HHsearch alignment of GI: 254780855 and MMDB domain: 1yq9_H_1-55_493-536

>1yq9_H (H:1-55,H:493-536) Periplasmic [NIFE] hydrogenase large subunit; oxidoreductase; 2.35A {Desulfovibrio gigas}

Probab=99.08  E-value=2.3e-10  Score=90.90  Aligned_cols=58  Identities=22%  Similarity=0.315  Sum_probs=47.7

Q ss_pred             CCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEEEEEECCCHHHHHHHHCCCCHH-HHH
Q ss_conf             97445615998406868666775599999839989999988041157889874098987-855
Q gi|254780855|r    1 MDKKKSRSFTINFGPQHPAAHGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFL-QAV   62 (396)
Q Consensus         1 ~~~~~~~~~~~~~gp~~~~~~g~l~~~~~v~~~~V~~a~~~~g~~~RGfE~il~Gr~~~-da~   62 (396)
                      |....++  +|.+-|++ +++||+++++++||++|++|+++ +++|||||+||+||||+ |..
T Consensus         1 Ms~~~~~--~I~IdPiT-RIEGh~~i~v~ve~g~V~da~~~-~~~~RGFE~iL~GR~p~rd~~   59 (99)
T 1yq9_H            1 MSEMQGN--KIVVDPIT-RIEGHLRIEVEVEGGKIKNAWSM-STLFRGLEMILKGRDPRRCAE   59 (99)
T ss_dssp             ------C--EEEECSCC-SSBSCEEEEEEEETTEEEEEEEE-ECBCCCHHHHHTTSCGGCCTT
T ss_pred             CCCCCCC--EEEECCCC-CEEEEEEEEEEEECCEEEEEEEC-CCCCCHHHHHHCCCCHHCCCC
T ss_conf             9877785--48977877-40313899999829989999982-477634989867999884444