HHsearch alignment of GI: 254780855 and MMDB domain: 1cc1_L_93-241_281-405
>1cc1_L (L:93-241,L:281-405) Hydrogenase (large subunit); NI-Fe-Se hydrogenase, oxidoreductase; 2.15A {Desulfovibrio baculatus}
Probab=99.90 E-value=1.3e-22 Score=176.34 Aligned_cols=176 Identities=13% Similarity=-0.001 Sum_probs=131.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------------------------------HHHHHHHHHH
Q ss_conf 78889999999999999998899987433430564-----------------------------------1899999999
Q gi|254780855|r 92 IPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGAL-----------------------------------TPPLWGFEER 136 (396)
Q Consensus 92 vp~~a~llR~Ll~~~e~i~sH~~h~~~l~~~~~~~-----------------------------------~~~~~~~~~r 136 (396)
||++|++||||++.+++||||++|||+|+.||+.. ..+++++++|
T Consensus 1 VP~~a~~lRnL~~~~e~iqsH~lHfY~L~~PDfv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~al~~r 80 (274)
T 1cc1_L 1 VTTNGRITRNLIFGANYLQSHILHFYHLAALDYVKGPDVSPFVPRYANADLLTDRIKDGAKADATNTYGLNQYLKALEIR 80 (274)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGTSCCCSSTTSCSCCTTCCCHHHHCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89789999999999999999898998851134315644341000000035555665411221133345578999999999
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHCCEEEECCCCCCCC
Q ss_conf 9999789975597647633653620007898999999999999999999999-998448333442122112303333102
Q gi|254780855|r 137 EKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGCWCDSFPSALNDIS-DLLTGNRIFKQRNVNIGTVKLEDAWGW 215 (396)
Q Consensus 137 ~~~~~~~~~~gG~~~Hp~~~vpGGv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 215 (396)
+.++++++++|||+|||++++|||+++.++.+++.++...+++..++++... ..+.......................+
T Consensus 81 k~~~~i~al~GGk~pHp~~~vPGGvt~~~t~~~l~~l~~~l~~~~~f~e~~~l~~~~~~~~~~~~~~~~~~i~E~v~~sw 160 (274)
T 1cc1_L 81 RICHEMVAMFGGRMPHVQGMVVGGATEIPTADKVAEYAARFKEVQKFVIEEYLPLIYTLGSVYTDLFETKLVKEYVGHSF 160 (274)
T ss_dssp HHHHHHHHHHHSSSSSCSSEETTEESSCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGGSSGGEEEECTTBT
T ss_pred HHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCEE
T ss_conf 99999999974998665755446616779999999999999999999998668999999987555543277303467235
Q ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 35665101367601021017544334677540010123201221100011687589999999621
Q gi|254780855|r 216 GFSGVMIRGSGAAWDLRKSQPYECYSELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRL 280 (396)
Q Consensus 216 ~~~G~~~~~~g~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 280 (396)
|......+..+++....+.+....+++|.+.+.+.+.+.|.++++|+.+.+.
T Consensus 161 -------------y~~~~~~~lhP~~g~T~P~~~~~~kYSW~kaPr~~g~~~EvGplAr~~v~~~ 212 (274)
T 1cc1_L 161 -------------FDHSAPGGLHYSVGETNPNPDKPGAYSFVKAPRYKDKPCEVGPLARMWVQNP 212 (274)
T ss_dssp -------------BCCSSSSCEEGGGCCCCBCTTCTTCCBSCCEEEETTBCCBCSHHHHHHHHCC
T ss_pred -------------EECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEECCCCHHHCHHHHHHHHHH
T ss_conf -------------4045666557434500124565542110115000585110158899986411