTVKLNILPEIVEEAYYGQG---GWLSNVIGND 68
Query: 65 FLSRSNRFDVVYHF-----LSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWD 118
S + F V Y P N L VK V K PS+ P A W+EREV D
Sbjct: 69 ERSINGHFAVYYVLSIEAEKDPDKNLWLTVKALVPADKPEFPSVAPRVPAAVWYEREVRD 128
Query: 119 MYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
M G+ G PD RR++ + +PLRKD
Sbjct: 129 MLGLEPVGLPDARRLVLPDDWPDNLYPLRKD 159
>gi|198279727|emb|CAP03362.1| NADH dehydrogenase subunit J [Conostylis aculeata subsp. aculeata]
Length = 143
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 13 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 67
Query: 86 RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 EVCIKVFAKRNNPQIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 127
Query: 145 RKDFPVTGFVELH 157
R D+ F E+
Sbjct: 128 RXDYITPNFYEIQ 140
>gi|332558530|ref|ZP_08412852.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodobacter sphaeroides WS8N]
gi|332276242|gb|EGJ21557.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodobacter sphaeroides WS8N]
Length = 580
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 1 MV--RKIEDLGDYIVNSFSGSVRFAVNSVGE--LSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M + I D + F +VR A + GE L +D + FLR++ F
Sbjct: 1 MSLDQAIPDALQALRTRFGAAVR-AEQATGEAFPVLWLDASVWEAAHRFLREEIAAPFPL 59
Query: 57 IIDLCGV-----DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADW 111
+ DL + + + R +++ +A PSI G+Y ADW
Sbjct: 60 LADLWAIDESLRQHRTGQPASRITLCSHLVSLVRNADLRLKLATDGRAPSIAGVYANADW 119
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ERE DM+G+ F G RRIL +EGHPL K
Sbjct: 120 YEREAHDMFGLDF-GRE-TRRILMPPTWEGHPLLKTH 154
>gi|198279035|emb|CAP04551.1| NADH dehydrogenase subunit J [Conostylis lepidospermoides]
Length = 127
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYP 107
+ + C D V + + +K+ +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPEEVCIKVFAKRNNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 75 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 124
>gi|282860264|ref|ZP_06269334.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
bivia JCVIHMP010]
gi|282586938|gb|EFB92173.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Prevotella
bivia JCVIHMP010]
Length = 525
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 43 CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI---AVAEGKSV 99
+ L+++ H F +I + G DF + +Y + + + R+ VK V E +
Sbjct: 17 MAKLKNEKH--FDYLITIVGEDF-GKEEGLGCIYILENTQTHERISVKQIAKQVGEEYVI 73
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF-EGHPLRKDFP 149
P+++ ++ AD EREV+D GI F GHPD+RR+ F G+PLRKDF
Sbjct: 74 PTVLNLWADADLLEREVYDFLGIKFLGHPDMRRLYLRNDFSNGYPLRKDFD 124
>gi|154819529|gb|ABS88049.1| NADH dehydrogenase subunit J [Lobelia cardinalis]
Length = 127
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ + D S+ + + C D V + +
Sbjct: 3 TFQIKAEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIKYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI + HP L+RIL + G PLRK
Sbjct: 60 CIKVFASRRDPRIPSVFWVWKSVDFQERESYDMVGISYVNHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|159797444|gb|ABX00230.1| NADH dehydrogenase subunit J [Crocus chrysanthus]
Length = 130
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
L + D +++ S++ + + C D V +
Sbjct: 6 ILQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGLLASVYHLTKIQYGIDKPE 60
Query: 86 RLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ V V I+ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 61 EVCIKVFVPRSNPRIPSVFWIWRSADFQERESYDMLGILYDNHPRLKRILMPESWIGWPL 120
Query: 145 RKDF 148
RKD+
Sbjct: 121 RKDY 124
>gi|159797450|gb|ABX00233.1| NADH dehydrogenase subunit J [Crocus kotschyanus subsp.
hakkariensis]
gi|159797454|gb|ABX00235.1| NADH dehydrogenase subunit J [Crocus karduchorum]
gi|159797456|gb|ABX00236.1| NADH dehydrogenase subunit J [Crocus nevadensis]
Length = 130
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ L+ + K
Sbjct: 6 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TKIQYGIDKPEEVCI 64
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GIF++ HP L+RIL + G PLRKD+
Sbjct: 65 KVFAPRSNPRIPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLRKDY 124
>gi|264684061|emb|CAP46282.1| NADH dehydrogenase [Inga punctata]
Length = 116
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLR 88
L + D S+ L + + C D V + +
Sbjct: 1 LQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVC 57
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 58 IKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 116
>gi|164512948|emb|CAP11567.1| NADH dehydrogenase subunit J [Ephedra andina]
Length = 129
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + K
Sbjct: 10 TLQIKNEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 68
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A PS+ I+ AD+ ERE +DM GIF+E HP L+RIL + G PL KD+
Sbjct: 69 KVFAPRSNPRTPSVFWIWRSADFQERESYDMLGIFYENHPRLKRILMPESWIGWPLLKDY 128
>gi|213621461|ref|ZP_03374244.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 330
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 9/119 (7%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
V L + FL + L G D + V Y S + + + + V
Sbjct: 1 VKVNYLPEVVEFLYYQQG---GWLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRV 56
Query: 94 AEGK---SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
PS+ P A W EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 57 EVDANKLEFPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 115
>gi|151367636|gb|ABS10586.1| NADH dehydrogenase subunit J [Tacca integrifolia]
Length = 127
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ FL+ + + + +
Sbjct: 3 TLQIKTEDWDSIAVISYIYGYNYLRSXCAYDVSPGGFLAS--VYHLTRIQYGIDKSEEVC 60
Query: 89 VKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+K+ V+ V I+ AD+ ERE +DM GI ++ H L+RIL + G PLRKD
Sbjct: 61 IKVFVSRNNPPIPSVFWIWKSADFQERESYDMLGISYDNHXRLKRILMPESWIGWPLRKD 120
Query: 148 F 148
+
Sbjct: 121 Y 121
>gi|126462506|ref|YP_001043620.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodobacter sphaeroides ATCC 17029]
gi|218528059|sp|A3PKI2|NUOCD_RHOS1 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|126104170|gb|ABN76848.1| NADH dehydrogenase I, D subunit [Rhodobacter sphaeroides ATCC
17029]
Length = 580
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 1 MV--RKIEDLGDYIVNSFSGSVRFAVNSVGE--LSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M + I + + F +VR A + GE L +D + FLR++ F
Sbjct: 1 MSLDQAIPEALQALRTRFGAAVR-AEQATGEAFPVLWLDASVWEAAHRFLREEIAAPFPL 59
Query: 57 IIDLCGV-----DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADW 111
+ DL + + + R +++ +A PSI G+Y ADW
Sbjct: 60 LADLWAIDESLRQHRTGQPASRITLCSHLVSLVRNADLRLKLATDGRAPSIAGVYANADW 119
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ERE DM+G+ F G RRIL +EGHPL K
Sbjct: 120 YEREAHDMFGLDF-GRE-TRRILMPPTWEGHPLLKTH 154
>gi|159797442|gb|ABX00229.1| NADH dehydrogenase subunit J [Crocus biflorus subsp. nubigena]
gi|159797446|gb|ABX00231.1| NADH dehydrogenase subunit J [Crocus carpetanus]
gi|159797448|gb|ABX00232.1| NADH dehydrogenase subunit J [Crocus speciosus subsp. speciosus]
gi|159797452|gb|ABX00234.1| NADH dehydrogenase subunit J [Crocus cancellatus subsp. lycius]
gi|159797458|gb|ABX00237.1| NADH dehydrogenase subunit J [Crocus pelistericus]
gi|159797460|gb|ABX00238.1| NADH dehydrogenase subunit J [Crocus scardicus]
Length = 130
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ L+ + K
Sbjct: 6 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TKIQYGIDKPEEVCI 64
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 65 KVFAPRSNPRIPSVFWIWRSADFQERESYDMLGILYDNHPRLKRILMPESWIGWPLRKDY 124
>gi|77463674|ref|YP_353178.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodobacter sphaeroides 2.4.1]
gi|123591709|sp|Q3J1Q7|NUOCD_RHOS4 RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|77388092|gb|ABA79277.1| NADH-ubiquinone oxidoreductase, chain 49kDa / NADH dehydrogenase
(ubiquinone), 30 kDa subunit [Rhodobacter sphaeroides
2.4.1]
Length = 580
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 1 MV--RKIEDLGDYIVNSFSGSVRFAVNSVGE--LSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M + I + + F +VR A + GE L +D + FLR++ F
Sbjct: 1 MSLDQAIPEALQALRTRFGAAVR-AEQATGEAFPVLWLDASVWEAAHRFLREEIAAPFPL 59
Query: 57 IIDLCGV-----DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADW 111
+ DL + + + R +++ +A PSI G+Y ADW
Sbjct: 60 LADLWAIDESLRQHRTGQPASRITLCSHLVSLVRNADLRLKLATDGRAPSIAGVYANADW 119
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ERE DM+G+ F G RRIL +EGHPL K
Sbjct: 120 YEREAHDMFGLDF-GRE-TRRILMPPTWEGHPLLKTH 154
>gi|151367614|gb|ABS10575.1| NADH dehydrogenase subunit J [Ambrosia artemisiifolia]
Length = 127
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + D+ L+ + +
Sbjct: 3 TLQIKPEDWHSIAVIFYIYGYNYLRXXXAYDVAPGGLLAXVYHL-TRIEYGVDQPEEVCI 61
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ + +PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 62 KVFSPRKNPRIPSVFWVWKSVDFQERESFDMLGISYDNHPRLKRILMPESWIGWPLRKDY 121
>gi|50660000|gb|AAT80722.1| NADH-plastoquinone oxidoreductase subunit J [Huperzia lucidula]
Length = 172
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ C D V + L
Sbjct: 42 TLQIKSRDWPSVAVA---PYAYGSNYPRSQCAYDVAPGGALVSVYHLTRIQDDLDQPEEL 98
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 99 CIKVFVPREDPKIPSVFWIWKSADFQERESYDMSGITYENHPHLKRILMPDTWIGWPLRK 158
Query: 147 DF 148
D+
Sbjct: 159 DY 160
>gi|221639517|ref|YP_002525779.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D
[Rhodobacter sphaeroides KD131]
gi|254767806|sp|B9KJI1|NUOCD_RHOSK RecName: Full=NADH-quinone oxidoreductase subunit C/D; AltName:
Full=NADH dehydrogenase I subunit C/D; AltName:
Full=NDH-1 subunit C/D
gi|221160298|gb|ACM01278.1| NADH dehydrogenase I, D subunit [Rhodobacter sphaeroides KD131]
Length = 580
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 1 MV--RKIEDLGDYIVNSFSGSVRFAVNSVGE--LSLDVDCGDLVSLCSFLRDDPHCCFVN 56
M + I + + F +VR A + GE L +D + FLR++ F
Sbjct: 1 MSLDQAIPEALQALRTRFGAAVR-AEQATGEAFPVLWLDASVWEAAHRFLREEIAAPFPL 59
Query: 57 IIDLCGV-----DFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADW 111
+ DL + + + R +++ +A PSI G+Y ADW
Sbjct: 60 LADLWAIDESLRQHRTGQPASRITLCSHLVSLVRNADLRLKLATDGRAPSIAGVYANADW 119
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ERE DM+G+ F G RRIL +EGHPL K
Sbjct: 120 YEREAHDMFGLDF-GRE-TRRILMPPTWEGHPLLKTH 154
>gi|164513034|emb|CAP11610.1| NADH dehydrogenase subunit J [Plantago lanceolata]
Length = 115
Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 36 CGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIA 92
D S+ L + + C D V + + +KI
Sbjct: 1 PEDWHSIAVILYV---YGYNYLRSQCAYDLAPGGLLASVYHLTRIESGVDQPEEVCIKIF 57
Query: 93 VAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 58 ASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 114
>gi|264684051|emb|CAP46277.1| NADH dehydrogenase [Inga sapindoides]
Length = 126
Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + F D+ L+ + + +
Sbjct: 11 TLQIKPEDWHSIAVILYVYGYNYLRFQCAYDVAPGGLLAS--VYHLTRIEYGIDQPEEVC 68
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 69 IKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 126
>gi|154819531|gb|ABS88050.1| NADH dehydrogenase subunit J [Lobelia inflata]
Length = 127
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ + D S+ + + C D V + +
Sbjct: 3 TFQIKSEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIKYGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM GI + HP L+RIL + G PLRK
Sbjct: 60 CIKVFASRRDPRIPSVFWVWKSVDFQERESYDMVGISYANHPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|301167469|emb|CBW27052.1| putative NADH dehydrogenase I chain C/D [Bacteriovorax marinus SJ]
Length = 536
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN---RFDVVYHFLSPKYNRRLRVKI 91
+ DL S L+ F+ ++D+ +D + N RF + Y L+ + + RL+V +
Sbjct: 28 ESKDLKSTLKKLK--ETFGFIMLLDIIAIDNSKKENATKRFQLSYFLLNMEEHFRLQVIL 85
Query: 92 AVAEGK--SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR-RILTDYGFEGHPLRKDF 148
+ +PS I+ A W ERE+W+M+GI F PD R+LT G PLRKDF
Sbjct: 86 NFDNDRQEILPSASDIWTNAHWCEREIWEMFGISFG--PDSEHRLLTPKEIIGFPLRKDF 143
Query: 149 PV 150
+
Sbjct: 144 QL 145
>gi|164513036|emb|CAP11611.1| NADH dehydrogenase subunit J [Plantago major]
Length = 115
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 36 CGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKI 91
D S+ L + + C D V + + + +
Sbjct: 1 PEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLSSVYHLTRLEYGADQPEEVCIKVF 57
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 58 APRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDY 114
>gi|169835448|gb|ACA96875.1| NADH dehydrogenase subunit J [Blumea napifolia]
gi|169835450|gb|ACA96876.1| NADH dehydrogenase subunit J [Blumea paniculata]
Length = 129
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 7/127 (5%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
GD S+ L + + C D V + + +K+
Sbjct: 3 KPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKV 59
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 60 FAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIA 119
Query: 151 TGFVELH 157
F E+
Sbjct: 120 PNFYEIQ 126
>gi|14601399|ref|NP_147935.1| NuoC-like protein [Aeropyrum pernix K1]
gi|5105109|dbj|BAA80423.1| NuoC homolog [Aeropyrum pernix K1]
Length = 189
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP-- 81
+ G + V DLV L+ F +++ + +D+L + +F VVYH S
Sbjct: 44 EDGKGFVDFIVSVDDLVRAAEALKT---VGFDHVVSITTIDYL-KEKKFRVVYHVSSYLD 99
Query: 82 ----KYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI-LTD 136
L V++ E S+PS+ I+ A++ EREV++ +GI FEGHPDLR LT
Sbjct: 100 AALKGAIVGLGVELPRVEKPSIPSLSQIWISAEFQEREVYEFFGIEFEGHPDLRPFLLTP 159
Query: 137 YGFEGHPLRKDF 148
E PLRKDF
Sbjct: 160 PVAEKRPLRKDF 171
>gi|264684041|emb|CAP46272.1| NADH dehydrogenase [Inga umbellifera]
Length = 128
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ ++ + F D+ L+ + + +
Sbjct: 13 TLQIKPEDWHSIAVILYVYGYNYLRFQCAYDVAPGGLLAS--VYHLTRIEYGIDQPEEVC 70
Query: 89 VKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 71 IKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 128
>gi|309274585|gb|ADO64202.1| ndhJ [Drimia polyantha]
Length = 128
Score = 74.6 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVK 90
+ D S+ L + + C D V + + VK
Sbjct: 1 IKTEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCVK 57
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 58 VFAPRINPRIPSVFWIWRSADFQERESYDMLGISYDNHPRLKRILMSESWIGWPLRKDYI 117
Query: 150 VTGFVELH 157
F E+
Sbjct: 118 TPNFYEIQ 125
>gi|255565794|ref|XP_002523886.1| NADH-ubiquinone oxidoreductase I subunit j, putative [Ricinus
communis]
gi|223536816|gb|EEF38455.1| NADH-ubiquinone oxidoreductase I subunit j, putative [Ricinus
communis]
Length = 188
Score = 74.6 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 5/128 (3%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY----NRRLRVK 90
++ + LR + S VYH +Y + +K
Sbjct: 58 KPEAVIDAITKLRKKLSREIYEDRIRSQPENRSSGGLLASVYHLTRIEYGIDQPEEVCIK 117
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
+ V ++ AD+ ERE +DM GI ++ HP ++RIL + G PLRKD+
Sbjct: 118 VFAPRKNPRIPSVFWVWKSADFQERESYDMLGILYDNHPRMKRILMPESWIGWPLRKDYI 177
Query: 150 VTGFVELH 157
F E+
Sbjct: 178 APNFYEIQ 185
>gi|151367622|gb|ABS10579.1| NADH dehydrogenase subunit J [Datura metel]
Length = 127
Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRL 87
+L + D S+ + + C D V + +
Sbjct: 3 TLQIKPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEV 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V ++ D+ ERE +DM+GI ++ P L+RIL + G PLRK
Sbjct: 60 CIKVFASRRNPRIPSVFWVWKSVDFQERESYDMFGISYDNXPRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|332157668|ref|YP_004422947.1| hypothetical protein PNA2_0025 [Pyrococcus sp. NA2]
gi|331033131|gb|AEC50943.1| hypothetical protein PNA2_0025 [Pyrococcus sp. NA2]
Length = 174
Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 8/153 (5%)
Query: 1 MVRKIEDLGDYIVNSFSG---SVRFAVNSVGELSLDVDCGDLVSLCSFLRD-DPHCCFVN 56
M K E + + I + F +V+ + ++V FL++ D +
Sbjct: 1 MGEKEEIVLNAIRDRFPDVEVNVKENKWGRKRIWVNVPREKFREFIKFLKELDEDAHYSI 60
Query: 57 IIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREV 116
I+ + L + + + + ++P I I+P + FERE
Sbjct: 61 GIEEDAGETLDF--SIHFLLFYDTSPGVSMIVKTSVPKNDPTLPDISDIFPISLQFEREA 118
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
+M GI F+G PD RR+ F +PLR D
Sbjct: 119 MEMVGIDFKGAPDKRRLFLPDDFPEGIYPLRHD 151
>gi|326628901|gb|EGE35244.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 561
Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 57/155 (36%), Gaps = 20/155 (12%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
E EV DMYG+ G PD D+ E +PLRKD
Sbjct: 115 ESEVRDMYGLIPVGLPD------DWPDELYPLRKD 143
>gi|205353793|ref|YP_002227594.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205273574|emb|CAR38561.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
Length = 561
Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 57/155 (36%), Gaps = 20/155 (12%)
Query: 1 MVRKIEDLGD----YIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E LG + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWF 112
+ L G D + V Y S + + + + V PS+ P A W
Sbjct: 56 WLSVLFGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWG 114
Query: 113 EREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
E EV DMYG+ G PD D+ E +PLRKD
Sbjct: 115 ESEVRDMYGLIPVGLPD------DWPDELYPLRKD 143
>gi|315230911|ref|YP_004071347.1| Ni-Fe-hydrogenase III large subunit [Thermococcus barophilus MP]
gi|315183939|gb|ADT84124.1| Ni-Fe-hydrogenase III large subunit [Thermococcus barophilus MP]
Length = 537
Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 45 FLRDDPHCCFVN-IIDLCGVDFLSRS-NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI 102
LR F GV R +YH + + +R + VA +PSI
Sbjct: 29 KLRTTAELLFKAGCYYATGVGVDERLLGVGFSMYHIFNCESEKRYVILKTVANNSKIPSI 88
Query: 103 VGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDF 148
I GA+W ERE DM GIFF+ HP+ R++ + HPLRK+F
Sbjct: 89 TPIISGANWAEREAMDMVGIFFDEHPEPLRLILPDDWPEGVHPLRKEF 136
>gi|323148909|ref|YP_004222464.1| NADH-plastoquinone oxidoreductase subunit J [Smilax china]
gi|308742600|gb|ADO33451.1| NADH-plastoquinone oxidoreductase subunit J [Smilax china]
Length = 158
Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNR 85
+L + D +++ S++ + + C D V +
Sbjct: 28 TLQIKTEDWDSIAVISYV-----YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPE 82
Query: 86 RLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ +K+ V V I+ AD+ ERE +DM GI + HP L+RIL + G P
Sbjct: 83 EVCIKVFVPRSNPRIPSVFWIWRSADFQERESYDMLGISYNNHPRLKRILMPESWMGWPS 142
Query: 145 RKDFPVTGFVELH 157
RKD+ F E+
Sbjct: 143 RKDYITPNFYEIQ 155
>gi|307299703|ref|ZP_07579497.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermotogales
bacterium mesG1.Ag.4.2]
gi|306914630|gb|EFN45022.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermotogales
bacterium mesG1.Ag.4.2]
Length = 171
Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M + ++ I S + E + V+ L ++ L+ F ++ +
Sbjct: 4 MNEILGEV-TTIAGELSVK----EVTARESIVSVEASRLNAVLELLKRR---GFSHLSLI 55
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDM 119
GVD + + F+V Y + L VK +++ + V S V ++P A ++ER+V +
Sbjct: 56 TGVDRI-KDGIFEVFYTLFRWETGETLLVKSSISRDEPVISTVMHLWPTARFYERDVHEF 114
Query: 120 YGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
+GI F+G+PDL+ ++ + E P+RKDF +
Sbjct: 115 FGIVFDGNPDLKPLILENWKEMPPMRKDFDPQKY 148
>gi|164453458|gb|ABY57488.1| NADH dehydrogenase subunit J [Glycine max]
Length = 124
Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPS-IVGIYP 107
+ + C D V + + +KI VA I ++
Sbjct: 12 YGYNYLRSQCAYDVAPGGLLASVYHLTRLEYGIDQPEEVCIKIFVARKNPRIPSIFWVWK 71
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ E+E +DM GI ++ HP LRRIL + G PLRKD+ F E+
Sbjct: 72 SADFQEKESYDMLGISYDNHPRLRRILMPESWIGWPLRKDYIAPNFYEIQ 121
>gi|171189231|gb|ACB42099.1| NADH dehydrogenase subunit J [Sophronitis fidelensis]
Length = 143
Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A +PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQIPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|171189175|gb|ACB42077.1| NADH dehydrogenase subunit J [Cattleya lawrenceana]
Length = 143
Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
A + ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SAYFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|171189198|gb|ACB42087.1| NADH dehydrogenase subunit J [Cattleya tigrina]
Length = 129
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 17 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 76
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 77 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 126
>gi|171189154|gb|ACB42067.1| NADH dehydrogenase subunit J [Cattleya elongata]
Length = 122
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 10 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 69
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 70 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 119
>gi|171189142|gb|ACB42061.1| NADH dehydrogenase subunit J [Cattleya bicolor]
Length = 143
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|171189239|gb|ACB42102.1| NADH dehydrogenase subunit J [Sophronitis mantiqueirae]
Length = 142
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|296242761|ref|YP_003650248.1| NADH dehydrogenase 30 kDa subunit [Thermosphaera aggregans DSM
11486]
gi|296095345|gb|ADG91296.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermosphaera
aggregans DSM 11486]
Length = 339
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
V+ L ++ L+D F +I++ VD+ ++ Y +P + VK
Sbjct: 209 VEKERLRTVLKELKDQ---GFSLLININAVDYPE-KGVIELYYVLENPGTGEQKWVKTFT 264
Query: 94 AEGKSVPSIVGIYPGADWF-EREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
+ V + EREV++M G+ F HP LR+ + + +EG PLRKD
Sbjct: 265 QRLSPIVDSVHDIYPLALYIEREVYEMMGVEFRNHPSLRKWILEGNWEGPPPLRKDVDTV 324
Query: 152 GFV 154
GFV
Sbjct: 325 GFV 327
>gi|164513040|emb|CAP11613.1| NADH dehydrogenase subunit J [Populus tremula]
Length = 116
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRV 89
+ D S+ L + + C D + + + + +
Sbjct: 2 IKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASIYHLTRIEYGILDQPEEVCI 58
Query: 90 KIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 59 KVFAPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 116
>gi|171189214|gb|ACB42095.1| NADH dehydrogenase subunit J [Sophronitis alaorii]
Length = 143
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|239618413|ref|YP_002941735.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Kosmotoga olearia
TBF 19.5.1]
gi|239507244|gb|ACR80731.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Kosmotoga olearia
TBF 19.5.1]
Length = 171
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+ + +L + N F ++ + + ++D D DL+S+ + + ++ +
Sbjct: 1 MNSMNELIKEVENLFGT-IKLNQIAERKYTVDTDLKDLISILELFKLK---GWNHLSLIS 56
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMY 120
VD++ N+F+++Y + + L V ++ V V G++P A ++ER++ + +
Sbjct: 57 CVDWID-DNQFELIYTLFNWENGITLMVSTKISRETPVAPTVMGLWPTARFYERDIHEFF 115
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
G+ F+G+ D++ ++ + + P+RKDF
Sbjct: 116 GVKFDGNDDMKPLILENWKDIPPMRKDFD 144
>gi|307595389|ref|YP_003901706.1| NADH-quinone oxidoreductase subunit B [Vulcanisaeta distributa DSM
14429]
gi|307550590|gb|ADN50655.1| NADH-quinone oxidoreductase, B subunit [Vulcanisaeta distributa DSM
14429]
Length = 420
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 20/155 (12%)
Query: 10 DYIVNSF-------SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ I N + + + + +D + L L F ++ +
Sbjct: 197 ELINNQLMPALKESAKKIIVTDINR--ICVDTEPNKLRDAALSL---SKLGFDHVKSVNV 251
Query: 63 VDFLSRSNRFDVVYHFLSPK----YNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVW 117
+D N+F V Y S + + + ++ I+P AD+ ERE++
Sbjct: 252 IDVP-HENKFYVEYWVSSYSKKELMPILISLTTEIPRDNPRVPSLMDIWPSADYMEREMY 310
Query: 118 DMYGIFFEGHPDL-RRILTDYG-FEGHPLRKDFPV 150
D +G++FEG+P + R L D PLRKD P+
Sbjct: 311 DFFGVWFEGNPWMGRNFLLDPDTPVKFPLRKDVPI 345
>gi|127707432|ref|YP_209526.2| NADH dehydrogenase subunit J [Huperzia lucidula]
Length = 159
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ C D V + L
Sbjct: 28 TLQIKSRDWPSVAVA---PYAYGSNYPRSQCAYDVAPGGALVSVYHLTRIQDDLDQPEEL 84
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 85 CIKVFVPREDPKIPSVFWIWKSADFQERESYDMSGITYENHPHLKRILMPDTWIGWPLRK 144
Query: 147 DF 148
D+
Sbjct: 145 DY 146
>gi|171189144|gb|ACB42062.1| NADH dehydrogenase subunit J [Cattleya bicolor]
gi|171189150|gb|ACB42065.1| NADH dehydrogenase subunit J [Cattleya dormaniana]
gi|171189158|gb|ACB42069.1| NADH dehydrogenase subunit J [Cattleya granulosa]
gi|171189196|gb|ACB42086.1| NADH dehydrogenase subunit J [Cattleya tenuis]
gi|171189202|gb|ACB42089.1| NADH dehydrogenase subunit J [Cattleya velutina]
gi|171189204|gb|ACB42090.1| NADH dehydrogenase subunit J [Cattleya violacea]
Length = 143
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|207110379|ref|ZP_03244541.1| NADH dehydrogenase subunit C [Helicobacter pylori HPKX_438_CA4C1]
Length = 108
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF----LSPKYNRR 86
+ D+ S+ + LR + + ++ +D ++ F++ Y F S K RR
Sbjct: 2 VFWIKKDDIFSVATTLRH---LGYECLSEMSAIDLCAKKGHFELFYQFVGFSDSCKNRRR 58
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+RVK + +SV S+ +Y A+W ERE +DM GI F+ HP L+R++
Sbjct: 59 VRVKCVLLPNESVDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIMP 108
>gi|319790465|ref|YP_004152098.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermovibrio
ammonificans HB-1]
gi|317114967|gb|ADU97457.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermovibrio
ammonificans HB-1]
Length = 155
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 7/151 (4%)
Query: 5 IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+E++ + F + L + D L L FL+ + F + VD
Sbjct: 2 LEEVKAKLEQQFGFECEPYDTNF--LLVKADRDKLRDLMKFLKKE---GFNYPHTVSVVD 56
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIF 123
+ + + V Y + + V++ + + I+P ERE W+M+G+
Sbjct: 57 YTPKGQGYQVNYILEDLVKKKFVMVRVELPADDLSVPSVCDIFPPLQPHEREAWEMFGVD 116
Query: 124 FEGHPDLRRILTDYGFEG-HPLRKDFPVTGF 153
F G+P L +L EG PLRK +
Sbjct: 117 FIGNPRLEVMLLPEWAEGWFPLRKSYDFKKH 147
>gi|171189206|gb|ACB42091.1| NADH dehydrogenase subunit J [Cattleya walkeriana]
Length = 129
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + LC D V + + K A PS+ I+
Sbjct: 17 YGYNYLRSLCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 76
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 77 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 126
>gi|294674398|ref|YP_003575014.1| proton-translocating NADH-quinone oxidoreductase D subunit
[Prevotella ruminicola 23]
gi|294471795|gb|ADE81184.1| putative proton-translocating NADH-quinone oxidoreductase, D
subunit [Prevotella ruminicola 23]
Length = 521
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVP--SIVGIYPGAD 110
F ++ + G DF V + + R ++A + + ++ I+ AD
Sbjct: 25 GFDYLVTIVGEDFGGEEGLGCVYILENTNTHERCAVKQLAQTQNDTPYIPTVSDIWKVAD 84
Query: 111 WFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
EREV+D +GI F GH D+RR+ F+GHP RKD
Sbjct: 85 LLEREVYDFFGIVFLGHKDMRRLFLRTDFKGHPFRKD 121
>gi|212224743|ref|YP_002307979.1| membrane bound hydrogenase, NiFe-hydrogenase large subunit 1
[Thermococcus onnurineus NA1]
gi|212009700|gb|ACJ17082.1| membrane bound hydrogenase, NiFe-hydrogenase large subunit 1
[Thermococcus onnurineus NA1]
Length = 189
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 10/149 (6%)
Query: 6 EDLGDYIVNSFSGS---VRFAVNSVGELSLDVDCGDLVSLCSFLRD-DPHCCFVNIIDLC 61
+ + + I + F + +R + + V D +L FL + DP + I+
Sbjct: 21 DTVAETIKSRFPNAHVEIRENKWGRKRVWVIVPREDYKALMKFLLELDPEAHYSIGIEQ- 79
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMY 120
D+ + L V + V + V I I+P A +ERE +M
Sbjct: 80 --DYGEEIGYMSHILLHYDNAPAVSLLVDVRVPKDDPVIPDISDIFPIALQYEREAAEMM 137
Query: 121 GIFFEGHPDLRRILTDYGFEG--HPLRKD 147
GI FEG PD RR+ F +PLR D
Sbjct: 138 GIVFEGIPDSRRLFLPDDFPEGIYPLRLD 166
>gi|164513038|emb|CAP11612.1| NADH dehydrogenase subunit J [Populus alba]
Length = 116
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRV 89
+ D S+ L + + C D + + + + +
Sbjct: 2 IKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASIYHLTRIEYGIVDQPEEVCI 58
Query: 90 KIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
K+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 59 KVFAPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 116
>gi|14591228|ref|NP_143305.1| hypothetical protein PH1435 [Pyrococcus horikoshii OT3]
gi|3257859|dbj|BAA30542.1| 174aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 174
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 8/153 (5%)
Query: 1 MVRKIEDLGDYIVNSFSG---SVRFAVNSVGELSLDVDCGDLVSLCSFLRD-DPHCCFVN 56
M K E + + I F V+ + V L FL++ DP +
Sbjct: 1 MKDKEEIIVNEISKRFPDVEIQVKENKWGRRRIWAKVPREKLRDFMKFLKELDPDAHYSI 60
Query: 57 IIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREV 116
I+ + L + + + A + +P I I+P + FERE
Sbjct: 61 GIEEDAGETLDF--SIHFLLLYDEAPGVSMIVKTSAPKDDPVLPDISDIFPISLQFEREA 118
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
+M GI FE PD RR+ F +PLR D
Sbjct: 119 MEMVGIDFENAPDKRRLFLPDDFPEGIYPLRHD 151
>gi|171189228|gb|ACB42098.1| NADH dehydrogenase subunit J [Sophronitis dayana]
gi|171189241|gb|ACB42103.1| NADH dehydrogenase subunit J [Sophronitis perrinii]
gi|171189244|gb|ACB42104.1| NADH dehydrogenase subunit J [Sophronitis praestans]
gi|171189249|gb|ACB42106.1| NADH dehydrogenase subunit J [Sophronitis sincorana]
gi|171189254|gb|ACB42108.1| NADH dehydrogenase subunit J [Sophronitis wittigiana]
Length = 143
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|164512944|emb|CAP11565.1| NADH dehydrogenase subunit J [Diospyros bejaudii]
Length = 111
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V I+
Sbjct: 11 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPRTPSVFWIWR 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
AD+ ERE +DM GIF+E HP L+RIL + G PLRKD+
Sbjct: 71 SADFQERESYDMLGIFYENHPRLKRILMPESWIGWPLRKDY 111
>gi|164512904|emb|CAP11545.1| NADH dehydrogenase subunit J [Babiana melanops]
Length = 113
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 37 GDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAV 93
D S+ L + + C D V + + +K+
Sbjct: 1 EDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIESGVDQPEEVCIKVFA 57
Query: 94 AEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 58 SRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 113
>gi|164453462|gb|ABY57490.1| NADH dehydrogenase subunit J [Arabidopsis thaliana]
Length = 125
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
Query: 37 GDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAV 93
D S+ L + + C D V + + +K+
Sbjct: 1 EDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEVCIKVFT 57
Query: 94 AEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 58 HRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRKDYIAPN 117
Query: 153 FVELH 157
F E+
Sbjct: 118 FYEIQ 122
>gi|171189191|gb|ACB42084.1| NADH dehydrogenase subunit J [Cattleya schilleriana]
Length = 129
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 17 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 76
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
A + ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 77 SAYFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 126
>gi|164453468|gb|ABY57493.1| NADH dehydrogenase subunit J [Nicotiana tabacum]
Length = 123
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ + V ++
Sbjct: 14 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKVFASRRNPRIPSVFWVWK 73
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
D+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 74 SVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQ 123
>gi|164453466|gb|ABY57492.1| NADH dehydrogenase subunit J [Solanum tuberosum]
Length = 126
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 7/126 (5%)
Query: 36 CGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIA 92
D S+ + + C D V + L +K+
Sbjct: 1 PEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDDVDQPEELCIKVF 57
Query: 93 VAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVT 151
+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 58 ASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAP 117
Query: 152 GFVELH 157
F E+
Sbjct: 118 NFYEIQ 123
>gi|171189246|gb|ACB42105.1| NADH dehydrogenase subunit J [Sophronitis pumila]
Length = 121
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 12 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 71
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ F E+
Sbjct: 72 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 121
>gi|171189148|gb|ACB42064.1| NADH dehydrogenase subunit J [Cattleya candida]
Length = 122
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 10 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 69
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 70 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 119
>gi|171189237|gb|ACB42101.1| NADH dehydrogenase subunit J [Sophronitis lundii]
Length = 143
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVV----YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYRLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|171189152|gb|ACB42066.1| NADH dehydrogenase subunit J [Cattleya dowiana]
Length = 142
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|57642025|ref|YP_184503.1| membrane bound hydrogenase, NiFe-hydrogenase large subunit 1
[Thermococcus kodakarensis KOD1]
gi|57160349|dbj|BAD86279.1| membrane bound hydrogenase, NiFe-hydrogenase large subunit 1
[Thermococcus kodakarensis KOD1]
Length = 189
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Query: 3 RKIEDLGDYIVNSFSGS---VRFAVNSVGELSLDVDCGDLVSLCSFLRD-DPHCCFVNII 58
K ED+ I F + V+ + + V D +L SF++ DP + I
Sbjct: 17 TKAEDVARKIAERFPSASVEVKTNKWGRQRVWVRVPREDYKALMSFIKGLDPEAHYSIGI 76
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVW 117
+ D+ + L V + + V P I ++P A FERE
Sbjct: 77 EQ---DWGEELGFLSHILIHYRDAPAVSLIVDVHAPKDDPVLPDISDVFPIALQFEREGM 133
Query: 118 DMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
+M G+ FEG PD RR+ F +PLR D
Sbjct: 134 EMVGLDFEGAPDKRRLFLPDDFPEGIYPLRLD 165
>gi|171189156|gb|ACB42068.1| NADH dehydrogenase subunit J [Cattleya forbesii]
gi|171189160|gb|ACB42070.1| NADH dehydrogenase subunit J [Cattleya guttata]
gi|171189162|gb|ACB42071.1| NADH dehydrogenase subunit J [Cattleya harrisoniana]
gi|171189164|gb|ACB42072.1| NADH dehydrogenase subunit J [Cattleya intermedia]
gi|171189177|gb|ACB42078.1| NADH dehydrogenase subunit J [Cattleya loddigesii]
gi|171189188|gb|ACB42083.1| NADH dehydrogenase subunit J [Cattleya porphyroglossa]
Length = 129
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 17 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 76
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 77 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 126
>gi|171189235|gb|ACB42100.1| NADH dehydrogenase subunit J [Sophronitis harpophylla]
Length = 143
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGEFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|308275205|emb|CBX31802.1| hypothetical protein N47_N26270 [uncultured Desulfobacterium sp.]
Length = 148
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 48/109 (44%)
Query: 47 RDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIY 106
R + V ++ + N R+ V+I V + + +I +Y
Sbjct: 33 RVAKEMRSRRFNLETVTAVDFIDSFEIVYLYYSYNQDNIRVMVRIRVPKDEPPFTISAVY 92
Query: 107 PGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
A W EREV+D +GI F+ HPDLRRIL + PL K+F T E
Sbjct: 93 SEAIWLEREVYDFFGIQFKEHPDLRRILNPDDADYFPLLKNFGKTTITE 141
>gi|171189184|gb|ACB42081.1| NADH dehydrogenase subunit J [Cattleya nobilior]
Length = 129
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 17 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKSEEVCIKGFAPRSNPQTPSVFWIWR 76
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 77 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 126
>gi|171189140|gb|ACB42060.1| NADH dehydrogenase subunit J [Cattleya aurea]
gi|171189166|gb|ACB42073.1| NADH dehydrogenase subunit J [Cattleya iricolor]
gi|171189179|gb|ACB42079.1| NADH dehydrogenase subunit J [Cattleya lueddemanniana]
gi|171189194|gb|ACB42085.1| NADH dehydrogenase subunit J [Cattleya schroederiana]
gi|171189212|gb|ACB42094.1| NADH dehydrogenase subunit J [Cattleya warscewiczii]
Length = 143
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|166092842|gb|ABY82373.1| NADH dehydrogenase subunit J [Silene uniflora]
Length = 107
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
+PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F
Sbjct: 41 RSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNF 100
Query: 154 VELH 157
E+
Sbjct: 101 YEIQ 104
>gi|151367616|gb|ABS10576.1| NADH dehydrogenase subunit J [Calamagrostis erectifolia]
Length = 118
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V ++
Sbjct: 12 YGYNYLRSXCAYDVAPGGLLASVYHLTRIEYGVDQAEEVCIKVFAPRNNPRIPSVFWVWK 71
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 72 SADFQERESYDMLGIRYDNHPRLKRILMPESWIGWPLRKDY 112
>gi|57641151|ref|YP_183629.1| NADH dehydrogenase subunit C [Thermococcus kodakarensis KOD1]
gi|57159475|dbj|BAD85405.1| membrane bound hydrogenase, NiFe-hydrogenase large subunit 1
[Thermococcus kodakarensis KOD1]
Length = 177
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Query: 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L ++ V + V + + F ++ + VD+L
Sbjct: 14 KLVKALLEKAP-YAEGEVIRERRIKFIVPADRIHEFLELASE----KFEMLMQISVVDWL 68
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ +F+V Y S + VK V + +P+++ I+P A+ +ERE + +GI FE
Sbjct: 69 -KEGQFEVNYQLWSVSESVHAFVKTRVPRDEAKLPTVMDIWPVAETYEREAHEFFGIIFE 127
Query: 126 GHPDLRRILT-DYGFEGHPLRKDFPVTGFVELHYDDKVKK 164
G+P L + +E HPLRKDF + +V+ Y + +
Sbjct: 128 GNPRLGPFILEPREYEKHPLRKDFNMLSYVKEIYGEDFDR 167
>gi|171189219|gb|ACB42096.1| NADH dehydrogenase subunit J [Sophronitis brevipedunculata]
Length = 125
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 13 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 72
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI++E HP L+RIL + G PLRKD+ F E+
Sbjct: 73 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 122
>gi|14520930|ref|NP_126405.1| hydrogenase related, subunit [Pyrococcus abyssi GE5]
gi|5458147|emb|CAB49636.1| NADH dehydrogenase, 30 kD subunit [Pyrococcus abyssi GE5]
Length = 175
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 9/154 (5%)
Query: 1 MVRKIED-LGDYIVNSFSG---SVRFAVNSVGELSLDVDCGDLVSLCSFLRD-DPHCCFV 55
M ED + + I F G V+ + + V FL++ DP +
Sbjct: 1 MSEGKEDFIVNEINRRFPGVEVQVKENKWGRKRIWVKVPREMFRDFMKFLKELDPDAHYS 60
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
I+ + L + + + + +P I I+P + FERE
Sbjct: 61 IGIEEDAGETLDF--SIHFLLMYEDAPGVSMIVKTSVPKDNPVLPDISDIFPISLQFERE 118
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
+M GI FE PD RR+ F +PLR D
Sbjct: 119 AMEMVGIDFENAPDKRRLFLPDDFPEGIYPLRHD 152
>gi|218886690|ref|YP_002436011.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218757644|gb|ACL08543.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 201
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFER 114
++ D+CG+D VYHF RL +++ + V I I+ GA+W ER
Sbjct: 56 HLEDICGLDVRE---GLVAVYHFDRMTAPGRLAIRVLMDRAAPVLPSIADIHQGAEWHER 112
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
E D YGI F G+P+ +L G +GHPL KD
Sbjct: 113 ETADFYGIAFTGNPNPAPLLLPEGMQGHPLLKD 145
>gi|164453464|gb|ABY57491.1| NADH dehydrogenase subunit J [Solanum tuberosum]
Length = 124
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + L +K+ + V ++
Sbjct: 12 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDDVDQPEELCIKVFASRRNPRIPSVFWVWK 71
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
D+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 72 SVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQ 121
>gi|164512994|emb|CAP11590.1| NADH dehydrogenase subunit J [Magnolia grandiflora]
gi|164512996|emb|CAP11591.1| NADH dehydrogenase subunit J [Magnolia guatemalensis]
Length = 111
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V I+
Sbjct: 11 YGYNYLRSQCAYDVAPGGLLASVYHLTKIEYGVDQPEEVCIKVFAPRRNPRIPSVFWIWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+
Sbjct: 71 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDY 111
>gi|1173549|gb|AAC44354.1| NADH dehydrogenase type 1 subunit [Nostoc sp. PCC 7120]
Length = 139
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSP 81
+ G + V+ ++ + + L F + G+D + V + +
Sbjct: 23 DKNGVEIIKVEPDFMLPIATAL---YAYGFNYLQFQGGIDLGPGQDLVSVYHLVKVSDNA 79
Query: 82 KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+RVK+ + V + I+ ADW ERE +DM+GI +EGHP+L+RIL +
Sbjct: 80 DKPEEVRVKVFLPRENPVVPSVYWIWKTADWQERESYDMFGIIYEGHPNLKRILMPGDW 138
>gi|171189210|gb|ACB42093.1| NADH dehydrogenase subunit J [Cattleya warneri]
Length = 129
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 17 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 76
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 77 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 126
>gi|52548540|gb|AAU82389.1| F420H2-quinone oxidoreductase 45 kD subunit [uncultured archaeon
GZfos17C7]
Length = 788
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 11/163 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+DL + +G +++ +LV L D ++ + +D
Sbjct: 203 KDLVKNLKAQLNGLYTSITVTDKNRIAIKTSPENLVETSRKLSD--TMGVDHVKSVNVID 260
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS----IVGIYPGADWFEREVWDMY 120
+ + + I G+ + ++ A++ ERE+ D +
Sbjct: 261 VPHERKFMVEYMVSGYTEELMPVILTIFTEIGREAEPEIPSLTSLWESANYSERELHDFF 320
Query: 121 GIFFEGHPDLR-RILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+G+ ++ + L PLRKDF + E Y +
Sbjct: 321 GVKFKGNEGMKGKFLLAPDTPDTPLRKDFKL---EEEQYTIEE 360
>gi|52549748|gb|AAU83597.1| F420H2-quinone oxidoreductase 45 kD subunit [uncultured archaeon
GZfos32E4]
Length = 788
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 11/163 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+DL + +G +++ +LV L D ++ + +D
Sbjct: 203 KDLVKNLKAQLNGLYTSITVTDKNRIAIKTSPENLVETSRKLSD--TMGVDHVKSVNVID 260
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS----IVGIYPGADWFEREVWDMY 120
+ + + I G+ + ++ A++ ERE+ D +
Sbjct: 261 VPHERKFMVEYMVSGYTEELMPVILTIFTEIGREAEPEIPSLTSLWESANYSERELHDFF 320
Query: 121 GIFFEGHPDLR-RILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
G+ F+G+ ++ + L PLRKDF + E Y +
Sbjct: 321 GVKFKGNEGMKGKFLLAPDTPDTPLRKDFKL---EEEQYTIEE 360
>gi|171189171|gb|ACB42075.1| NADH dehydrogenase subunit J [Cattleya labiata]
gi|171189186|gb|ACB42082.1| NADH dehydrogenase subunit J [Cattleya percivaliana]
Length = 129
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 17 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 76
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 77 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 126
>gi|240102770|ref|YP_002959079.1| NADH dehydrogenase subunit C [Thermococcus gammatolerans EJ3]
gi|239910324|gb|ACS33215.1| membrane bound oxidoreductase, MbxK subunit (MbxK) [Thermococcus
gammatolerans EJ3]
Length = 183
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
+ V + + F ++ + VD+L + V + +
Sbjct: 42 IEFKVPAERIHEFLELASE----KFEMLMQISVVDWLKQGEFELVYQLWSVSESVHAFVK 97
Query: 90 KIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT-DYGFEGHPLRKDF 148
+ VP+++ I+P A+ +ERE + +GI F+G+P L + +E HPLRKDF
Sbjct: 98 TRVPRDSAEVPTVMDIWPVAETYEREAHEFFGIIFKGNPRLGPFILEPREYEKHPLRKDF 157
Query: 149 PVTGFVELHYDDKVKK 164
+V+ Y + +
Sbjct: 158 NTLSYVKTIYGEDFDR 173
>gi|218176247|ref|YP_002364504.1| NADH-plastoquinone oxidoreductase subunit J [Festuca arundinacea]
gi|215882331|gb|ACJ70761.1| NADH-plastoquinone oxidoreductase subunit J [Festuca arundinacea]
Length = 159
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + GD S+ L + + C D + V + +
Sbjct: 29 TLQIKAGDWDSIAVILYV---YGYNYLRSPCAYDVAPGGSLASVYHLTRIQYGIDNPEEV 85
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + V I+ AD+ ERE +DM GI ++ H L RIL + G PLRK
Sbjct: 86 CIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHRRLIRILMPESWIGWPLRK 145
Query: 147 DFPVTGFVELH 157
D+ F E+
Sbjct: 146 DYITPNFYEIQ 156
>gi|21227165|ref|NP_633087.1| formate hydrogenlyase subunit 5 [Methanosarcina mazei Go1]
gi|20905500|gb|AAM30759.1| Formate hydrogenlyase subunit 5 precursor [Methanosarcina mazei
Go1]
Length = 530
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 21/180 (11%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M+ + + + E+ L + +C L + ++I L
Sbjct: 1 MLSTVSSIAQ-------EKLEILSTRENEIYLRISETGFKEVCPALAE----RKFSLIGL 49
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+ + F + Y F + L + K + SI +P A WFEREV D +
Sbjct: 50 FCAEAFEGKDNFTLFYAFKKGGMSPVLILVRETGNEKRITSIAETFPSASWFEREVRDGF 109
Query: 121 GIFFEGHPDLRRILTD--YGFEGHPLRKDF------PVTG-FVELHYDDKVKKVVYR-PV 170
GI F+G D RR+ Y HPL K F PV E + + VY+ PV
Sbjct: 110 GIEFDGAFDTRRLFLHECYPEGFHPLLKSFKNGPISPVEAPHKEYKFRQHKGEGVYQIPV 169
>gi|299830294|ref|YP_003734458.1| NADH dehydrogenase subunit 9 [Paramecium caudatum]
gi|299507853|emb|CAZ66837.1| NADH dehydrogenase subunit 9 [Paramecium caudatum]
Length = 184
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
+ ++NSV ++ L+ +F ++D FL ++N +
Sbjct: 32 CVPAEINQSLNSVLSHEFYLNKSQLLEATAF-----DLTNQQLVDNDFFFFLKKNNVVSL 86
Query: 75 VYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
+F + + R+ + + S Y A+W ERE+ +M+G+ F D R +L
Sbjct: 87 YSYFF---FFLKKRITFFMHTSNKIKSAESFYSNANWLEREISEMFGVTFLLKKDSRNLL 143
Query: 135 TDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPV 170
DYG +P K FP TG E+ ++ +K VY P+
Sbjct: 144 LDYGTNYNPFLKKFPATGHSEVVFNSFLKTTVYSPI 179
>gi|171189168|gb|ACB42074.1| NADH dehydrogenase subunit J [Cattleya jenmanii]
gi|171189173|gb|ACB42076.1| NADH dehydrogenase subunit J [Cattleya labiata]
Length = 125
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 13 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 72
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 73 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 122
>gi|164512974|emb|CAP11580.1| NADH dehydrogenase subunit J [Howea belmoreana]
Length = 110
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V V I+
Sbjct: 11 YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKVFVPRANPRIPSVFWIWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
AD+ ERE +DM GI +E HP L+RIL + G PLRKD
Sbjct: 71 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKD 110
>gi|166092839|gb|ABY82371.1| NADH dehydrogenase subunit J [Silene littorea]
Length = 99
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
+PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F
Sbjct: 33 RSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNF 92
Query: 154 VELH 157
E+
Sbjct: 93 YEIQ 96
>gi|163311518|gb|ABY26721.1| NdhJ [Solanum lycopersicum]
Length = 126
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + L +K+ + V ++
Sbjct: 13 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVAQPEELCIKVFASRRNPRIPSVFWVWK 72
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
D+ ERE +DM GI ++ HP L+RIL + G PLRKD+ F E+
Sbjct: 73 SVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQ 122
>gi|264684049|emb|CAP46276.1| NADH dehydrogenase [Inga feuillei]
gi|264684055|emb|CAP46279.1| NADH dehydrogenase [Inga sapindoides]
Length = 125
Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 7/118 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 11 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 67
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 68 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 125
>gi|164512964|emb|CAP11575.1| NADH dehydrogenase subunit J [Fritillaria micrantha]
Length = 110
Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V V ++
Sbjct: 11 YGYNYLRSQCAYDIAPGGFLASVYHLTRIRYGIDKPEEVCIKVFVPRTNPRIPSVFWVWR 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
AD+ ERE +DM GI + HP L+RIL + G PLRKD
Sbjct: 71 SADFQERESYDMLGISYNNHPRLKRILMPESWIGWPLRKD 110
>gi|164513066|emb|CAP11626.1| NADH dehydrogenase subunit J [Weinmannia sp. CF-2007]
Length = 129
Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+ V D S+ L + + C D V + +
Sbjct: 11 TFQVKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEHGIDQPEEV 67
Query: 88 RVKIA-VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ + +PS ++ AD+ ERE +DM GI + HP L+RIL + G PL++
Sbjct: 68 CIKVFALRRNPRIPSAFWVWKSADFQERESFDMLGISYHNHPRLKRILMPESWIGWPLQE 127
Query: 147 DF 148
D+
Sbjct: 128 DY 129
>gi|171189181|gb|ACB42080.1| NADH dehydrogenase subunit J [Cattleya luteola]
Length = 143
Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSFFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD+ F E+
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYITPNFYEIQ 140
>gi|254173157|ref|ZP_04879830.1| membrane bound hydrogenase, NiFe-hydrogenase large subunit 1
[Thermococcus sp. AM4]
gi|214032566|gb|EEB73395.1| membrane bound hydrogenase, NiFe-hydrogenase large subunit 1
[Thermococcus sp. AM4]
Length = 188
Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 12/153 (7%)
Query: 3 RKIEDLGDYIVNSFSGS---VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
K E + I F + VR + + +D L F++
Sbjct: 16 TKAEKVAKAIAERFPNAQVEVRTNKWGRERVWVRIDRESYRELMRFIKTLDG----EAHY 71
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFEREV 116
G++ + + + + + + + V + ++P I I+P A FERE
Sbjct: 72 SIGIEQDWGNELGFLSHLVIYYDDAPAVSLIVDVHAPKDDPTLPDISDIFPIALQFEREG 131
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
+M GI FE PD RR+ F +PLR D
Sbjct: 132 MEMVGIDFENAPDKRRLFLPDDFPEGIYPLRLD 164
>gi|164513044|emb|CAP11615.1| NADH dehydrogenase subunit J [Protea sulphurea]
gi|164513046|emb|CAP11616.1| NADH dehydrogenase subunit J [Protea witzenbergiana]
Length = 92
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+PS+ I+ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 38 RRNPKIPSVFWIWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 92
>gi|264684059|emb|CAP46281.1| NADH dehydrogenase [Inga gracilior]
Length = 124
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 7/118 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 10 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 66
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 67 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 124
>gi|240102095|ref|YP_002958403.1| membrane bound hydrogenase, MbhK subunit (MbhK) [Thermococcus
gammatolerans EJ3]
gi|239909648|gb|ACS32539.1| membrane bound hydrogenase, MbhK subunit (MbhK) [Thermococcus
gammatolerans EJ3]
Length = 188
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 6/150 (4%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS---VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
K + + + I F + + + + + D +L F+++ +I
Sbjct: 16 TKTQKVAETIAKRFPNAQVEVRVNKWGRERVWVRIPREDYKALMRFIKELDGEAHYSIGI 75
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ + H+ + A + +P I ++P A +ERE +M
Sbjct: 76 EQDLGD-ELGFLSHLAIHYDDAPAVSLIVDVRAPKDDPVIPDISDVFPIATQYEREAAEM 134
Query: 120 YGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
GI FEG PD RR+ F +PLR D
Sbjct: 135 VGIVFEGIPDKRRLFLPDDFPEGIYPLRLD 164
>gi|164512946|emb|CAP11566.1| NADH dehydrogenase subunit J [Diospyros transitoria]
Length = 111
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V ++
Sbjct: 11 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKVFAPRRNPRIPSVFWVWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 71 SVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 111
>gi|58617035|ref|YP_196234.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Gardel]
gi|58416647|emb|CAI27760.1| NADH-quinone oxidoreductase chain C [Ehrlichia ruminantium str.
Gardel]
Length = 77
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
N R+ K+++ E +++ SI I+ A WFERE +DMYGI F +PDLRRILTDYGF
Sbjct: 1 MIANNIRIFCKVSLHENENITSITNIFNAAGWFEREAFDMYGILFTNNPDLRRILTDYGF 60
>gi|160902352|ref|YP_001567933.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Petrotoga mobilis
SJ95]
gi|160359996|gb|ABX31610.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Petrotoga mobilis
SJ95]
Length = 184
Score = 71.9 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
++L + + SF ++ E+S+ V+ +L ++ ++L+D + + +
Sbjct: 4 TNDAKELINILEKSF--DIKDFTTPKKNEISIVVEQNNLPTILTYLKDK---GWKQLSLI 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
VD++ + V F + E SI+ I+PGA ++ER++ + +
Sbjct: 59 TCVDWIKENKFELVYVLFNWANGITFVVKTKIERENPEYISIIDIFPGARYYERDIHEFF 118
Query: 121 GIFFEGHPDL-RRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKV 165
G+ FEG+ D + + + + P+RKDF + + + D+ V
Sbjct: 119 GVKFEGNSDSEKPLFLELWDDKPPMRKDFDPLEYSKRKFPDRKYDV 164
>gi|258593564|emb|CBE69905.1| Hydrogenase, large subunit-like protein (HycE-like) [NC10 bacterium
'Dutch sediment']
Length = 527
Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
E+ ++++ +L ++RD C +I D + F + Y F + +
Sbjct: 28 EVRVNIERDELPPFADYVRD-RFCAKPELI--VAEDTRAERGAFTLRYLFELEGVDLFIV 84
Query: 89 VKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLR 145
AV + PS+ + A FERE+ D++G+ GHPDLRR+ + HPL
Sbjct: 85 ASAAVLENDRRFPSLATRWYLASRFEREMHDLFGLLPTGHPDLRRLPLHQFWPAAYHPLL 144
Query: 146 KDFP 149
KD P
Sbjct: 145 KDAP 148
>gi|289549192|ref|YP_003474180.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermocrinis albus
DSM 14484]
gi|289182809|gb|ADC90053.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermocrinis albus
DSM 14484]
Length = 500
Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
++ + G D +F + Y F + + R+ + + +S PSI + P A +ERE
Sbjct: 28 YLLAVVGSDERELRGKFCIRYFFFTEQRKLRV---LELLCEESFPSITPLCPAAKLYERE 84
Query: 116 VWDMYGIFFEGHPDLRRILTD---YGFEGHPLRKDFP-----VTGFVELHYDDKV 162
+ DM+G+ GHPD R ++ + HPLRKDF + + Y D
Sbjct: 85 IKDMFGLEPVGHPDPRPLMLHPENWPPHLHPLRKDFDGRKPAMEKYGTYRYKDVE 139
>gi|301353377|ref|YP_003795583.1| NADH-plastoquinone oxidoreductase subunit J [Pteridium aquilinum
subsp. aquilinum]
gi|301016295|gb|ADK47582.1| NADH-plastoquinone oxidoreductase subunit J [Pteridium aquilinum
subsp. aquilinum]
Length = 170
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 1/128 (0%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
L V + +S+ + + + + + K
Sbjct: 40 ILQVKSEEWLSVAVAPYAYGSNYSRSQCAYDATPGGFLVSVYHLTQMRDQSDQPEEVCTK 99
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
I V + ++ +D ERE +DM GI + HP L+RIL + G PLRKD+
Sbjct: 100 IFVPRKNPRIPSVYWVWKSSDLQERESYDMLGITHQDHPHLKRILMPESWIGWPLRKDYV 159
Query: 150 VTGFVELH 157
V F EL
Sbjct: 160 VPNFYELQ 167
>gi|164513042|emb|CAP11614.1| NADH dehydrogenase subunit J [Protea angustata]
Length = 92
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+PS+ I+ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 38 RRNPKIPSVFWIWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 92
>gi|309812457|ref|ZP_07706212.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit [Dermacoccus
sp. Ellin185]
gi|308433762|gb|EFP57639.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit [Dermacoccus
sp. Ellin185]
Length = 189
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 32 LDVDCGDLVSLCSFLRDD--PHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP-------- 81
+DV + ++ R D FV +D D + FD+V H
Sbjct: 8 VDVALDEWIATHEAHRADGYTFFDFVTAVDETDRDLPDKPAGFDLVSHLYEIGDGDVRGV 67
Query: 82 --KYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPD-----LRRI 133
R RV +A + PS+ G++ GA W ERE ++M+GI F+G D LR++
Sbjct: 68 RASVMTRARVPLASGDDPAHAPSLTGLWRGAAWHERETFEMFGIVFDGFDDGTGAGLRKL 127
Query: 134 LTDYGFEGHPLRKDFPVT 151
L F G PLRK F +T
Sbjct: 128 LLPETFIGTPLRKSFVLT 145
>gi|145591230|ref|YP_001153232.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pyrobaculum
arsenaticum DSM 13514]
gi|145282998|gb|ABP50580.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pyrobaculum
arsenaticum DSM 13514]
Length = 177
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 17/155 (10%)
Query: 8 LGDYIVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L I + + V G L + V + + S ++ F +++ L +D++
Sbjct: 17 LLAKIKQAIGPAYLAHGVTPEGHLCVMVQADKIREVASAVK---SMGFDHVLSLSAIDYM 73
Query: 67 SRSNRFDVVYHFLSPKYNRR---LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGI 122
+ + L V+ + + SI I+P AD+ ERE +M+GI
Sbjct: 74 AEKKFVVTYIFASYLSPELKGQLLHVRTEIPRDNPKIASIADIFPSADYEERECHEMFGI 133
Query: 123 FFEGHPDL-RRILTDYG--------FEGHPLRKDF 148
+FEG+ + +R L D +PLRKDF
Sbjct: 134 WFEGNTHMGKRFLLDPDCCIDEKTGKPLYPLRKDF 168
>gi|156937335|ref|YP_001435131.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Ignicoccus hospitalis
KIN4/I]
gi|156566319|gb|ABU81724.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Ignicoccus hospitalis
KIN4/I]
Length = 540
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKY 83
L ++V+ + L+D F ++ L VD+ +
Sbjct: 10 KEWSNALYVEVEPQYWYENAARLKD-QGYLFPSM--LTAVDWPAEKKVQVFFLVHRIRDA 66
Query: 84 NRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD------LRRILTDY 137
+ + E + +PS+ +YPG +W E E ++M+GI F GHPD +R++L
Sbjct: 67 SSVVLSTKVDRENRELPSLSSLYPGVEWHENETYEMFGINFTGHPDYERWGRIRKLLLSE 126
Query: 138 GFEGHPLRKD-FPV 150
P KD FP+
Sbjct: 127 DPRLFP--KDRFPL 138
>gi|264684063|emb|CAP46283.1| NADH dehydrogenase [Inga nobilis]
Length = 103
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPS-IVGIYP 107
+ + C D V + + +K+ V+ I ++
Sbjct: 4 YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFVSRKNPRIPSIFWVWK 63
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 64 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKD 103
>gi|167889405|gb|ACA09937.1| NADH dehydrogenase subunit J [Searsia gueinzii]
gi|167889407|gb|ACA09938.1| NADH dehydrogenase subunit J [Searsia gueinzii]
gi|167889409|gb|ACA09939.1| NADH dehydrogenase subunit J [Searsia gueinzii]
gi|167889411|gb|ACA09940.1| NADH dehydrogenase subunit J [Searsia leptodictya]
gi|167889413|gb|ACA09941.1| NADH dehydrogenase subunit J [Searsia leptodictya]
gi|167889415|gb|ACA09942.1| NADH dehydrogenase subunit J [Searsia leptodictya]
gi|167889417|gb|ACA09943.1| NADH dehydrogenase subunit J [Searsia transvaalensis]
gi|167889419|gb|ACA09944.1| NADH dehydrogenase subunit J [Searsia transvaalensis]
gi|167889421|gb|ACA09945.1| NADH dehydrogenase subunit J [Searsia transvaalensis]
Length = 112
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKV 57
Query: 92 AVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+PS+ ++ A++ ERE +DM GIF++ HP L+RIL + G PLR
Sbjct: 58 FAPRSNPKIPSVFWVWKSANFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLR 112
>gi|326202174|ref|ZP_08192044.1| NADH dehydrogenase (quinone) [Clostridium papyrosolvens DSM 2782]
gi|325987969|gb|EGD48795.1| NADH dehydrogenase (quinone) [Clostridium papyrosolvens DSM 2782]
Length = 530
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Query: 6 EDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E + D I + V+ + E+ + + C + ++ C ++DL D
Sbjct: 4 EAIFDTINRLLAPHVQEGRLINENEVYFCISPSTVKEDCINVYENIEC---VLVDLFAND 60
Query: 65 FLSRSNRFDVVYHF--LSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+N+ V Y F S L K+ + SI P A +ERE+ DMYGI
Sbjct: 61 TTPINNKLTVYYTFAVRSSNTIVTLYSKLENDGSAMLDSIALEVPAASLYEREIHDMYGI 120
Query: 123 FFEGHPDLRRILTDYGFE--GHPLRKDFPVTGF 153
F+G PD R ++ F HPL++DF V
Sbjct: 121 DFKGCPDSRELVHHGNFPQNVHPLKRDFKVNKH 153
>gi|187251538|ref|YP_001876020.1| putative ech protein [Elusimicrobium minutum Pei191]
gi|186971698|gb|ACC98683.1| Putative Ech hydrogenase component [Elusimicrobium minutum Pei191]
Length = 175
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 8/152 (5%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
E+L + + F G + + D+ + L + F + + GVD
Sbjct: 8 EELKELLEKDFDGMITDVTIKKLHRVYCMALGKDIYPITEILMN--KLGFDYLCTITGVD 65
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ +YH+ S + + + + SI + GA ++ERE+ D+ G+
Sbjct: 66 ---CGDSIHALYHWGSKEGVLLTIEAVLPMDNLKLKSITPLIRGAVYYERELADLLGVEV 122
Query: 125 EGHPDLRRILTDYGFEG--HPLRKDFPVTGFV 154
EG P+ R D F +PLRK++ ++
Sbjct: 123 EGLPEGNRYPLDEDFPKDQYPLRKNWDAAKYI 154
>gi|154819505|gb|ABS88037.1| NADH dehydrogenase subunit J [Dendrobium nobile]
Length = 98
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+PS+ ++ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 38 RSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 92
>gi|154819485|gb|ABS88027.1| NADH dehydrogenase subunit J [Amorphophallus muelleri]
Length = 97
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
+ +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+
Sbjct: 37 RKNPGIPSVFWVWRSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 91
>gi|171189136|gb|ACB42058.1| NADH dehydrogenase subunit J [Cattleya aclandiae]
Length = 143
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI +E HP L+RIL + G PLRKD F E+
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRKDSITPNFYEIQ 140
>gi|242399278|ref|YP_002994702.1| Membrane-bound hydrogenase MBH 1, subunit Mbh1K (hydrogenase
subunit) [Thermococcus sibiricus MM 739]
gi|242265671|gb|ACS90353.1| Membrane-bound hydrogenase MBH 1, subunit Mbh1K (hydrogenase
subunit) [Thermococcus sibiricus MM 739]
Length = 174
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS----VGELSLDVDCGDLVSLCSFLRD-DPHCCFVNIIDL 60
E+L I F + + + +++ D L + ++ DPH F II
Sbjct: 4 EELIKRIKERFEVEIYTSQTKTPHPRERIWIEISRNDFKELMKYFQEIDPHTQFSIIIGE 63
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
D LS + ++ SP + + E +PS+ ++P + +ERE +
Sbjct: 64 DRGDHLSATYHLELFCE-NSPSLSVAVITSCP-KEDPKIPSLGDVFPSSVPYERENQEFL 121
Query: 121 GIFFEGHPDLRRILTDYGFEG--HPLRKD 147
GI FEG PD RR+ F +PLR D
Sbjct: 122 GIIFEGIPDSRRLFLPDDFPEGIYPLRLD 150
>gi|327400429|ref|YP_004341268.1| NADH-quinone oxidoreductase subunit B [Archaeoglobus veneficus
SNP6]
gi|327315937|gb|AEA46553.1| NADH-quinone oxidoreductase, B subunit [Archaeoglobus veneficus
SNP6]
Length = 362
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 10/156 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+L + G + V + + V + L +D F ++ + +D
Sbjct: 207 NELVSRLSEKLGGLGEVFITGVNRIYIKTTKERFVRVAEILSED----FDHVKSVNVID- 261
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAV-----AEGKSVPSIVGIYPGADWFEREVWDMY 120
L NRF + Y S + V + + + PS++ I+P AD+ ERE++D +
Sbjct: 262 LIHENRFVIEYTVSSYSVKELMSVLVTISAEIPRDNPKFPSLINIWPSADYQEREMYDFF 321
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVEL 156
G++FEG+P + PLRKDF + +
Sbjct: 322 GVWFEGNPWMGNKFLIAPEVETPLRKDFKIPQPNYV 357
>gi|164452430|gb|ABY57056.1| NADH dehydrogenase subunit J [Asplenium septentrionale]
Length = 125
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V + P + +
Sbjct: 13 TLQVKSEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V +PS+ ++ +D+ ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPREHPKIPSVYWVWKSSDFQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|164452422|gb|ABY57052.1| NADH dehydrogenase subunit J [Asplenium dalhousiae]
Length = 125
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V Y P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPRKDPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|254172312|ref|ZP_04878988.1| NADH dehydrogenase subunit c [Thermococcus sp. AM4]
gi|214034208|gb|EEB75034.1| NADH dehydrogenase subunit c [Thermococcus sp. AM4]
Length = 199
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 5/131 (3%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA 94
+ + F +I + VD+L V + +
Sbjct: 63 PAEKIHEFLELASE----RFEMLIQISVVDWLKEGEFELVYQLWSVSESVHAFVKTRIPR 118
Query: 95 EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT-DYGFEGHPLRKDFPVTGF 153
E +P+++ I+P A+ +ERE + +GI F+G+P L + +E HP RKDF +
Sbjct: 119 ENAEMPTVMDIWPVAETYEREAHEFFGINFKGNPRLGPFILEPREYEKHPFRKDFNTLSY 178
Query: 154 VELHYDDKVKK 164
V+ Y D +
Sbjct: 179 VKAIYGDDFDR 189
>gi|320101195|ref|YP_004176787.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurococcus
mucosus DSM 2162]
gi|319753547|gb|ADV65305.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurococcus
mucosus DSM 2162]
Length = 338
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
V L + L++ ++ ++++ VD+ +V Y +P + VK
Sbjct: 207 TVSPARLREVLVELKNK---GYILLVNIDTVDYPE-KGVIEVYYIVENPSDASQTWVKTY 262
Query: 93 VAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPV 150
V + S+ IYP A + EREV++ GI F HP+L++ + + +EG PLRKD
Sbjct: 263 VGRAAPEIDSVSDIYPIAKYIEREVYEFMGIVFRNHPELKKWILEGNWEGPPPLRKDVDT 322
Query: 151 TGFV 154
GFV
Sbjct: 323 AGFV 326
>gi|198279043|emb|CAP04555.1| NADH dehydrogenase subunit J [Dactylorhiza foliosa]
gi|198279047|emb|CAP04557.1| NADH dehydrogenase subunit J [Dactylorhiza fuchsii]
gi|198279051|emb|CAP04559.1| NADH dehydrogenase subunit J [Dactylorhiza maculata]
Length = 128
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 13 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
A+ PS+ I+ AD+ ERE +DM GIF++ HP L+RIL + G PLR
Sbjct: 72 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLR 128
>gi|284162674|ref|YP_003401297.1| NADH-quinone oxidoreductase subunit beta [Archaeoglobus profundus
DSM 5631]
gi|284012671|gb|ADB58624.1| NADH-quinone oxidoreductase, B subunit [Archaeoglobus profundus DSM
5631]
Length = 709
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+D + + VR V D+ L H F N+ D+ +D
Sbjct: 178 DDYAKTLEDVLG--VRVYTVGKDHYYAFV--DDVKRSAEIL---AHLGFDNVKDVNVLDV 230
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ F V + + + + + + + + V S+ I+P +D+ ERE+ + +G+ F
Sbjct: 231 P-HEDTFIVEFTLHNYENYKLVTLAKRISRKNPKVESLSDIFPSSDYMEREMHEFFGVVF 289
Query: 125 EGHPDL-RRILTDYGFEGHPLRKDFPV 150
EG+ + R L D PLRKDF +
Sbjct: 290 EGNKWMGRNFLLDVSTPKFPLRKDFRL 316
>gi|325969611|ref|YP_004245803.1| NADH-quinone oxidoreductase subunits B and C [Vulcanisaeta
moutnovskia 768-28]
gi|323708814|gb|ADY02301.1| NADH-quinone oxidoreductase subunits B and C [Vulcanisaeta
moutnovskia 768-28]
Length = 419
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 21 RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS 80
+ V V + ++ + L L F ++ + +D N+F V Y S
Sbjct: 213 KIVVTDVNRICVNTEPNKLRDAALSL---SKLGFDHVKSVNVIDAP-HENKFYVEYWISS 268
Query: 81 PKYNRRLRVKIAVAEGKSVP-----SIVGIYPGADWFEREVWDMYGIFFEGHPDL-RRIL 134
+ V +++ S++ ++P AD+ ERE++D +G++FEG+P + + L
Sbjct: 269 YSKKELMPVLVSLTTEIPRDNPRVLSLIDVWPSADYMEREMYDFFGVWFEGNPWMGKNFL 328
Query: 135 TDYG-FEGHPLRKDFPV 150
D PLRKD P+
Sbjct: 329 LDPDTPVKFPLRKDVPI 345
>gi|149195033|ref|ZP_01872125.1| NADH dehydrogenase subunit D [Caminibacter mediatlanticus TB-2]
gi|149134746|gb|EDM23230.1| NADH dehydrogenase subunit D [Caminibacter mediatlanticus TB-2]
Length = 557
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Query: 35 DCGDLVSLCSFLRDD--PHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+ DL+ L L++ C V+ D + + + + +S K ++ V +
Sbjct: 30 NKEDLIPLVKKLKEVGVKSCSTVSPTDFIDEGRIEVNYFLESLSPKISSKEKEKVNVWLK 89
Query: 93 VA-----EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRK 146
V E + SI I P A++ E E + +G+ F+GHP+LR L + G P RK
Sbjct: 90 VDLDRDLENCEIDSITPIMPSANYHELEAYSTFGVKFKGHPNLRFFLISRDYYGKFPFRK 149
Query: 147 DFPVTGFV 154
DF
Sbjct: 150 DFDWKAHE 157
>gi|166092848|gb|ABY82377.1| NADH dehydrogenase subunit J [Silene sorensenis]
Length = 79
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
+PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F
Sbjct: 13 RSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNF 72
Query: 154 VELH 157
E+
Sbjct: 73 YEIQ 76
>gi|164452434|gb|ABY57058.1| NADH dehydrogenase subunit J [Asplenium trichomanes subsp.
pachyrachis]
Length = 125
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V + P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPRKDPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|151367620|gb|ABS10578.1| NADH dehydrogenase subunit J [Commelina purpurea]
Length = 126
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 3 TLQIKTEDWDSIAVILYV---YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYDIDKPEEI 59
Query: 88 RVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V I+ AD+ ERE +DM GI ++ L+RIL + G PLRK
Sbjct: 60 CIKVFAPRKNPRIPSVFWIWRSADFQERESYDMLGISYDNXXRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|323141863|ref|ZP_08076724.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Phascolarctobacterium sp. YIT 12067]
gi|322413610|gb|EFY04468.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Phascolarctobacterium sp. YIT 12067]
Length = 502
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
V +L + D + + G D + + F + +K
Sbjct: 3 VKPENLRGAANICSDS---GKRPLAAMFGADETLQGGGLAIYCLFYNAAKRDIDVLKAPF 59
Query: 94 AEGKS--VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRKDFP 149
S+ + P A W+ERE+ DM+G +GHPD+R ++ F HPL K +P
Sbjct: 60 PADGPLEYQSLTTLLPAAAWYERELHDMFGFEPQGHPDMRPLVLHESFPEGFHPLLKKYP 119
>gi|164452418|gb|ABY57050.1| NADH dehydrogenase subunit J [Asplenium aureum]
Length = 125
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V Y P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPRKDPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|167889361|gb|ACA09915.1| NADH dehydrogenase subunit J [Grewia bicolor]
gi|167889363|gb|ACA09916.1| NADH dehydrogenase subunit J [Grewia bicolor]
gi|167889365|gb|ACA09917.1| NADH dehydrogenase subunit J [Grewia bicolor]
gi|167889367|gb|ACA09918.1| NADH dehydrogenase subunit J [Grewia flavescens]
gi|167889369|gb|ACA09919.1| NADH dehydrogenase subunit J [Grewia flavescens]
gi|167889371|gb|ACA09920.1| NADH dehydrogenase subunit J [Grewia flavescens]
gi|167889373|gb|ACA09921.1| NADH dehydrogenase subunit J [Grewia villosa]
gi|167889375|gb|ACA09922.1| NADH dehydrogenase subunit J [Grewia villosa]
gi|167889377|gb|ACA09923.1| NADH dehydrogenase subunit J [Grewia villosa]
Length = 112
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 58 FAPRSNPRIPSVFWVWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|164452442|gb|ABY57062.1| NADH dehydrogenase subunit J [Asplenium adiantum-nigrum]
Length = 125
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D V + P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGPLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V + +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPRKEPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|164452410|gb|ABY57046.1| NADH dehydrogenase subunit J [Asplenium ceterach]
gi|164452412|gb|ABY57047.1| NADH dehydrogenase subunit J [Asplenium ceterach]
Length = 125
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V Y P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEV 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V + +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVSRKDPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|303247494|ref|ZP_07333766.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
fructosovorans JJ]
gi|302491190|gb|EFL51082.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
fructosovorans JJ]
Length = 184
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
S+ + + + L + + + D+ D F+V YH R+ ++
Sbjct: 27 SVTLTAETVHDAVAVLFAEGYL----LEDVMASDL---EEGFEVAYHLSLLDGANRIVLR 79
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ V + I+ GADW ERE +D YGI F GHP+L +L + PL K
Sbjct: 80 LTVPHDNPTVPTVTDIFTGADWHERECFDFYGIIFSGHPNLHHLLLPEDSDIAPLVK 136
>gi|118579033|ref|YP_900283.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pelobacter
propionicus DSM 2379]
gi|118501743|gb|ABK98225.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pelobacter
propionicus DSM 2379]
Length = 159
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 9/135 (6%)
Query: 15 SFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDV 74
SGS+R + + +DV + + ++R F + + G L F V
Sbjct: 17 ELSGSIRIVRSRR--IFVDVPDQRFLEVLDYVR--GELGFPILCLIVG---LDEGENFGV 69
Query: 75 VYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
+Y S + + + SI P ++ +ERE+ DM+GI G PD R
Sbjct: 70 IYILASGDGTLASLTRRIPRDEPVICSIYDRMPNSEIYERELVDMFGIHVTGLPDGSRYP 129
Query: 135 TDYGFEG--HPLRKD 147
+ PLRKD
Sbjct: 130 LPDDWPEGQFPLRKD 144
>gi|164513018|emb|CAP11602.1| NADH dehydrogenase subunit J [Nicotiana noctiflora]
gi|164513020|emb|CAP11603.1| NADH dehydrogenase subunit J [Nicotiana petunioides]
Length = 110
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ + V ++
Sbjct: 11 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKVFASRRNPRIPSVFWVWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
D+ ERE +DM GI ++ HP L+RIL + G PLRKD
Sbjct: 71 SVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKD 110
>gi|220929109|ref|YP_002506018.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Clostridium
cellulolyticum H10]
gi|219999437|gb|ACL76038.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Clostridium
cellulolyticum H10]
Length = 530
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 8/146 (5%)
Query: 8 LGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
+ D I S + + + E+ + + C + + C ++ L D
Sbjct: 6 ILDTIKRLLSSHILESRLINENEIYFCISPSTVKEDCINVYKNIEC---VLVGLFANDTT 62
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK--SVPSIVGIYPGADWFEREVWDMYGIFF 124
N+ V Y F N + + + V SI P A +ERE+ DMYGI F
Sbjct: 63 PIDNKLTVYYTFAVRSSNTLITLYSKLENDGSAKVDSIALEVPAASLYEREIHDMYGIVF 122
Query: 125 EGHPDLRRILTDYGFE--GHPLRKDF 148
E PD R ++ F HPLR++F
Sbjct: 123 EELPDSRELVHHGNFPLDVHPLRRNF 148
>gi|18977805|ref|NP_579162.1| mbh11 membrane bound hydrogenase beta (NADH dehydrogenase)
[Pyrococcus furiosus DSM 3638]
gi|18893554|gb|AAL81557.1| mbh11 membrane bound hydrogenase beta (NADH dehydrogenase)
[Pyrococcus furiosus DSM 3638]
Length = 173
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 14/155 (9%)
Query: 2 VRKIEDLGDYIVNSFSGS---VRFAVNSVGELSLDVDCGDLVSLCSFLRD-DPHCCFVNI 57
+ K E + + I F + V+ + + + + L F+R+ DP +
Sbjct: 1 MSKAEMVANKIKERFPNAEVVVKTNKWGRERVWVRISREEYKELMKFIRELDPEAHYSI- 59
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFER 114
G++ + + L + + I V + +P I+P + FER
Sbjct: 60 ----GIEQDWGDELGFLNHILLFYDEPPGVSLLIDVHAPKDNPVLPDTSDIFPISLQFER 115
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
E +M G+ FEG PD RR+ F +PLR D
Sbjct: 116 EGMEMVGLDFEGAPDKRRLFLPDDFPEGIYPLRTD 150
>gi|167889271|gb|ACA09870.1| NADH dehydrogenase subunit J [Acacia exuvialis]
gi|167889273|gb|ACA09871.1| NADH dehydrogenase subunit J [Acacia exuvialis]
gi|167889275|gb|ACA09872.1| NADH dehydrogenase subunit J [Acacia nigrescens]
gi|167889277|gb|ACA09873.1| NADH dehydrogenase subunit J [Acacia nigrescens]
gi|167889279|gb|ACA09874.1| NADH dehydrogenase subunit J [Acacia nigrescens]
gi|167889281|gb|ACA09875.1| NADH dehydrogenase subunit J [Acacia tortilis]
gi|167889283|gb|ACA09876.1| NADH dehydrogenase subunit J [Acacia tortilis]
gi|167889285|gb|ACA09877.1| NADH dehydrogenase subunit J [Acacia tortilis]
Length = 112
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKV 57
Query: 92 AVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|167889238|gb|ACA09855.1| NADH dehydrogenase subunit J [Ponthieva racemosa]
Length = 112
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + S + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIGSSIDKPEEVCIKVFAPRSNSKTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|164512906|emb|CAP11546.1| NADH dehydrogenase subunit J [Babiana torta]
Length = 113
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + + A+ +PS+ I+
Sbjct: 13 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFALRSNPKIPSVFCIWK 72
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
D+ ERE +DM G ++ HP L+RIL + G PLRKD+
Sbjct: 73 SVDFQERESYDMLGSSYDNHPRLKRILMPESWIGWPLRKDY 113
>gi|167889295|gb|ACA09882.1| NADH dehydrogenase subunit J [Combretum apiculatum]
gi|167889297|gb|ACA09883.1| NADH dehydrogenase subunit J [Combretum apiculatum]
gi|167889299|gb|ACA09884.1| NADH dehydrogenase subunit J [Combretum apiculatum]
Length = 112
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FAPRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|167889177|gb|ACA09835.1| NADH dehydrogenase subunit J [Barbosella prorepens]
Length = 112
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + S + +K+ G V I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGLLASVYHLTKIQYSMGKPEEVCIKVFAPRGNPRIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GIF++ HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIFYDNHPRLKRILMPESWIGWPLR 112
>gi|164452420|gb|ABY57051.1| NADH dehydrogenase subunit J [Asplenium dalhousiae]
gi|164452424|gb|ABY57053.1| NADH dehydrogenase subunit J [Asplenium parvifolium]
Length = 125
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V Y P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPRKDPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWMGW 125
>gi|167889242|gb|ACA09857.1| NADH dehydrogenase subunit J [Ponthieva racemosa]
Length = 112
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + S + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIGSSIDKPEEVCIKVFAPRSNSKTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|301059632|ref|ZP_07200541.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit [delta
proteobacterium NaphS2]
gi|300446278|gb|EFK10134.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit [delta
proteobacterium NaphS2]
Length = 178
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
L + L+S L + + D+ +D F +VYH + + R+ + +
Sbjct: 28 LFLSPESLLSTVQSLYHEEFF----LEDISTLDARE---GFVIVYHLSAYQGPERVALHV 80
Query: 92 AVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL-RKD 147
+ + +PSI +Y GA W ERE D +GI F GHPD + +L G HPL RK+
Sbjct: 81 ILPHHEPQIPSISTVYSGALWHERETTDFFGIRFAGHPDPKPLLLPEGMTDHPLQRKE 138
>gi|164452440|gb|ABY57061.1| NADH dehydrogenase subunit J [Asplenium adiantum-nigrum subsp.
silesiacum]
Length = 125
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V + P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V + +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPRKEPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|194376686|dbj|BAG57489.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
+++ G+Y+ V+ S EL + + ++ + +FLRD + F +++DL
Sbjct: 56 KQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLT 115
Query: 62 GVDFLSRSNRFDVVYHF 78
VD +R NRF+V +
Sbjct: 116 AVDVPTRQNRFEVSWEI 132
>gi|167889399|gb|ACA09934.1| NADH dehydrogenase subunit J [Myrothamnus flabellifolia]
gi|167889401|gb|ACA09935.1| NADH dehydrogenase subunit J [Myrothamnus flabellifolia]
gi|167889403|gb|ACA09936.1| NADH dehydrogenase subunit J [Myrothamnus flabellifolia]
Length = 112
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|218884332|ref|YP_002428714.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Desulfurococcus
kamchatkensis 1221n]
gi|218765948|gb|ACL11347.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Desulfurococcus
kamchatkensis 1221n]
Length = 545
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 12 IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
+ G + + L + +LV S L ++ + +D +
Sbjct: 13 LAGKLGGK---HLVEGDMVHLYIPRENLVKAASTLFNEYRLTHRTCV---AIDERPLNGF 66
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDL 130
F + + F + VK + V IVG P ADW E E D+ GI FEG
Sbjct: 67 FTLTHIFTDDSSRLYVLVKTYLEGDNPVAPSIVGEVPAADWCELEAMDLLGIQFEGRRRE 126
Query: 131 RRILTDYGFEG-HPLRKDF 148
R +L Y +G +PLRK+F
Sbjct: 127 RLVLPPYWPDGVYPLRKEF 145
>gi|167889355|gb|ACA09912.1| NADH dehydrogenase subunit J [Ficus sycomorus]
gi|167889357|gb|ACA09913.1| NADH dehydrogenase subunit J [Ficus sycomorus]
gi|167889359|gb|ACA09914.1| NADH dehydrogenase subunit J [Ficus sycomorus]
Length = 112
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVK 90
D S+ L + + C D V + + +
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKV 57
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
A+ +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FALRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|167889454|gb|ACA09961.1| NADH dehydrogenase subunit J [Tapinanthus sp. OM 825]
Length = 112
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FAPRSNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|167889301|gb|ACA09885.1| NADH dehydrogenase subunit J [Combretum collinum]
gi|167889303|gb|ACA09886.1| NADH dehydrogenase subunit J [Combretum collinum]
gi|167889305|gb|ACA09887.1| NADH dehydrogenase subunit J [Combretum collinum]
gi|167889307|gb|ACA09888.1| NADH dehydrogenase subunit J [Combretum hereroense]
gi|167889311|gb|ACA09890.1| NADH dehydrogenase subunit J [Combretum hereroense]
Length = 112
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FAPRSNPRIPSVFWVWKSADFQERESYDMLGICYDNHPRLKRILMPESWIGWPLR 112
>gi|167889343|gb|ACA09906.1| NADH dehydrogenase subunit J [Ficus abutilifolia]
gi|167889345|gb|ACA09907.1| NADH dehydrogenase subunit J [Ficus abutilifolia]
gi|167889347|gb|ACA09908.1| NADH dehydrogenase subunit J [Ficus abutilifolia]
gi|167889349|gb|ACA09909.1| NADH dehydrogenase subunit J [Ficus glumosa]
gi|167889351|gb|ACA09910.1| NADH dehydrogenase subunit J [Ficus glumosa]
gi|167889353|gb|ACA09911.1| NADH dehydrogenase subunit J [Ficus glumosa]
Length = 112
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V I+ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|323698262|ref|ZP_08110174.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio sp.
ND132]
gi|323458194|gb|EGB14059.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
desulfuricans ND132]
Length = 175
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
S+ + G +V L + ++ D+ L F V YHF N R+ ++
Sbjct: 26 SVFLAPGQIVKAARKLYEAE----YSLEDIFA---LDVEEGFLVQYHFNRWTINERVVLR 78
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD-YGFEGHPLRKD 147
+ + V IV ++ GA+W ERE D +G+ FEGHP+L +L + PLRK
Sbjct: 79 VLIGRDNPVIPSIVSVFSGAEWHERETRDFHGVVFEGHPNLVPLLVAVEDVDLCPLRKS 137
>gi|167889379|gb|ACA09924.1| NADH dehydrogenase subunit J [Heteromorpha arborescens]
gi|167889381|gb|ACA09925.1| NADH dehydrogenase subunit J [Heteromorpha arborescens]
gi|167889383|gb|ACA09926.1| NADH dehydrogenase subunit J [Heteromorpha arborescens]
Length = 112
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYI---YGYNYLRSQCAYDVAPGGLLASVYHLTRMEYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FAPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|171189222|gb|ACB42097.1| NADH dehydrogenase subunit J [Sophronitis caulescens]
Length = 127
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + CF D+ FL+ + K
Sbjct: 13 TLQIKTEDWDFITVISYVYGYNYLCFQCAYDVSPGGFLAGVYHL-TKIRYGIDKPGEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
A PSI I+ D+ ERE +DM GI +E HP L+RIL + G PL
Sbjct: 72 KGFAPRSNPQTPSIFWIWRSVDFKERESYDMLGISYENHPCLKRILMPESWIGWPL 127
>gi|167889313|gb|ACA09891.1| NADH dehydrogenase subunit J [Croton gratissimus]
gi|167889315|gb|ACA09892.1| NADH dehydrogenase subunit J [Croton gratissimus]
gi|167889319|gb|ACA09894.1| NADH dehydrogenase subunit J [Croton megalobotrys]
gi|167889321|gb|ACA09895.1| NADH dehydrogenase subunit J [Croton megalobotrys]
gi|167889323|gb|ACA09896.1| NADH dehydrogenase subunit J [Croton megalobotrys]
gi|167889325|gb|ACA09897.1| NADH dehydrogenase subunit J [Croton pseudopulchellus]
gi|167889327|gb|ACA09898.1| NADH dehydrogenase subunit J [Croton pseudopulchellus]
gi|167889329|gb|ACA09899.1| NADH dehydrogenase subunit J [Croton pseudopulchellus]
Length = 112
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQSAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ AD+ ERE +DM GIF++ HP L+RIL + G PLR
Sbjct: 58 FAPRTNPRIPSVFWVWKSADFQERESYDMLGIFYDNHPRLKRILMPESWAGWPLR 112
>gi|307825299|ref|ZP_07655519.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methylobacter
tundripaludum SV96]
gi|307733755|gb|EFO04612.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methylobacter
tundripaludum SV96]
Length = 524
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 51/142 (35%), Gaps = 11/142 (7%)
Query: 14 NSFSGSVRFAVNSVGELSLD-VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRF 72
+ S + A +L + L + + + + +
Sbjct: 12 SRLSTDITVAEIDTASATLWQIKSHAWQQFAE-LAMQQNLRW-------AAGWAEQVDNR 63
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132
++ + L I +PS +YP A+ ER DM+GI F GHPD RR
Sbjct: 64 FLINACFEKQGEYILLRTIIDDSNPELPSQATVYPAANRSERHTQDMFGIKFVGHPDNRR 123
Query: 133 ILTDYGFEG--HPLRKDFPVTG 152
+ +PLRKDFPV G
Sbjct: 124 WTRHQAWIEKNYPLRKDFPVQG 145
>gi|89895861|ref|YP_519348.1| formate hydrogenlyase subunit 5 precursor [Desulfitobacterium
hafniense Y51]
gi|89335309|dbj|BAE84904.1| formate hydrogenlyase subunit 5 precursor [Desulfitobacterium
hafniense Y51]
Length = 554
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 27 VGELSLDVDCGDLVSLCS--FLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYN 84
E + + L + +L+ ++ G D S + F + P
Sbjct: 32 KNEGLVWLKPACLPEVMEQLWLKVPSR---PLLMTHVGNDERSLGHGFVIYLLLHFPGDF 88
Query: 85 RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--H 142
A KS PS+ + P +W EREV D+ G+ +GHPD R ++ G+ G +
Sbjct: 89 T--LTLGARGIEKSFPSLTLLCPALNWPEREVRDLLGLHPDGHPDPRPLVLHPGWTGGFY 146
Query: 143 PLRK 146
PLRK
Sbjct: 147 PLRK 150
>gi|167889429|gb|ACA09949.1| NADH dehydrogenase subunit J [Steganotaenia araliacea]
gi|167889431|gb|ACA09950.1| NADH dehydrogenase subunit J [Steganotaenia araliacea]
gi|167889433|gb|ACA09951.1| NADH dehydrogenase subunit J [Steganotaenia araliacea]
Length = 112
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYI---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ D+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 58 FAPRRNPRIPSVFWVWKSVDFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|167889436|gb|ACA09952.1| NADH dehydrogenase subunit J [Strychnos decussata]
gi|167889438|gb|ACA09953.1| NADH dehydrogenase subunit J [Strychnos decussata]
gi|167889440|gb|ACA09954.1| NADH dehydrogenase subunit J [Strychnos decussata]
gi|167889442|gb|ACA09955.1| NADH dehydrogenase subunit J [Strychnos madagascariensis]
gi|167889444|gb|ACA09956.1| NADH dehydrogenase subunit J [Strychnos madagascariensis]
gi|167889446|gb|ACA09957.1| NADH dehydrogenase subunit J [Strychnos madagascariensis]
gi|167889448|gb|ACA09958.1| NADH dehydrogenase subunit J [Strychnos spinosa]
gi|167889450|gb|ACA09959.1| NADH dehydrogenase subunit J [Strychnos spinosa]
gi|167889452|gb|ACA09960.1| NADH dehydrogenase subunit J [Strychnos spinosa]
Length = 112
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|171189208|gb|ACB42092.1| NADH dehydrogenase subunit J [Cattleya wallisii]
Length = 129
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCSYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
A + ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 91 SAYFKERESYDMLGISYENHPRLKRILMPESWIGWPLRK 129
>gi|167889331|gb|ACA09900.1| NADH dehydrogenase subunit J [Faurea rochetiana]
gi|167889333|gb|ACA09901.1| NADH dehydrogenase subunit J [Faurea rochetiana]
gi|167889335|gb|ACA09902.1| NADH dehydrogenase subunit J [Faurea rochetiana]
gi|167889337|gb|ACA09903.1| NADH dehydrogenase subunit J [Faurea saligna]
gi|167889339|gb|ACA09904.1| NADH dehydrogenase subunit J [Faurea saligna]
gi|167889341|gb|ACA09905.1| NADH dehydrogenase subunit J [Faurea saligna]
Length = 112
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVK 90
D S+ + + C D V + + +
Sbjct: 1 KPEDWHSIAVI---SYVYGYNYLRSQCAYDVAPGGPLASVYHLTRIQYGVDQPEEVCIKV 57
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FASRRNPKIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|164513050|emb|CAP11618.1| NADH dehydrogenase subunit J [Rhynchostele cordata]
Length = 113
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKI 91
D S+ + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 58 FASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 113
>gi|164513030|emb|CAP11608.1| NADH dehydrogenase subunit J [Phylica arborea]
gi|164513032|emb|CAP11609.1| NADH dehydrogenase subunit J [Phylica paniculata]
Length = 113
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVK 90
+ D S+ L + + C D V + + +K
Sbjct: 2 IKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIK 58
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 59 VFAPRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPL 113
>gi|167889212|gb|ACA09844.1| NADH dehydrogenase subunit J [Epidendrum pseudepidendrum]
Length = 112
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + S + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRSSIDKPEEVCIKVFAPRSNSXTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|22002571|gb|AAM82722.1| NugC [Synechococcus elongatus PCC 7942]
Length = 181
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 14/143 (9%)
Query: 21 RFAVNSVGEL---SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYH 77
L + VD L+ + + L F + G D + +
Sbjct: 17 ENTALERDHLGVEIVQVDREVLLPIAAAL---FAYGFNYLQCQGGYDLGPGQDLVSFYHL 73
Query: 78 FL-----SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD-LR 131
S R++V + VPS+ I+ GADW ERE +DMYGI FEGHP
Sbjct: 74 TKVSDDASQPQEVRVKVFLP-RHDPKVPSVFWIWKGADWQERETFDMYGIQFEGHPKPPS 132
Query: 132 RILTDYGFEGH-PLRKDFPVTGF 153
IL G PLRK +T F
Sbjct: 133 GILMPERLGGFGPLRKGLYLTRF 155
>gi|167889173|gb|ACA09833.1| NADH dehydrogenase subunit J [Rhynchostele beloglossa]
Length = 112
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KAEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FASRSNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|164452432|gb|ABY57057.1| NADH dehydrogenase subunit J [Asplenium trichomanes subsp.
trichomanes]
Length = 125
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+ V D +S+ F + C D + V + P + +
Sbjct: 13 TXQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
KI V +PS+ ++ +D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 CTKIFVPRKDPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 125
>gi|320161605|ref|YP_004174830.1| putative NADH dehydrogenase [Anaerolinea thermophila UNI-1]
gi|319995459|dbj|BAJ64230.1| putative NADH dehydrogenase [Anaerolinea thermophila UNI-1]
Length = 158
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS- 67
IV +V A L + + +L+ + L+D + + + G+D+
Sbjct: 10 AKKIVE--PFAVEMASPDPWRLDVVILPANLIPVLQALKD---AHWGYLSAITGLDYPPA 64
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ + L +++ V + S+ +YP A +ERE+ +M+G +G
Sbjct: 65 DGQEGQLEALYHLVMNGVVLTIRVKVPYAHPELESVCQVYPAASLYERELMEMFGFVLKG 124
Query: 127 HPDLRRILTDYGFE--GHPLRKDF 148
P R+L + +PLRK F
Sbjct: 125 TPSTERLLLADDWPQGVYPLRKSF 148
>gi|151367632|gb|ABS10584.1| NADH dehydrogenase subunit J [Schisandra bicolor]
Length = 127
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L + D +++ S++ + D+ L+ + +
Sbjct: 3 TLQIKPEDWYSIAVISYVYGYNYLRXXCAYDVAPGGLLASVYHL-TRIQYGVDQPEEVCI 61
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
A PS+ I+ AD+ ERE +DM GI ++ L+RIL + G PLRKD+
Sbjct: 62 KVFAQRRNPRTPSVFWIWKSADFQERESYDMVGISYDNXXRLKRILMPESWIGXPLRKDY 121
>gi|164452513|gb|ABY57095.1| NADH dehydrogenase subunit J [Ombronesus stuvensis]
Length = 125
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVSPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 125
>gi|171189138|gb|ACB42059.1| NADH dehydrogenase subunit J [Cattleya amethystoglossa]
gi|171189146|gb|ACB42063.1| NADH dehydrogenase subunit J [Cattleya bicolor]
Length = 129
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
AD+ ERE +DM GI +E HP L+RIL + G PLRK
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPLRK 129
>gi|164513048|emb|CAP11617.1| NADH dehydrogenase subunit J [Rhynchostele bictoniensis]
Length = 113
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ + V I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFTSRRNPRIPSVFWIWK 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
AD+ ERE +DM GI ++ HP L+RIL + G PLRK
Sbjct: 75 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRK 113
>gi|167889287|gb|ACA09878.1| NADH dehydrogenase subunit J [Bonatea speciosa]
Length = 112
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFALRSNPKTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|164452527|gb|ABY57102.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
Length = 122
Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 122
>gi|164452482|gb|ABY57081.1| NADH dehydrogenase subunit J [Euptychium setigerum]
gi|164452492|gb|ABY57085.1| NADH dehydrogenase subunit J [Garovaglia elegans subsp.
dietrichiae]
Length = 122
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 122
>gi|164452474|gb|ABY57077.1| NADH dehydrogenase subunit J [Euptychium cuspidatum]
Length = 123
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 11 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 67
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 68 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 123
>gi|164452559|gb|ABY57118.1| NADH dehydrogenase subunit J [Ptychomnion densifolium]
gi|164452567|gb|ABY57122.1| NADH dehydrogenase subunit J [Ptychomnion falcatulum]
Length = 122
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRKKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 122
>gi|164452470|gb|ABY57075.1| NADH dehydrogenase subunit J [Cladomnion ericoides]
Length = 122
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGIYYENHPRLKRILMPDTWIGW 122
>gi|164452468|gb|ABY57074.1| NADH dehydrogenase subunit J [Cladomniopsis crenatoobtusa]
Length = 123
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 11 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKIQNNADQPEEI 67
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 68 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 123
>gi|164452487|gb|ABY57083.1| NADH dehydrogenase subunit J [Garovaglia baeuerlenii]
Length = 124
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 12 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 68
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 69 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 124
>gi|167889217|gb|ACA09846.1| NADH dehydrogenase subunit J [Gongora amparoana]
gi|167889219|gb|ACA09847.1| NADH dehydrogenase subunit J [Gongora cornuta]
gi|167889221|gb|ACA09848.1| NADH dehydrogenase subunit J [Gongora horichiana]
Length = 112
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
+++ S++ + D+ FL+ + K + +
Sbjct: 8 IAVISYVYGYNYLRSQCAYDVTPGGFLASVYHL-TKIRYGIDKPEEVCIKVFSPRSNPQI 66
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 67 PSVFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|167889387|gb|ACA09928.1| NADH dehydrogenase subunit J [Hyphaene coriacea]
gi|167889389|gb|ACA09929.1| NADH dehydrogenase subunit J [Hyphaene coriacea]
gi|167889391|gb|ACA09930.1| NADH dehydrogenase subunit J [Hyphaene coriacea]
gi|167889393|gb|ACA09931.1| NADH dehydrogenase subunit J [Hyphaene coriacea]
gi|167889395|gb|ACA09932.1| NADH dehydrogenase subunit J [Hyphaene petersiana]
gi|167889397|gb|ACA09933.1| NADH dehydrogenase subunit J [Hyphaene petersiana]
Length = 112
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYP 107
+ + C D V + + +K+ V + + S+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGVDKPEEVCIKVFVPKNNPRISSVFWIWK 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|164452504|gb|ABY57091.1| NADH dehydrogenase subunit J [Glyphothecium sciuroides]
gi|164452519|gb|ABY57098.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
gi|164452523|gb|ABY57100.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
gi|164452525|gb|ABY57101.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
gi|164452529|gb|ABY57103.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
gi|164452531|gb|ABY57104.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
Length = 125
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 125
>gi|166092882|gb|ABY82399.1| NADH dehydrogenase subunit J [Heliosperma alpestre]
Length = 55
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD+ ERE +DM+GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 WKSADFQERESYDMFGISYDNHPRLKRILMPESWVGWPLRKDYIVPNFFEIQ 52
>gi|164452455|gb|ABY57068.1| NADH dehydrogenase subunit J [Tortella humilis]
Length = 125
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S L F + C D V + + +
Sbjct: 13 ILQIRSENWLSTAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PS+ I+ AD+ ERE +DM+GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMFGISYENHPRLKRILMPDTWIGW 125
>gi|164452490|gb|ABY57084.1| NADH dehydrogenase subunit J [Garovaglia compressa]
Length = 125
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 125
>gi|167889267|gb|ACA09868.1| NADH dehydrogenase subunit J [Trichopilia turialbae]
Length = 112
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPKTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYDNHPRLKRILMPENWIGWPLR 112
>gi|164452565|gb|ABY57121.1| NADH dehydrogenase subunit J [Ptychomnion densifolium]
Length = 124
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 12 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 68
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 69 CIKIFVSRKKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDSWIGW 124
>gi|164452533|gb|ABY57105.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452535|gb|ABY57106.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452537|gb|ABY57107.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452539|gb|ABY57108.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452541|gb|ABY57109.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452545|gb|ABY57111.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452549|gb|ABY57113.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452551|gb|ABY57114.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452555|gb|ABY57116.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452569|gb|ABY57123.1| NADH dehydrogenase subunit J [Ptychomnion subaciculare]
gi|164452571|gb|ABY57124.1| NADH dehydrogenase subunit J [Ptychomnion subaciculare]
gi|164452573|gb|ABY57125.1| NADH dehydrogenase subunit J [Ptychomnion subaciculare]
gi|164452575|gb|ABY57126.1| NADH dehydrogenase subunit J [Ptychomnion subaciculare]
Length = 125
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRKKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 125
>gi|164452464|gb|ABY57072.1| NADH dehydrogenase subunit J [Racopilum cuspidigerum]
Length = 125
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIKNNADQPEEI 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V + +PS+ I+ AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 70 CIKIFVSRQNPKIPSVFWIWKSADFQERESYDMLGIYYENHPRLKRILMPDXWIGW 125
>gi|167889264|gb|ACA09867.1| NADH dehydrogenase subunit J [Trichopilia tortilis]
Length = 112
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Query: 35 DCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D +++ S++ + D+ L+ + K A
Sbjct: 1 KPEDWDSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TKIRYGIDKPEEVCIKVFA 59
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+PS+ I+ AD+ ERE +DM GI+++ HP L+RIL + G PLR
Sbjct: 60 PRSNPKIPSVFWIWRSADFQERESYDMLGIYYDNHPCLKRILMPESWIGWPLR 112
>gi|164452515|gb|ABY57096.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
Length = 121
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIG 121
>gi|164452547|gb|ABY57112.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
Length = 125
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRKKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 125
>gi|164452476|gb|ABY57078.1| NADH dehydrogenase subunit J [Euptychium dumosum]
Length = 122
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWMGW 122
>gi|164452484|gb|ABY57082.1| NADH dehydrogenase subunit J [Euptychium vitiense]
Length = 122
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWMGW 122
>gi|164452472|gb|ABY57076.1| NADH dehydrogenase subunit J [Dichelodontium nitidum]
Length = 122
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 11 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 67
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 68 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIG 122
>gi|164452450|gb|ABY57066.1| NADH dehydrogenase subunit J [Tortella bambergeri]
Length = 122
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIRSENWLSIAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIQBNADQPEEI 66
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V + +PS+ I+ AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 67 CIKIFVSRQNPKIPSVFWIWKSADFQERESYDMLGIYYENHPRLKRILMPDTWIGW 122
>gi|164513010|emb|CAP11598.1| NADH dehydrogenase subunit J [Muraltia aspalatha]
Length = 119
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVK 90
+ GD S+ L + + C D V + + +R+K
Sbjct: 1 IKPGDWDSVAIIL---YAYGYNYLRAQCAYDVAPGGLLASVYHLAKIESGIDQSEEVRIK 57
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ V V ++ AD+ ERE +DM GI ++ HP +RIL + G P K
Sbjct: 58 VFVPRKNPRIPSVFWVWKSADFQERESYDMLGIHYDNHPRPKRILMPESWVGWPYVK 114
>gi|255961308|ref|YP_003097490.1| NADH dehydrogenase subunit J [Selaginella moellendorffii]
gi|254941480|gb|ACT88995.1| NADH dehydrogenase subunit J [Selaginella moellendorffii]
Length = 174
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 87 LRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
L +K++V++ V + AD ERE +DM GIF E HP L+RI + G PLR
Sbjct: 99 LCIKVSVSKKHPRIPSVFRVRKSADLQERESYDMLGIFHESHPRLKRISMPDTWIGRPLR 158
Query: 146 KDFPVTGFVE 155
KD V F E
Sbjct: 159 KDHTVPDFYE 168
>gi|167889179|gb|ACA09836.1| NADH dehydrogenase subunit J [Brassavola nodosa]
Length = 112
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIYYENHPRLKRILMPESWIGWPLR 112
>gi|164452426|gb|ABY57054.1| NADH dehydrogenase subunit J [Asplenium viride]
Length = 124
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V + P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSSPGGSLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
KI V +PS+ ++ +D ERE +DM GI +EGHP L RIL + G
Sbjct: 70 CTKIFVPRKDPKIPSVYWVWKSSDLQERESYDMLGIIYEGHPHLSRILMPDSWIG 124
>gi|166092879|gb|ABY82397.1| NADH dehydrogenase subunit J [Silene atocioides]
Length = 56
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 2 WKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 53
>gi|302824535|ref|XP_002993910.1| hypothetical protein SELMODRAFT_137685 [Selaginella moellendorffii]
gi|302824541|ref|XP_002993913.1| hypothetical protein SELMODRAFT_137812 [Selaginella moellendorffii]
gi|300138277|gb|EFJ05051.1| hypothetical protein SELMODRAFT_137685 [Selaginella moellendorffii]
gi|300138280|gb|EFJ05054.1| hypothetical protein SELMODRAFT_137812 [Selaginella moellendorffii]
Length = 235
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 87 LRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
L +K++V++ V + AD ERE +DM GIF E HP L+RI + G PLR
Sbjct: 98 LCIKVSVSKKHPRIPSVFRVRKSADLQERESYDMLGIFHESHPRLKRISMPDTWIGRPLR 157
Query: 146 KDFPVTGFVE 155
KD V F E
Sbjct: 158 KDHTVPDFYE 167
>gi|167889200|gb|ACA09842.1| NADH dehydrogenase subunit J [Cranichis ciliilabia]
Length = 112
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRSGIDKPEEVCIKVFAPRSNPKTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIYYENHPRLKRILMPESWIGWPLR 112
>gi|296399241|gb|ADH10416.1| NADH-plastoquinone oxidoreductase subunit J [Selaginella
moellendorffii]
Length = 173
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 87 LRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
L +K++V++ V + AD ERE +DM GIF E HP L+RI + G PLR
Sbjct: 99 LCIKVSVSKKHPRIPSVFRVRKSADLQERESYDMLGIFHESHPRLKRISMPDTWIGRPLR 158
Query: 146 KDFPVTGFVE 155
KD V F E
Sbjct: 159 KDHTVPDFYE 168
>gi|128863|sp|P15601|NDUS3_PARPR RecName: Full=NADH-ubiquinone oxidoreductase subunit 9; AltName:
Full=Protein P1
gi|1019637|gb|AAA79263.1| P1 protein [Paramecium primaurelia]
Length = 209
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 10/156 (6%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS----------NR 71
S + +L S L + +++ D +
Sbjct: 46 STTVSPNHYVCVLPAAASQALASVLGGELFLGKSQLVEATAFDLTGQEVAAGDFLVFLKN 105
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
+V + + + R+ + G+ V S+ Y A+W ERE+ +M+G+ + D R
Sbjct: 106 NGIVLSYSFYFFLLKKRITFFLHGGEKVCSVEAFYSNANWLEREISEMFGVSYLLKKDSR 165
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVY 167
+L DYG +P K FP TG E+ ++ +K Y
Sbjct: 166 NLLLDYGSSFNPFLKKFPSTGHTEVVFNSFLKTTAY 201
>gi|167889289|gb|ACA09879.1| NADH dehydrogenase subunit J [Brachylaena huillensis]
gi|167889291|gb|ACA09880.1| NADH dehydrogenase subunit J [Brachylaena huillensis]
gi|167889293|gb|ACA09881.1| NADH dehydrogenase subunit J [Brachylaena huillensis]
Length = 112
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
GD S+ L + + C D V + + +K+
Sbjct: 1 KPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V ++ D+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|164452494|gb|ABY57086.1| NADH dehydrogenase subunit J [Garovaglia elegans subsp. elegans]
Length = 125
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIG 124
>gi|166092867|gb|ABY82389.1| NADH dehydrogenase subunit J [Lychnis flos-jovis]
gi|166239981|gb|ABY86509.1| NADH dehydrogenase subunit J [Lychnis chalcedonica]
Length = 55
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 WKSADFQERESYDMLGISYDNHPRLKRILMPDSWVGWPLRKDYIVPNFYEIQ 52
>gi|167889236|gb|ACA09854.1| NADH dehydrogenase subunit J [Oncidium storkii]
Length = 112
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVSPGGLLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
A + ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 75 SAYFQERESYDMLGILYDNHPRLKRILMPESWIGWPLR 112
>gi|167889223|gb|ACA09849.1| NADH dehydrogenase subunit J [Isochilus amparoanus]
Length = 112
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + + + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDQSEEVCIKVFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIHYENHPRLKRILMPESWIGWPLR 112
>gi|167889227|gb|ACA09850.1| NADH dehydrogenase subunit J [Lycaste macrophylla]
Length = 112
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHFTKIGSGIDKPEEVCIKVFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|166092845|gb|ABY82375.1| NADH dehydrogenase subunit J [Silene zawadskii]
gi|166092862|gb|ABY82386.1| NADH dehydrogenase subunit J [Silene sordida]
gi|166092870|gb|ABY82391.1| NADH dehydrogenase subunit J [Silene pseudoatocion]
gi|166092876|gb|ABY82395.1| NADH dehydrogenase subunit J [Silene aegyptiaca]
gi|166092888|gb|ABY82403.1| NADH dehydrogenase subunit J [Atocion rupestre]
gi|166092891|gb|ABY82405.1| NADH dehydrogenase subunit J [Viscaria vulgaris]
gi|166092894|gb|ABY82407.1| NADH dehydrogenase subunit J [Petrocoptis pyrenaica]
Length = 55
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 WKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 52
>gi|164452511|gb|ABY57094.1| NADH dehydrogenase subunit J [Hampeella pallens]
Length = 125
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 125
>gi|164452466|gb|ABY57073.1| NADH dehydrogenase subunit J [Spiridens camusii]
Length = 125
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVALYVH---GFNYLRSQCAYDVAPGGLLASVYHFTKIKNNADQPEEI 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V + +PS+ I+ AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 70 CIKIFVSRQNPKIPSVFWIWKSADFQERESYDMLGIYYEHHPRLKRILMPDTWIGW 125
>gi|167889253|gb|ACA09862.1| NADH dehydrogenase subunit J [Prosthechea radiata]
gi|167889259|gb|ACA09865.1| NADH dehydrogenase subunit J [Stanhopea saccata]
gi|167889261|gb|ACA09866.1| NADH dehydrogenase subunit J [Stanhopea saccata]
Length = 112
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K + +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFSSRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIYYENHPRLKRILMPESWIGWPLR 112
>gi|166092856|gb|ABY82382.1| NADH dehydrogenase subunit J [Silene latifolia]
Length = 57
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 104 GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
++ AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 WVWKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 54
>gi|167889255|gb|ACA09863.1| NADH dehydrogenase subunit J [Sarcoglottis smithii]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRSGIDKPEEVCIKVFTPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|167889240|gb|ACA09856.1| NADH dehydrogenase subunit J [Ponthieva racemosa]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + S + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIGSSIDKPEEVCIKVFAPRSNSKTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
AD+ ERE +DM GI +E HP L+RIL + G PL
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPL 111
>gi|154819567|gb|ABS88068.1| NADH dehydrogenase subunit J [Sabal minor]
Length = 127
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRL 87
+ + D S+ + + C D V + +
Sbjct: 3 TXXIKXEDWYSIAVI---SYVYGYNYLRSXCAYDVAPGGFLASVYHLTRIQYGVDKPEEV 59
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+K+ V + + S+ I+ AD+ ERE +DM GI ++ L+RIL + G PLRK
Sbjct: 60 CIKVFVPKNNPRISSVFWIWKSADFQERESYDMLGISYDNXXRLKRILMPESWIGWPLRK 119
Query: 147 DF 148
D+
Sbjct: 120 DY 121
>gi|167889196|gb|ACA09841.1| NADH dehydrogenase subunit J [Coeliopsis hyacinthosma]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K + +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFSPRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|164452462|gb|ABY57071.1| NADH dehydrogenase subunit J [Orthorrhynchium elegans]
Length = 125
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDSWIGW 125
>gi|167889202|gb|ACA09843.1| NADH dehydrogenase subunit J [Cyclopogon comosus]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRSGIDKPEEVCIKVFTPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIYYENHPRLKRILMPESWIGWPLR 112
>gi|268324502|emb|CBH38090.1| F420H2-quinone oxidoreductase, subunit BCD fusion [uncultured
archaeon]
Length = 772
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 68/171 (39%), Gaps = 20/171 (11%)
Query: 6 EDLGDYIVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
++L + + +G + +++ +L ++ L+D ++ + ++
Sbjct: 201 KELKENLKRDLNGLYESITITGTNSIAIKTTRENLKAVAGKLKD--QMKVDHVKSVNVIE 258
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAV-----AEGKSVPSIVGIYPGADWFEREVWDM 119
+F V Y S + V I V + V S+ I+ A++ ERE+ +
Sbjct: 259 VP-HERKFIVEYIASSYTDEALMPVLITVFTEVGLKDPKVDSLSSIWESANYSEREMHEF 317
Query: 120 YGIFFEGHPDL-RRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRP 169
+G+ F+G+ + R+ + PLRK+F + E Y VY
Sbjct: 318 FGVLFDGNKGMGRKFVLAPDTPDLPLRKEFKIP---EERY-------VYEK 358
>gi|166092865|gb|ABY82388.1| NADH dehydrogenase subunit J [Lychnis flos-cuculi]
Length = 55
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ D+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 WKSVDFQERESYDMLGISYDNHPRLKRILMPDSWVGWPLRKDYIVPNFYEIQ 52
>gi|167889249|gb|ACA09860.1| NADH dehydrogenase subunit J [Prosthechea radiata]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K + +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFSPRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIYYENHPRLKRILMPESWIGWPLR 112
>gi|167889309|gb|ACA09889.1| NADH dehydrogenase subunit J [Combretum hereroense]
Length = 111
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 7/114 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
V ++ AD+ ERE +DM GI ++ HP L+RIL + G PL
Sbjct: 58 FAPRSNPRIPSVFWVWKSADFQERESYDMLGICYDNHPRLKRILMPESWIGWPL 111
>gi|167889181|gb|ACA09837.1| NADH dehydrogenase subunit J [Brassia arcuigera]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D + + + +K+
Sbjct: 1 KPEDXHSIAVILYV---YGYNYLRSQCAYDVAPGGLLGSIYHLTRIEYGIDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FASRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|254168126|ref|ZP_04874973.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
gi|197622892|gb|EDY35460.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
Length = 165
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 6/154 (3%)
Query: 9 GDYIVNSFSGSVRFAVNSVGEL---SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ I L +V L ++ F + + L +D+
Sbjct: 3 AEQIFKELGVEFEKLKVKGNTLPRYKAEVKPEKLEDAIIKFKNS---GFNHFVALSCIDW 59
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ V + F + ++ ++P + +ERE+ +M+G+ FE
Sbjct: 60 IKDEKFELVYHLFSYEEREDVFLSIFLPRNEPKYRTLRHLFPQIETYEREIHEMFGVEFE 119
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
G+ L + + E P+RKDF + Y+
Sbjct: 120 GNDRLGEFILEDWNEMPPMRKDFDTVKYAREKYE 153
>gi|167889232|gb|ACA09852.1| NADH dehydrogenase subunit J [Diodonopsis erinacea]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS I+
Sbjct: 15 YGYNYLRSQCAYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQTPSAFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|167889175|gb|ACA09834.1| NADH dehydrogenase subunit J [Arpophyllum giganteum]
Length = 112
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIYYENHPRLKRILMPESWIGWPLR 112
>gi|264684011|emb|CAP46257.1| NADH dehydrogenase [Araucaria bernieri]
gi|264684013|emb|CAP46258.1| NADH dehydrogenase [Araucaria biramulata]
gi|264684015|emb|CAP46259.1| NADH dehydrogenase [Araucaria columnaris]
gi|264684021|emb|CAP46262.1| NADH dehydrogenase [Araucaria hunsteinii]
gi|264684065|emb|CAP46284.1| NADH dehydrogenase [Mannia androgyna]
gi|264684067|emb|CAP46285.1| NADH dehydrogenase [Mannia californica]
gi|264684069|emb|CAP46286.1| NADH dehydrogenase [Plagiochasma rupestre]
gi|264684071|emb|CAP46287.1| NADH dehydrogenase [Asterella khasyana]
gi|264684075|emb|CAP46289.1| NADH dehydrogenase [Asterella macropoda]
gi|264684077|emb|CAP46290.1| NADH dehydrogenase [Asterella bolanderi]
gi|264684079|emb|CAP46291.1| NADH dehydrogenase [Asterella mussuriensis]
gi|264684085|emb|CAP46294.1| NADH dehydrogenase [Reboulia hemisphaerica]
gi|264684091|emb|CAP46297.1| NADH dehydrogenase [Mannia androgyna]
Length = 117
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 62
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 63 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIG 117
>gi|164452557|gb|ABY57117.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
Length = 110
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVK 90
+ + +S+ L F + C D V + + + +K
Sbjct: 1 IKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEICIK 57
Query: 91 IAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
I V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 58 IFVSRKKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 110
>gi|164513058|emb|CAP11622.1| NADH dehydrogenase subunit J [Sorbus rupicola]
Length = 111
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVK 90
+ D S+ L + + C D V + + +K
Sbjct: 1 IKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIK 57
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
+ + V ++ AD+ ERE +DM GI ++ HP L+RIL + G P
Sbjct: 58 VFASRRNPRIPSVFWVWKSADFQERESYDMLGILYDNHPRLKRILMPESWIGWP 111
>gi|264684093|emb|CAP46298.1| NADH dehydrogenase [Mannia androgyna]
Length = 117
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 62
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 63 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPDSWIG 117
>gi|167889230|gb|ACA09851.1| NADH dehydrogenase subunit J [Diodonopsis erinacea]
Length = 112
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + + +K+ PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHFTKIRYGIDKPEEVCIKVFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|254167945|ref|ZP_04874793.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
gi|289596053|ref|YP_003482749.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aciduliprofundum
boonei T469]
gi|197622988|gb|EDY35555.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
gi|289533840|gb|ADD08187.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aciduliprofundum
boonei T469]
Length = 165
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 6/154 (3%)
Query: 9 GDYIVNSFSGSVRFAVNSVGEL---SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ I L +V L ++ F + + L +D+
Sbjct: 3 AEQIFKELGVEFEKLKVKGNTLPRYKAEVKPEKLEDAIIKFKNS---GFNHFVALSCIDW 59
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ V + F ++ ++P + +ERE+++M+G+ FE
Sbjct: 60 IKDEKFELVYHLFSYEDSEDVFLSIFLPRNEPKYRTLRHLFPQIETYEREIYEMFGVEFE 119
Query: 126 GHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYD 159
G+ L + + E P+RKDF + Y+
Sbjct: 120 GNDRLGEFILEDWNEMPPMRKDFDTVKYAREKYE 153
>gi|164452446|gb|ABY57064.1| NADH dehydrogenase subunit J [Pleurochaete luteola]
gi|164452458|gb|ABY57069.1| NADH dehydrogenase subunit J [Tortella nitida]
Length = 125
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S L F + C D V + + +
Sbjct: 13 ILQIRSENWLSTAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIQDNADQPEEI 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V + +PSI I+ AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 70 CIKIFVSRQNPKIPSIFWIWKSADFQERESYDMLGIYYENHPRLKRILMPDTWIGW 125
>gi|95928468|ref|ZP_01311216.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Desulfuromonas
acetoxidans DSM 684]
gi|95135739|gb|EAT17390.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Desulfuromonas
acetoxidans DSM 684]
Length = 171
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 32 LDVDCGDLVSL-CSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
L V L L+D ++DL V + +VVY F + R+ +
Sbjct: 31 LSVTGDKLRDFAMQMLKD-----GFYLVDLMAVHV---NPAVEVVYQFAHVETRCRVMAR 82
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR-ILTDYGFEGHPLRKD 147
V E +P+I IY GA+W ERE D +G+ F GHP+L IL + + PL K
Sbjct: 83 AFVNEKSELPTIADIYHGANWHERETRDFHGVVFVGHPNLEPLILAEEDVDLKPLLKS 140
>gi|167889456|gb|ACA09962.1| NADH dehydrogenase subunit J [Xerophyta retinervis]
gi|167889458|gb|ACA09963.1| NADH dehydrogenase subunit J [Xerophyta retinervis]
gi|167889460|gb|ACA09964.1| NADH dehydrogenase subunit J [Xerophyta retinervis]
Length = 112
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPEEVCIKVFAPRSNPRIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI+++ HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGIYYDNHPRLKRILMPESWIGWPLR 112
>gi|167889171|gb|ACA09832.1| NADH dehydrogenase subunit J [Acostaea costaricensis]
Length = 112
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAV-AEGKSVPSIVGIYP 107
+ + C D V + + +K+ +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRXGIDKPEEVCIKVFAXRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|167889244|gb|ACA09858.1| NADH dehydrogenase subunit J [Prosthechea cochleata]
Length = 112
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|164452577|gb|ABY57127.1| NADH dehydrogenase subunit J [Ptychomniella ptychocarpa]
Length = 122
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSISVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKIQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 122
>gi|198279083|emb|CAP04575.1| NADH dehydrogenase subunit J [Equisetum giganteum]
gi|198279087|emb|CAP04577.1| NADH dehydrogenase subunit J [Equisetum myriochaetum]
Length = 124
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP+L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYENHPNLKRILMPDTWIG 124
>gi|167889423|gb|ACA09946.1| NADH dehydrogenase subunit J [Solanum panduriforme]
gi|167889425|gb|ACA09947.1| NADH dehydrogenase subunit J [Solanum panduriforme]
gi|167889427|gb|ACA09948.1| NADH dehydrogenase subunit J [Solanum panduriforme]
Length = 112
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 7/115 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKI 91
D S+ + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVIFYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ V ++ D+ ERE +DM GI ++ HP L+RIL + G PLR
Sbjct: 58 FASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLR 112
>gi|167889246|gb|ACA09859.1| NADH dehydrogenase subunit J [Prosthechea fragrans]
gi|167889251|gb|ACA09861.1| NADH dehydrogenase subunit J [Prosthechea radiata]
Length = 112
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Query: 40 VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
+++ S++ + D+ FL+ + K A
Sbjct: 8 IAVISYVYGSNYLRSQCAYDVSPGGFLASVYHL-TKIRYGIDKPEEVCIKVFAPRSNPQT 66
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
PS I+ AD+ ERE +DM GI +E HP L+RIL + G PLR
Sbjct: 67 PSAFWIWRSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLR 112
>gi|320100264|ref|YP_004175856.1| NADH-ubiquinone oxidoreductase subunit 49kDa [Desulfurococcus
mucosus DSM 2162]
gi|319752616|gb|ADV64374.1| NADH-ubiquinone oxidoreductase chain 49kDa [Desulfurococcus mucosus
DSM 2162]
Length = 545
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 11/153 (7%)
Query: 1 MVRKIEDLGDY---IVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI 57
M+ + + + + + G ++ + + V LV S L ++
Sbjct: 1 MMPREKAILNKYMQLAEKLGGR---SLVDGDTVHIVVPRESLVKAASTLFNEHGLTHRTC 57
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREV 116
+ G+D + F + + F + +K + G V IV P ADW E+E
Sbjct: 58 V---GIDERPVNGFFSLTHVFTDDSSGLYVLLKTYMESGDPVVPSIVNEVPAADWCEQEA 114
Query: 117 WDMYGIFFEGHPDLRRILTD-YGFEGHPLRKDF 148
D+ GI FEG R +L + + +PLRKDF
Sbjct: 115 MDLLGIRFEGRRRERLVLPPGWPEDAYPLRKDF 147
>gi|167889317|gb|ACA09893.1| NADH dehydrogenase subunit J [Croton gratissimus]
Length = 104
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + D V + + +K+ V ++
Sbjct: 7 YGYNYLRSQSAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAPRTNPRIPSVFWVWK 66
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GIF++ HP L+RIL + G PLR
Sbjct: 67 SADFQERESYDMLGIFYDNHPRLKRILMPESWAGWPLR 104
>gi|164452452|gb|ABY57067.1| NADH dehydrogenase subunit J [Tortella densa]
Length = 125
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + D V + + +
Sbjct: 13 ILQIRSENWLSIAVALYV---YGFNYLRSQSAYDVAPGGLLASVYHFTKIQDNADQPEEI 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V + +PS+ I+ AD+ ERE +DM GIF+E HP L+RIL + G
Sbjct: 70 CIKIFVSRQNPKIPSVFWIWKSADFQERESYDMLGIFYENHPRLKRILMPDTWIGW 125
>gi|166092859|gb|ABY82384.1| NADH dehydrogenase subunit J [Silene cryptoneura]
Length = 53
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 SADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 50
>gi|219670290|ref|YP_002460725.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfitobacterium
hafniense DCB-2]
gi|219540550|gb|ACL22289.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfitobacterium
hafniense DCB-2]
Length = 551
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 9/124 (7%)
Query: 27 VGELSLDVDCGDLVSLCS--FLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYN 84
E + + L + +L+ ++ G D S + F + P
Sbjct: 29 KNEGLVWLKPACLPEVMEQLWLKVPSR---PLLMTHVGNDERSLGHGFVIYLLLQFPGDF 85
Query: 85 RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GH 142
A KS PS+ + P +W EREV D+ G+ +GHPD R ++ G+ +
Sbjct: 86 T--LTLGARGIEKSFPSLTLLCPALNWPEREVRDLLGLHPDGHPDPRPLVLHPGWTEGFY 143
Query: 143 PLRK 146
PLRK
Sbjct: 144 PLRK 147
>gi|167889183|gb|ACA09838.1| NADH dehydrogenase subunit J [Cattleya aurantiaca]
gi|167889187|gb|ACA09840.1| NADH dehydrogenase subunit J [Cattleya skinneri]
Length = 112
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G PLR
Sbjct: 75 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWPLR 112
>gi|198279053|emb|CAP04560.1| NADH dehydrogenase subunit J [Dactylorhiza cordigera]
Length = 126
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 31 SLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + D +++ S++ + D+ FL+ + K
Sbjct: 13 ILQIKTEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCI 71
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
A+ PS+ I+ AD+ ERE +DM GIF++ HP L+RIL + G P
Sbjct: 72 KVFALRSNPKTPSVFWIWRSADFQERESYDMLGIFYDNHPRLKRILMPESWIGWP 126
>gi|264684095|emb|CAP46299.1| NADH dehydrogenase [Mannia californica]
gi|264684097|emb|CAP46300.1| NADH dehydrogenase [Mannia californica]
Length = 117
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 62
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 63 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPXSWIG 117
>gi|288818461|ref|YP_003432809.1| NADH dehydrogenase/hydrogenase large subunit [Hydrogenobacter
thermophilus TK-6]
gi|288787861|dbj|BAI69608.1| NADH dehydrogenase/hydrogenase large subunit [Hydrogenobacter
thermophilus TK-6]
gi|308752051|gb|ADO45534.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Hydrogenobacter
thermophilus TK-6]
Length = 494
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
++ + D + F + Y F + + G PSI + P A +ERE
Sbjct: 25 YLLSIVCSDERALGEDFVIRYFFREEG-----IKVLKLCVGTKFPSITSLCPAAKNYERE 79
Query: 116 VWDMYGIFFEGHPDLRRILT---DYGFEGHPLRKDFP 149
+ DM+G+ EGHPD R ++ ++ HPLRKD+
Sbjct: 80 IRDMFGLVPEGHPDSRSLMLYPENWDPSIHPLRKDYD 116
>gi|88603827|ref|YP_504005.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Methanospirillum
hungatei JF-1]
gi|88189289|gb|ABD42286.1| Membrane bound hydrogenase subunit mbhK [Methanospirillum hungatei
JF-1]
Length = 210
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 56/163 (34%), Gaps = 19/163 (11%)
Query: 1 MVRKI--EDLGDYIVNSFSGSVRFAVNSVGE----------LSLDVDCGDLVSLCSFLRD 48
M + ++L D + F V + + V DL + L
Sbjct: 1 MRATMTPQELADRFIRKFGSRVSNIQVKERREGVKKLPQKTVWMTVSREDLNDAVAEL-- 58
Query: 49 DPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL--SPKYNRRLRVKIAVAEGKSVPSIVGIY 106
+ ++ + D + + F + + VP+I G+
Sbjct: 59 -ISIDYPHLGVIAASDNGDMIDLLYHLQVFFGGKHEEICVVFTVQVPKSDPHVPTISGLI 117
Query: 107 PGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
PGA + ERE DM G+ +G PD RRI F +P RKD
Sbjct: 118 PGAVYSEREKQDMIGVTVDGIPDSRRIFLPDDFPEEIYPWRKD 160
>gi|305664298|ref|YP_003860586.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Ignisphaera
aggregans DSM 17230]
gi|304378867|gb|ADM28706.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Ignisphaera
aggregans DSM 17230]
Length = 150
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 7/146 (4%)
Query: 8 LGDYIVNSFSGSVRFA-VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFL 66
L + + SG + + + + + +L ++ L++ + I + GVD
Sbjct: 3 LPKQLEENLSGYILERGIIKPNRIYIRIASENLKNVVRVLKEFFGDENIYISTIAGVDKP 62
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREVWDMYGIFFE 125
++ Y + VK +V + S++ +PGA E E +D+ GI FE
Sbjct: 63 E-EKVIEINYFIHIIPMGNTIVVKTSVPRDNPIISSLLDEFPGAFSGEAETYDLLGISFE 121
Query: 126 GHPDLRRILTDY----GFEGHPLRKD 147
G+ ++R +PLRKD
Sbjct: 122 GNKYIKRGFFVPKDVADSGIYPLRKD 147
>gi|167889169|gb|ACA09831.1| NADH dehydrogenase subunit J [Aa paleacea]
Length = 112
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V V I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTRIRCGIDKPEEVCIKVFVPRSNPRIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
AD+ ERE +DM GI +E HP L+RIL + G PL
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPL 111
>gi|20093159|ref|NP_619234.1| hydrogenase-3, subunit E (HycE homolog) [Methanosarcina acetivorans
C2A]
gi|19918501|gb|AAM07714.1| hydrogenase-3, subunit E (HycE-like protein) [Methanosarcina
acetivorans C2A]
Length = 545
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 6/150 (4%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M ++L I E+ L + + L + ++I L
Sbjct: 5 MNEDTKELLSTISGIAEEEPELLSARENEIYLKISEAGFEDITPALAE----RKFSLIGL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
+ ++ F + Y F L + + K V S+ GI+P A WFERE+ D +
Sbjct: 61 FCAEVFENTDGFTLFYAFKQAGKASVLVLVREPGKEKRVSSVAGIFPSASWFEREIRDGF 120
Query: 121 GIFFEGHPDLRRILTDYGFE--GHPLRKDF 148
G+ F G D RR+ + HPL+K F
Sbjct: 121 GLDFAGALDNRRLFLHECYHEGFHPLQKAF 150
>gi|164452517|gb|ABY57097.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
Length = 119
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 119
>gi|323156090|gb|EFZ42249.1| hydrogenase-4 component G [Escherichia coli EPECa14]
Length = 463
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRKD 147
PS+ P A W ERE+ DMYG+ G PD RR++ + HPLRKD
Sbjct: 12 FPSVTPRVPAAVWGEREIRDMYGLIPVGLPDHRRLVLPDDWPEDMHPLRKD 62
>gi|164452478|gb|ABY57079.1| NADH dehydrogenase subunit J [Euptychium mucronatum]
Length = 119
Score = 64.6 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 119
>gi|164452553|gb|ABY57115.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452561|gb|ABY57119.1| NADH dehydrogenase subunit J [Ptychomnion densifolium]
Length = 119
Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 67 CIKIFVSRKKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 119
>gi|164512932|emb|CAP11559.1| NADH dehydrogenase subunit J [Cryptocarya alba]
Length = 110
Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 35 DCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D +++ S++ + F D+ S + + A
Sbjct: 1 KPEDWYSIAVISYVYGYNYLRFQCAYDVAP-GGPLASVYHLTRIQYGVDQPEEVCIKVFA 59
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
+PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G P
Sbjct: 60 PRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWP 110
>gi|164512962|emb|CAP11574.1| NADH dehydrogenase subunit J [Fritillaria affinis]
Length = 107
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V V ++
Sbjct: 11 YGYNYLRSQCAYDIAPGGFLASVYHLTRIRYGIDKPEEVCIKVFVPRTNPRIPSVFWVWR 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
AD+ ERE +DM GI + HP L+RIL + G PL
Sbjct: 71 SADFQERESYDMLGISYNNHPRLKRILMPESWIGWPL 107
>gi|198279061|emb|CAP04564.1| NADH dehydrogenase subunit J [Equisetum variegatum]
Length = 124
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYENHPHLKRILMPDTWIG 124
>gi|164452500|gb|ABY57089.1| NADH dehydrogenase subunit J [Garovaglia subelegans]
gi|164452502|gb|ABY57090.1| NADH dehydrogenase subunit J [Garovaglia zantenii]
Length = 122
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVAL---YAYGSNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 67 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 122
>gi|164512934|emb|CAP11560.1| NADH dehydrogenase subunit J [Cryptocarya triplinervis]
Length = 110
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 35 DCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D +++ S++ + F D+ FL+ + + + +K+
Sbjct: 1 KPEDWYSIAVISYVYGYNYLRFQCAYDVAPGGFLAS--VYHLTRIQYGVDQPEEVCIKVF 58
Query: 93 VA-EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
+PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G P
Sbjct: 59 APWRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWP 110
>gi|164452506|gb|ABY57092.1| NADH dehydrogenase subunit J [Glyphothecium gracile]
Length = 122
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 70 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 122
>gi|164452521|gb|ABY57099.1| NADH dehydrogenase subunit J [Ptychomnion aciculare]
Length = 109
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
+ +S+ L F + C D V + + + +KI
Sbjct: 1 KSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEICIKI 57
Query: 92 AVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 58 FVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 109
>gi|164452496|gb|ABY57087.1| NADH dehydrogenase subunit J [Garovaglia plicata]
Length = 122
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 70 CIKIFVSRQKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 122
>gi|198279069|emb|CAP04568.1| NADH dehydrogenase subunit J [Equisetum palustre]
Length = 124
Score = 64.2 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVAL---YAYGFNYLRCQCAYDVMPGGLLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V + +PS+ I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPKIPSLFWIWKSSDFQEQESYDMFGIIYESHPHLKRILMPDTWIG 124
>gi|166092873|gb|ABY82393.1| NADH dehydrogenase subunit J [Silene schafta]
gi|166239975|gb|ABY86504.1| NADH dehydrogenase subunit J [Silene fruticosa]
Length = 52
Score = 64.2 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
AD+ ERE +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 ADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 49
>gi|164452543|gb|ABY57110.1| NADH dehydrogenase subunit J [Ptychomnion cygnisetum]
gi|164452563|gb|ABY57120.1| NADH dehydrogenase subunit J [Ptychomnion densifolium]
Length = 122
Score = 64.2 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVAL---YAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ K +PSI I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 70 CIKIFVSRKKPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 122
>gi|198279085|emb|CAP04576.1| NADH dehydrogenase subunit J [Equisetum giganteum]
gi|198279095|emb|CAP04581.1| NADH dehydrogenase subunit J [Equisetum variegatum]
Length = 124
Score = 64.2 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYENHPHLKRILMPDTWIG 124
>gi|166092836|gb|ABY82369.1| NADH dehydrogenase subunit J [Silene samia]
Length = 56
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD+ ERE +DM G ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 2 WKSADFQERESYDMLGXSYDNHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 53
>gi|164513056|emb|CAP11621.1| NADH dehydrogenase subunit J [Sorbus aria]
Length = 111
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 7/113 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ L + + C D V + + +K+
Sbjct: 2 KPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKV 58
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G P
Sbjct: 59 FASRRNPRIPSVFWVWKSADFQERESYDMLGILYDNHPRLKRILMPESWIGWP 111
>gi|164452509|gb|ABY57093.1| NADH dehydrogenase subunit J [Hampeella concavifolia]
Length = 119
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVALYV---YGFNYLRSQCAYDVAPGGLLASVYHFTKIQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 67 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 119
>gi|307183029|gb|EFN69985.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial [Camponotus floridanus]
Length = 162
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAV-NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ + G YI N V+ + EL + + ++ C+FL+D + FVN+ D+
Sbjct: 59 TRLVNFGRYISNCLPKYVQQVQLTAGDELEILIAPEGIIPTCAFLKDHHNTQFVNLSDIT 118
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+D SR RF++ + + + I
Sbjct: 119 ALDVPSRQYRFELKMDYAMREVALCVTSSIQ 149
>gi|167889257|gb|ACA09864.1| NADH dehydrogenase subunit J [Stanhopea saccata]
Length = 112
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K + +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFSSRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
AD+ ERE +DM GI++E HP L+RIL + G PL
Sbjct: 75 SADFQERESYDMLGIYYENHPRLKRILMPESWIGWPL 111
>gi|164452460|gb|ABY57070.1| NADH dehydrogenase subunit J [Sciadocladus menziesii]
Length = 125
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVALYV---YGSNYLRSQCAYDVAPGGLLASVYHFTKIENNADQPEEI 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V + +PS+ I+ AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 70 CIKIFVSRQNPKIPSVFWIWKSADFQERESYDMLGIYYENHPRLKRILMPDTWIGW 125
>gi|195953676|ref|YP_002121966.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Hydrogenobaculum
sp. Y04AAS1]
gi|195933288|gb|ACG57988.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Hydrogenobaculum
sp. Y04AAS1]
Length = 478
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFER 114
+ + D L + F + Y F K V P DW+ER
Sbjct: 14 HQFLGVFVSDDLEKEGVFKIRYLFCDIKSK----KLNTVELNAKDTFPHMDIPVLDWYER 69
Query: 115 EVWDMYGIFFEGHPDLRRILT---DYGFEGHPLRKDFPVT----GFVELHYDD 160
E++DM+G+ EGHP+LR ++ +Y + HPLRKD + G+ Y+D
Sbjct: 70 EIYDMFGLIPEGHPNLRPLMLFPENYPKDFHPLRKDANMNIKYEGYKTYPYED 122
>gi|198279071|emb|CAP04569.1| NADH dehydrogenase subunit J [Equisetum hyemale]
gi|198279089|emb|CAP04578.1| NADH dehydrogenase subunit J [Equisetum ramosissimum]
Length = 124
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYENHPYLKRILMPDTWIG 124
>gi|198279063|emb|CAP04565.1| NADH dehydrogenase subunit J [Equisetum sylvaticum]
Length = 124
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 VLQIKAEDLPSIAIALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKSSDFQEQESYDMFGIIYESHPHLKRILMPDTWIG 124
>gi|300921419|ref|ZP_07137779.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
115-1]
gi|300411653|gb|EFJ94963.1| respiratory-chain NADH dehydrogenase, subunit [Escherichia coli MS
115-1]
Length = 489
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
PS+ P A W ERE+ DMYG+ G PD RR++ + HPLRKD
Sbjct: 22 FPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDIHPLRKD 72
>gi|164452436|gb|ABY57059.1| NADH dehydrogenase subunit J [Asplenium trichomanes]
Length = 104
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
F + C D + V + P + + KI V +PS+ ++
Sbjct: 10 YGFNYLRSQCAYDSAPGGSLVSVYHLTQVRDQPDQSEEVCTKIFVPRKDPKIPSVYWVWK 69
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+D ERE +DM GI +EGHP LRRIL + G
Sbjct: 70 SSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 104
>gi|53804773|ref|YP_113608.1| hydrogenase subunit [Methylococcus capsulatus str. Bath]
gi|53758534|gb|AAU92825.1| hydrogenase subunit [Methylococcus capsulatus str. Bath]
Length = 527
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
+ VV L + L + +PS +PGA ER D
Sbjct: 53 CRWAGGWGEARGESWVVNALLEKSGDYLLLRTVLPPGRTGLPSHTPHFPGAARPERHTRD 112
Query: 119 MYGIFFEGHPDLRRILTDYGF--EGHPLRKDFPVTG 152
+ G+ F GHPD RR + + PLR DFP+ G
Sbjct: 113 LLGLKFIGHPDDRRWVRHQAWGEREFPLRPDFPLAG 148
>gi|167889234|gb|ACA09853.1| NADH dehydrogenase subunit J [Erycina crista-galli]
Length = 112
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
AD+ ERE +DM GI +E HP L+RIL + G PL
Sbjct: 75 SADFQERESYDMLGISYENHPRLKRILMPESWIGWPL 111
>gi|255525492|ref|ZP_05392429.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Clostridium
carboxidivorans P7]
gi|296188575|ref|ZP_06856963.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Clostridium
carboxidivorans P7]
gi|255510857|gb|EET87160.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Clostridium
carboxidivorans P7]
gi|296046839|gb|EFG86285.1| respiratory-chain NADH dehydrogenase, 49 Kd subunit [Clostridium
carboxidivorans P7]
Length = 526
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 5/146 (3%)
Query: 13 VNSFSGSVRFAVNSV-GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR 71
S + E+ +DV+ + SL S F+ + + + N
Sbjct: 7 KEELSNLKYNSEIKNKNEIYVDVEISHVKSLISLFLVKYKLKFIAQFCVDNSNEENAQND 66
Query: 72 FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
F + + K R V + + + + I + FERE+ D++G+ + D R
Sbjct: 67 FMINIILSNSKK--RYFVIVRYKTQEEIKTFQDILFQSHLFEREMCDLFGLKIKDGIDTR 124
Query: 132 RILTDYGFEG--HPLRKDFPVTGFVE 155
+I+ + +PLRK FP +E
Sbjct: 125 KIVKHEKWPEDVYPLRKSFPYGAKLE 150
>gi|166092885|gb|ABY82401.1| NADH dehydrogenase subunit J [Eudianthe laeta]
Length = 55
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD+ ERE +DM GI ++ HP L+RIL + G PLRK + V F E+
Sbjct: 1 WKSADFQERESYDMLGISYDNHPRLKRILMPESWVGWPLRKXYIVPNFYEIQ 52
>gi|198279077|emb|CAP04572.1| NADH dehydrogenase subunit J [Equisetum x dycei]
gi|198279079|emb|CAP04573.1| NADH dehydrogenase subunit J [Equisetum arvense]
gi|198279081|emb|CAP04574.1| NADH dehydrogenase subunit J [Equisetum arvense]
Length = 124
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 VLQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKSSDFQEQESYDMFGILYESHPHLKRILMPDTWIG 124
>gi|164512936|emb|CAP11561.1| NADH dehydrogenase subunit J [Cypripedium calceolus]
Length = 111
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 34 VDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ D +++ S++ + D+ L+ + +
Sbjct: 1 IKPEDWHSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHL-TRIEYGVDQPEEVCIKVF 59
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
A +PS+ ++ AD+ ERE +DM GI ++ HP L+RIL + G P
Sbjct: 60 ASRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWP 111
>gi|257053295|ref|YP_003131128.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Halorhabdus
utahensis DSM 12940]
gi|256692058|gb|ACV12395.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Halorhabdus
utahensis DSM 12940]
Length = 157
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 12/149 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSV-GELSLDV-DCGDLVSLCSFLRDDPHCCFVNIIDLCGV 63
L + + S + + G L + D LV L +++ + GV
Sbjct: 4 SQLKRKLDDELSELLAASEEHDCGRLEFVLADRDALVEAIETL---QEMGITHLVTITGV 60
Query: 64 DFLSRSNRFDVVYHFLSPKYNR-----RLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
D + L ++ V + + ++ I PGA +ERE+
Sbjct: 61 DAGDEIEVLYHFLKYGEYDDGDLSEGVELTIRAIVPKDDPTIETLTDILPGATLYERELM 120
Query: 118 DMYGIFFEGHPDLRRILTDYGFE-GHPLR 145
DM G+ GHP+ ++L F+ G PLR
Sbjct: 121 DMLGVEVTGHPNPEKLLLADNFDGGPPLR 149
>gi|198279093|emb|CAP04580.1| NADH dehydrogenase subunit J [Equisetum sylvaticum]
gi|198279097|emb|CAP04582.1| NADH dehydrogenase subunit J [Equisetum x fontqueri]
Length = 124
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKSSDFQEQESYDMFGIIYESHPHLKRILMPDTWIG 124
>gi|164452414|gb|ABY57048.1| NADH dehydrogenase subunit J [Asplenium ceterach]
Length = 105
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAV-AEGKSVPSIVGIYP 107
F + C D + V Y P + + KI V + +PS+ ++
Sbjct: 11 YGFNYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEVCTKIFVSRKDPKIPSVYWVWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+D ERE +DM GI +EGHP LRRIL + G
Sbjct: 71 SSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 105
>gi|164512888|emb|CAP11537.1| NADH dehydrogenase subunit J [Aglaia korthalsii]
gi|164512890|emb|CAP11538.1| NADH deydrogenase subunit J [Aglaia odoratissima]
Length = 118
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 10 TLQIKPEDWHSVAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEI 66
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+K+ +PS+ ++ +++ ERE +DM GI ++ HP L+RIL
Sbjct: 67 CIKVFAPRSNPKIPSVFWVWKSSNFQERESYDMLGILYDNHPRLKRILMPE 117
>gi|313199635|ref|YP_004021251.1| NADH-plastoquinone oxidoreductase subunit J [Isoetes flaccida]
gi|291575364|gb|ADE18077.1| NADH-plastoquinone oxidoreductase subunit J [Isoetes flaccida]
Length = 158
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 33/62 (53%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153
E +PS+ I AD+ ERE +DM GI E HP L RIL G PLRKD V F
Sbjct: 92 REDPRIPSVFWIRKSADFQERESYDMLGIIHESHPRLERILMPDTRIGWPLRKDHIVPDF 151
Query: 154 VE 155
E
Sbjct: 152 YE 153
>gi|164452448|gb|ABY57065.1| NADH dehydrogenase subunit J [Tortella arctica]
Length = 125
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ L + C D V + + +
Sbjct: 13 ILQIKSENWLSIAVALYV---YGSNYLRSQCAYDVAPGGLLASVYHFTKIQNNADQPEEI 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+KI V+ K +PS+ I+ AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 70 CIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGIYYENHPRLKRILMPDTWIGW 125
>gi|164512892|emb|CAP11539.1| NADH deydrogenase subunit J [Alcantarea imperialis]
Length = 107
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ + V I+
Sbjct: 12 YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDQPEEVCIKVFASRNNPRIPSVFWIWR 71
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
AD+ ERE +DM GI + HP L+RIL + G P
Sbjct: 72 SADFQERESYDMLGISYNNHPRLKRILMPESWIGWP 107
>gi|167889215|gb|ACA09845.1| NADH dehydrogenase subunit J [Galeandra dives]
Length = 112
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A +PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVAPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQIPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI +E HP +RIL + G PLR
Sbjct: 75 SADFQERESYDMLGISYENHPRCKRILMPDSWIGWPLR 112
>gi|164512938|emb|CAP11562.1| NADH dehydrogenase subunit J [Cypripedium henryi]
Length = 111
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 3/112 (2%)
Query: 34 VDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ D +++ S++ + D+ FL+ + K
Sbjct: 1 IKNEDWDSIAVISYVYGYNYLRSQCAYDVAPGGFLASVYHL-TKIRYGIDKPEEVCIKVF 59
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
A PS+ I+ AD+ ERE +DM GIF+E HP L+RIL + G P
Sbjct: 60 APRSNPRTPSVFWIWRSADFQERESYDMLGIFYENHPRLKRILMPESWIGWP 111
>gi|238784032|ref|ZP_04628047.1| Formate hydrogenlyase subunit 5 [Yersinia bercovieri ATCC 43970]
gi|238715009|gb|EEQ07006.1| Formate hydrogenlyase subunit 5 [Yersinia bercovieri ATCC 43970]
Length = 536
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 85 RRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--H 142
+ + E PS+ P A W EREV DMYG+ G PD RR++ + +
Sbjct: 55 WVIVKALISPERPEFPSVTPRVPAAVWGEREVRDMYGLQPVGLPDERRLVLPDDWPDDLY 114
Query: 143 PLRKD 147
PLRKD
Sbjct: 115 PLRKD 119
>gi|164452408|gb|ABY57045.1| NADH dehydrogenase subunit J [Asplenium ceterach]
Length = 99
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 51 HCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAV-AEGKSVPSIVGIY 106
F + C D + V Y P + + KI V + +PS+ ++
Sbjct: 4 RLRFHYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEVCTKIFVSRKDPKIPSVYWVW 63
Query: 107 PGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+D ERE +DM GI +EGHP LRRIL + G
Sbjct: 64 KSSDLQERESYDMLGIIYEGHPHLRRILMPDSWIGW 99
>gi|164512894|emb|CAP11540.1| NADH deydrogenase subunit J [Alcantarea regina]
Length = 107
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ + V I+
Sbjct: 12 YGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGIDKPEEVCIKVFASRNNPRIPSVFWIWR 71
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
AD+ ERE +DM GI + HP L+RIL + G P
Sbjct: 72 SADFQERESYDMLGISYNNHPRLKRILMPESWIGWP 107
>gi|218884266|ref|YP_002428648.1| NADH-quinone oxidoreductase, B subunit [Desulfurococcus
kamchatkensis 1221n]
gi|218765882|gb|ACL11281.1| NADH-quinone oxidoreductase, B subunit [Desulfurococcus
kamchatkensis 1221n]
Length = 337
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
V+ + L++ H FVNI VD+ +V Y +P ++ VK
Sbjct: 207 VNPEKIRDALMDLKNKGHVLFVNIN---TVDYPD-KGVIEVYYVLENPSDGSQVWVKTYA 262
Query: 94 AEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKDFPVT 151
+ S+ I+P A + EREV++ G+ F +P+L++ + D +EG PLRKD
Sbjct: 263 KRASPEIDSVHDIFPLAKYIEREVYEFMGVVFRNNPELKKWILDGNWEGPPPLRKDVDTA 322
Query: 152 GFV 154
GFV
Sbjct: 323 GFV 325
>gi|198279091|emb|CAP04579.1| NADH dehydrogenase subunit J [Equisetum scirpoides]
Length = 124
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL + G
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYESHPHLKRILMPDTWIG 124
>gi|317153002|ref|YP_004121050.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
aespoeensis Aspo-2]
gi|316943253|gb|ADU62304.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
aespoeensis Aspo-2]
Length = 175
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFF 124
L + F V+YHF + R+ +++ + V I +Y GA+W ERE D +GI F
Sbjct: 54 LDFNEGFLVLYHFNRWTIDERVTLRVLIPRDNPVVPSIASVYDGAEWHERETRDFHGIIF 113
Query: 125 EGHPDLRRILTD-YGFEGHPLRKD 147
EG+P+L +L + HPL K
Sbjct: 114 EGNPNLVPLLMPVESADLHPLVKS 137
>gi|166092897|gb|ABY82409.1| NADH dehydrogenase subunit J [Agrostemma githago]
Length = 55
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD+ E E +DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 1 WKSADFQEXESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 52
>gi|239616970|ref|YP_002940292.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Kosmotoga olearia
TBF 19.5.1]
gi|239505801|gb|ACR79288.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Kosmotoga olearia
TBF 19.5.1]
Length = 146
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 10/140 (7%)
Query: 9 GDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
+ + ++ + VD ++ ++ L V + + ++ +
Sbjct: 7 KKELFAAIQENIELLSEKRKRIYFKVDAKNITNVAKIL----FTRGVRLSTITAIENIE- 61
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGH 127
F+++YHF K+ V K V I I GA W ERE+ +++G+ F H
Sbjct: 62 --TFELIYHFSDDLTGCYYCPKVFVPVEKPVVPSIAKIIEGASWIEREIHELFGVGFIDH 119
Query: 128 PDLRRILTDYGF--EGHPLR 145
P L+ +LT+ PLR
Sbjct: 120 PGLKPLLTENNEKIPKKPLR 139
>gi|164452498|gb|ABY57088.1| NADH dehydrogenase subunit J [Garovaglia powellii]
Length = 120
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
L + + +S+ F + C D V + + +
Sbjct: 10 ILQIKSENWLSIAVA---SYAYGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEI 66
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+KI V+ + +PSI I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 67 CIKIFVSRQRPKIPSIFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTW 119
>gi|114329840|ref|YP_740744.1| NADH dehydrogenase subunit 9 [Tetrahymena malaccensis]
gi|114150073|gb|ABI51653.1| NADH dehydrogenase subunit 9 [Tetrahymena malaccensis]
Length = 198
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVW 117
D ++ N+ + Y++ + +L I + + + +W ERE
Sbjct: 81 DFSCIENYFFKNKLLIFYNYYNYFLKSKLTFFIILNQLNKNIDSIDRIFSNANWLERETS 140
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV---YRPVEL 172
+MYGI ++ D R++L DY +P+ K+F G + Y+ +VV VEL
Sbjct: 141 EMYGINYKWKIDTRKLLLDYAKIENPMLKEFQSEGTQDAFYNIFENQVVVLKNETVEL 198
>gi|114329841|ref|YP_740745.1| NADH dehydrogenase subunit 9 [Tetrahymena malaccensis]
gi|114150074|gb|ABI51654.1| NADH dehydrogenase subunit 9 [Tetrahymena malaccensis]
Length = 198
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVW 117
D ++ N+ + Y++ + +L I + + + +W ERE
Sbjct: 81 DFSCIENYFFKNKLLIFYNYYNYFLKSKLTFFIILNQLNKNIDSIDRIFSNANWLERETS 140
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV---YRPVEL 172
+MYGI ++ D R++L DY +P+ K+F G + Y+ +VV VEL
Sbjct: 141 EMYGINYKWKIDTRKLLLDYAKIENPMLKEFQSEGTQDAFYNIFENQVVVLKNETVEL 198
>gi|164512900|emb|CAP11543.1| NADH deydrogenase subunit J [Aristolochia californica]
Length = 106
Score = 61.9 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V I+
Sbjct: 11 YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKVFAPRTNPRIPSVFWIWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
AD+ ERE +DM GI +E HP L+RIL + G P
Sbjct: 71 SADFQERESYDMLGIAYENHPRLKRILMPESWLGWP 106
>gi|171189200|gb|ACB42088.1| NADH dehydrogenase subunit J [Cattleya trianae]
Length = 127
Score = 61.9 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLSSVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
AD+ ERE +DM GI +E HP L+RIL + G PL
Sbjct: 91 SADFKERESYDMLGISYENHPRLKRILMPESWIGWPL 127
>gi|213026184|ref|ZP_03340631.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 154
Score = 61.9 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 73 DVVYHFLSPKYNRRLRVKIAVAEGK---SVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
VY+ LS + + + + V PS+ P A W EREV DMYG+ G PD
Sbjct: 6 YAVYYVLSMEQGTKCWITVRVEVDANKLEFPSVTPRVPAAVWGEREVRDMYGLIPVGLPD 65
Query: 130 LRRILTDYGFEG--HPLRKD 147
RR++ + +PLRKD
Sbjct: 66 ERRLVLPDDWPDELYPLRKD 85
>gi|164452480|gb|ABY57080.1| NADH dehydrogenase subunit J [Euptychium robustum]
Length = 102
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKS-VPSIVGIYP 107
F + C D V + + + +KI V+ K +PSI I+
Sbjct: 8 YGFNYLRSQCAYDVAPGGLLASVYHFTKVQNNADQPEEICIKIFVSRQKPKIPSIFWIWK 67
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
AD+ ERE +DM GI++E HP L+RIL + G
Sbjct: 68 SADFQERESYDMLGIYYENHPRLKRILMPDTWIGW 102
>gi|18977815|ref|NP_579172.1| NADH dehydrogenase subunit C [Pyrococcus furiosus DSM 3638]
gi|18893566|gb|AAL81567.1| NADH dehydrogenase subunit [Pyrococcus furiosus DSM 3638]
Length = 174
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E++ I+ + L V + FLR F ++ + VD+
Sbjct: 7 EEIVKQILEKAPYAEGKVRRER-RLEFRVPADKIRD---FLRIMKESNFPLMLQITAVDW 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGI 122
+ ++VYH ++ + VK + +P++ IYP A+ +ER+V D +G+
Sbjct: 63 P-KEGEIELVYHLINVELGTHAMVKTRIPRDLDKARMPTVKDIYPAAETYERDVHDFFGV 121
Query: 123 FFEGHPDLR-RILTDYGFEG-HPLRKDFPVTGFVELHY------DDKVKKVV 166
+FEG+ + + D G +P RKDF + +V+ Y D+ K V
Sbjct: 122 YFEGNEKMEMPWILDDPERGLYPHRKDFDMLAYVKKKYKILDRFDEDKDKYV 173
>gi|166092853|gb|ABY82380.1| NADH dehydrogenase subunit J [Silene conica]
Length = 56
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 106 YPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELH 157
+ AD ERE DM GI ++ HP L+RIL + G PLRKD+ V F E+
Sbjct: 2 WKSADXQERESXDMLGILYDXHPRLKRILMPESWVGWPLRKDYIVPNFYEIQ 53
>gi|307353718|ref|YP_003894769.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methanoplanus
petrolearius DSM 11571]
gi|307156951|gb|ADN36331.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methanoplanus
petrolearius DSM 11571]
Length = 233
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 18/161 (11%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSV----------GELSLDVDCGDLVSLCSFLRDDP 50
M+ E++ + + F + + + + ++ L L
Sbjct: 8 MMTA-EEVAERFASKFGDQIISSEIKQWCEGTKKTPINSIWMKIETEILHDAVGEL---I 63
Query: 51 HCCFVNIIDLCGVDFLSRSNRFDVVYHFL-SPKYNRRLRVKIAVAEGKSVPS-IVGIYPG 108
F ++ + VD + + F S + ++V + V I + PG
Sbjct: 64 SIDFPHLGVISAVDMIEEIDVLYHFTIFFGSKGSEITVSFIVSVPKENPVVPTISDLIPG 123
Query: 109 ADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
A + ERE ++ GI +G PD R + F +P RKD
Sbjct: 124 AVYSEREKQELMGIIVDGIPDQRGLFLPDDFPEGIYPWRKD 164
>gi|213417094|ref|ZP_03350238.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 478
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
PS+ P A W EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 10 FPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 60
>gi|167889385|gb|ACA09927.1| NADH dehydrogenase subunit J [Hydnora johannis]
Length = 110
Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 7/113 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKI 91
D S+ + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVI---XYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
+ V ++ AD+ ERE +DM GI ++ HP L+RIL + G P
Sbjct: 58 FASRRNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWP 110
>gi|330008025|ref|ZP_08306141.1| respiratory-chain NADH dehydrogenase, subunit [Klebsiella sp. MS
92-3]
gi|328535256|gb|EGF61748.1| respiratory-chain NADH dehydrogenase, subunit [Klebsiella sp. MS
92-3]
Length = 471
Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
PS+ P A W EREV DMYG+ G PD RR++ + +PLRKD
Sbjct: 3 SPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKD 53
>gi|14591238|ref|NP_143315.1| NADH dehydrogenase subunit C [Pyrococcus horikoshii OT3]
gi|3257872|dbj|BAA30555.1| 174aa long hypothetical NADH-ubiquinone oxidoreductase subunit
[Pyrococcus horikoshii OT3]
Length = 174
Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E+L I+ + L V L +++ F ++ + VD+
Sbjct: 7 EELVKKILEKAPYAEGKVRRER-RLEFKVPAERLRDFLMLMKES---NFPLMLQISAVDW 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGI 122
++VYH ++P+ VK + + ++ IYP A+ +ER+V D +G+
Sbjct: 63 PKDGE-IELVYHLINPELGTHAMVKTRIPRELDKAKISTVSDIYPAAETYERDVHDFFGV 121
Query: 123 FFEGHPDLR-RILTDYGFEG-HPLRKDFPVTGFVELHY------DDKVKKVV 166
+FEG+ + + D G +P RKDF + +V+ Y D+ + V
Sbjct: 122 YFEGNERMEMPWILDDPERGLYPHRKDFKMLEYVKKKYKILDRFDENKSRYV 173
>gi|206895957|ref|YP_002247263.1| carbon monoxide-induced hydrogenase, CooU subunit
[Coprothermobacter proteolyticus DSM 5265]
gi|206738574|gb|ACI17652.1| carbon monoxide-induced hydrogenase, CooU subunit
[Coprothermobacter proteolyticus DSM 5265]
Length = 131
Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR 86
GE ++ D++ L F+ D + + + + + N
Sbjct: 18 NGEGEREIVDVDVLKLLEFITDFK----DVLRFITITAYPEED---RLFMQYHFSYGNWV 70
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
+K+ V E K+VPSI + P ADW ERE+ D++ I F HP +R++
Sbjct: 71 CSLKLPVPEDKTVPSITPLLPAADWAEREIMDLFDIKFSNHPRPKRLIIPDD 122
>gi|117925497|ref|YP_866114.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Magnetococcus sp.
MC-1]
gi|117609253|gb|ABK44708.1| NADH dehydrogenase subunit C [Magnetococcus sp. MC-1]
Length = 178
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+ V L + LRD F +++ L VD++ N+F + Y + + L ++
Sbjct: 28 FITVPQAQLQDVLIRLRDRE--GFTHLVLLTAVDWIE-DNQFQLTYLLSNREAAVDLGLR 84
Query: 91 IAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDL-RRILTDYGFEGHPLRKDF 148
+ + + + SI I+P A ++RE+ +M+GI F P + + + + P R+DF
Sbjct: 85 VMIPRDEPVMSSIHIIWPTAATYQRELKEMFGIDFLDSPGIDEPFILEGWSDIPPYRRDF 144
Query: 149 PVTGFVELHYDDKVKK 164
+ E Y ++ +
Sbjct: 145 DTKKYAEETYSNRPWR 160
>gi|164452428|gb|ABY57055.1| NADH dehydrogenase subunit J [Asplenium aethiopicum]
Length = 104
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
F + D V + P + + KI V +PS+ ++
Sbjct: 10 YGFNYLRSQGAYDSAPGGPLVSVYHLTQVRDQPDQSEEVCTKIFVPRKNPKIPSVYWVWK 69
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+D ERE +DM GI +EGHP L+RIL + G
Sbjct: 70 SSDLQERESYDMLGIIYEGHPHLKRILMPDSWIGW 104
>gi|15027659|ref|NP_149393.1| NADH dehydrogenase subunit 9 [Tetrahymena thermophila]
gi|15011495|gb|AAK77590.1|AF396436_30 NADH dehydrogenase subunit 9 [Tetrahymena thermophila]
Length = 198
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVW 117
D ++ N+ V Y++ + +L + I + + +W ERE
Sbjct: 81 DKTNIENYFFKNKMLVFYNYYNYFLKSKLTLFIILNNLNKNIDSIDRIFANANWLERETS 140
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV---YRPVEL 172
+MYGI ++ D R++L DY +P+ K+F G + Y+ +VV VEL
Sbjct: 141 EMYGINYKWKIDTRKLLLDYSKIENPMLKEFQSEGTQDAFYNIFENQVVVLKNETVEL 198
>gi|264684057|emb|CAP46280.1| NADH dehydrogenase [Inga sapindoides]
Length = 117
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 11 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 67
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL
Sbjct: 68 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMP 117
>gi|167889185|gb|ACA09839.1| NADH dehydrogenase subunit J [Cattleya patinii]
Length = 112
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 15 YGYNYLRSQCAYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKVFAPRSNPQTPSVFWIWR 74
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
AD+ ERE +DM GI++E HP L+RIL + G LR
Sbjct: 75 SADFKERESYDMLGIYYENHPRLKRILMPESWIGWSLR 112
>gi|212223635|ref|YP_002306871.1| NADH dehydrogenase subunit C [Thermococcus onnurineus NA1]
gi|212008592|gb|ACJ15974.1| NADH dehydrogenase subunit [Thermococcus onnurineus NA1]
Length = 177
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
+ + + LRD+ F ++ + VD+ + +++Y S + V
Sbjct: 33 IEFSIPADRIRDFLMLLRDN---DFELMLQITTVDWPNDGE-LELIYQMWSVTHRTHAMV 88
Query: 90 KIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR--ILTDYGFEGHPL 144
+ + +P++ IYP A+ +ER+ D +G++FEG+ + IL D P
Sbjct: 89 RTRIPRDLDKARMPTVKDIYPVAETYERDAHDFFGVYFEGNEKMEMPWILDDTEQGLFPH 148
Query: 145 RKDFPVTGFVELHY 158
RKDF + +V+ Y
Sbjct: 149 RKDFDMLTYVKKKY 162
>gi|15027658|ref|NP_149392.1| NADH dehydrogenase subunit 9 [Tetrahymena thermophila]
gi|15011494|gb|AAK77589.1|AF396436_29 NADH dehydrogenase subunit 9 [Tetrahymena thermophila]
Length = 198
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVW 117
D ++ N+ V Y++ + +L + I + + +W ERE
Sbjct: 81 DKTNIENYFFKNKMLVFYNYYNYFLKSKLTLFIILNNLNKSIDSIDRIFANANWLERETS 140
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV---YRPVEL 172
+MYGI ++ D R++L DY +P+ K+F G + Y+ +VV VEL
Sbjct: 141 EMYGINYKWKIDTRKLLLDYSKIENPMLKEFQSEGTQDAFYNIFENQVVVLKNETVEL 198
>gi|332157677|ref|YP_004422956.1| NADH dehydrogenase subunit C [Pyrococcus sp. NA2]
gi|331033140|gb|AEC50952.1| NADH dehydrogenase subunit C [Pyrococcus sp. NA2]
Length = 174
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
E+L I+ + L V + ++++ F ++ + VD+
Sbjct: 7 EELVKRILEKAPYAEGKVRRER-RLEFKVPAERIREFLMVMKEN---NFPLMLQITAVDW 62
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGI 122
L ++VYH ++ + VK + +P++ IYP A+ +ER+V D +G+
Sbjct: 63 LKDGE-IELVYHLMNVELGTHAMVKTRIPRDLDKARIPTVRDIYPAAETYERDVHDFFGV 121
Query: 123 FFEGHP--DLRRILTDYGFEGHPLRKDFPVTGFVELHY------DDKVKKVV 166
FEG+ D+ IL D +P RKDF + +V+ Y D+ K V
Sbjct: 122 VFEGNEKIDMPWILDDPERGLYPHRKDFNMLEYVKRKYKILDRFDEDKDKYV 173
>gi|164513012|emb|CAP11599.1| NADH dehydrogenase subunit J [Muraltia thunbergii]
Length = 119
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR---VK 90
+ GD S+ L + + C D V + +L +K
Sbjct: 1 IKPGDWDSVAIIL---YAYGYNYLRVQCAYDVAPGGLFPSVYHLAKKESCIDQLEEGSIK 57
Query: 91 IAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ V +P ++ AD+ ERE +DM GI ++ HP +RIL + G P K
Sbjct: 58 VIVPRKIPRIPPFFWVWKSADFQERESYDMLGIHYDNHPRPKRILMPESWVGWPYVK 114
>gi|288575152|ref|ZP_06393509.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570893|gb|EFC92450.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 182
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 19/158 (12%)
Query: 6 EDLGDYIVNSFSGSVR-----------FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCF 54
++L +++ + F + + L + + L+ L F
Sbjct: 15 QELAEHLQSVFGDDLSYVDLRGFSEGSSGEVTSHHLWMTIGKSRLLDFVDEL---GKFDF 71
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADW 111
N + G D + + + + + L V + V + +V S+ PG ++
Sbjct: 72 PNFHVVSGDDEGDHISLYYHFDLYRAVERGVSLHVTVCVHVPKDDLTVDSLFSRIPGVEY 131
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRKD 147
ERE+ +M+G+ G P+ + + P R+D
Sbjct: 132 SEREIQEMFGVDHIGLPNKALVFLPDDWNREVFPWRRD 169
>gi|114775565|ref|ZP_01451133.1| hydrogenase subunit [Mariprofundus ferrooxydans PV-1]
gi|114553676|gb|EAU56057.1| hydrogenase subunit [Mariprofundus ferrooxydans PV-1]
Length = 532
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 43/143 (30%), Gaps = 8/143 (5%)
Query: 14 NSFSGSVRFAVNSVGE-----LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSR 68
++ L++ D R G
Sbjct: 11 EHLGDCDIHSIWLNDHRPEHMPCLEIRRLDWAHAACEARRLGMRLVALWGAEAGCHDRD- 69
Query: 69 SNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
++ F P++ L AE +PSI G Y A ER + DM+GI P
Sbjct: 70 AHAMYAYMAFAHPEHRHTLLRTPLAAENPELPSISGHYIAACRMERHMQDMFGIHITDIP 129
Query: 129 DLRRILTDYGFE--GHPLRKDFP 149
D R + + +PLR DF
Sbjct: 130 DPRPWIKHEHWPREAYPLRVDFD 152
>gi|114329931|ref|YP_740833.1| NADH dehydrogenase subunit 9 [Tetrahymena pigmentosa]
gi|114150164|gb|ABI51742.1| NADH dehydrogenase subunit 9 [Tetrahymena pigmentosa]
Length = 198
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVW 117
D ++ N+ V Y++ + +L I + + SI I+ A+W ERE
Sbjct: 81 DKNSIENYFFKNKLLVFYNYYNYFLKNKLTFFIILNSLSKNMNSIDRIFSNANWLERETS 140
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV---YRPVEL 172
+MYGI ++ D R++L DY +P+ K+F G + Y +VV VEL
Sbjct: 141 EMYGINYKWKTDTRKLLLDYSKIENPMLKEFQCEGTQDAFYSIFENQVVVLKNETVEL 198
>gi|164513060|emb|CAP11623.1| NADH dehydrogenase subunit J [Vella pseudocytisus subsp.
pseudocytisus]
gi|164513062|emb|CAP11624.1| NADH dehydrogenase subunit J [Vella pseudocytisus subsp. paui]
Length = 104
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D V + + +K+ V ++
Sbjct: 9 YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQAEEVCIKVFTHRSNPRIPSVFWVWK 68
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
D+ ERE +DM GI ++ HP L+RIL + G P
Sbjct: 69 STDFQERESYDMLGITYDSHPRLKRILMPESWIGWP 104
>gi|164512966|emb|CAP11576.1| NADH dehydrogenase subunit J [Helleborus atrorubens]
Length = 109
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 35 DCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D +++ S++ + D+ L+ + + A
Sbjct: 1 KPEDWHSIAVISYVYGYNYLRCQCAYDVAPGGLLASVYHL-TRIQYGVDQPEEVCIKVFA 59
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 60 PRSNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGW 109
>gi|164512968|emb|CAP11577.1| NADH dehydrogenase subunit J [Helleborus croaticus]
Length = 109
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 35 DCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D +++ S++ + D+ L+ + + A
Sbjct: 1 KPEDWHSIAVISYVYGYNYLRCQCAYDVAPGGLLASVYHL-TRIQYGVDQPEEVCIKVFA 59
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+PS+ I+ AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 60 PRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGW 109
>gi|164453460|gb|ABY57489.1| NADH dehydrogenase subunit J [Brachypodium distachyon]
Length = 107
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVKIAVAEGKSVPSIV-GIYP 107
+ + C D + V + + +K+ + V I+
Sbjct: 13 YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRIPSVFWIWR 72
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
AD+ ERE +DM GI ++ HP L+RIL + G
Sbjct: 73 SADFQERESYDMVGISYDNHPRLKRILMPESWVGW 107
>gi|198279075|emb|CAP04571.1| NADH dehydrogenase subunit J [Equisetum ramosissimum subsp. debile]
Length = 119
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYI---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+K+ V+ + I+ +D+ E+E +DM+GI +E HP+L+RIL
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYENHPNLKRILMP 119
>gi|213586010|ref|ZP_03367836.1| bifunctional NADH:ubiquinone oxidoreductase subunit C/D [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 150
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 12 IVNSF-SGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSN 70
+ N F + G + V L+ + FL+ P +V + DL G+D R++
Sbjct: 23 LRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 81
Query: 71 R-------FDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGI 122
R F V YH +S + NR + +K+A++E ++P A+W+ERE W+M+GI
Sbjct: 82 RDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGI 141
Query: 123 FFEGHP 128
EG P
Sbjct: 142 DIEGPP 147
>gi|167889269|gb|ACA09869.1| NADH dehydrogenase subunit J [Acacia exuvialis]
Length = 90
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 81 PKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ +K+ V+ I ++ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 27 IDQPEEVCIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESW 86
Query: 140 EGHP 143
G P
Sbjct: 87 IGWP 90
>gi|315230619|ref|YP_004071055.1| NADH-ubiquinone oxidoreductase subunit C [Thermococcus barophilus
MP]
gi|315183647|gb|ADT83832.1| NADH-ubiquinone oxidoreductase chain C [Thermococcus barophilus MP]
Length = 173
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K +++ + I+ + + V + + +++ F ++ +
Sbjct: 1 MTMKEQEIVEMILKKAPYAEGKVRRER-RIEFKVPADRIRDFLTLMKES---GFELMLQI 56
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS---VPSIVGIYPGADWFEREVW 117
VD++ + +++Y S + VK + +P++ IYP A+ +ER+
Sbjct: 57 TPVDWI-KEGEIELIYQIWSVTHKIHAMVKTRIPRELEKARMPTVKDIYPAAETYERDAH 115
Query: 118 DMYGIFFEGHPDLR-RILTDYGFEG-HPLRKDFPVTGFVELHY 158
+ +G++FEG+ + + D G +PLRKDF + +V+ Y
Sbjct: 116 EFFGVYFEGNEKMEMPWILDDTERGTYPLRKDFDMLSYVKKKY 158
>gi|159041010|ref|YP_001540262.1| NADH-quinone oxidoreductase, B subunit [Caldivirga maquilingensis
IC-167]
gi|157919845|gb|ABW01272.1| NADH-quinone oxidoreductase, B subunit [Caldivirga maquilingensis
IC-167]
Length = 374
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 7 DLGDYI----VNSFSGSVRFAVNS-VGELSLDVDCGDLVS--LCSFLRDDPHCCFVNIID 59
+LG + S V+ V +L + + + + + S + F ++
Sbjct: 212 ELGQKLIDGFKESLKDGVKNTAVRGVNDLCVMLSNQNHLKDAVLSAFK----LGFDHVKS 267
Query: 60 LCGVDFLSRS--NRFDVVYHFLSPKYNRRLRVKIA--VAEGKSVPSIVGIYPGADWFERE 115
+ +D ++ V+ + S + L + VPSI+ IYPGAD+ ERE
Sbjct: 268 INVIDLINAGVFRMEYVLGSYSSKELQPVLLAIYFDVPRDEAKVPSIIDIYPGADYQERE 327
Query: 116 VWDMYGIFFEGHPDL--RRILTDYGFEGHPLRKDF 148
+ D++G++F+G+P + +L +PLRK++
Sbjct: 328 LHDLFGVWFDGNPWMGNNFLLDPDTPVKYPLRKEY 362
>gi|312880264|ref|ZP_07740064.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aminomonas
paucivorans DSM 12260]
gi|310783555|gb|EFQ23953.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aminomonas
paucivorans DSM 12260]
Length = 182
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L ++VD D L FL F + + G D F++ + R+
Sbjct: 49 DLWVEVDRRDFPDLIQFLFT---LDFPHFHVISGDDEGDGVRLIYHFSLFIACSRSARVG 105
Query: 89 VKIAV---AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HP 143
+ ++V S+PS+ PGA++ ERE+ +M G+ F G P+ I ++ P
Sbjct: 106 LSVSVLLPKGDLSMPSLQDRIPGAEYSEREMREMLGVEFAGMPNRGNIFLPEDWDDDVKP 165
Query: 144 LRKDFPVTGFVELH 157
R+D G ++
Sbjct: 166 WRRDETAPGPDQVR 179
>gi|164512902|emb|CAP11544.1| NADH deydrogenase subunit J [Aristolochia pistolochia]
Length = 106
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ ++ C D V + + +K+ +PS+ I+
Sbjct: 11 YGYNYLLSQCAYDVSPGGLLASVYHFTRIQYGVDQPEEVCIKVFAPRTNSRIPSVFWIWK 70
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
AD+ ERE +DM GI +E HP L R+L + G P
Sbjct: 71 SADFPERESYDMLGISYENHPRLPRLLLPESWLGWP 106
>gi|164512908|emb|CAP11547.1| NADH dehydrogenase subunit J [Begonia conchifolia]
Length = 107
Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 34 VDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ D +++ ++ + F D+ L + +
Sbjct: 2 IKPEDWHSIAVILYVYGYNYLRFQCAYDVAPGGLLPSVYHL-TRIEYGIDQPEEVCVKVF 60
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
A +PS+ I+ AD+ ERE +DM GI ++ HP L+RIL
Sbjct: 61 ATRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPE 106
>gi|183981673|ref|YP_001849964.1| formate hydrogenase HycE [Mycobacterium marinum M]
gi|183174999|gb|ACC40109.1| formate hydrogenase HycE [Mycobacterium marinum M]
Length = 498
Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFE 125
+ VVY ++ + +RR+ + + + + A FERE+ D+YGI
Sbjct: 36 DDGDALRVVYLLVAGQPDRRVELTLRTGAANPSVPSLAELSIPAGRFEREMMDLYGISPV 95
Query: 126 GHPDLRRILTDYGFE--GHPLRKD 147
GHP RR++ + HP+R+D
Sbjct: 96 GHPQPRRLVRHAHWPQDWHPMRRD 119
>gi|164513002|emb|CAP11594.1| NADH dehydrogenase subunit J [Miscanthus sacchariflorus]
Length = 108
Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVK 90
+ GD S+ L + + C D + V + + +K
Sbjct: 2 IKAGDWDSIAVILYV---YGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEVCIK 58
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + V ++ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 59 VFAQKDNPRIPSVFWVWRSADFQERESYDMVGISYDNHPRLKRILMPESW 108
>gi|198279059|emb|CAP04563.1| NADH dehydrogenase subunit J [Equisetum palustre]
gi|198279065|emb|CAP04566.1| NADH dehydrogenase subunit J [Equisetum palustre]
Length = 114
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 8 ILQIKAEDLPSIAVAL---YAYGFNYLRCQCAYDVMPGGLLASVYYLVQVQDNSDQPEEV 64
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+K+ V + +PS+ I+ +D+ E+E +DM+GI +E HP L+RIL
Sbjct: 65 CLKVFVSRKNPKIPSLFWIWKSSDFQEQESYDMFGIIYESHPHLKRILMP 114
>gi|260184944|ref|ZP_05762418.1| formate hydrogenase hycE [Mycobacterium tuberculosis CPHL_A]
gi|289445617|ref|ZP_06435361.1| formate hydrogenase hycE [Mycobacterium tuberculosis CPHL_A]
gi|289418575|gb|EFD15776.1| formate hydrogenase hycE [Mycobacterium tuberculosis CPHL_A]
Length = 492
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
+ VVY FL+ +RR+ ++ V + S+ + A FERE+ D+YGI
Sbjct: 37 DDGDSLRVVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPV 96
Query: 126 GHPDLRRILTDYGFE-GHPLRKD 147
GHP RR++ + HP+R D
Sbjct: 97 GHPKPRRLVRHAHWPDWHPMRTD 119
>gi|218755814|ref|ZP_03534610.1| formate hydrogenase hycE [Mycobacterium tuberculosis GM 1503]
gi|289764203|ref|ZP_06523581.1| formate hydrogenase hycE [Mycobacterium tuberculosis GM 1503]
gi|289711709|gb|EFD75725.1| formate hydrogenase hycE [Mycobacterium tuberculosis GM 1503]
Length = 567
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
+ VVY FL+ +RR+ ++ V + S+ + A FERE+ D+YGI
Sbjct: 36 DDGDSLRVVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPV 95
Query: 126 GHPDLRRILTDYGFE-GHPLRKD 147
GHP RR++ + HP+R D
Sbjct: 96 GHPKPRRLVRHAHWPDWHPMRTD 118
>gi|289552338|ref|ZP_06441548.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN 605]
gi|298527479|ref|ZP_07014888.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308375061|ref|ZP_07667939.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu007]
gi|308376302|ref|ZP_07668249.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu008]
gi|289436970|gb|EFD19463.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN 605]
gi|298497273|gb|EFI32567.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308347623|gb|EFP36474.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu007]
gi|308351564|gb|EFP40415.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu008]
gi|328456794|gb|AEB02217.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN 4207]
Length = 491
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
+ VVY FL+ +RR+ ++ V + S+ + A FERE+ D+YGI
Sbjct: 36 DDGDSLRVVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPV 95
Query: 126 GHPDLRRILTDYGFE-GHPLRKD 147
GHP RR++ + HP+R D
Sbjct: 96 GHPKPRRLVRHAHWPDWHPMRTD 118
>gi|31791265|ref|NP_853758.1| formate hydrogenase HycQ [Mycobacterium bovis AF2122/97]
gi|121636000|ref|YP_976223.1| putative formate hydrogenase hycQ (FHL) [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224988473|ref|YP_002643160.1| putative formate hydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|31616850|emb|CAD92952.1| POSSIBLE FORMATE HYDROGENASE HYCQ (FHL) [Mycobacterium bovis
AF2122/97]
gi|121491647|emb|CAL70105.1| Possible formate hydrogenase hycQ (FHL) [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224771586|dbj|BAH24392.1| putative formate hydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
Length = 492
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
+ VVY FL+ +RR+ ++ V + S+ + A FERE+ D+YGI
Sbjct: 37 DDGDSLRVVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPV 96
Query: 126 GHPDLRRILTDYGFE-GHPLRKD 147
GHP RR++ + HP+R D
Sbjct: 97 GHPKPRRLVRHAHWPDWHPMRTD 119
>gi|15607229|ref|NP_214601.1| formate hydrogenase HycE [Mycobacterium tuberculosis H37Rv]
gi|148659849|ref|YP_001281372.1| putative formate hydrogenase HycE [Mycobacterium tuberculosis
H37Ra]
gi|148821279|ref|YP_001286033.1| formate hydrogenase hycE [Mycobacterium tuberculosis F11]
gi|167970618|ref|ZP_02552895.1| formate hydrogenase hycE [Mycobacterium tuberculosis H37Ra]
gi|215406077|ref|ZP_03418258.1| formate hydrogenase hycE [Mycobacterium tuberculosis 02_1987]
gi|215413943|ref|ZP_03422605.1| formate hydrogenase hycE [Mycobacterium tuberculosis 94_M4241A]
gi|215425286|ref|ZP_03423205.1| formate hydrogenase hycE [Mycobacterium tuberculosis T92]
gi|215433003|ref|ZP_03430922.1| formate hydrogenase hycE [Mycobacterium tuberculosis EAS054]
gi|215448365|ref|ZP_03435117.1| formate hydrogenase hycE [Mycobacterium tuberculosis T85]
gi|219555872|ref|ZP_03534948.1| formate hydrogenase hycE [Mycobacterium tuberculosis T17]
gi|253797005|ref|YP_003030006.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN 1435]
gi|254366543|ref|ZP_04982587.1| formate hydrogenase hycE [Mycobacterium tuberculosis str. Haarlem]
gi|254549019|ref|ZP_05139466.1| formate hydrogenase hycE [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260199083|ref|ZP_05766574.1| formate hydrogenase hycE [Mycobacterium tuberculosis T46]
gi|260203231|ref|ZP_05770722.1| formate hydrogenase hycE [Mycobacterium tuberculosis K85]
gi|289441456|ref|ZP_06431200.1| formate hydrogenase hycE [Mycobacterium tuberculosis T46]
gi|289567977|ref|ZP_06448204.1| formate hydrogenase hycE [Mycobacterium tuberculosis T17]
gi|289572667|ref|ZP_06452894.1| formate hydrogenase hycE [Mycobacterium tuberculosis K85]
gi|289747854|ref|ZP_06507232.1| formate hydrogenase hycE [Mycobacterium tuberculosis 02_1987]
gi|289748555|ref|ZP_06507933.1| formate hydrogenase hycE [Mycobacterium tuberculosis T92]
gi|289756149|ref|ZP_06515527.1| formate hydrogenase hycE [Mycobacterium tuberculosis EAS054]
gi|289760186|ref|ZP_06519564.1| formate hydrogenase hycE [Mycobacterium tuberculosis T85]
gi|294995705|ref|ZP_06801396.1| formate hydrogenase hycE [Mycobacterium tuberculosis 210]
gi|297632560|ref|ZP_06950340.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN 4207]
gi|297729533|ref|ZP_06958651.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN R506]
gi|306778382|ref|ZP_07416719.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu001]
gi|306778914|ref|ZP_07417251.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu002]
gi|306782702|ref|ZP_07421024.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu003]
gi|306787069|ref|ZP_07425391.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu004]
gi|306791626|ref|ZP_07429928.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu005]
gi|306795689|ref|ZP_07433991.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu006]
gi|306970271|ref|ZP_07482932.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu009]
gi|306974504|ref|ZP_07487165.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu010]
gi|307082212|ref|ZP_07491382.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu011]
gi|307082554|ref|ZP_07491667.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu012]
gi|313656861|ref|ZP_07813741.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN V2475]
gi|1405757|emb|CAA98923.1| POSSIBLE FORMATE HYDROGENASE HYCE (FHL) [Mycobacterium tuberculosis
H37Rv]
gi|134152055|gb|EBA44100.1| formate hydrogenase hycE [Mycobacterium tuberculosis str. Haarlem]
gi|148504001|gb|ABQ71810.1| putative formate hydrogenase HycE [Mycobacterium tuberculosis
H37Ra]
gi|148719806|gb|ABR04431.1| formate hydrogenase hycE [Mycobacterium tuberculosis F11]
gi|253318508|gb|ACT23111.1| formate hydrogenase hycE [Mycobacterium tuberculosis KZN 1435]
gi|289414375|gb|EFD11615.1| formate hydrogenase hycE [Mycobacterium tuberculosis T46]
gi|289537098|gb|EFD41676.1| formate hydrogenase hycE [Mycobacterium tuberculosis K85]
gi|289541730|gb|EFD45379.1| formate hydrogenase hycE [Mycobacterium tuberculosis T17]
gi|289688382|gb|EFD55870.1| formate hydrogenase hycE [Mycobacterium tuberculosis 02_1987]
gi|289689142|gb|EFD56571.1| formate hydrogenase hycE [Mycobacterium tuberculosis T92]
gi|289696736|gb|EFD64165.1| formate hydrogenase hycE [Mycobacterium tuberculosis EAS054]
gi|289715750|gb|EFD79762.1| formate hydrogenase hycE [Mycobacterium tuberculosis T85]
gi|308213340|gb|EFO72739.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu001]
gi|308328092|gb|EFP16943.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu002]
gi|308332466|gb|EFP21317.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu003]
gi|308336230|gb|EFP25081.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu004]
gi|308339844|gb|EFP28695.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu005]
gi|308343838|gb|EFP32689.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu006]
gi|308352249|gb|EFP41100.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu009]
gi|308356206|gb|EFP45057.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu010]
gi|308360159|gb|EFP49010.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu011]
gi|308367709|gb|EFP56560.1| formate hydrogenase hycE [Mycobacterium tuberculosis SUMu012]
gi|326905847|gb|EGE52780.1| formate hydrogenase hycE [Mycobacterium tuberculosis W-148]
Length = 492
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
+ VVY FL+ +RR+ ++ V + S+ + A FERE+ D+YGI
Sbjct: 37 DDGDSLRVVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPV 96
Query: 126 GHPDLRRILTDYGFE-GHPLRKD 147
GHP RR++ + HP+R D
Sbjct: 97 GHPKPRRLVRHAHWPDWHPMRTD 119
>gi|14520921|ref|NP_126396.1| NADH dehydrogenase subunit C [Pyrococcus abyssi GE5]
gi|5458138|emb|CAB49627.1| nuoC NADH dehydrogenase I, subunit C, putative [Pyrococcus abyssi
GE5]
Length = 174
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
L V L S +++ F ++ + VD+L + ++VYH ++ + V
Sbjct: 30 LEFKVPVERLREFLSVMKEH---NFPLMLQISAVDWL-KEGEIELVYHLMNIELGTHAMV 85
Query: 90 KIAVAEG---KSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR-RILTDYGFEG-HPL 144
K+ + VP++ IYP A+ +ER+V D +G++FEG+ + + D G +P
Sbjct: 86 KVRIPRDLEKAKVPTVRDIYPAAETYERDVHDFFGVYFEGNDKMEMPWILDDPERGLYPH 145
Query: 145 RKDFPVTGFVELHY------DDKVKKVV 166
RKDF + +V+ Y D+ + V
Sbjct: 146 RKDFNMLEYVKRKYKILDRFDENKDRYV 173
>gi|198279057|emb|CAP04562.1| NADH dehydrogenase subunit J [Equisetum variegatum]
Length = 114
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 8 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 64
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL
Sbjct: 65 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYENHPHLKRILMP 114
>gi|198279073|emb|CAP04570.1| NADH dehydrogenase subunit J [Equisetum hyemale]
Length = 119
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 13 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 69
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL
Sbjct: 70 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYENHPYLKRILMP 119
>gi|11466281|ref|NP_049596.1| NADH dehydrogenase subunit 9 [Tetrahymena pyriformis]
gi|5306157|gb|AAD41941.1|AF160864_29 NADH dehydrogenase subunit 9 [Tetrahymena pyriformis]
Length = 198
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVWDMY 120
++ N+ V Y++ + ++ + I + + +W ERE +MY
Sbjct: 84 SIENFFFKNKLLVFYNYYNYFLRSKITLFIILNNLSKSMDSIDRVFSNANWLERETSEMY 143
Query: 121 GIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV---YRPVEL 172
G+ ++ D R++L DY +P+ K+F G + Y+ +VV VEL
Sbjct: 144 GVHYKWKIDTRKLLLDYSKIENPMLKEFQSEGTQDAFYNIFENQVVVLKNETVEL 198
>gi|242399264|ref|YP_002994688.1| Membrane-bound hydrogenase MBH 2, subunit Mbh2K (hydrogenase
subunit) [Thermococcus sibiricus MM 739]
gi|242265657|gb|ACS90339.1| Membrane-bound hydrogenase MBH 2, subunit Mbh2K (hydrogenase
subunit) [Thermococcus sibiricus MM 739]
Length = 186
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 18/162 (11%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNS-----------VGELSLDVDCGDLVSLCSFLRDD 49
M E++ D + ++ E+ +++D +
Sbjct: 1 MTLTAENVFDKLKEELGDAILNYEFKEYKMGVKKPRTYKEIWMEIDKNAFRRAIEAIFKI 60
Query: 50 PHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR--LRVKIAVAEGKSVPSIVGIYP 107
+ ++ + G D F + + +P+I +
Sbjct: 61 E---YPHLHFITGEDIGESIRMIYSFGLFHEHPWGEVSIVIKFDLPKNKLVLPTITDLMM 117
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRKD 147
GA+ ERE+ +M G+ F+G + R + + +P R+D
Sbjct: 118 GAETNEREIREMLGVEFDGLKNKRHLFLPDDWPEGKYPWRRD 159
>gi|294102252|ref|YP_003554110.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aminobacterium
colombiense DSM 12261]
gi|293617232|gb|ADE57386.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aminobacterium
colombiense DSM 12261]
Length = 181
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 12/155 (7%)
Query: 5 IEDLGDYIVNSFSGSV----------RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCF 54
+E++ + +SF +V ++ L + L FL F
Sbjct: 14 LENVLSSLRDSFGENVVKDVREYRAGNDQAVIYNQIWLTTSREKFLELVEFLFGFDFLHF 73
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFER 114
+ D +S + F + K +PS+ PG ++ ER
Sbjct: 74 HVLSGNDDGDVVSLNYHFSLFRVAGRDKRLGVTVSVAIPKSDLVMPSLFKTIPGVEYSER 133
Query: 115 EVWDMYGIFFEGHPD--LRRILTDYGFEGHPLRKD 147
E+ +M GI FEG + L + D+ P R+D
Sbjct: 134 EMREMLGIDFEGLQNKALVFLPEDWDESIKPWRRD 168
>gi|164512910|emb|CAP11548.1| NADH dehydrogenase subunit J [Begonia plagioneura]
Length = 107
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 7/108 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVK 90
+ D S+ L + + C D V + + VK
Sbjct: 2 IKPEDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCVK 58
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
+ V I+ AD+ ERE +DM GI ++ HP L+RIL
Sbjct: 59 VFATRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPE 106
>gi|258653159|ref|YP_003202315.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Nakamurella
multipartita DSM 44233]
gi|258556384|gb|ACV79326.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Nakamurella
multipartita DSM 44233]
Length = 506
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
R VVY F ++R+ + + +PS+ G+ A FERE+ D++GI +
Sbjct: 42 ERGGTLRVVYVFTRAGTDQRVELTLRCDPADPHLPSLAGLSFPAGRFEREIRDLFGIVPD 101
Query: 126 GHPDLRRILTDYGFE--GHPLRKD 147
GHP R++ + + HP+R+D
Sbjct: 102 GHPMPSRLVRHFHWPRGWHPMRRD 125
>gi|151367624|gb|ABS10580.1| NADH dehydrogenase subunit J [Impatiens capensis]
Length = 107
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVYHFLS---PKYNRRLRVKIAVAE-GKSVPSIVGIYP 107
+ + C D V + + +K+ +PS+ ++
Sbjct: 10 YGYNYLRSXCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKVFAPRSNPKIPSVFWVWK 69
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
D+ ERE +DM GI+++ P L+RIL + G PLR
Sbjct: 70 TVDFQERESYDMLGIYYDXXPRLKRILMPESWIGWPLR 107
>gi|164512954|emb|CAP11570.1| NADH dehydrogenase subunit J [Equisetum telmateia]
Length = 106
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKI 91
DL S+ L F + C D + V Y + + +K+
Sbjct: 1 KAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEVCLKV 57
Query: 92 AVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
V+ + I+ +D+ E+E +DM+GI +E HP L+RIL +
Sbjct: 58 FVSRKNPRIPSLFWIWKSSDFQEQESYDMFGIIYESHPHLKRILMPESW 106
>gi|198279067|emb|CAP04567.1| NADH dehydrogenase subunit J [Equisetum telmateia]
Length = 114
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 8 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 64
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL
Sbjct: 65 CLKVFVSRKNPRIPSLFWIWKSSDFQEQESYDMFGIIYESHPHLKRILMP 114
>gi|313794096|gb|EFS42118.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL110PA1]
Length = 194
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 33 DVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
DV + + P ++ + G + VV + +
Sbjct: 5 DVPAIGWHDAVAQAVSTHPWLA--HLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTR 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+G ++ SIVG+ GA W++RE+ D +G+ F G R L + PLRK+
Sbjct: 63 VPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRPLLPHDPPKPPLRKE 118
>gi|313836233|gb|EFS73947.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL037PA2]
gi|314927670|gb|EFS91501.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL044PA1]
gi|314971331|gb|EFT15429.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL037PA3]
gi|328906271|gb|EGG26046.1| LOW QUALITY PROTEIN: NADH dehydrogenase subunit [Propionibacterium
sp. P08]
Length = 197
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 3/120 (2%)
Query: 29 ELSLDVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRL 87
+ DV + + P + ID GV + VV + +
Sbjct: 1 MTTRDVPATAWHDAVAQAVSTHPWLAHMTAID--GVGERGQDPDIIVVCRMENHDGDDVT 58
Query: 88 RVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
++ S+V + GA W++RE+ D +G+ F G R L + PLRK+
Sbjct: 59 VSTRVPRNDGTLDSVVDVLAGASWYQREIHDFFGVRFVGPGADDRALLIHDALKPPLRKE 118
>gi|164513004|emb|CAP11595.1| NADH dehydrogenase subunit J [Miscanthus sinensis]
Length = 108
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVK 90
+ D S+ + + C D V + + +K
Sbjct: 2 IKTEDWYSIAVI---SYVYGYNYLRSQCAYDVAPGGFLASVYHLTRIQYGVDKPEEVCIK 58
Query: 91 IAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ V + S+ I+ AD+ ERE +DM GI ++ HP L+RIL +
Sbjct: 59 VFVPRNNPRISSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESW 108
>gi|289522404|ref|ZP_06439258.1| putative NADH dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504240|gb|EFD25404.1| putative NADH dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 181
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 13/155 (8%)
Query: 6 EDLGDYIVNSFSGSVRFAVN-----------SVGELSLDVDCGDLVSLCSFLRDDPHCCF 54
E++ ++ + ++ S ++ + D G + L L F
Sbjct: 14 EEIKSFLEERLTNNLESLEIRERVAGAKEKTSFYDMWITCDKGAFIDLVDSLFMLDFPIF 73
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFER 114
I DF+ + F + K + ++PS+ PG ++ ER
Sbjct: 74 HVISGDDAGDFVLLNYHFSLFTSAGRGKRVGVVVSVKVQKNDLTMPSLYDKIPGIEYSER 133
Query: 115 EVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
E+ +M G+ FEG PD + ++ HP R+D
Sbjct: 134 EMHEMLGVSFEGLPDQSLVFLPENWDEKVHPWRRD 168
>gi|304569716|ref|YP_011503.2| hydrogenase subunit CooU [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234414|gb|ADP87268.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
vulgaris RCH1]
Length = 181
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 31/103 (30%), Gaps = 3/103 (2%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA 94
+ L L + + V + + + V
Sbjct: 44 ERDTLPEAARLL-AEGGARLATVTAYDPVREPGVPRQEIAYHFDVHGTTLTVTVVLDPEC 102
Query: 95 EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
SI + ADW ERE +MY I GHP+ RR+ D
Sbjct: 103 PSVP--SITPHFRNADWNEREFMEMYDIAVPGHPNPRRLFLDE 143
>gi|149193852|ref|ZP_01870950.1| carbon monoxide-induced hydrogenase, CooU subunit [Caminibacter
mediatlanticus TB-2]
gi|149135805|gb|EDM24283.1| carbon monoxide-induced hydrogenase, CooU subunit [Caminibacter
mediatlanticus TB-2]
Length = 156
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 13/128 (10%)
Query: 12 IVNSFSGSVRFAVNSVGELSLD--VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS 69
I +F +R + G + +D ++ + +++ II +
Sbjct: 3 IKEAFDFELREVKDKKGNIEYWAKIDKYKILDVAKTVKNLNGR--CVIITAYKEEIPRLV 60
Query: 70 NRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPD 129
FDV ++ + + E K V SI I A W ERE +MYGI HP+
Sbjct: 61 YHFDVDGVLINIEVDI---------EDKRVDSITPILKSASWAEREFKEMYGIEPINHPN 111
Query: 130 LRRILTDY 137
+R+ D
Sbjct: 112 PKRLFLDD 119
>gi|46450114|gb|AAS96763.1| hydrogenase, CooU subunit, putative [Desulfovibrio vulgaris str.
Hildenborough]
Length = 178
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 31/103 (30%), Gaps = 3/103 (2%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA 94
+ L L + + V + + + V
Sbjct: 41 ERDTLPEAARLL-AEGGARLATVTAYDPVREPGVPRQEIAYHFDVHGTTLTVTVVLDPEC 99
Query: 95 EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
SI + ADW ERE +MY I GHP+ RR+ D
Sbjct: 100 PSVP--SITPHFRNADWNEREFMEMYDIAVPGHPNPRRLFLDE 140
>gi|320101011|ref|YP_004176603.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurococcus
mucosus DSM 2162]
gi|319753363|gb|ADV65121.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfurococcus
mucosus DSM 2162]
Length = 151
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Query: 20 VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
V V G L V ++ + + + + + + + D Y L
Sbjct: 17 VEKGVVKPGRTLLVVKPENVKQVFAEMLEKIGRENMYLSTIVATDMKDEGRIRLDYYVVL 76
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR-ILTDYG 138
P+ + + V SI+ + PGA E E D+ G+ F+G+P LRR
Sbjct: 77 LPEEETIVIRTHLPRDNPVVDSIIDVIPGALAGECEAHDLLGVVFQGNPFLRRGFFVPRD 136
Query: 139 ---FEGHPLRKD 147
+PLRKD
Sbjct: 137 LVEQGKYPLRKD 148
>gi|198279055|emb|CAP04561.1| NADH dehydrogenase subunit J [Equisetum scirpoides]
Length = 114
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
L + DL S+ L F + C D + V Y + +
Sbjct: 8 ILQIKAEDLPSIAVALYV---YGFNYLRCQCAYDVMPGGFLASVYYLVQVQDNSDQPEEV 64
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD 136
+K+ V+ + I+ +D+ E+E +DM+GI +E HP L+RIL
Sbjct: 65 CLKVFVSRKNPRIPSLFWIWKTSDFQEQESYDMFGIIYESHPHLKRILMP 114
>gi|303325628|ref|ZP_07356071.1| carbon monoxide-induced hydrogenase, CooU subunit [Desulfovibrio
sp. 3_1_syn3]
gi|302863544|gb|EFL86475.1| carbon monoxide-induced hydrogenase, CooU subunit [Desulfovibrio
sp. 3_1_syn3]
Length = 178
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ + S V + K E +VPSI ++ ADW ERE+ ++
Sbjct: 64 VTAYNRRQLSEPMQEVCYHFELKGVIYNLTVTLNGEWPTVPSITPLFANADWHEREMMEL 123
Query: 120 YGIFFEGHPDLRRILTDYG 138
YGI HPD RR+ D
Sbjct: 124 YGIQVTDHPDPRRLFLDEE 142
>gi|224372781|ref|YP_002607153.1| hydrogenase-3, subunit E [Nautilia profundicola AmH]
gi|223588597|gb|ACM92333.1| hydrogenase-3, subunit E [Nautilia profundicola AmH]
Length = 454
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH--PL 144
+ + + +V S++ YP A W ER++ D +GI FEG D R ++ F H PL
Sbjct: 25 IERQSVDKKNPTVKSLMSKYPSAIWMERKIKDEFGIEFEGAFDTRPLVKHERFPKHIYPL 84
Query: 145 RKDF 148
RKDF
Sbjct: 85 RKDF 88
>gi|167045511|gb|ABZ10164.1| putative Respiratory-chain NADH dehydrogenase, 30 Kd subunit
[uncultured marine microorganism HF4000_APKG10H11]
Length = 107
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 51 HCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGA 109
+ + L DFL + + ++ + S + ++ +++ + K + SI I
Sbjct: 3 ELKYKTVTSLIVTDFLE--DNYFLLLYVFSTEEGKQKFIEVKIPRDKPKIQSIYKICDSV 60
Query: 110 DWFEREVWDMYGIFFEGHP-DLRRILTDYGFE-GHPLRKDF 148
W E+E+ +++G+ F GHP D + +L + G+P RKD+
Sbjct: 61 FWHEQEMSELFGVKFIGHPRDGKHLLLRDDWPSGYPHRKDY 101
>gi|164452579|gb|ABY57128.1| NADH dehydrogenase subunit J [Tetraphidopsis pusilla]
Length = 80
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 87 LRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+ +KI V+ K +PS+ I+ AD+ ERE +DM GI +E HP L+RIL + G
Sbjct: 24 ICIKIFVSRQKPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPDTWIGW 80
>gi|298530618|ref|ZP_07018020.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509992|gb|EFI33896.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfonatronospira
thiodismutans ASO3-1]
Length = 195
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
V DL++ L F + D+ VD F +VYHF R+ +++
Sbjct: 43 FFVTPQDLLNAVGKL---DQAGF-FLEDVSCVDMQE---GFQMVYHFDRFDQPGRVGIRV 95
Query: 92 AVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG-HPLRKD 147
+++ VPSI IYPGA W ERE +D +G+ F+GHP+L +L +G PL K+
Sbjct: 96 MISKENPEVPSIYDIYPGAAWHERECFDFFGVRFKGHPNLLPLLLAPDHDGPPPLLKE 153
>gi|124485779|ref|YP_001030395.1| hypothetical protein Mlab_0958 [Methanocorpusculum labreanum Z]
gi|124363320|gb|ABN07128.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Methanocorpusculum
labreanum Z]
Length = 193
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 21/159 (13%)
Query: 7 DLGDYIVNSFSGSVRFAVN----------SVGELSLDVDCGDLVSLCSFLRDDPHCCFVN 56
++ + + + ++ + + + + + L + +
Sbjct: 9 EVVEKLKAALGDAMLESSIRVRAEGVKKRENSNIWITIQKEAIHFAVEELM---KIRYPH 65
Query: 57 IIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-----VPSIVGIYPGADW 111
+ + G D ++ V Y F + + +P+I + GA +
Sbjct: 66 LSCISGYDKGAKDPNLRVQYIFSLYGGIENTECMVIFSTDIPKADPHIPTITDLMEGAAF 125
Query: 112 FEREVWDMYGIFFEGHPDLR-RILTDYGFEG--HPLRKD 147
E+E + GI +G P+ + + F +PLRKD
Sbjct: 126 TEQEKREYLGIIVDGLPEAKHKFFLPQDFPSNIYPLRKD 164
>gi|154150666|ref|YP_001404284.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Candidatus
Methanoregula boonei 6A8]
gi|153999218|gb|ABS55641.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Methanoregula
boonei 6A8]
Length = 526
Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
E LDV+ +L R P N + + ++ + S + +
Sbjct: 32 ECILDVNADELD------RAVPGLAARNFVLSALFATPVYAGEGYILRYVFSHAGS--IL 83
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY--GFEGHPLRK 146
V K SI I+P A W ERE DMYGI FEG D RR++ +PL K
Sbjct: 84 VLSRALNRKQATSIATIFPSATWPERECRDMYGIKFEGAFDTRRLVLHETCPAGFYPLEK 143
Query: 147 D 147
Sbjct: 144 S 144
>gi|307353198|ref|YP_003894249.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methanoplanus
petrolearius DSM 11571]
gi|307156431|gb|ADN35811.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methanoplanus
petrolearius DSM 11571]
Length = 517
Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 21/138 (15%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP 81
GE + V LC F R+D + F + Y F S
Sbjct: 24 EIDTDFGERIEYLKRSGYVLLCLFCREDSATR----------------DLFRLTYIFESQ 67
Query: 82 KYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD--YGF 139
+ R ++ + SI +P A +ERE+ D +GI F G D RR++ Y
Sbjct: 68 ENRRIYEMEYETSGD--AISIAEKFPTASLYEREITDGFGILFRGSFDTRRLILHAAYPK 125
Query: 140 EGHPLRKDFPVTGFVELH 157
+ HPL+K F G V +
Sbjct: 126 DFHPLKKSF-CNGPVNVR 142
>gi|296241800|ref|YP_003649287.1| NADH dehydrogenase subunit C [Thermosphaera aggregans DSM 11486]
gi|296094384|gb|ADG90335.1| NADH dehydrogenase subunit C [Thermosphaera aggregans DSM 11486]
Length = 545
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 14/157 (8%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP 81
+ + + + L L ++ C + D + F + + F
Sbjct: 21 SIMVDGDTIHIVAKPEYIPGLAGKLFNEFKCVHRTCV---ATDERPLNGFFSLTHLFTDD 77
Query: 82 KYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD-YGF 139
+ +K + K I+ P ADW E E D+ GI FEG R +L +
Sbjct: 78 SNGFYVALKTYLEGDKPRAPSIIEQVPAADWCEMEARDLVGIEFEGRSAYRLVLPPGWPS 137
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKV-VYRPVELMQE 175
+ +PLRKDF YD + + V + + +E
Sbjct: 138 DVYPLRKDF--------QYDKRPSILPVSEKITITEE 166
>gi|315231236|ref|YP_004071672.1| membrane bound hydrogenase beta (NADH dehydrogenase) [Thermococcus
barophilus MP]
gi|315184264|gb|ADT84449.1| membrane bound hydrogenase beta (NADH dehydrogenase) [Thermococcus
barophilus MP]
Length = 184
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 19/160 (11%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSL-----------DVDCGDLVSLCSFLRDDPHC 52
+E++ + + S ++ E+ + ++D +
Sbjct: 2 NVEEVIEKLEKSLGDALLNYEIREYEMGIRRKRKLYEVWAEIDRSAFRKAVETI---FSL 58
Query: 53 CFVNIIDLCGVDFLSR--SNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGA 109
+ ++ + G D + + +P + +K + + +P+I + PGA
Sbjct: 59 DYPHLHLISGEDNGGDSIKMIYSFGVFYSNPWGEVSITLKFDLPKDSLILPTITDLMPGA 118
Query: 110 DWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRKD 147
+ ERE+ +M GI FEG + R + + +P R+D
Sbjct: 119 ETNEREIREMLGIEFEGLKNKRHLFLPDDWPEGKYPWRRD 158
>gi|90425974|ref|YP_534344.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rhodopseudomonas
palustris BisB18]
gi|90107988|gb|ABD90025.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rhodopseudomonas
palustris BisB18]
Length = 171
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDV---DCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
+ I FS + N G ++ + D DLV+ C L+ + + +
Sbjct: 14 IARMIRGEFS----ISENRHGRVTAWITLADKDDLVATCRALKAFEA----RLSMITALA 65
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
+ F+++ + + + + VK+ +A G SV +IV I+ ADW ERE + Y I
Sbjct: 66 DRNAG--FNLLAYHFDIEGST-VTVKVKLASGASVDTIVPIFRNADWHEREFMEFYDIKT 122
Query: 125 EGHPDLRRILTDYGFEGHPLRKDFPVT 151
G D RR+ D +G + + P++
Sbjct: 123 NGRTDNRRLFLDESVDGRVMERLIPLS 149
>gi|120602013|ref|YP_966413.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Desulfovibrio
vulgaris DP4]
gi|120562242|gb|ABM27986.1| NADH dehydrogenase subunit C [Desulfovibrio vulgaris DP4]
Length = 181
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA 94
+ L L + + V + + + +
Sbjct: 44 ERDTLPEAARLL-AEGGARLATVTAYDPVREPGVPRQEIAYHFDVHGTTLT--VTVVLDT 100
Query: 95 EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
E SVPSI + ADW ERE +MY I GHP+ RR+ D
Sbjct: 101 ESPSVPSITPYFRNADWNEREFMEMYDIAVPGHPNPRRLFLDE 143
>gi|317126121|ref|YP_004100233.1| NADH dehydrogenase subunit C [Intrasporangium calvum DSM 43043]
gi|315590209|gb|ADU49506.1| NADH dehydrogenase subunit C [Intrasporangium calvum DSM 43043]
Length = 516
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI-VGIYPGADWFEREVWDMYGIFFE 125
+RF VVY FL+ +RR+ + + G+ A FERE+ D+YGI
Sbjct: 57 EDEDRFRVVYLFLAGHPDRRVELVLTTDRDAPSVPTLAGLSFPAGRFEREMRDLYGIIPL 116
Query: 126 GHPDLRRILTDYGFE--GHPLRKD 147
HP RR++ + +P+R+D
Sbjct: 117 DHPLPRRLVRHQHWPQGWYPMRRD 140
>gi|164512952|emb|CAP11569.1| NADH dehydrogenase subunit J [Equisetum palustre]
Length = 106
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 7/109 (6%)
Query: 35 DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVKI 91
D S+ + + C D V + + +K+
Sbjct: 1 KPEDWHSIAVI---SYVYGYNYLRSQCAYDVAPGGLLASVYHLTKIEYGVDQPEEVCIKV 57
Query: 92 AVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
V I+ AD+ ERE +DM GI +E HP L+RIL +
Sbjct: 58 FAPRRNPRIPSVFWIWKSADFQERESYDMLGITYENHPRLKRILMPESW 106
>gi|114329886|ref|YP_740789.1| NADH dehydrogenase subunit 9 [Tetrahymena paravorax]
gi|114150119|gb|ABI51698.1| NADH dehydrogenase subunit 9 [Tetrahymena paravorax]
Length = 198
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGA-DWFEREVW 117
D ++ +N+ V Y++ + + + + + + +W ERE
Sbjct: 81 DQNFLENFFFNNKILVFYNYYNYFLKSKYTFFLIINKLSKNLDSIDRIYSNANWLERETS 140
Query: 118 DMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVV---YRPVEL 172
+MYGI ++ D R++L DY P+ K++ G ++ Y+ +V VEL
Sbjct: 141 EMYGINYKWKLDTRKLLLDYSKIESPMLKEYQTEGTQDVFYNIFENQVTATKNETVEL 198
>gi|254166686|ref|ZP_04873540.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
gi|254167536|ref|ZP_04874388.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
gi|289596351|ref|YP_003483047.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aciduliprofundum
boonei T469]
gi|197623799|gb|EDY36362.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
gi|197624296|gb|EDY36857.1| Respiratory-chain NADH dehydrogenase, 30 Kd subunit domain protein
[Aciduliprofundum boonei T469]
gi|289534138|gb|ADD08485.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Aciduliprofundum
boonei T469]
Length = 176
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 6/131 (4%)
Query: 24 VNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGV-DFLSRSNRFDVVYHFLSPK 82
+ +++ D L + +I + + + + F + Y + +
Sbjct: 29 KIKRTNIFVNIKREDFRKFMDLLFEIQDYPHFAVISVTDLGEDMELLYHFTIDYGKQNDE 88
Query: 83 YNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE-- 140
LRVK+ + +I + PGA ERE+ +M G+ F G D R +
Sbjct: 89 KTISLRVKLP-KNDLRIETITDLIPGAMISEREIHEMVGVDFIGLEDTRHFFLPENWPEG 147
Query: 141 GHPLRKD--FP 149
+P R+D FP
Sbjct: 148 KYPWRRDETFP 158
>gi|169835443|gb|ACA96873.1| NADH dehydrogenase subunit J [Blumea balsamifera]
Length = 125
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 7/114 (6%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNR 85
+ L GD S+ L + + C D + + +
Sbjct: 15 IELSNKPGDWHSIAVILYV---YGYNYLRSQCAYDVAPGGLLASAYHLTRIEYGVDQPEE 71
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
A +PS+ ++ D+ ERE +DM GI ++ HP L+RIL +
Sbjct: 72 XCIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESW 125
>gi|315106025|gb|EFT78001.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL030PA1]
Length = 194
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 33 DVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
DV + + P ++ + G + VV + +
Sbjct: 5 DVPAIGWHDAVAQAVSTHPWLA--HLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTR 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+G ++ SIVG+ GA W++RE+ D +G+ F G R L + PLRK+
Sbjct: 63 VPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKE 118
>gi|313812141|gb|EFS49855.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL025PA1]
Length = 194
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 33 DVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
DV + + P ++ + G + VV + +
Sbjct: 5 DVPAIGWHDAVAQAVSTHPWLA--HLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTR 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+G ++ SIVG+ GA W++RE+ D +G+ F G R L + PLRK+
Sbjct: 63 VPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKE 118
>gi|313773017|gb|EFS38983.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL074PA1]
gi|313812032|gb|EFS49746.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL083PA1]
gi|313831119|gb|EFS68833.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL007PA1]
gi|313833478|gb|EFS71192.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL056PA1]
gi|314974301|gb|EFT18397.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL053PA1]
gi|314976927|gb|EFT21022.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL045PA1]
gi|314985815|gb|EFT29907.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL005PA1]
gi|315096824|gb|EFT68800.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL038PA1]
gi|327325635|gb|EGE67433.1| NADH dehydrogenase subunit [Propionibacterium acnes HL096PA2]
gi|327445305|gb|EGE91959.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL043PA1]
gi|327446945|gb|EGE93599.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL043PA2]
gi|328762246|gb|EGF75738.1| NADH dehydrogenase subunit [Propionibacterium acnes HL099PA1]
Length = 194
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 33 DVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
DV + + P ++ + G + VV + +
Sbjct: 5 DVPAIGWHDAVAQAVSTHPWLA--HLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTR 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+G ++ SIVG+ GA W++RE+ D +G+ F G R L + PLRK+
Sbjct: 63 VPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKE 118
>gi|50843354|ref|YP_056581.1| NADH dehydrogenase subunit [Propionibacterium acnes KPA171202]
gi|289424799|ref|ZP_06426581.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes SK187]
gi|289427660|ref|ZP_06429372.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes J165]
gi|295131425|ref|YP_003582088.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes SK137]
gi|50840956|gb|AAT83623.1| NADH dehydrogenase subunit [Propionibacterium acnes KPA171202]
gi|289154762|gb|EFD03445.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes SK187]
gi|289159151|gb|EFD07343.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes J165]
gi|291377178|gb|ADE01033.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes SK137]
gi|313763089|gb|EFS34453.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL013PA1]
gi|313802412|gb|EFS43637.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL110PA2]
gi|313807855|gb|EFS46339.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL087PA2]
gi|313816887|gb|EFS54601.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL059PA1]
gi|313819193|gb|EFS56907.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL046PA2]
gi|313819768|gb|EFS57482.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL036PA1]
gi|313823885|gb|EFS61599.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL036PA2]
gi|313827246|gb|EFS64960.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL063PA1]
gi|313828424|gb|EFS66138.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL063PA2]
gi|313838112|gb|EFS75826.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL086PA1]
gi|314914552|gb|EFS78383.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL005PA4]
gi|314919204|gb|EFS83035.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL050PA1]
gi|314920638|gb|EFS84469.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL050PA3]
gi|314925723|gb|EFS89554.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL036PA3]
gi|314931452|gb|EFS95283.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL067PA1]
gi|314957012|gb|EFT01118.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL027PA1]
gi|314957826|gb|EFT01929.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL002PA1]
gi|314960667|gb|EFT04768.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL002PA2]
gi|314963377|gb|EFT07477.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL082PA1]
gi|314969728|gb|EFT13826.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL037PA1]
gi|314979887|gb|EFT23981.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL072PA2]
gi|314988402|gb|EFT32493.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL005PA2]
gi|314988826|gb|EFT32917.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL005PA3]
gi|315077113|gb|EFT49188.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL053PA2]
gi|315079803|gb|EFT51779.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL078PA1]
gi|315084888|gb|EFT56864.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL027PA2]
gi|315087243|gb|EFT59219.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL002PA3]
gi|315088976|gb|EFT60952.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL072PA1]
gi|315100091|gb|EFT72067.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL059PA2]
gi|315100585|gb|EFT72561.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL046PA1]
gi|315109356|gb|EFT81332.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL030PA2]
gi|327328229|gb|EGE69996.1| NADH dehydrogenase subunit [Propionibacterium acnes HL096PA3]
gi|327449058|gb|EGE95712.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL013PA2]
gi|327451404|gb|EGE98058.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL092PA1]
gi|327452596|gb|EGE99250.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL087PA3]
gi|327457639|gb|EGF04294.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL083PA2]
gi|328751921|gb|EGF65537.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL087PA1]
gi|328756934|gb|EGF70550.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL020PA1]
gi|328759053|gb|EGF72669.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL025PA2]
gi|332676293|gb|AEE73109.1| NADH dehydrogenase subunit [Propionibacterium acnes 266]
Length = 194
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 33 DVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
DV + + P ++ + G + VV + +
Sbjct: 5 DVPAIGWHDAVAQAVSTHPWLA--HLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTR 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+G ++ SIVG+ GA W++RE+ D +G+ F G R L + PLRK+
Sbjct: 63 VPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKE 118
>gi|221136506|ref|XP_002171173.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 73
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 7 DLGDYIVNSFSGSVRFAVN-SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ G ++ +S V+ A EL + + ++ + +FLRD + F ++D+ VD+
Sbjct: 2 EFGQFVSDSMPKFVQSAEVTEGDELQVLISPDGIIPILTFLRDHTNAQFKQLMDITAVDW 61
Query: 66 LSRSNRFDVVY 76
S+ RF+V+
Sbjct: 62 PSKPYRFEVII 72
>gi|282855244|ref|ZP_06264576.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes J139]
gi|282581832|gb|EFB87217.1| respiratory-chain NADH dehydrogenase, 30 Kd subunit
[Propionibacterium acnes J139]
gi|314924058|gb|EFS87889.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL001PA1]
gi|314965029|gb|EFT09128.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL082PA2]
gi|314983105|gb|EFT27197.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL110PA3]
gi|315090648|gb|EFT62624.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL110PA4]
gi|315093838|gb|EFT65814.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL060PA1]
gi|315104056|gb|EFT76032.1| respiratory-chain NADH dehydrogenase, subunit [Propionibacterium
acnes HL050PA2]
gi|327326471|gb|EGE68260.1| NADH dehydrogenase subunit [Propionibacterium acnes HL103PA1]
Length = 194
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
++ + G + VV + + +G ++ SIV + GA W++RE
Sbjct: 27 HLTAIDGAGERGQDPDIIVVCRLENHDGDDVTISTRVPRDGGTLDSIVDVLAGASWYQRE 86
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+ D +G+ F G R L + PLRK+
Sbjct: 87 IHDFFGVRFVGPGADDRALLVHDAPKPPLRKE 118
>gi|118463072|ref|YP_884227.1| hydrogenase-4, G subunit, putative [Mycobacterium avium 104]
gi|118164359|gb|ABK65256.1| hydrogenase-4, G subunit, putative [Mycobacterium avium 104]
Length = 492
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIY-PGADWFEREVWDMYGIFFE 125
++R VVY FL+ + +RR+ ++ + + A FERE+ D+YGI
Sbjct: 36 DDADRLRVVYLFLAGRPDRRVELECVLPVDDPSLPSLAYLSFPAGRFEREMLDLYGISPI 95
Query: 126 GHPDLRRILTDYGFE--GHPLRKD------FPVTGF 153
GHP RR++ + +P+R D F TG
Sbjct: 96 GHPRPRRLVRHAHWPEAWYPMRADAGPAPEFTATGH 131
>gi|296242363|ref|YP_003649850.1| NADH dehydrogenase 30 kDa subunit [Thermosphaera aggregans DSM
11486]
gi|296094947|gb|ADG90898.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermosphaera
aggregans DSM 11486]
Length = 147
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +++ L + ++ G + V DL S+ S + + + L
Sbjct: 1 MSSRLDFLSSF-------TIETQTIKPGRKAYVVKPEDLRSVFSKMIEVLGDSSFYVSTL 53
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
G D Y + P+ + + ++ SI+ + PG E E D+
Sbjct: 54 IGTDLKDEGKIRLDYYVVILPEEETIVFRTFIPRDNPTIDSIIDLIPGILPGECETHDLL 113
Query: 121 GIFFEGHPDLRR-ILTDYG---FEGHPLRKD 147
G+ F+G+P L+R +PLRKD
Sbjct: 114 GVVFKGNPFLKRGFFVPSDIVEQGKYPLRKD 144
>gi|327333153|gb|EGE74880.1| NADH dehydrogenase subunit [Propionibacterium acnes HL097PA1]
Length = 194
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 33 DVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
DV + + P ++ + G + VV + +
Sbjct: 5 DVPAIGWHDAVAQAVSTHPWLA--HLTAIDGAGERGQDPDIIVVCRLENHDGDDVTISTR 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
+G ++ SIVG+ GA W++RE+ D +G+ F G R L + PLRK+
Sbjct: 63 VPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKE 118
>gi|297837949|ref|XP_002886856.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332697|gb|EFH63115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 145
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 14/128 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+L + D S+ L + + C D + + + + +
Sbjct: 28 TLQIKPEDWHSIAVILYV---YGYNYLRSQCAYDV---APGGLLASVYHLTRIEYGVNQA 81
Query: 91 IAVAEGKSVPSIVGIYPGADW-FEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
V P W ++R I ++ HP L+RIL + G PLRKD+
Sbjct: 82 EEVCIKVFTHRSNPRIPSVFWVWKR-------ITYDSHPRLKRILMPESWIGWPLRKDYI 134
Query: 150 VTGFVELH 157
F E+
Sbjct: 135 APNFYEIQ 142
>gi|218888273|ref|YP_002437594.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218759227|gb|ACL10126.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 215
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 44/156 (28%), Gaps = 19/156 (12%)
Query: 1 MVRKIEDLGDY--IVNSFSGS----VRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCF 54
M+ + L + + + + ++ G + + + L C
Sbjct: 1 MLTRPAQLQAKALLDQRLPDAAGADISWTEDAHGNIYGWIMLDNAPRLAELAPAMSRCRL 60
Query: 55 VNII--DLCGVDFLSRSNRFDVVYH-----------FLSPKYNRRLRVKIAVAEGKSVPS 101
+ R + L+ VPS
Sbjct: 61 RLCTMTAYDPERDPANPQRAIAYHFDLDGLTLTVTAPLAMPPVDDADENGEAPGRPEVPS 120
Query: 102 IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
I + ADW ERE +MY I GHP+ RR+ D
Sbjct: 121 ITPWFRNADWNEREFMEMYDIAVTGHPNPRRLFLDE 156
>gi|118581925|ref|YP_903175.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Pelobacter
propionicus DSM 2379]
gi|118504635|gb|ABL01118.1| Membrane bound hydrogenase subunit mbhK [Pelobacter propionicus DSM
2379]
Length = 154
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 54/149 (36%), Gaps = 8/149 (5%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGE-LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
+ + + + + F G + +D L SL F F++++ L
Sbjct: 1 MTRETTIAEELARRFPGLKESIRVQRERRIFVDTPAETLNSLIDF--AYSELGFISLVSL 58
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
G D V+ R + + ++ G +P A+++E+E+ D+
Sbjct: 59 VGTDEGETLGVMYVLAADDGILLTVR---RYQPKTDPVIATMTGKFPNAEYYEKELVDLL 115
Query: 121 GIFFEGHPDLRRILTDYGFEG--HPLRKD 147
G EG P R + +PLRK+
Sbjct: 116 GFRIEGLPPGPRYPLPDDWPEGQYPLRKE 144
>gi|269128896|ref|YP_003302266.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermomonospora
curvata DSM 43183]
gi|268313854|gb|ACZ00229.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermomonospora
curvata DSM 43183]
Length = 486
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 87 LRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHP 143
+ + + V I + A FERE+ D+YGI E HP RR++ + + +P
Sbjct: 50 VELHLPVPGDDPRLPSIASLSFPAGRFEREMRDLYGIVPENHPLPRRLVRHHHWPRGWYP 109
Query: 144 LRKD 147
+R D
Sbjct: 110 MRDD 113
>gi|224373085|ref|YP_002607457.1| carbon monoxide-induced hydrogenase, CooU subunit [Nautilia
profundicola AmH]
gi|223589242|gb|ACM92978.1| carbon monoxide-induced hydrogenase, CooU subunit [Nautilia
profundicola AmH]
Length = 171
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 16/143 (11%)
Query: 1 MVRKIE-DLGDYIVNSFSGS--VRFAVNSVGELSLDV---DCGDLVSLCSFLRDDPHCCF 54
M ++ + + +G +R + G + + + + D++ + +++
Sbjct: 1 MKETLKQKVITELKERLTGDYELRDEKDEKGNIQIWLKLHNRKDILHVAEVVKELGG--- 57
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFER 114
+ + + D + L V SI I A+W ER
Sbjct: 58 -RCVIISAY------KKDDHHVLVYHLDIDGMLLNVEVELFDNKVDSITLILNSANWTER 110
Query: 115 EVWDMYGIFFEGHPDLRRILTDY 137
E +M+GI GHP+ R+ D
Sbjct: 111 EFKEMFGIELIGHPNPARLFLDE 133
>gi|212704285|ref|ZP_03312413.1| hypothetical protein DESPIG_02340 [Desulfovibrio piger ATCC 29098]
gi|212672247|gb|EEB32730.1| hypothetical protein DESPIG_02340 [Desulfovibrio piger ATCC 29098]
Length = 179
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ + + + + + AE +VPSI ++ ADW ERE+ ++
Sbjct: 64 ITAYNLKQLGEQQQELCYHFELQGVVYNITVTLTAEHNTVPSITPLFANADWHEREMMEL 123
Query: 120 YGIFFEGHPDLRRILTDYG 138
YGI P+ RR+ D
Sbjct: 124 YGIRVANQPNPRRLFLDEE 142
>gi|67968298|dbj|BAE00198.1| NADH dehydrogenase subunit J [Selaginella uncinata]
Length = 172
Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 87 LRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
L +K +V++ V + AD ERE DM G F E HP L+RI G P R
Sbjct: 98 LCIKASVSKKHPRIPSVLRVRKSADLQERESHDMSGTFHESHPRLKRIPMPDTRIGRPPR 157
Query: 146 KDFPVTGFVELH 157
KD V F EL
Sbjct: 158 KDHTVPDFHELQ 169
>gi|296166646|ref|ZP_06849072.1| hydrogenase-4, G subunit [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897981|gb|EFG77561.1| hydrogenase-4, G subunit [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 491
Score = 54.2 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFE 125
VVY FL+ + +RR+ ++ V + + V S+ + A FERE+ D+YGI
Sbjct: 36 DDGADLRVVYLFLAGRPDRRVELECVVPKHEPAVRSLAYLSFPAGRFEREMADLYGIRSV 95
Query: 126 GHPDLRRILTDYGFE--GHPLRKD 147
GHP RR++ + HP+R D
Sbjct: 96 GHPKARRLVRHAHWPEDWHPMRHD 119
>gi|323717287|gb|EGB26493.1| hypothetical protein TMMG_00511 [Mycobacterium tuberculosis
CDC1551A]
Length = 430
Score = 54.2 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 95 EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE-GHPLRKD 147
+ + S+ + A FERE+ D+YGI GHP RR++ + HP+R D
Sbjct: 4 DNPEIRSLAYLSFPAGRFEREMADLYGIRPVGHPKPRRLVRHAHWPDWHPMRTD 57
>gi|167945569|ref|ZP_02532643.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 108
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFV 154
S+ IY A +FER++ +MYG++FEG P++ R + P+RK+F +V
Sbjct: 12 YLSVYDIYQPAAFFERDIHEMYGLWFEGSPNMERFILTEWEGPPPMRKEFDSEAYV 67
>gi|27808001|dbj|BAC55446.1| NADH dehydrogenase 30 kDa subunit [Anthoceros formosae]
Length = 137
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGEL--------SLDVDCGDLVSLCSFLRDDPHC 52
M+ + + I S + + L +L V D +S+ L
Sbjct: 1 MLETFTNDTNEIQGRLSAWLIKHRLAHRPLGFDYQGVETLQVRSEDWLSIAVAL---YAY 57
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRLRVKIAV-AEGKSVPSIVGIYPG 108
F + C D V + + + +KI V + +PS+ ++ G
Sbjct: 58 GFNYLRSQCVYDVAPGGLLASVYHLTKVQSNADQPEEVCIKIFVSRKNPKIPSVFWVWKG 117
Query: 109 ADWFEREVWDMYGIFFEGHP 128
AD+ ERE +DM GI +E HP
Sbjct: 118 ADFQERESYDMLGISYESHP 137
>gi|55591516|gb|AAV54057.1| cytochrome oxidase subunit I [Daucus carota]
Length = 754
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 155 ELHYDDKVKKVVYRPVELMQEHRDYDFLSP 184
E+ YDD K+VV P+ + QE R +D P
Sbjct: 563 EVRYDDPEKRVVSEPIGMTQEFRYFDSAKP 592
>gi|289641810|ref|ZP_06473967.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Frankia symbiont of
Datisca glomerata]
gi|289508335|gb|EFD29277.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Frankia symbiont of
Datisca glomerata]
Length = 514
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWD 118
G D VVY F+ + R+ + + + + + A FERE+ D
Sbjct: 52 HDGADAPG-GPAIRVVYLFVKGPPDSRVELHVRLDPDTPALPSLAHLSFPAGRFEREMRD 110
Query: 119 MYGIFFEGHPDLRRILTDYGFE--GHPLRKD 147
++GI HP RR++ + +P+R D
Sbjct: 111 LHGIVPLNHPLPRRLVRHPHWPRGWYPMRPD 141
>gi|220905146|ref|YP_002480458.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869445|gb|ACL49780.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 178
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
+ + S V + E +VPSI ++ ADW ERE+ ++
Sbjct: 64 VTAYNRRQLSEPMQEVCYHFELDGVVYNMTVTLNGEWPTVPSITPLFANADWHEREMMEL 123
Query: 120 YGIFFEGHPDLRRILTDYG 138
YGI G P+ RR+ D
Sbjct: 124 YGIQVTGQPNPRRLFLDEE 142
>gi|291615015|ref|YP_003525172.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sideroxydans
lithotrophicus ES-1]
gi|291585127|gb|ADE12785.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sideroxydans
lithotrophicus ES-1]
Length = 516
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
++ DL +C + D ++ L G D + F + L+ L V+++
Sbjct: 23 EIGPDDLHEICRQVHD----GGGRLVALWGSDTRQQDRGFQLHVLLLNETGMVCLNVQLS 78
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFF-EGHPDLRRILTDYGFE--GHPLRKDFP 149
+ P I I+P A +R +DM GI+ EGH D R+ + + PLRKDF
Sbjct: 79 AEQ-PVYPDISQIFPAASRMQRATYDMLGIYAQEGH-DHRKWVRHGAWHSGSFPLRKDFD 136
>gi|121534186|ref|ZP_01666011.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermosinus
carboxydivorans Nor1]
gi|121307289|gb|EAX48206.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Thermosinus
carboxydivorans Nor1]
Length = 180
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 11/144 (7%)
Query: 1 MVRKI-EDLGDYIVNSFSG--SVRFAVNSVGELSLDV---DCGDLVSLCSFLRDDPHCCF 54
M R I E+ + + + S+R+ +S G ++ D + ++ +
Sbjct: 1 MKRNIQEEFTEKLTEAMGDGFSLRWETDSKGVITGWCRLRDHHHITNVAWIVASLGG--- 57
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFE 113
+I + R + V I + V SI I ADW E
Sbjct: 58 -RVITITAYKTKDVQQREVHEIAYHFDLDGCTCTVTIEIPRDSGKVNSITPILKSADWTE 116
Query: 114 REVWDMYGIFFEGHPDLRRILTDY 137
RE+ ++YGI GHP+ +R+ D
Sbjct: 117 RELQELYGIKVVGHPNPKRLFLDE 140
>gi|240169559|ref|ZP_04748218.1| formate hydrogenase HycE [Mycobacterium kansasii ATCC 12478]
Length = 490
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIY-PGADWFEREVWDMYGIFFE 125
+VY L+ + +RR+ + + +G A FERE+ D+YG+ +
Sbjct: 32 DDGETLRIVYLLLAGQPDRRVELTLTTDAATPSVPSLGHLSIPAGRFEREMMDLYGVVPQ 91
Query: 126 GHPDLRRILTDYGFE--GHPLRKD------FPVTG 152
GHP RR++ + +P+R++ FP G
Sbjct: 92 GHPQPRRLVRHGHWPQEWYPMRRNAGQPPPFPNAG 126
>gi|282165310|ref|YP_003357695.1| putative [NiFe]-hydrogenase large subunit [Methanocella paludicola
SANAE]
gi|282157624|dbj|BAI62712.1| putative [NiFe]-hydrogenase large subunit [Methanocella paludicola
SANAE]
Length = 530
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 31 SLDVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
+++ + + L+ + + +D+ + + P + LR
Sbjct: 3 IVEIRPDAISDNVTELLKRGARLIYASGVDM---GVRGIKVNYYFCFDMKEPSEHTILRT 59
Query: 90 KIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ E V SI I ADW ERE+ + G+ +GHP+ + ++
Sbjct: 60 YLD-RENPVVQSITPITDQADWSERELIEFLGVKVQGHPNPTHLWLPLNWD 109
>gi|298289307|gb|ADI75234.1| NADH dehydrogenase subunit 9 [Leishmania amazonensis]
Length = 191
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
ID CG F+ + + L + + L FERE
Sbjct: 66 FCIDFCGFCFVRFVLLYVLFCLILCFRVSFVLICFFLFFGLVFSLFFCS--YALCIFERE 123
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+D++G F G+ L R D+ F G L K +P+ G
Sbjct: 124 CFDLFGFVFCGNDCLHRFYVDWFFVGFFLCKLYPLFG 160
>gi|298289306|gb|ADI75233.1| NADH dehydrogenase subunit 9 [Leishmania amazonensis]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
ID CG F+ + + L + + L FERE
Sbjct: 66 FCIDFCGFCFVRFVLLYVLFCLILCFRVSFVLICFFLFFGLVFSLFFCS--YALCIFERE 123
Query: 116 VWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
+D++G F G+ L R D+ F G L K +P+ G
Sbjct: 124 CFDLFGFVFCGNDCLHRFYVDWFFVGFFLCKLYPLFG 160
>gi|78044023|ref|YP_360648.1| carbon monoxide-induced hydrogenase subunit CooU [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996138|gb|ABB15037.1| carbon monoxide-induced hydrogenase, CooU subunit [Carboxydothermus
hydrogenoformans Z-2901]
Length = 180
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 98 SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
V SI I ADW ERE+ ++YGI GHP+ +R+ D
Sbjct: 101 KVNSITPILKSADWTERELQELYGIKVVGHPNPKRLFLDD 140
>gi|264684073|emb|CAP46288.1| NADH dehydrogenase [Asterella leptophylla]
Length = 104
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 62
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHP 128
+K+ V+ I ++ AD+ ERE +DM GI ++ HP
Sbjct: 63 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHP 104
>gi|319957575|ref|YP_004168838.1| NADH dehydrogenase (ubiquinone) 30 kda subunit [Nitratifractor
salsuginis DSM 16511]
gi|319419979|gb|ADV47089.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Nitratifractor
salsuginis DSM 16511]
Length = 467
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 101 SIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVTGFVE 155
SI+ +P A WFER+ D +GI FEG D R ++ + +P+R+DF V +E
Sbjct: 40 SIMPRFPAAIWFERKTADDFGIRFEGAFDFRPLVHHERWPEGVYPMRRDFDVHTVLE 96
>gi|264684017|emb|CAP46260.1| NADH dehydrogenase [Araucaria columnaris]
gi|264684029|emb|CAP46266.1| NADH dehydrogenase [Araucaria rulei]
gi|264684087|emb|CAP46295.1| NADH dehydrogenase [Plagiochasma rupestre]
gi|264684089|emb|CAP46296.1| NADH dehydrogenase [Plagiochasma rupestre]
Length = 105
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 62
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGHP 128
+K+ V+ I ++ AD+ ERE +DM GI ++ HP
Sbjct: 63 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHP 104
>gi|261856377|ref|YP_003263660.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Halothiobacillus
neapolitanus c2]
gi|261836846|gb|ACX96613.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Halothiobacillus
neapolitanus c2]
Length = 518
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Query: 31 SLDVDCGDLVSLCSFLRDDP-HCCFVNIIDLCGVDFLSRSNRFDVVYHFLS-PKYNRRLR 88
+ + L+ L DD + C +F V Y +
Sbjct: 18 TQTLRPDKLLEAAQSLLDDLGDTPSAHGRIQCAYALRDAEGKFSVRYIISQGANQPWGIW 77
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF--EGHPLRK 146
A + + V G W+ERE+ D+YGI F HP+ ++ GF PL+
Sbjct: 78 SVDASSGTLPSLANVLPLLG--WYEREIQDLYGITFTDHPEPYPLILHEGFIPAKPPLQT 135
Query: 147 DF-----PVTGFVE 155
F P+ G E
Sbjct: 136 GFDPKAEPIRGQAE 149
>gi|282856068|ref|ZP_06265354.1| NADH dehydrogenase [Pyramidobacter piscolens W5455]
gi|282586089|gb|EFB91371.1| NADH dehydrogenase [Pyramidobacter piscolens W5455]
Length = 197
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 18/153 (11%)
Query: 10 DYIVNSFSGSVRFAVN----------SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIID 59
+++ + F +V S L L V + L L F +
Sbjct: 34 EFLRSRFGDAVTETELREYKEGVCQYSRWHLLLTVRRERFLDLVDAL---GELDFPHFHV 90
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVA---EGKSVPSIVGIYPGADWFEREV 116
G D + F R L V + V +PS+ G PG + ERE+
Sbjct: 91 ASGNDDGDTIRQIYHFSLFRREGRGRELTVTVTVRVPKTDLVMPSLHGRNPGVGFSEREM 150
Query: 117 WDMYGIFFEGHPDLRRILTDYGFEGH--PLRKD 147
+M G+ +G P+ + G++ P R+D
Sbjct: 151 NEMLGVAHDGQPNTDLVFLPDGWDRTILPWRRD 183
>gi|328775178|gb|AEB39984.1| NADH dehydrogenase subunit 9 [Funaria hygrometrica]
Length = 77
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDF 65
+ ++ + + S E L + L L FL+ + F +ID+CGVD+
Sbjct: 4 QSFFKSLIATLPKWIHQFQKSKHENILYTNPDYLFQLLWFLKYHTNTRFRILIDICGVDY 63
Query: 66 LSRSNRFDVVYHF 78
SR RF+VVY+
Sbjct: 64 PSRKQRFEVVYNL 76
>gi|307696856|gb|ADN85869.1| NADH-ubiquinone oxidoreductase subunit 9 [Nyctotherus ovalis]
Length = 156
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 32 LDVDCGDLVSLCSFLRDDP---HCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
L + L LR C FV + +D + + + +
Sbjct: 26 LILTADQLYFALLLLRYSTLGWPCKFVALATHDLLDETYFNIYGFLANNHKQFGIYVLI- 84
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ VPS ++P A W ERE +M+GI + D R +L Y + HPL+K
Sbjct: 85 ------QQMRVPSASKLFPNAAWSERESAEMFGIRYTTAIDSRNLLLPYTMKQHPLKK 136
>gi|8928623|ref|NP_059428.1| NADH dehydrogenase subunit 9 [Paramecium aurelia]
gi|1019635|gb|AAA79260.1| P1 protein short form [Paramecium tetraurelia]
Length = 180
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 10/156 (6%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD-------- 73
+ + +L S L + +++ D +
Sbjct: 17 STTVNPNHYVCVLPSEAGQALASVLGGELFLAKSQLVEATAFDLTGQGAEAGDLLVFLRN 76
Query: 74 --VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV + + + R+ + G V S+ Y A+W ERE+ +M+ + R
Sbjct: 77 NGVVLSYSFYFFLLKKRITFFLHGGDKVSSLESFYSNANWLEREISEMFRGSNLLKKESR 136
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVY 167
+L DYG +P K FP TG E+ ++ +K Y
Sbjct: 137 NLLLDYGSSFNPFLKKFPSTGHAEVVFNSFLKTTAY 172
>gi|128864|sp|P15600|NDUS3_PARTE RecName: Full=NADH-ubiquinone oxidoreductase subunit 9; AltName:
Full=Protein P1
gi|578750|emb|CAA34058.1| unnamed protein product [Paramecium aurelia]
gi|1019634|gb|AAA79259.1| P1 protein long form [Paramecium tetraurelia]
Length = 209
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 10/156 (6%)
Query: 22 FAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFD-------- 73
+ + +L S L + +++ D +
Sbjct: 46 STTVNPNHYVCVLPSEAGQALASVLGGELFLAKSQLVEATAFDLTGQGAEAGDLLVFLRN 105
Query: 74 --VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR 131
VV + + + R+ + G V S+ Y A+W ERE+ +M+ + R
Sbjct: 106 NGVVLSYSFYFFLLKKRITFFLHGGDKVSSLESFYSNANWLEREISEMFRGSNLLKKESR 165
Query: 132 RILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVY 167
+L DYG +P K FP TG E+ ++ +K Y
Sbjct: 166 NLLLDYGSSFNPFLKKFPSTGHAEVVFNSFLKTTAY 201
>gi|331694633|ref|YP_004330872.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Pseudonocardia
dioxanivorans CB1190]
gi|326949322|gb|AEA23019.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Pseudonocardia
dioxanivorans CB1190]
Length = 504
Score = 51.5 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMY 120
G D V+ F+ P + R + + + G+ + + A FERE+ D++
Sbjct: 40 GHDDRPSGGGLRTVHLFVQPGADLRTELHVHLDPGRPALPSLAALSFPAGRFERELRDLF 99
Query: 121 GIFFEGHPDLRRILTDYGFE--GHPLRKD 147
GI GHP RR++ + + +P+ D
Sbjct: 100 GIEPVGHPLPRRLVRHFHWPRGWYPMLSD 128
>gi|197116468|ref|YP_002136895.1| carbon monoxide-induced hydrogenase subunit CooU [Geobacter
bemidjiensis Bem]
gi|197085828|gb|ACH37099.1| carbon monoxide-induced hydrogenase, CooU subunit [Geobacter
bemidjiensis Bem]
Length = 175
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
VPS+ I+ DW ERE+ ++Y I GHPD RR+ P
Sbjct: 101 VPSLTPIFRNCDWHERELMELYEIQVVGHPDPRRLFLADSVPDAPF 146
>gi|88603079|ref|YP_503257.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Methanospirillum
hungatei JF-1]
gi|88188541|gb|ABD41538.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Methanospirillum
hungatei JF-1]
Length = 519
Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 22 FAVNSVGELSLD--VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL 79
+ ++ V + ++ L ++ + ++ F + Y F
Sbjct: 16 EWLIGEDMTTISYAVPDERIRAVAETLLALES----RLVWIFCERE-AKDGSFVLRYVFE 70
Query: 80 SPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD--Y 137
+ + L + V + S+V IYP A FER + D +G+ F G PD RR+ Y
Sbjct: 71 LTEMRKYLVL---VLNTRMPESLVEIYPAASRFERAITDGFGLQFAGSPDTRRLFLHEAY 127
Query: 138 GFEGHPLRKD 147
+PL+K
Sbjct: 128 PDGFYPLKKS 137
>gi|162166|gb|AAA03749.1| NADH dehydrogenase [Trypanosoma brucei]
Length = 116
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTG 152
S ERE +D++G +F G+ L R+ D+ F G L K +P+ G
Sbjct: 29 CFSFSCFCYAFLLLERECFDLFGFYFVGNDILHRLFVDWFFVGFFLLKCYPLFG 82
>gi|283853522|ref|ZP_06370763.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio sp.
FW1012B]
gi|283571103|gb|EFC19122.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio sp.
FW1012B]
Length = 494
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLR--RILTDYGFEGHPLRK 146
A PS+ P WFERE+++ +GI +GHP L+ R T G G P R
Sbjct: 64 AFCRTAPLDRYPSLTPDCPQCHWFERELYEQWGILPDGHPWLKPIRFTTPPG-AGRP-RP 121
Query: 147 DFPVTGFVELHYDDKVKKVVYRPV 170
VT + ++ ++V +V PV
Sbjct: 122 APGVTDYFQVR-GEEVHEVAVGPV 144
>gi|57233682|ref|YP_182268.1| hydrogenase, group 4, HycE subunit, putative [Dehalococcoides
ethenogenes 195]
gi|57224130|gb|AAW39187.1| hydrogenase, group 4, HycE subunit, putative [Dehalococcoides
ethenogenes 195]
Length = 526
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD--YGFEGHPLRKDF--- 148
V SI I+P A +FERE+ D YG FE D RR+ Y HPL K F
Sbjct: 89 RTDSPVASIAAIFPSACYFEREIRDGYGCEFENAFDRRRLWLHETYPANFHPLVKSFKNQ 148
Query: 149 PVTGFVELHYDDKV---KKV----VYR 168
P++ + D+ + KKV VY
Sbjct: 149 PLSLPAGVE-DEALYPFKKVSGEGVYE 174
>gi|213584133|ref|ZP_03365959.1| formate hydrogenlyase subunit 5 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 248
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKD 147
REV DMYG+ G PD RR++ + +PLRKD
Sbjct: 1 REVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD 36
>gi|242278963|ref|YP_002991092.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
salexigens DSM 2638]
gi|242121857|gb|ACS79553.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
salexigens DSM 2638]
Length = 177
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFE 125
+ F + YH+ R+ ++ V + +PSI IY GADW ERE +D +G+ F
Sbjct: 57 DVAEGFLISYHYAHFTKPGRIAHRVLVCRDEAELPSISSIYQGADWHERECYDFHGVKFT 116
Query: 126 GH 127
GH
Sbjct: 117 GH 118
>gi|264684081|emb|CAP46292.1| NADH dehydrogenase [Asterella multiflora]
Length = 103
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 7/101 (6%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 62
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGIFFEGH 127
+K+ V+ I ++ AD+ ERE +DM GI ++ H
Sbjct: 63 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGISYDNH 103
>gi|242399880|ref|YP_002995305.1| Membrane-bound NADP+-reducing complex MBX, subunit MbxK
(dehydrogenase subunit) [Thermococcus sibiricus MM 739]
gi|242266274|gb|ACS90956.1| Membrane-bound NADP+-reducing complex MBX, subunit MbxK
(dehydrogenase subunit) [Thermococcus sibiricus MM 739]
Length = 175
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
+ + + + L++ F ++ + VD++ ++VY S + V
Sbjct: 30 IEFHIPAERIREFLTLLKES---NFETMMQITAVDWIKDGE-IELVYQMWSYTHAVHAFV 85
Query: 90 KIAVAEGK---SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR--ILTDYGFE-GHP 143
K + VPS+ IYP A+ +ER+ + Y + FEG+ L+ IL D E G
Sbjct: 86 KTRIPRDVDKARVPSVRDIYPVAETYERDAHEFYKVTFEGNDKLKMPWILEDEDKEAGVS 145
Query: 144 LRKDFPVTGFVELHY 158
RKDF + +V+ Y
Sbjct: 146 HRKDFDMLSYVKKKY 160
>gi|260076076|gb|ACX30954.1| NADH dehydrogenase subunit 9 [Euplotes minuta]
Length = 191
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 11/155 (7%)
Query: 30 LSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
L + + + + LR +++L L+++NR+ Y F P+
Sbjct: 37 LFIALGSEFIYHIALLLRYSSIFLPAQLVELFVSH-LAQANRYCTTYSFFLPRPAFSFFF 95
Query: 90 KIAVAEGKSVPSIVG----------IYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ + + + A W ERE +M G F D R +L +Y
Sbjct: 96 ITLSSAEFRIDPVTSSTRSHSSIDFFFDAAWWLERECTEMVGSVFSNKGDDRNLLLEYAN 155
Query: 140 EGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQ 174
PL + FP G E+ Y+ ++ + R L Q
Sbjct: 156 VYRPLVRVFPSFGIFEVIYNSFLRLLELRRTSLQQ 190
>gi|288961344|ref|YP_003451683.1| NADH dehydrogenase, subunit 9 [Azospirillum sp. B510]
gi|288913652|dbj|BAI75139.1| NADH dehydrogenase, subunit 9 [Azospirillum sp. B510]
Length = 170
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 78 FLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
R+ ++ S+ A W ERE+ D++ + F GHP+ ++
Sbjct: 74 IYHYIDEHRVINVKTRTRNGALASLAPFVRAASWAEREIRDLFAVEFPGHPNPVPLIRPD 133
Query: 138 G 138
G
Sbjct: 134 G 134
>gi|294340394|emb|CAZ88775.1| putative NADH dehydrogenase [Thiomonas sp. 3As]
Length = 532
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
P R+R + +++PS+ P W+ERE+ D+YG+ FEGHP+ ++ G
Sbjct: 87 PYKVWRVRP-----KDRTLPSLANKLPLLGWYEREMMDLYGLRFEGHPEPNPLVLHEGEP 141
Query: 141 GHP 143
P
Sbjct: 142 RDP 144
>gi|270308817|ref|YP_003330875.1| hydrogenase, HycE subunit [Dehalococcoides sp. VS]
gi|270154709|gb|ACZ62547.1| hydrogenase, HycE subunit [Dehalococcoides sp. VS]
Length = 526
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTD--YGFEGHPLRKDF--- 148
V S+ I+P A +FERE+ D YG FE D RR+ Y HPL K F
Sbjct: 89 RTDSPVASVAAIFPSACYFEREIRDGYGCEFENAFDRRRLWLHETYPANFHPLVKSFKNQ 148
Query: 149 PVTGFVELHYDDKV---KKV----VYR 168
P+ + D+ V KKV VY
Sbjct: 149 PLCLPARVE-DEAVYPFKKVSGEGVYE 174
>gi|296136160|ref|YP_003643402.1| hypothetical protein Tint_1702 [Thiomonas intermedia K12]
gi|295796282|gb|ADG31072.1| hypothetical protein Tint_1702 [Thiomonas intermedia K12]
Length = 532
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
P R+R E +++PS+ P W+ERE+ D+YG+ FEGHP+ ++ G
Sbjct: 87 PYKVWRVRP-----EDRTLPSLANKLPLLGWYEREMMDLYGLRFEGHPEPNPLVLHEGEP 141
Query: 141 GHP 143
P
Sbjct: 142 RDP 144
>gi|152990464|ref|YP_001356186.1| Ni-Fe hydrogenase, large subunit HycE [Nitratiruptor sp. SB155-2]
gi|151422325|dbj|BAF69829.1| Ni-Fe hydrogenase, large subunit HycE [Nitratiruptor sp. SB155-2]
Length = 454
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE-GHPLR 145
+ + + SI YP A WFER++ D +GI D R ++ F HP+R
Sbjct: 25 IEKTPIDKDNPEIESIAQAYPAAVWFERKMHDDFGIKILNTFDNRPLIHHERFPNIHPMR 84
Query: 146 KDF 148
K+F
Sbjct: 85 KEF 87
>gi|268679823|ref|YP_003304254.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sulfurospirillum
deleyianum DSM 6946]
gi|268617854|gb|ACZ12219.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sulfurospirillum
deleyianum DSM 6946]
Length = 164
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
++ ++ ++ N+ S L ++ + + F + + C
Sbjct: 1 MKHLQSNLTHLANTL-DIPTSFEISNDALWASIEDTNALE--EFAKGLQTMHARVCMITC 57
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
+ + + +N +L +K + +PSI ++ A+W ERE+ ++YG
Sbjct: 58 A--RVDEGHDILYHFDIKGVLFNLKLHLKTPL-----LPSITPLFESANWAERELSELYG 110
Query: 122 IFFEGHPDLRRILTDY 137
I E HP+ ++ D
Sbjct: 111 ITLENHPNPAKLFIDE 126
>gi|289433304|ref|YP_003463177.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dehalococcoides sp.
GT]
gi|288947024|gb|ADC74721.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Dehalococcoides sp.
GT]
Length = 526
Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 14/156 (8%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVG---ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
KI +L +Y+ S ++ G + L + D L +I L
Sbjct: 2 KIPELHNYLAEFLSPAINPLKLEKGANKDYYLWL---DWTEAA-ALYPKLAEDGFGLIGL 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GV+ ++Y F Y+ L + V SI I+P A +FERE+ D Y
Sbjct: 58 FGVEGFRGYQGLSLLYIFEKRNYSGTLVIIRRA--DSPVSSIAAIFPSACYFEREIRDGY 115
Query: 121 GIFFEGHPDLRRILTD--YGFEGHPLRKDF---PVT 151
G FE D RR+ Y HPL F P++
Sbjct: 116 GCEFENAFDRRRLFLHETYPANFHPLANSFKNQPLS 151
>gi|73749344|ref|YP_308583.1| hydrogenase, group 4, HycE subunit [Dehalococcoides sp. CBDB1]
gi|73661060|emb|CAI83667.1| hydrogenase, group 4, HycE subunit [Dehalococcoides sp. CBDB1]
Length = 526
Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 14/156 (8%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVG---ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
KI +L +Y+ S ++ G + L + D L +I L
Sbjct: 2 KIPELHNYLAEFLSPAINPLKLEKGANKDYYLWL---DWTEAA-ALYPKLAEDGFGLIGL 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GV+ ++Y F Y+ L + V SI I+P A +FERE+ D Y
Sbjct: 58 FGVEGFRGYQGLSLLYIFEKRNYSGTLVIIRRA--DSPVSSIAAIFPSACYFEREIRDGY 115
Query: 121 GIFFEGHPDLRRILTD--YGFEGHPLRKDF---PVT 151
G FE D RR+ Y HPL F P++
Sbjct: 116 GCEFENAFDRRRLFLHETYPANFHPLANSFKNQPLS 151
>gi|147669954|ref|YP_001214772.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Dehalococcoides sp.
BAV1]
gi|146270902|gb|ABQ17894.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Dehalococcoides sp.
BAV1]
Length = 526
Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 14/156 (8%)
Query: 4 KIEDLGDYIVNSFSGSVRFAVNSVG---ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
KI +L +Y+ S ++ G + L + D L +I L
Sbjct: 2 KIPELHNYLAEFLSPAINPLKLEKGANKDYYLWL---DWTEAA-ALYPKLAEDGFGLIGL 57
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
GV+ ++Y F Y+ L + V SI I+P A +FERE+ D Y
Sbjct: 58 FGVEGFRGYQGLSLLYIFEKRNYSGTLVIIRRA--DSPVSSIAAIFPSACYFEREIRDGY 115
Query: 121 GIFFEGHPDLRRILTD--YGFEGHPLRKDF---PVT 151
G FE D RR+ Y HPL F P++
Sbjct: 116 GCEFENAFDRRRLFLHETYPANFHPLANSFKNQPLS 151
>gi|171189252|gb|ACB42107.1| NADH dehydrogenase subunit J [Sophronitis virens]
Length = 116
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 52 CCFVNIIDLCGVDFLSRSNRFDVVY----HFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
+ + C D V + + K A PS+ I+
Sbjct: 31 YGYNYLRSQCTYDVSPGGFLASVYHLTKIRYGIDKPEEVCIKGFAPRSNPQTPSVFWIWR 90
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRI 133
AD+ ERE +DM GI++E HP L+RI
Sbjct: 91 SADFKERESYDMLGIYYENHPRLKRI 116
>gi|147920957|ref|YP_685235.1| [NiFe]-hydrogenase, large subunit (EchE-like) [uncultured
methanogenic archaeon RC-I]
gi|110620631|emb|CAJ35909.1| [NiFe]-hydrogenase, large subunit (EchE-like) [uncultured
methanogenic archaeon RC-I]
Length = 486
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 58 IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV-PSIVGIYPGADWFEREV 116
+ GVD R D + F + ++ + V S+ + P ADW ERE+
Sbjct: 1 MYATGVDKGVAGIRVDYYFGFDHLEPGCHTILRTFLDRENPVLKSVTTLTPQADWSEREM 60
Query: 117 WDMYGIFFEGHPDLRRILTDYGFE 140
+ G+ E HPD R + +E
Sbjct: 61 IEFLGVRAEEHPDPRHLWLPLNWE 84
>gi|73917332|gb|AAZ93517.1| NADH dehydrogenase subunit 9 [Phytophthora sojae]
Length = 52
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ +C F
Sbjct: 1 MKLLQKFSQYLLQILP--IINYTLYKNELCINIPTNKLIPILFFLKNHTNCQFK 52
>gi|73917320|gb|AAZ93509.1| NADH dehydrogenase subunit 9 [Phytophthora alni subsp. alni]
gi|73917323|gb|AAZ93511.1| NADH dehydrogenase subunit 9 [Phytophthora cambivora]
gi|73917326|gb|AAZ93513.1| NADH dehydrogenase subunit 9 [Phytophthora europaea]
gi|73917329|gb|AAZ93515.1| NADH dehydrogenase subunit 9 [Phytophthora pistaciae]
Length = 52
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ +C F
Sbjct: 1 MKLLQKFSQYLLQILP--IINYTLYKNELCINISTNKLIPILFFLKNHTNCQFK 52
>gi|325529421|gb|EGD06342.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Burkholderia sp.
TJI49]
Length = 495
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 12/86 (13%)
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAE------------GKSVPSIVGIYPGA 109
L+ R VY + S RLR VPS+ + P
Sbjct: 18 AQQLLANGGRMQGVYAWYSASGRARLRYVATRPGYETCLGWSVDVGDDPVPSLAAVCPLL 77
Query: 110 DWFEREVWDMYGIFFEGHPDLRRILT 135
W ERE+ +M GI F GHP+ R++T
Sbjct: 78 GWQEREIMEMSGIAFFGHPEPERLVT 103
>gi|119719978|ref|YP_920473.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Thermofilum pendens
Hrk 5]
gi|119525098|gb|ABL78470.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Thermofilum pendens
Hrk 5]
Length = 537
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ V + L + + ++ + VD + + R
Sbjct: 10 VQVPPEGIREAVRRLVAE---GYAHLTAITAVDLQDSIE----LIYHFDGGGGYRHVSVK 62
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY---GFEGHPLRKD 147
++PSI + PGAD++E+EV D++G+ F+ + RR + PL KD
Sbjct: 63 LPRANPTLPSIAQVVPGADYYEKEVRDLFGVNFQDGAEKRRFILPECYPPDAPPPLLKD 121
>gi|218883729|ref|YP_002428111.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Desulfurococcus
kamchatkensis 1221n]
gi|218765345|gb|ACL10744.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Desulfurococcus
kamchatkensis 1221n]
Length = 147
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 11/151 (7%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M K+ + Y+ + + + + + + + +
Sbjct: 1 MEEKLSFMDKYV-------IEKGFVKPNRRLFTIRSEHVRQVFTEFIEKLGRENFYLSTI 53
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMY 120
G D Y L P+ + + V SI+ + PGA E E +D+
Sbjct: 54 VGTDMKDEGRIRLDYYVVLLPEEETIVIRTYLPRDNPVVDSIIDLLPGALSGECETYDLL 113
Query: 121 GIFFEGHPDLRR-ILTDYG---FEGHPLRKD 147
G+ F+G+ L+R + +PLRKD
Sbjct: 114 GVVFKGNSFLKRGFFIPQDLVEQDRYPLRKD 144
>gi|264684083|emb|CAP46293.1| NADH dehydrogenase [Reboulia hemisphaerica]
Length = 30
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
ERE +DM GI ++ HP L+RIL + G
Sbjct: 1 QERESYDMLGISYDNHPRLKRILMPESWIG 30
>gi|164452444|gb|ABY57063.1| NADH dehydrogenase subunit J [Asplenium adiantum-nigrum]
Length = 109
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D V + P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGPLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMYGIFFEG 126
KI V + +PS+ ++ +D ERE +DM GI +EG
Sbjct: 70 CTKIFVPRKEPKIPSVYWVWKSSDLQERESYDMLGIIYEG 109
>gi|260076113|gb|ACX30990.1| NADH dehydrogenase subunit 9 [Moneuplotes crassus]
Length = 191
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 96 GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVE 155
S SI + A W ERE +M G F D R +L +Y PL + FP G E
Sbjct: 112 CYSPLSIDFFFDAAWWLERECTEMVGTAFAAKGDDRNLLLEYANIYKPLVRTFPSFGLFE 171
Query: 156 LHYD 159
+ Y+
Sbjct: 172 VIYN 175
>gi|126464932|ref|YP_001040041.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Staphylothermus
marinus F1]
gi|126013755|gb|ABN69133.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Staphylothermus
marinus F1]
Length = 148
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 11/150 (7%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLC 61
K+ L Y V + GDL SL L D+ + ++
Sbjct: 3 SDKLSFLRKY-------FVSEEMVKPNRKVFVFKAGDLRSLFKDLIDNIGLENFYVSNII 55
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
DF + Y L P + + + +++ + PG E EV+D+ G
Sbjct: 56 ATDFKDQGKIRLDYYVVLLPGEEVVVFRTFIPRDKPEIDTLLDMIPGVLNAEAEVYDLMG 115
Query: 122 IFFEGHPDLRR---ILTDYGFEG-HPLRKD 147
I F G+ LRR + D +G +PLRKD
Sbjct: 116 IVFRGNNTLRRGFFVPVDLVEKGIYPLRKD 145
>gi|307721953|ref|YP_003893093.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sulfurimonas
autotrophica DSM 16294]
gi|306980046|gb|ADN10081.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sulfurimonas
autotrophica DSM 16294]
Length = 455
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDFPVT 151
+ + ++ +P A WFER++ D +GI E D R ++ F HP+ KDF
Sbjct: 32 RKKPIIKTLSHEHPAALWFERKIQDDFGIIVEDAFDKRPLVHQEQFPKNLHPMCKDFD-- 89
Query: 152 GFVELHYDDKV 162
EL + +
Sbjct: 90 -KQELEFSEFQ 99
>gi|255021536|ref|ZP_05293579.1| Ni,Fe-hydrogenase III large subunit [Acidithiobacillus caldus ATCC
51756]
gi|254968924|gb|EET26443.1| Ni,Fe-hydrogenase III large subunit [Acidithiobacillus caldus ATCC
51756]
Length = 527
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG-KSVPSIVGIYPGADWFEREVWDMYGIF 123
+ + H + L + + + PS+ ++P A ER + D+ G+
Sbjct: 61 WGEHQDTAGANIHAFFLTESGYLWCTLPLPANLREFPSLSSVFPTACRQERAIRDLLGLE 120
Query: 124 FEGHPDLRRILTDYGFEG--HPL 144
G+PD+R L + HPL
Sbjct: 121 PLGNPDMRPWLRHAAWPANIHPL 143
>gi|164512978|emb|CAP11582.1| NADH dehydrogenase subunit J [Isoetes engelmannii]
Length = 111
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 33/101 (32%), Gaps = 7/101 (6%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSPKYNRRLRVK 90
+ D S+ L + + C D V + + +K
Sbjct: 14 IKSEDWPSIAVILYV---YGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIK 70
Query: 91 IAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEGHPDL 130
+ V I+ AD+ ERE +DM GI E HP L
Sbjct: 71 VFAPRRDPRIPSVFWIWKSADFQERESYDMLGIIHESHPRL 111
>gi|239905428|ref|YP_002952167.1| putative hydrogenase-4 component G [Desulfovibrio magneticus RS-1]
gi|239795292|dbj|BAH74281.1| putative hydrogenase-4 component G [Desulfovibrio magneticus RS-1]
Length = 494
Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ L + RL V PS+ P A FEREV + +GI +GH
Sbjct: 43 PCPGGVGLCCLLGRDADGRLAFLRQVPAES-YPSLTPDCPQAHLFEREVHEQWGIVPQGH 101
Query: 128 PDLRRILTDYGFEGHPLRKDFP 149
P L+ + F G P R + P
Sbjct: 102 PWLKPV----RFTGCPARPEEP 119
>gi|148262961|ref|YP_001229667.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Geobacter
uraniireducens Rf4]
gi|146396461|gb|ABQ25094.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Geobacter
uraniireducens Rf4]
Length = 507
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ + G+S PSI P A+ FERE+ + +GI EGHP + + F HP R
Sbjct: 68 VMGIMRTQCGESFPSITPYCPQANLFEREIAEQFGIVPEGHPWFKPVRFHRSF--HPAR 124
>gi|73917290|gb|AAZ93489.1| NADH dehydrogenase subunit 9 [Phytophthora nicotianae]
Length = 52
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MKILKKFSQYLLQILP--IINYTLYKNELCINISSNKLIPILFFLKNHTNSQFK 52
>gi|167843295|gb|ACA03551.1| NADH dehydrogenase subunit 9 [Dictyostelium purpureum]
Length = 79
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 27/63 (42%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS 67
+G+ + ++ + + + DL+++ ++++ F ++D+ VD L+
Sbjct: 10 IGEQLRKYMPKQIKKITYKPNYIEVYIQKEDLITVLEIVKNNTKSQFKMLLDIVCVDCLN 69
Query: 68 RSN 70
Sbjct: 70 VEE 72
>gi|197119558|ref|YP_002139985.1| Ech-hydrogenase-like complex large subunit [Geobacter bemidjiensis
Bem]
gi|197088918|gb|ACH40189.1| Ech-hydrogenase-related complex, large subunit [Geobacter
bemidjiensis Bem]
Length = 503
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
Y LS K + L + G S PS+V P FERE+ + +GI FEGHP L+ +
Sbjct: 56 YCILSFKSHAALGIMSTTVTGNSFPSLVEAVPQLHLFEREIAEQFGICFEGHPWLKPV 113
>gi|220904048|ref|YP_002479360.1| NAD-dependent dehydrogenase subunit [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868347|gb|ACL48682.1| NAD-dependent dehydrogenase subunit [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 565
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 53 CFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWF 112
+D D + + R + + S+ P +F
Sbjct: 44 DMDAPLDAHNDDTPEQPRAVSLCCILAH--DGTRRLMARCTPPVTAFVSMTPELPQLHYF 101
Query: 113 EREVWDMYGIFFEGHPDLR--RILTD 136
ERE+++ +G+ GHP L+ R + D
Sbjct: 102 EREIYEQWGVEPVGHPWLKSVRRIPD 127
>gi|73917335|gb|AAZ93519.1| NADH dehydrogenase subunit 9 [Phytophthora cinnamomi]
Length = 52
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MKLLQKFSQYLLQILP--IINYTLYKNELCINISTNKLIPILFFLKNHTNSQFK 52
>gi|253699703|ref|YP_003020892.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacter sp. M21]
gi|251774553|gb|ACT17134.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacter sp. M21]
Length = 503
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y LS K + L + GKS PS+V P FERE+ + +GI FEGHP L+ +
Sbjct: 56 YCILSFKSHAALGIMSTAVTGKSFPSLVLAAPQLHLFEREIAEQFGISFEGHPWLKPVRF 115
Query: 136 DYGF 139
+ F
Sbjct: 116 EAPF 119
>gi|73917308|gb|AAZ93501.1| NADH dehydrogenase subunit 9 [Phytophthora capsici]
Length = 52
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MKILKKFSQYLLQILP--IINYTLYKNELCINISTKKLIPILFFLKNHTNSQFK 52
>gi|73917287|gb|AAZ93487.1| NADH dehydrogenase subunit 9 [Phytophthora infestans]
Length = 52
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + F ++ + F
Sbjct: 1 MKILKKFSQYLLQILP--IINYTLYKNELCINISSDKLIPILFFFKNHTNTQFK 52
>gi|332295487|ref|YP_004437410.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermodesulfobium
narugense DSM 14796]
gi|332178590|gb|AEE14279.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermodesulfobium
narugense DSM 14796]
Length = 155
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR--ILTDYGFEGHPLRK 146
SI IYP A+W ERE ++M+GI F + D++ +LT PL K
Sbjct: 87 FTSITSIYPNANWGERECFEMFGIDFSDNKDIKNGLLLTSQKDLKTPLLK 136
>gi|296134446|ref|YP_003641693.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermincola sp. JR]
gi|296033024|gb|ADG83792.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Thermincola potens
JR]
Length = 178
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 95 EGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYG 138
+ +S+ SI I ADW ERE+ ++Y + GHP+ + + G
Sbjct: 97 DDRSIKSITPILKSADWHEREMQELYPVKVLGHPNPQPLFLAEG 140
>gi|73917299|gb|AAZ93495.1| NADH dehydrogenase subunit 9 [Phytophthora katsurae]
Length = 52
Score = 43.8 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MKVLKKFSQYLLQILP--IINYTLYKNELCINISTNKLIPILFFLKNHTNSHFK 52
>gi|264684007|emb|CAP46255.1| NADH dehydrogenase [Araucaria angustifolia]
Length = 99
Score = 43.8 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 7/96 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRL 87
+L + D S+ L + + C D V + +
Sbjct: 6 TLQIKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEV 62
Query: 88 RVKIAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+K+ V+ I ++ AD+ ERE +DM GI
Sbjct: 63 CIKVFVSRKNPRIPSIFWVWKSADFQERESYDMLGI 98
>gi|209515025|ref|ZP_03263894.1| putative formate hydrogenlyase subunit [Burkholderia sp. H160]
gi|209504651|gb|EEA04638.1| putative formate hydrogenlyase subunit [Burkholderia sp. H160]
Length = 519
Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 9/133 (6%)
Query: 19 SVRFAVNSVGELSLDV---DCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVV 75
+V+ G++S+ + D + L R + ++ + G + + +
Sbjct: 9 AVKRLTRRAGQISVGIVDADESGWLELARTARSEQG----RLVAMWGSEAVEGGFSVNAA 64
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILT 135
Y RL + G + P +V ++P A +R ++D+ G+ G D R L
Sbjct: 65 YECEDGILWARLAIGREQDAGGAYPDLVPVFPCAIRMQRAIFDLIGLRARGAEDTRPWLN 124
Query: 136 DYGFEG--HPLRK 146
+ G PL++
Sbjct: 125 HGNWPGDYFPLQR 137
>gi|73917296|gb|AAZ93493.1| NADH dehydrogenase subunit 9 [Phytophthora quercina]
Length = 52
Score = 43.4 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MKILKKFSQYLLQILP--IINYTLYKNELCINISTNKLIPILFFLKNHTNSHFK 52
>gi|73917314|gb|AAZ93505.1| NADH dehydrogenase subunit 9 [Phytophthora inundata]
Length = 52
Score = 43.4 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ + Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MKLLTQFSKYLLQILP--IINYTLYKNELCINIPTKKLIPILIFLKNHTNSQFK 52
>gi|73917311|gb|AAZ93503.1| NADH dehydrogenase subunit 9 [Phytophthora psychrophila]
Length = 52
Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MQILKKFSQYLLQILP--IISFTLYKNELCINILTNKLIPILFFLKNHTNSQFK 52
>gi|78223794|ref|YP_385541.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Geobacter
metallireducens GS-15]
gi|78195049|gb|ABB32816.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Geobacter
metallireducens GS-15]
Length = 506
Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 7/113 (6%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
++ D+ + D + + + S+ V K RL
Sbjct: 18 EIPPVDINEFLQGILDSVDRGWRIVSY---FGIPAPSSTALVCILAN--KAEGRLAAART 72
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
VPS+ + FERE+ + G+ F+GHP + + + F P R
Sbjct: 73 ETSDSHVPSLSSLITQVQLFEREIAEQCGLIFDGHPWFKPVRFHHSFV--PGR 123
>gi|152991859|ref|YP_001357580.1| Ni-Fe hydrogenase, large subunit HycE [Sulfurovum sp. NBC37-1]
gi|151423720|dbj|BAF71223.1| Ni-Fe hydrogenase, large subunit HycE [Sulfurovum sp. NBC37-1]
Length = 455
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
R F++V F S + + V + ++ +P A WFER++ D +GI E
Sbjct: 10 EREGTFEIVTVFESETQRETISKENPV-----IRTLAKKHPSAIWFERKMSDDFGIVIED 64
Query: 127 HPDLRRILTDYGFEG--HPLRKDF 148
D R +L F HP++K F
Sbjct: 65 AFDKRPLLHQERFPKAIHPMQKAF 88
>gi|303325432|ref|ZP_07355875.1| NAD-dependent dehydrogenase subunit [Desulfovibrio sp. 3_1_syn3]
gi|302863348|gb|EFL86279.1| NAD-dependent dehydrogenase subunit [Desulfovibrio sp. 3_1_syn3]
Length = 318
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 62 GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYG 121
S + R+ + + S+ P FERE+++ +G
Sbjct: 46 AARGPDASGPVGLCCVLGH--DAARMLTVLRTPPLERFDSLTPDCPQVHLFEREIYEQWG 103
Query: 122 IFFEGHPDL---RRILTDYGFEG 141
+ GHP L RR T G G
Sbjct: 104 VEPVGHPWLKAVRR--TPDGMRG 124
>gi|73917305|gb|AAZ93499.1| NADH dehydrogenase subunit 9 [Phytophthora ramorum]
Length = 52
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 5/54 (9%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ +++ + EL +++ L+ + F ++ F
Sbjct: 1 MKLLKKFSQHLLQILP--IINYTLYKNELCINISRNKLIPVLFFFKNHTTSQFK 52
>gi|117927936|ref|YP_872487.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Acidothermus
cellulolyticus 11B]
gi|117648399|gb|ABK52501.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Acidothermus
cellulolyticus 11B]
Length = 499
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149
P++ + P A W+ER++ D++G+ GHP L ++ PLR+ P
Sbjct: 65 YPALSAVVPAASWYERKIHDLFGLEPLGHPRLDPLIL-------PLREAQP 108
>gi|320450491|ref|YP_004202587.1| hydrogenase-4 subunit G [Thermus scotoductus SA-01]
gi|320150660|gb|ADW22038.1| hydrogenase-4, subunit G [Thermus scotoductus SA-01]
Length = 443
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDL---RRILTDYGFEGHPLRKDFPV----T 151
PS+ +P DWFER +W+ G GHP L RR Y F PL + PV
Sbjct: 51 FPSLAAEFPALDWFERALWER-GFEPVGHPGLKPLRRHDLPYTFREFPLLHEVPVGPVHA 109
Query: 152 GFVE---LHYDDKVKKVVYRPVELMQEHRDYDFLSPWEGVNSLF 192
G +E + +++V + L +HR L P +G +
Sbjct: 110 GIIEPGHFRFSVLGERIVNLEIRLGYQHRGLLSLMPGKGAEAAL 153
>gi|182679429|ref|YP_001833575.1| NADH dehydrogenase (quinone) [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635312|gb|ACB96086.1| NADH dehydrogenase (quinone) [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 492
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 13/114 (11%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ VD +++ + L D V + + V
Sbjct: 8 IVVDEETWLTVATALAGGQAVLLGLWGDAQAVHMAMLEDGANEPV------------VTT 55
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE-GHPL 144
+ PS+ ++ A ER + D++G+ G PD R L ++ GHPL
Sbjct: 56 FMCADGRFPSVGRLHAPAIRPERAIHDLFGLDPMGLPDERPWLDHGRWDIGHPL 109
>gi|46805103|dbj|BAD17342.1| putative rice chloroplast ORF159 [Oryza sativa Japonica Group]
Length = 160
Score = 42.3 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 25 NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVY---HFLSP 81
+ G +L + D S+ L + + C D + V +
Sbjct: 23 DHRGIETLQIKAEDWDSIAVILYV---YGYNYLRSQCPYDVAPGGSLASVYHLTRIQYGI 79
Query: 82 KYNRRLRVKIAVAEGKSVPSIV-GIYPGADWFEREVWDMYGIFFEG 126
+ +K+ + V I+ +D+ ERE +DM GI ++
Sbjct: 80 DNPEEVCIKVFAQKDNPRIPSVFWIWRSSDFQERESFDMVGISYDN 125
>gi|73917302|gb|AAZ93497.1| NADH dehydrogenase subunit 9 [Phytophthora lateralis]
Length = 52
Score = 42.3 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 5/54 (9%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ +++ + EL +++ L+ + F ++ F
Sbjct: 1 MKLLKKFSQHLLKILP--IINYTLYKNELCINISKNKLIPILFFFKNHTSSQFK 52
>gi|83592760|ref|YP_426512.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rhodospirillum
rubrum ATCC 11170]
gi|1515470|gb|AAC45120.1| CooU [Rhodospirillum rubrum]
gi|83575674|gb|ABC22225.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Rhodospirillum
rubrum ATCC 11170]
Length = 172
Score = 41.9 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ VK+ V G S+ SI+ ++ ADW ERE + Y I + D +R+ D EG + +
Sbjct: 85 VTVKVWVVSGGSIDSIMTLFRNADWHEREFMEFYKIEVKDRADAKRLFLDESIEGGAMER 144
Query: 147 DFPVT 151
P++
Sbjct: 145 LIPLS 149
>gi|198283918|ref|YP_002220239.1| NADH-ubiquinone oxidoreductase chain 49kDa [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218665490|ref|YP_002426552.1| hydrogenase-4, G subunit [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198248439|gb|ACH84032.1| NADH-ubiquinone oxidoreductase chain 49kDa [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218517703|gb|ACK78289.1| hydrogenase-4, G subunit [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 515
Score = 41.9 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 48 DDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYP 107
++ H ++ L G D + + V FLS + L I S PS+ I+P
Sbjct: 36 ENIHAQGGRLLALWGEDRRTEEPGYLVHAAFLS-ETGIVLTEMIVDPAAASCPSLAAIFP 94
Query: 108 GADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRKDF 148
GA ER ++D+ GI G+ D R L + PLR DF
Sbjct: 95 GALRMERALYDLLGIR-AGNGDTRPWLRHAAWPADQFPLRTDF 136
>gi|269215530|ref|ZP_06159384.1| Ech Hydrogenase [Slackia exigua ATCC 700122]
gi|269131017|gb|EEZ62092.1| Ech Hydrogenase [Slackia exigua ATCC 700122]
Length = 206
Score = 41.9 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Query: 26 SVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNR 85
+ +D+ L ++ + D FV ++ DV+Y F+
Sbjct: 2 AFDSTFVDIPVDRLHAVAQE-KHDEGFRFVQMLCRMA------DPGIDVIYTFMKDGAVE 54
Query: 86 RLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
++ +E ++VPSI ++ A E E D++G+ EG
Sbjct: 55 NYALRSVDSETQAVPSISDLFMAAFANENEAHDLFGLNVEG 95
>gi|255021730|ref|ZP_05293770.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Acidithiobacillus
caldus ATCC 51756]
gi|254968870|gb|EET26392.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Acidithiobacillus
caldus ATCC 51756]
Length = 466
Score = 41.9 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE 140
+ +++PS+ I P W+ERE+ D+ G+ F HP+ ++ GF
Sbjct: 34 IRGEETLPSLAAIVPLLGWYEREMQDLGGLTFTDHPEPFPLVIHEGFS 81
>gi|317485985|ref|ZP_07944840.1| respiratory-chain NADH dehydrogenase [Bilophila wadsworthia 3_1_6]
gi|316922758|gb|EFV43989.1| respiratory-chain NADH dehydrogenase [Bilophila wadsworthia 3_1_6]
Length = 186
Score = 41.9 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFERE 115
+ + ++ + YHF Y + V + AE +I + ADW ERE
Sbjct: 60 RLCTVTALNKQLAEPVTTLAYHFDVHGYTVTVTVPLDPAENSVP-TITPWFRNADWNERE 118
Query: 116 VWDMYGIFFEGHPDLRRILTDYG 138
+++ + +G+ + +R+ D
Sbjct: 119 FAELFDVHVDGNTNPKRLFLDPE 141
>gi|222054797|ref|YP_002537159.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacter sp.
FRC-32]
gi|221564086|gb|ACM20058.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacter sp.
FRC-32]
Length = 507
Score = 41.5 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
N ++ + + L + + PSI P A+ FERE+ + +GI EG
Sbjct: 48 GEGNPAELNLYVVLTARADGLIGVMRSKCSGNFPSITPYCPQANLFEREIAEQFGIVPEG 107
Query: 127 HPDLRRILTDYGFE 140
HP + + F
Sbjct: 108 HPWFKPLRFHQSFR 121
>gi|73917317|gb|AAZ93507.1| NADH dehydrogenase subunit 9 [Phytophthora megasperma]
Length = 52
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ + Y++ + EL +++ L+ + FL++ + F
Sbjct: 1 MKLLTKFSQYLLQILP--IINYTLYKNELCINIPTKKLIPILFFLKNHTNSLFK 52
>gi|182414282|ref|YP_001819348.1| NADH-ubiquinone oxidoreductase chain 49kDa [Opitutus terrae PB90-1]
gi|177841496|gb|ACB75748.1| NADH-ubiquinone oxidoreductase chain 49kDa [Opitutus terrae PB90-1]
Length = 499
Score = 41.5 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 29/76 (38%)
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ ++ L V + S P++ P A FEREVW+ +G+
Sbjct: 47 FGVPEPGGETTRLVAVVAADAENTLMVGRSEPLRGSYPALTARCPQAHLFEREVWEQHGL 106
Query: 123 FFEGHPDLRRILTDYG 138
EGHP L+ +
Sbjct: 107 VPEGHPWLKPVRRPQD 122
>gi|308271020|emb|CBX27630.1| hypothetical protein N47_H24520 [uncultured Desulfobacterium sp.]
Length = 513
Score = 41.1 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
Query: 65 FLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFF 124
++ P L + + S+ P A WFERE+ +++ I
Sbjct: 61 RPENDGPLRMIAVLSRPSSGDLLLTSCDLPDPWP--SLTPDCPAAHWFEREIAEIWQIRP 118
Query: 125 EGHPDLR--RILTDYGFEGH 142
+ HP L+ R L + H
Sbjct: 119 KDHPWLKPIRFLHSHETNFH 138
>gi|89902049|ref|YP_524520.1| NADH-ubiquinone oxidoreductase subunit 49kDa [Rhodoferax
ferrireducens T118]
gi|89346786|gb|ABD70989.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Rhodoferax
ferrireducens T118]
Length = 498
Score = 40.7 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
D+ L L L ++ L G VV L P + ++
Sbjct: 14 DIAATSLQELMQ-LCGQRLQAGERLLTLFGRPAPELGVNIIVVTAVLQPAQGALVILRAT 72
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
G+ + +P A FERE+W+ G+F + HP L+ +
Sbjct: 73 AQRGEHYRCLTAQHPAAQIFERELWEQTGLFPDDHPWLKPV 113
>gi|220904935|ref|YP_002480247.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869234|gb|ACL49569.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 155
Score = 40.7 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 54 FVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFE 113
F + + + L + V + + +++ V +PSI IY A E
Sbjct: 43 FYHFDENLTMSDLRHNPEMCV---WSPTDAKGMVHLRMDVDRNMPIPSISSIYFCAVLIE 99
Query: 114 REVWDMYGIFFEGHP 128
E D +G+ F G P
Sbjct: 100 NETQDQFGVRFAGLP 114
>gi|264684009|emb|CAP46256.1| NADH dehydrogenase [Araucaria araucana]
Length = 91
Score = 40.7 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHF---LSPKYNRRLRVK 90
+ D S+ L + + C D V + + +K
Sbjct: 1 IKPEDWHSIAVILYV---YGYNYLRFQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIK 57
Query: 91 IAVAEGKSVPS-IVGIYPGADWFEREVWDMYGI 122
+ V+ I ++ AD+ ERE +DM GI
Sbjct: 58 VFVSRKNPRIPSIFWVWKSADFQERESYDMLGI 90
>gi|297567776|ref|YP_003686747.1| hypothetical protein Mesil_3430 [Meiothermus silvanus DSM 9946]
gi|296852225|gb|ADH65239.1| hypothetical protein Mesil_3430 [Meiothermus silvanus DSM 9946]
Length = 513
Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
V S PS+ +P DWFERE+W+ +G+ EGHP L+ +
Sbjct: 86 FRVEAQGSFPSLAEEFPALDWFERELWEDHGLVPEGHPSLKPL 128
>gi|297567575|ref|YP_003686546.1| hypothetical protein Mesil_3217 [Meiothermus silvanus DSM 9946]
gi|296852024|gb|ADH65038.1| hypothetical protein Mesil_3217 [Meiothermus silvanus DSM 9946]
Length = 513
Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
V S PS+ +P DWFERE+W+ +G+ EGHP L+ +
Sbjct: 86 FRVEAQGSFPSLAEEFPALDWFERELWEDHGLVPEGHPSLKPL 128
>gi|256830387|ref|YP_003159115.1| NADH-ubiquinone oxidoreductase chain 49kDa [Desulfomicrobium
baculatum DSM 4028]
gi|256579563|gb|ACU90699.1| NADH-ubiquinone oxidoreductase chain 49kDa [Desulfomicrobium
baculatum DSM 4028]
Length = 493
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 60 LCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDM 119
V L + + ++ S+ +P A FEREVW+
Sbjct: 44 CSWFGVPDHDGTILVAVLALDSESILGVARSEPISGSYP--SLTPKHPQAHLFEREVWEQ 101
Query: 120 YGIFFEGHPDLRRI 133
+G+ GHP L+ +
Sbjct: 102 HGLVPVGHPWLKPV 115
>gi|91780243|ref|YP_555450.1| putative NADH-ubiquinone oxidoreductase subunit [Burkholderia
xenovorans LB400]
gi|91692903|gb|ABE36100.1| Putative NADH-ubiquinone oxidoreductase subunit [Burkholderia
xenovorans LB400]
Length = 522
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF--EGHPLRK 146
P + ++P A +R V+D+ G+ G D R L + + HPLRK
Sbjct: 90 YPDLSAVFPCATRMQRAVYDLLGLRAIGAEDTRPWLNHGNWAADYHPLRK 139
>gi|303247449|ref|ZP_07333721.1| putative hydrogenase-4 component G [Desulfovibrio fructosovorans
JJ]
gi|302491145|gb|EFL51037.1| putative hydrogenase-4 component G [Desulfovibrio fructosovorans
JJ]
Length = 494
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
PS+ P FERE+++ + I EGHP L+ + F HP
Sbjct: 73 YPSLTPECPQCHLFERELFEQWEIRPEGHPWLKPVRFAPSFP-HP 116
>gi|73917293|gb|AAZ93491.1| NADH dehydrogenase subunit 9 [Phytophthora palmivora]
Length = 52
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 2 VRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
++ ++ Y++ + EL +++ L+ + F ++ + F
Sbjct: 1 MKVLKKFSQYVLQILP--IINYTLYKNELCINISTNKLIPILFFFKNHTNSHFK 52
>gi|302879582|ref|YP_003848146.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Gallionella
capsiferriformans ES-2]
gi|302582371|gb|ADL56382.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Gallionella
capsiferriformans ES-2]
Length = 514
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF--EGHPLRKDFP 149
P I I+P A+ +R V+D+ G+ D RR L + + PLRKDF
Sbjct: 82 YPDISRIFPSANRMQRAVYDLLGMTALQAADQRRWLRHAAWASDSFPLRKDFD 134
>gi|154149576|ref|YP_001403194.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Candidatus
Methanoregula boonei 6A8]
gi|153998128|gb|ABS54551.1| NADH dehydrogenase (ubiquinone), 30 kDa subunit [Methanoregula
boonei 6A8]
Length = 122
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+ ++ + +LV+ + L++D C V I D + FD + + +
Sbjct: 6 QTTIPISIDELVARTAQLKND-GCRLVQIGCTQVGDDFEINYVFDKDFVLTNLRIT---- 60
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
V + +PS+ G++ GA +E E+ D+YGI +G + F GH R
Sbjct: 61 ----VKQDTIIPSVSGVFFGAFVYENEIHDLYGITVKG--------MNIDFNGHFYR 105
>gi|251772760|gb|EES53322.1| putative hydrogenase-3 subunit (HycE) [Leptospirillum
ferrodiazotrophum]
Length = 512
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
PS+ I+P A FER + D++G+ +G DLR + + PL
Sbjct: 84 FPSLSSIFPPAARFERTIHDLFGLIPDGLADLRPWIDHGLWSHPPL 129
>gi|307352627|ref|YP_003893678.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methanoplanus
petrolearius DSM 11571]
gi|307155860|gb|ADN35240.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Methanoplanus
petrolearius DSM 11571]
Length = 142
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 19/139 (13%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+L ++ G+L+ + D V I D + FD F + +
Sbjct: 6 QLIREISVGELLDEVKA-KSDDGYRLVQIGCTRIEDAFEINYSFDKENRFENLRVT---- 60
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD- 147
+ E ++PSI IY GA +E E+ D+YGI EG + F G+ +
Sbjct: 61 ----IGEDVTMPSISDIYWGAFIYENEMHDLYGIPVEG--------MNIDFNGYLFKTSI 108
Query: 148 -FPVTGFVELHYDDKVKKV 165
P G V + K V
Sbjct: 109 PHPFRGEVTVKKVPAKKAV 127
>gi|322419367|ref|YP_004198590.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacter sp. M18]
gi|320125754|gb|ADW13314.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Geobacter sp. M18]
Length = 134
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 11/128 (8%)
Query: 21 RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLS 80
+ V +VS + + FV + D + FD S
Sbjct: 3 NSVRVLSDHNTSTVPVERVVSFSRIFK-ETGFRFVTMSSSDLGDAIDLIYHFDKELDIRS 61
Query: 81 PKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP-DLR-RILTDYG 138
+ V +G ++ SI +Y A E E+ + +G+ FEG P D + D
Sbjct: 62 MRVV--------VPKGSAISSITSVYSCAMLVENEIKEQFGVEFEGLPIDFNGTLYLDED 113
Query: 139 FEGHPLRK 146
+ P K
Sbjct: 114 VQRTPFCK 121
>gi|312136851|ref|YP_004004188.1| NADH-ubiquinone oxidoreductase chain 49kda [Methanothermus fervidus
DSM 2088]
gi|311224570|gb|ADP77426.1| NADH-ubiquinone oxidoreductase chain 49kDa [Methanothermus fervidus
DSM 2088]
Length = 536
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 31 SLDVDCGDLVSLCSF-LRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRV 89
+++V ++ ++ LR + ++I + + ++Y F K N + +
Sbjct: 4 TVEVHPSEIKNMAEKTLR-----KYPHLITITPIHL---DEELKIIYTFDDLKGNLKHVI 55
Query: 90 KIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH---PLRK 146
+ SI + P A +E E D++GI F+ +++ + + PL K
Sbjct: 56 TYIPVNSPKIDSITDVTPAALVYEMETKDLFGIKFQNSYTSSKLILPDCYSDNLPAPLLK 115
Query: 147 DFPVTGFVE 155
+ E
Sbjct: 116 TTKLKSLRE 124
>gi|212704382|ref|ZP_03312510.1| hypothetical protein DESPIG_02437 [Desulfovibrio piger ATCC 29098]
gi|212672103|gb|EEB32586.1| hypothetical protein DESPIG_02437 [Desulfovibrio piger ATCC 29098]
Length = 520
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 76 YHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
++ + L + + S+ P FEREV++ +GI EGHP L+ +
Sbjct: 65 CCVMAHDQQQELWASRCLPLER-YASMSQECPQLQRFEREVYEAWGIVPEGHPWLKPV 121
>gi|299132788|ref|ZP_07025983.1| NADH dehydrogenase (quinone) [Afipia sp. 1NLS2]
gi|298592925|gb|EFI53125.1| NADH dehydrogenase (quinone) [Afipia sp. 1NLS2]
Length = 513
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
V R+ V PS+ ++P A ER V D++ + G
Sbjct: 54 WGESQAVHMAVADASDPNRILVLSLTCPEGRYPSVGRVHPPAIHLERAVADLFALVPVGL 113
Query: 128 PDLRRILTDYGFEGH-PL 144
PD R L + H PL
Sbjct: 114 PDTRPWLDHGKWGVHAPL 131
>gi|164512980|emb|CAP11583.1| NADH dehydrogenase subunit J [Isoetes echinospora]
Length = 111
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDL 130
E +PS+ I AD+ ERE +DM GI E HP L
Sbjct: 75 REDPRIPSVFWIRKSADFQERESYDMLGIIHESHPRL 111
>gi|74024976|ref|XP_829054.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70834440|gb|EAN79942.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 553
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 47/156 (30%), Gaps = 16/156 (10%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+L D + + L++ F L + ++ R
Sbjct: 211 TLHASEEDYLKMEEELQEHDLYHFRIGELAFPEQRL--RRNYYAMWLLAMYLNKAR-WTM 267
Query: 91 IAVAEGKSVPSIVGIYPGADWFER-----EVWDM-YGIFFEGHPDLRRILTDYGFEGHPL 144
+ V + V + W E E M G F + HP LR H +
Sbjct: 268 LDVHSQRGVKTTGAGMKLLFWKESVSQIMEKRSMPAGQFTDSHPVLRPFAAVVEQNPH-M 326
Query: 145 RKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
K F V GF E +V+ +P + Q +D
Sbjct: 327 TKAF-VRGFSEARL-----RVIQQPGNVKQLFDHFD 356
>gi|156547383|ref|XP_001603855.1| PREDICTED: similar to mCG141618 [Nasonia vitripennis]
Length = 4040
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 8/103 (7%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNI----- 57
+ +L + VR + ++ +++DV D++++ + F +
Sbjct: 1235 ENLNELAAMVRGELPKLVRDVIINL--ITVDVHARDIITVLVENKISSSASFDWMKALRY 1292
Query: 58 -IDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
D + L+R + + Y + RRL + +
Sbjct: 1293 YWDESVDNCLARMSNAEYTYGYEYLGAQRRLVITPLTDKCYLC 1335
>gi|225164840|ref|ZP_03727064.1| NADH-ubiquinone oxidoreductase chain 49kDa [Opitutaceae bacterium
TAV2]
gi|224800550|gb|EEG18922.1| NADH-ubiquinone oxidoreductase chain 49kDa [Opitutaceae bacterium
TAV2]
Length = 511
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 42 LCSFLRD--DPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSV 99
+ FLR D + L GV + F S R + +A G +
Sbjct: 26 VSDFLRHTSDELARGARLCALFGVPSEGGKTHLVALIAFDSDNMLAVARSES-LAAGTAY 84
Query: 100 PSIVGIYPGADWFEREVWDMYGIFFEGHPDL---RRILTD 136
P++ +P A FERE+W+ +G+ +GHP L RR +D
Sbjct: 85 PALTPAHPQAHLFEREIWEQHGLVPQGHPWLKPVRRATSD 124
>gi|210631898|ref|ZP_03297110.1| hypothetical protein COLSTE_01000 [Collinsella stercoris DSM 13279]
gi|210159823|gb|EEA90794.1| hypothetical protein COLSTE_01000 [Collinsella stercoris DSM 13279]
Length = 260
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 14/112 (12%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+DV +L++ L+ FV + + + + + +
Sbjct: 6 FVDVPLEELLTRVQTLK-HEGMRFVQMCAETTEQGID-----LLYTFYDETREHALNLCV 59
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
+ VPSI G+Y A +E E D+YG+ F F GH
Sbjct: 60 YGIDAESRVPSIQGLYFAAFSYENETHDLYGVRFIN--------MKLDFGGH 103
>gi|78221592|ref|YP_383339.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Geobacter
metallireducens GS-15]
gi|78192847|gb|ABB30614.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Geobacter
metallireducens GS-15]
Length = 502
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 39/115 (33%), Gaps = 5/115 (4%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+ V L+ L FL+D + L N L +
Sbjct: 16 VPVASVPLLPLEQFLQDIIDATDRGWRVASCFGVPT---DAGATLWCLMAAPNDGLLGLM 72
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
G + PSI + P FERE+ + GI E HP + + + F P RK
Sbjct: 73 RTEAGMAFPSICRLVPQLHLFEREIAEQCGITPEAHPWPKPVRFHHPF--MPSRK 125
>gi|260462449|ref|ZP_05810656.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Mesorhizobium
opportunistum WSM2075]
gi|259031645|gb|EEW32914.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Mesorhizobium
opportunistum WSM2075]
Length = 505
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
V + + V PS+ ++P A ER D++G+ +G
Sbjct: 48 WGEPGAVHMALHD-ENAGDIGVVSLECPNGRYPSVGRLHPPALRLERAAADLFGLLPQGA 106
Query: 128 PDLRRILTD-YGFEGHPL 144
PD RR L Y HPL
Sbjct: 107 PDTRRWLDHGYWGVSHPL 124
>gi|330008043|ref|ZP_08306142.1| hypothetical protein HMPREF9538_03835 [Klebsiella sp. MS 92-3]
gi|328535247|gb|EGF61740.1| hypothetical protein HMPREF9538_03835 [Klebsiella sp. MS 92-3]
Length = 106
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 11/101 (10%)
Query: 1 MVRKIEDLGDY----IVNSFSGSVRFAVNS-VGELSLDVDCGDLVSLCSFLRDDPHCCFV 55
M E +G + + +F G V +L++ V L + FL
Sbjct: 1 MSE--EKIGQHYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---G 55
Query: 56 NIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG 96
+ L G D + + V Y S + + + + V
Sbjct: 56 WLSVLFGNDERKLNGHYAVYYVL-SMEQGTKCWITVRVEVD 95
>gi|254459092|ref|ZP_05072515.1| hypothetical protein CBGD1_1732 [Campylobacterales bacterium GD 1]
gi|207084363|gb|EDZ61652.1| hypothetical protein CBGD1_1732 [Campylobacterales bacterium GD 1]
Length = 115
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 8/117 (6%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
+ ++V ++ + F+ + + D N+ ++ + F + +
Sbjct: 1 MIKIEVSLENVRDKIKEFYKEKEWHFLTLNGVALED-----NKVEIQWIFSKYEAMDEVV 55
Query: 89 VKI-AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPL 144
V + + VPSIV I P A +RE+ DM+G+ EG + + D E PL
Sbjct: 56 VFYAKIKYSEIVPSIVDIIPSAIISQREIVDMFGVEVEGSE--KGLYLDEDSELRPL 110
>gi|154244128|ref|YP_001415086.1| NADH-ubiquinone oxidoreductase chain 49kDa [Xanthobacter
autotrophicus Py2]
gi|154158213|gb|ABS65429.1| NADH-ubiquinone oxidoreductase chain 49kDa [Xanthobacter
autotrophicus Py2]
Length = 501
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 12/107 (11%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+V +L L D V L + + RL V
Sbjct: 23 EVSAEQWTALAGHLAAGELVLMGLWGDAGAVHM------------ALLDEASGRLAVATF 70
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
G + PS+ +P A ER V D+YG+ EG PD R L +
Sbjct: 71 ACVGGTFPSVARHHPPAARLERTVRDLYGLVPEGAPDERPWLDHGRW 117
>gi|282163149|ref|YP_003355534.1| Ech hydrogenase subunit D [Methanocella paludicola SANAE]
gi|282155463|dbj|BAI60551.1| Ech hydrogenase subunit D [Methanocella paludicola SANAE]
Length = 111
Score = 38.4 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 8/114 (7%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
V +L + + L+ +I + G D + + N R+ V
Sbjct: 5 TVTQAELQGIVNGLKAKDA----RLITIVGADTGENIEVIYFFHTGIGQTENYRIIVP-K 59
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRK 146
+ + SI I P A E E+ +M+G+ +G P R PLR+
Sbjct: 60 AGGNEEIESITPIIPAAYIAENELCEMFGVRVKGVPG--RFFLHPSVNA-PLRR 110
>gi|313683182|ref|YP_004060920.1| NADH dehydrogenase (ubiquinone) 30 kda subunit [Sulfuricurvum
kujiense DSM 16994]
gi|313156042|gb|ADR34720.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Sulfuricurvum
kujiense DSM 16994]
Length = 114
Score = 38.4 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Query: 55 VNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWF-E 113
L + ++ + F + + A+++ ++ + + + E
Sbjct: 22 REWHFLSVNGIDLGEGKIELQWIFSKYGVKDEIVIYFALSDYETPVPSIASLIPSSFMGE 81
Query: 114 REVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
RE+ DM+G+ EG + + D HPLR
Sbjct: 82 REIVDMFGLSVEG--TEKGLYLDEDSLPHPLR 111
>gi|147919862|ref|YP_686387.1| ech hydrogenase, subunit D [uncultured methanogenic archaeon RC-I]
gi|110621783|emb|CAJ37061.1| Ech hydrogenase, subunit D [uncultured methanogenic archaeon RC-I]
Length = 113
Score = 38.4 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 9/121 (7%)
Query: 29 ELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLR 88
E+++ V +L ++ +++ +I + G D + + R+
Sbjct: 2 EVTI-VTQQELQAVAKRMKESGA----RLITIVGTDAGANIEVTYFFHTGTGKTEQYRVV 56
Query: 89 VKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDF 148
V + + I I+P A E EV +M+G+ +G P R PLR+
Sbjct: 57 VP-KTGGNEEIEGISHIWPAAYVAENEVSEMFGVKVKGVPG--RFFLHESITA-PLRRKT 112
Query: 149 P 149
P
Sbjct: 113 P 113
>gi|221482414|gb|EEE20762.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 859
Score = 38.4 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 100 PSIVGIYPGADWFEREVWDMY------GIFFEGHPDL-----RRILTDYGFEGHPLRKDF 148
S+ D+ ERE D++ G+ F+G PDL RR L +R+ +
Sbjct: 465 KSVHSALRIQDFVEREGEDLFSSRGNRGVAFDGTPDLASSVRRRALPPLPLHAKNMRR-Y 523
Query: 149 P---VTGFVELHYDDK 161
P ++ EL D +
Sbjct: 524 PTTSLSAREELRADSE 539
>gi|237841349|ref|XP_002369972.1| hypothetical protein TGME49_021430 [Toxoplasma gondii ME49]
gi|211967636|gb|EEB02832.1| hypothetical protein TGME49_021430 [Toxoplasma gondii ME49]
Length = 557
Score = 38.4 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 100 PSIVGIYPGADWFEREVWDMY------GIFFEGHPDL-----RRILTDYGFEGHPLRKDF 148
S+ D+ ERE D++ GI F+G PDL RR L +R+ +
Sbjct: 163 KSVHSALRIQDFVEREGEDLFSSRGNRGIAFDGTPDLASSVRRRALPPLPLHAKNMRR-Y 221
Query: 149 P---VTGFVELHYDDK 161
P ++ EL D +
Sbjct: 222 PTTSLSAREELRADSE 237
>gi|221198811|ref|ZP_03571856.1| putative hydrogenase-4, G subunit [Burkholderia multivorans CGD2M]
gi|221205072|ref|ZP_03578088.1| putative hydrogenase-4, G subunit [Burkholderia multivorans CGD2]
gi|221174863|gb|EEE07294.1| putative hydrogenase-4, G subunit [Burkholderia multivorans CGD2]
gi|221181262|gb|EEE13664.1| putative hydrogenase-4, G subunit [Burkholderia multivorans CGD2M]
Length = 496
Score = 38.4 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 32 LDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKI 91
+DVD + L R + ++ + G + R + Y RL
Sbjct: 2 VDVDEPRWLDLAHAARMERS----RLVAMWGGETPERVFSVNAAYECDDGVLWVRLATGQ 57
Query: 92 AVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEG--HPLRK 146
+ P + G++P A +R ++D+ G+ D R L + G PL+K
Sbjct: 58 ELRVDGDYPDLAGVFPAATRMQRAIFDLTGLRAREARDTRPWLNHGNWPGDYFPLQK 114
>gi|167589518|ref|ZP_02381906.1| putative formate hydrogenlyase subunit [Burkholderia ubonensis Bu]
Length = 519
Score = 38.0 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVK 90
+D D + + R + + ++ + G + + + + Y R+ +
Sbjct: 24 VVDADAAGWLEIARTARAERN----RLVAMWGGEGVEGAFAVNAAYECDDGILWTRIAIG 79
Query: 91 IAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRK 146
G P +V ++P A +R ++D+ G+ G D R L + PL++
Sbjct: 80 RKPDAGGDYPDLVPVFPCAARMQRAIFDLTGLRARGAGDTRPWLNHGNWPDDYFPLQR 137
>gi|153006623|ref|YP_001380948.1| NADH-ubiquinone oxidoreductase chain 49kDa [Anaeromyxobacter sp.
Fw109-5]
gi|152030196|gb|ABS27964.1| NADH-ubiquinone oxidoreductase chain 49kDa [Anaeromyxobacter sp.
Fw109-5]
Length = 515
Score = 38.0 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 96 GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLR 145
+ PS+ P A FERE+ + YG+ EGHP L+ + + PLR
Sbjct: 85 DGAYPSLSAEAPAAQAFERELAEQYGVRPEGHPWLKPLRFEP-----PLR 129
>gi|242061184|ref|XP_002451881.1| hypothetical protein SORBIDRAFT_04g009180 [Sorghum bicolor]
gi|241931712|gb|EES04857.1| hypothetical protein SORBIDRAFT_04g009180 [Sorghum bicolor]
Length = 344
Score = 38.0 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 11/76 (14%)
Query: 127 HPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEHRDYDF--LSP 184
HP + GF HP EL Y KKV Y P++L R+ D L P
Sbjct: 2 HPSCSPLAVPPGFRFHP--------TDEELLYYYLRKKVAYEPIDLDV-IREVDLNKLEP 52
Query: 185 WEGVNSLFAKEDSKDD 200
W+ + +S+D+
Sbjct: 53 WDLKDRCRIGTESQDE 68
>gi|302670766|ref|YP_003830726.1| ech hydrogenase subunit D EchD [Butyrivibrio proteoclasticus B316]
gi|302395239|gb|ADL34144.1| ech hydrogenase subunit D EchD [Butyrivibrio proteoclasticus B316]
Length = 110
Score = 38.0 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+V ++ L+ +++ C V + + +KI
Sbjct: 7 NVAPESILDEVQKLK----FQGYHLMQQCATRIPD--GYELVYTFGKDYEVKQ---LKIT 57
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
++E + + SI +P A E E+ D++G+ +
Sbjct: 58 LSEDQEISSISSAFPCAFIHENEMHDLFGVNIK 90
>gi|189425611|ref|YP_001952788.1| NADH-ubiquinone oxidoreductase chain 49kDa [Geobacter lovleyi SZ]
gi|189421870|gb|ACD96268.1| NADH-ubiquinone oxidoreductase chain 49kDa [Geobacter lovleyi SZ]
Length = 506
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Query: 44 SFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIV 103
FL+ F + + SP L + + G PSI
Sbjct: 26 RFLQTILEMTGRGWRVSSYCGFPADG-AITLYCLLASPADGV-LGIMQTICNGTEFPSIA 83
Query: 104 GIYPGADWFEREVWDMYGIFFEGHPDLRRI 133
P FERE+ + GI F GHP + +
Sbjct: 84 VQCPQLQLFEREIAEQCGIRFVGHPWFKPV 113
>gi|320355286|ref|YP_004196625.1| hydrogenase, component E-formate hydrogenlyase subunit 5
[Desulfobulbus propionicus DSM 2032]
gi|320123788|gb|ADW19334.1| hydrogenase, component E-formate hydrogenlyase subunit 5
[Desulfobulbus propionicus DSM 2032]
Length = 503
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 38/126 (30%), Gaps = 20/126 (15%)
Query: 25 NSVGELSLDVDCGDL--VSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSP- 81
GEL ++ + V FLR N + + + S
Sbjct: 7 IDNGEL---IERQRIPRVDFSHFLRLLTDFVHANGYVVQLFAYPEEGQTRLLAVVRNSNL 63
Query: 82 ----KYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDY 137
R + +A G FERE+ + YG+ GHP L+ +
Sbjct: 64 FVLETTVDREFPSLTLAGGAKFSM----------FEREIAEQYGLMPLGHPWLKMVRYHP 113
Query: 138 GFEGHP 143
+ G P
Sbjct: 114 NYTGQP 119
>gi|320587668|gb|EFX00143.1| exocyst complex component [Grosmannia clavigera kw1407]
Length = 778
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 20/161 (12%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ I D+ D + S + AVN+ EL V L+ +++
Sbjct: 123 QNIADVSDALNESL--KILHAVNNAHEL---VRKKKYYGA---LKSLEDLQNEHLV---- 170
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
N++ + ++ I ++ +++ + RE G
Sbjct: 171 ---PIIQNKYATQHQLADL-----IQKSIPASQKTISEAVMNDLNTWLFRVRETSQFLGE 222
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVK 163
H D RR E + K F + +EL +D+ +
Sbjct: 223 VAFYHTDTRRTRMRERVEQNEFLKHFRLNSAIELVFDESEE 263
>gi|320101918|ref|YP_004177509.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Isosphaera pallida
ATCC 43644]
gi|319749200|gb|ADV60960.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Isosphaera pallida
ATCC 43644]
Length = 508
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE-GH 142
PS+ P A WFERE+ + + + GHP L+ I + GH
Sbjct: 82 FPSLTPDAPQAHWFEREIAEQWAVVPVGHPWLKPIRFHPSYRDGH 126
>gi|91779763|ref|YP_554971.1| putative formate hydrogenlyase subunit [Burkholderia xenovorans
LB400]
gi|91692423|gb|ABE35621.1| putative formate hydrogenlyase subunit [Burkholderia xenovorans
LB400]
Length = 515
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 11/115 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
VD + R++ +I L G + + F + + L +A
Sbjct: 28 VDPDTWMRTARTARENGG----RLISLWGNE--EATGTFAISAAYALEDGILWLEAPVAA 81
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRK 146
P + ++P A +R V+D+ G+ G D R L + HPL+K
Sbjct: 82 QG---YPDLSTVFPCAARMQRAVFDLLGLRAIGAADSRPWLNHGNWPRDYHPLQK 133
>gi|213586244|ref|ZP_03368070.1| formate hydrogenlyase subunit 5 precursor [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 99
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 3 RKI-EDLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
K+ + + +F G V A + +L++ V L + FL + L
Sbjct: 4 EKLGQQYLAALHQAFPGVVMDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---GWLSVL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG 96
G D + V Y S + + + + V
Sbjct: 61 FGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVD 95
>gi|213417631|ref|ZP_03350765.1| formate hydrogenlyase subunit 5 precursor [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
Length = 98
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 3 RKI-EDLGDYIVNSFSGSV-RFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
K+ + + +F G V A + +L++ V L + FL + L
Sbjct: 4 EKLGQQYLAALHQAFPGVVMDEAWQTKDQLTITVKVNYLPEVVEFLYYQQG---GWLSVL 60
Query: 61 CGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG 96
G D + V Y S + + + + V
Sbjct: 61 FGNDERQLCGHYAVYYVL-SMEQGTKCWITVRVEVD 95
>gi|164452406|gb|ABY57044.1| NADH dehydrogenase subunit J [Asplenium ceterach]
Length = 102
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V Y P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEV 69
Query: 88 RVKIAV-AEGKSVPSIVGIYPGADWFEREVWDM 119
KI V + +PS+ ++ +D ERE +DM
Sbjct: 70 CTKIFVSRKDPKIPSVYWVWKSSDLQERESYDM 102
>gi|164452416|gb|ABY57049.1| NADH dehydrogenase subunit J [Asplenium aureum]
Length = 102
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V Y P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYYLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAE-GKSVPSIVGIYPGADWFEREVWDM 119
KI V +PS+ ++ +D ERE +DM
Sbjct: 70 CTKIFVPRKDPKIPSVYWVWKSSDLQERESYDM 102
>gi|291562563|emb|CBL41379.1| Protein of unknown function (DUF1703)./Predicted AAA-ATPase
[butyrate-producing bacterium SS3/4]
Length = 530
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 1 MVRKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDL 60
M +E++ + + N + + E+ D +L+ + + C FV +ID
Sbjct: 104 MSETMEEMLEMLKNYL---ILDFKETFHEIQFR-DEKNLIQVMKDVFRYTKCPFVILIDE 159
Query: 61 CGVDFLSRSNR 71
F
Sbjct: 160 WDCLFREYKQN 170
>gi|296161107|ref|ZP_06843917.1| putative formate hydrogenlyase subunit [Burkholderia sp. Ch1-1]
gi|295888630|gb|EFG68438.1| putative formate hydrogenlyase subunit [Burkholderia sp. Ch1-1]
Length = 515
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 11/115 (9%)
Query: 34 VDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAV 93
VD + R++ +I L G + + F + + L +A
Sbjct: 28 VDPDTWMRTARTARENGG----RLISLWGNE--EATGTFAISAAYALEDGILWLESPVAG 81
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRK 146
P + ++P A +R V+D+ G+ G D R L + HPL+K
Sbjct: 82 EG---YPDLSAVFPCAARMQRAVFDLLGLRAIGAADSRPWLNHGNWPRDYHPLQK 133
>gi|27381454|ref|NP_772983.1| hydrogenlyase component [Bradyrhizobium japonicum USDA 110]
gi|27354622|dbj|BAC51608.1| blr6343 [Bradyrhizobium japonicum USDA 110]
Length = 503
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 66 LSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFE 125
L + + ++ PS+ +P A ER + D++G+ E
Sbjct: 47 LWGEPSTVHMAIMDGHTAE--VATVSLDCPDRTYPSVGKHHPPALRLERAINDLFGLSAE 104
Query: 126 GHPDLRRILTDYGFEG-HPL 144
G PD R + PL
Sbjct: 105 GLPDTRPWFDHDCWAVRFPL 124
>gi|261335000|emb|CBH17994.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 553
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 16/150 (10%)
Query: 37 GDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEG 96
D + + L++ F L + ++ R + V
Sbjct: 217 EDYLKMEEELQEHDLYHFRIGELAFPEQRL--RRNYYAMWLLAMYLNKAR-WTMLDVHSQ 273
Query: 97 KSVPSIVGIYPGADWFER-----EVWDM-YGIFFEGHPDLRRILTDYGFEGHPLRKDFPV 150
+ V + W E E M G F + HP LR H + K F V
Sbjct: 274 RGVKTTGAGMKLLFWKESVSQIMEKRSMPAGQFTDSHPVLRPFAAVVEQNPH-MTKAF-V 331
Query: 151 TGFVELHYDDKVKKVVYRPVELMQEHRDYD 180
GF E +V+ +P + Q +D
Sbjct: 332 RGFSEARL-----RVIQQPGNVKQLFDHFD 356
>gi|164452438|gb|ABY57060.1| NADH dehydrogenase subunit J [Asplenium adiantum-nigrum]
Length = 104
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 31 SLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFL---SPKYNRRL 87
+L V D +S+ F + C D + V + P + +
Sbjct: 13 TLQVKAEDWLSVAVA---PYAYGFNYLRSQCAYDSAPGGSLVSVYHLTQVRDQPDQSEEV 69
Query: 88 RVKIAVAEGKS-VPSIVGIYPGADWFEREVWDMY 120
KI V + +PS+ ++ +D ERE +DM
Sbjct: 70 CTKIFVPRKEPKIPSVYWVWKSSDLQERESYDML 103
>gi|312113081|ref|YP_004010677.1| NADH-ubiquinone oxidoreductase chain 49kDa [Rhodomicrobium
vannielii ATCC 17100]
gi|311218210|gb|ADP69578.1| NADH-ubiquinone oxidoreductase chain 49kDa [Rhodomicrobium
vannielii ATCC 17100]
Length = 504
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 68 RSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGH 127
+ V + N R V +++ G + PS+ +P A ER + D+YG +G
Sbjct: 59 WVDDHHVRMALWDAQENCRAIVSLSLKAG-AYPSVGLHHPPALRLERAMRDLYGAIPDGI 117
Query: 128 PDLRRILTDYGFEG 141
PD RR L + G
Sbjct: 118 PDERRWLDHGVWPG 131
>gi|326402828|ref|YP_004282909.1| putative NADH-ubiquinone oxidoreductase [Acidiphilium multivorum
AIU301]
gi|325049689|dbj|BAJ80027.1| putative NADH-ubiquinone oxidoreductase [Acidiphilium multivorum
AIU301]
Length = 478
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
V G +VPSI I+P W+ERE D GI F G P+ ++ PLR D
Sbjct: 60 VPAGGTVPSIATIWPLLGWYERETADHRGIAFSGQPEPFSLIA-------PLRAD 107
>gi|148259620|ref|YP_001233747.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Acidiphilium cryptum
JF-5]
gi|146401301|gb|ABQ29828.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Acidiphilium cryptum
JF-5]
Length = 476
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKD 147
V G +VPSI I+P W+ERE D GI F G P+ ++ PLR D
Sbjct: 58 VPAGGTVPSIATIWPLLGWYERETADHRGIAFSGQPEPFSLIA-------PLRAD 105
>gi|222082001|ref|YP_002541366.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
gi|221726680|gb|ACM29769.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
Length = 306
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 120 YGIFFEGH--PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+GI G+ PDL +RKD P+ F E+H++
Sbjct: 147 FGINLMGNSDPDLSFEPLIDDPFVLAMRKDHPLAAFDEIHWNQLE 191
>gi|288940085|ref|YP_003442325.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Allochromatium
vinosum DSM 180]
gi|288895457|gb|ADC61293.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Allochromatium
vinosum DSM 180]
Length = 134
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Query: 27 VGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR 86
EL+ V F ++ + G +R++ F+++ +
Sbjct: 7 FNELT----PDQWVPTAEQ---HQRDGFR-LVQMTGT---ARADHFEILISYEQDYRCTH 55
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
RV++ +PS+ I+P A +E E+ D++G+ F G
Sbjct: 56 YRVQLPRDPLPELPSLSAIFPAAFTYENELKDLFGLSFPG 95
>gi|303327573|ref|ZP_07358014.1| putative Ech hydrogenase, subunit EchD [Desulfovibrio sp. 3_1_syn3]
gi|302862513|gb|EFL85446.1| putative Ech hydrogenase, subunit EchD [Desulfovibrio sp. 3_1_syn3]
Length = 162
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 74 VVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHP 128
+ + S R +++ V + + +PSI +Y A E E D +G+ FEG P
Sbjct: 61 LCHWSPSDAKGMR-HLRMDVDKDQLIPSISSVYFCAVLIENETQDQFGVRFEGLP 114
>gi|150401364|ref|YP_001325130.1| hydrogenase, component E-formate hydrogenlyase subunit 5-like
protein [Methanococcus aeolicus Nankai-3]
gi|150014067|gb|ABR56518.1| hydrogenase, component E-formate hydrogenlyase subunit 5-like
protein [Methanococcus aeolicus Nankai-3]
Length = 518
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEGHP 143
FERE+ + YGI + HP L+ + ++G P
Sbjct: 95 FEREIAEQYGIVPKNHPWLKSVRYHKNYKGAP 126
>gi|15890718|ref|NP_356390.1| LysR family transcriptional regulator [Agrobacterium tumefaciens
str. C58]
gi|15158991|gb|AAK89175.1| transcriptional regulator, LysR family [Agrobacterium tumefaciens
str. C58]
Length = 298
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 120 YGIFFEGH--PDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKV 162
+GI G+ PDL +RKD P+ F + +D
Sbjct: 146 FGINLMGNSDPDLAFEPLIDDPFVLAMRKDHPLAAFETIQWDQLE 190
>gi|322420680|ref|YP_004199903.1| NADH-ubiquinone oxidoreductase chain 49kDa [Geobacter sp. M18]
gi|320127067|gb|ADW14627.1| NADH-ubiquinone oxidoreductase chain 49kDa [Geobacter sp. M18]
Length = 503
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 59 DLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWD 118
F + +Y LS K + + V + GKS S+V P FERE+ +
Sbjct: 39 WRVVSYFGMQEEDGVRLYCLLSFKSHATIGVMSTLITGKSFYSLVSEAPQLHLFEREIAE 98
Query: 119 MYGIFFEGHPDLRRI 133
+ + EGHP + +
Sbjct: 99 QFYLNLEGHPWPKPV 113
>gi|258646993|ref|ZP_05734462.1| Ech Hydrogenase, Subunit [Dialister invisus DSM 15470]
gi|260404434|gb|EEW97981.1| Ech Hydrogenase, Subunit [Dialister invisus DSM 15470]
Length = 151
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 17/116 (14%)
Query: 28 GELSLDVDCGDLVS-LCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRR 86
+ +++ D++ + F R+ V L + K
Sbjct: 2 NQQMIEIKSADILKQVSRFKREHARL----------VQILCTRVEEGYELTYTFDKDYFM 51
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGH 142
++ V +SV SI G Y A +E E+ D++G+ + I D + GH
Sbjct: 52 YHLRCLVPVYRSVMSITGQYWYAFVWENEIHDLFGLKID------FIERDVDYGGH 101
>gi|156064349|ref|XP_001598096.1| hypothetical protein SS1G_00182 [Sclerotinia sclerotiorum 1980]
gi|154691044|gb|EDN90782.1| hypothetical protein SS1G_00182 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 703
Score = 35.7 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 20/174 (11%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ I + + + S V AVN +L + + L ++I
Sbjct: 124 QNIAEASEALKESL--KVLHAVNQAHDL---IRKKKYYAALKAL---DDLQNEHLI---- 171
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ N++ + ++ I ++ +++ + RE G
Sbjct: 172 ---PTIQNKYATQHTLAEI-----IQKSIPSSQKAISEAVMSDLNTWLYRIRETSQFLGE 223
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
H ++RR E +P ++F + +EL YD+ + V EL +
Sbjct: 224 VAFYHTNIRRSRQKERMEANPYLRNFKLNSAIELVYDESEEFDVLNNEELQVDF 277
>gi|154312150|ref|XP_001555403.1| hypothetical protein BC1G_06108 [Botryotinia fuckeliana B05.10]
gi|150850071|gb|EDN25264.1| hypothetical protein BC1G_06108 [Botryotinia fuckeliana B05.10]
Length = 743
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 20/174 (11%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ I + + + S V AVN +L + + L ++I
Sbjct: 124 QNIAEASEALKESL--KVLHAVNQAHDL---IRKKKYYAALKAL---DDLQNEHLI---- 171
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
+ N++ + ++ I ++ +++ + RE G
Sbjct: 172 ---PTIQNKYATQHTLAEI-----IQKSIPSSQKAISEAVMSDLNTWLYRIRETSQFLGE 223
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
H ++RR E +P ++F + +EL YD+ + V EL +
Sbjct: 224 VAFYHTNIRRSRQKERMEANPYLRNFKLNSAIELVYDESEEFDVLNNEELQVDF 277
>gi|116208150|ref|XP_001229884.1| hypothetical protein CHGG_03368 [Chaetomium globosum CBS 148.51]
gi|88183965|gb|EAQ91433.1| hypothetical protein CHGG_03368 [Chaetomium globosum CBS 148.51]
Length = 743
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 20/174 (11%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCG 62
+ I D+ D + S + AVN+ +L + + L+ ++
Sbjct: 123 QNITDVSDALEESL--KILHAVNNAHDL---IRKKKYYAA---LKSLEDLQNEYLV---- 170
Query: 63 VDFLSRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGI 122
N+F Y ++ I ++ +++ + RE G
Sbjct: 171 ---PIIQNKFATQYKLADM-----IQKSIPASQKAISEAVMSDLNSWLFIVRESSQFLGE 222
Query: 123 FFEGHPDLRRILTDYGFEGHPLRKDFPVTGFVELHYDDKVKKVVYRPVELMQEH 176
H + RR EG+ L F + +EL +D+ + V EL +
Sbjct: 223 VAFYHTEQRRARQKERMEGNELLSRFKLNSAIELVFDEDDEFDVLSNDELQVDF 276
>gi|152963583|tpg|DAA05981.1| TPA_exp: odorant receptor 23 [Bombyx mori]
Length = 294
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 18/44 (40%)
Query: 3 RKIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFL 46
+ D+ D + + + N +L + + +L+ +FL
Sbjct: 99 ESLLDVVDKLREIYPDEIEETANDNDQLGIVNEANELLKFVNFL 142
>gi|90422452|ref|YP_530822.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Rhodopseudomonas
palustris BisB18]
gi|90104466|gb|ABD86503.1| NADH-ubiquinone oxidoreductase, chain 49kDa [Rhodopseudomonas
palustris BisB18]
Length = 502
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 94 AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139
+ PS+ +P A ER + D++G+ G PD R L +
Sbjct: 73 CPNRCFPSVAAPHPPALRLERSIRDLFGLEPVGSPDSRPWLDHGQW 118
>gi|51244895|ref|YP_064779.1| hydrogenase, component E-formate hydrogenlyase subunit 5
[Desulfotalea psychrophila LSv54]
gi|50875932|emb|CAG35772.1| related to hydrogenase, component E-formate hydrogenlyase subunit 5
[Desulfotalea psychrophila LSv54]
Length = 509
Score = 35.3 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 112 FEREVWDMYGIFFEGHPDLRRILTDYGFEG 141
FERE+ + YGI +GHP L+ + + G
Sbjct: 93 FEREIAEQYGITPDGHPWLKMVRYHKNYAG 122
>gi|256819031|ref|YP_003140310.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
gi|256580614|gb|ACU91749.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
Length = 597
Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCC 53
E +G Y+ V G L+L + + ++++P
Sbjct: 60 EQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKEVKNNPQFG 107
>gi|186470859|ref|YP_001862177.1| NADH-ubiquinone oxidoreductase chain 49kDa [Burkholderia phymatum
STM815]
gi|184197168|gb|ACC75131.1| NADH-ubiquinone oxidoreductase chain 49kDa [Burkholderia phymatum
STM815]
Length = 524
Score = 35.3 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 99 VPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFE--GHPLRK 146
P + I+P A +R V+D+ G+ G D R L + +PL+K
Sbjct: 93 YPDLSTIFPCASRMQRAVYDLLGLRATGAADSRPWLNHGNWPADYYPLQK 142
>gi|315224424|ref|ZP_07866254.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287]
gi|314945627|gb|EFS97646.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287]
Length = 631
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%)
Query: 6 EDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCC 53
E +G Y+ V G L+L + + ++++P
Sbjct: 94 EQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKEVKNNPQFG 141
>gi|88603007|ref|YP_503185.1| ech hydrogenase, subunit EchD [Methanospirillum hungatei JF-1]
gi|88188469|gb|ABD41466.1| ech hydrogenase subunit D [Methanospirillum hungatei JF-1]
Length = 129
Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 87 LRVKIAVAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
+ ++I + K +PSI IY A +E E+ D++GI F G
Sbjct: 55 IHLRIPASTEKPIPSISRIYLAAFVYENEIADLFGIPFSG 94
>gi|88604180|ref|YP_504358.1| putative PAS/PAC sensor protein [Methanospirillum hungatei JF-1]
gi|88189642|gb|ABD42639.1| putative PAS/PAC sensor protein [Methanospirillum hungatei JF-1]
Length = 598
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 33/96 (34%), Gaps = 16/96 (16%)
Query: 8 LGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVN-IIDLCGVDFL 66
L ++++ + L+++ + L ++D+PH F L G +L
Sbjct: 49 LNNHLIELLPKFID----------LNIEPESFLELVERIKDNPHLEFSQKFSCLTGDKWL 98
Query: 67 SRSNRFDVVYHFLSPKYNRRLRVKIAVAEGKSVPSI 102
+ + + R+ + +++ +
Sbjct: 99 ETKSLLG-----KNDEIMGRIWIISDISKNIQTTAT 129
>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
Length = 921
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 12/114 (10%)
Query: 36 CGDLVSLCSFLRDDPHCCFVNIIDLC---GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
DL+ + P + ++ G +SR + V + + +
Sbjct: 419 REDLLKAVEKTKWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYAENDEPIITDET 478
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMY--GIFFEGHPDLRRI----LTDYGFE 140
+ V ++ + WFERE D+ G EG P+ R + D F+
Sbjct: 479 IEH---VSNLFREHGSNVWFEREAKDLLPEGFTHEGSPNGRFTKETDIMDVWFD 529
>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 921
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 36 CGDLVSLCSFLRDDPHCCFVNIIDLC---GVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
DL+ + P + ++ G +SR + V + +
Sbjct: 419 REDLLKAVEKTKWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYAENEEPIITDET 478
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMY--GIFFEGHPDLRRI----LTDYGFE 140
+ V ++ + WFERE D+ G EG P+ R + D F+
Sbjct: 479 IEH---VSNLFREHGSNVWFEREAKDLLPEGFTHEGSPNGRFTKETDIMDVWFD 529
>gi|303241789|ref|ZP_07328285.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Acetivibrio
cellulolyticus CD2]
gi|302590670|gb|EFL60422.1| NADH dehydrogenase (ubiquinone) 30 kDa subunit [Acetivibrio
cellulolyticus CD2]
Length = 114
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 9/94 (9%)
Query: 33 DVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNRFDVVYHFLSPKYNRRLRVKIA 92
+V LVS + ++ + ++ ++ K + +K+
Sbjct: 9 EVTVDKLVSTVK----NFSTQGYRLVQISCTKL-----NENLEINYSFDKDYEFVYLKLN 59
Query: 93 VAEGKSVPSIVGIYPGADWFEREVWDMYGIFFEG 126
V +PS+ +Y A +E E+ D++G+ G
Sbjct: 60 VPMNAELPSVSEVYWSAMLYENEIHDLFGLKING 93
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.141 0.457
Lambda K H
0.267 0.0436 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,034,087,530
Number of Sequences: 14124377
Number of extensions: 103608161
Number of successful extensions: 349429
Number of sequences better than 10.0: 2921
Number of HSP's better than 10.0 without gapping: 2839
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 344884
Number of HSP's gapped (non-prelim): 3158
length of query: 202
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 70
effective length of database: 2,978,375,866
effective search space: 208486310620
effective search space used: 208486310620
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 78 (34.6 bits)