Probab=100.00 E-value=0 Score=579.72 Aligned_cols=386 Identities=15% Similarity=0.104 Sum_probs=287.9 Q ss_pred CCEEEEEECCCCCCCCCCEEEEEEEECCEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 61599840686866677559999983998999998804115788987409898785544312123448889999999999 Q gi|254780855|r 6 SRSFTINFGPQHPAAHGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAYALAVE 85 (396) Q Consensus 6 ~~~~~~~~gp~~~~~~g~l~~~~~v~~~~V~~a~~~~g~~~RGfE~il~Gr~~~da~~it~RICGIC~~aH~~Aa~~AiE 85 (396) +.|-.|.|+|+. ++|||+++++++|||+|++|++. |++|||||+||+||+|+|++.||+|||||||++|++|+++|+| T Consensus 2 ~~~~~i~IdPit-RiEG~~~l~l~~d~g~V~~a~~~-~~~~RGfEk~l~gr~~~d~~~it~RICGiC~~aH~~a~~~AvE 79 (534) T d1wuil1 2 SYSGPIVVDPVT-RIEGHLRIEVEVENGKVKNAYSS-STLFRGLEIILKGRDPRDAQHFTQRTCGVCTYTHALASTRCVD 79 (534) T ss_dssp CCCEEEEESSCC-SSBSCEEEEEEEETTEEEEEEEE-ECBCCCHHHHHTTSCGGGHHHHHHTTCSSSTTHHHHHHHHHHH T ss_pred CCCCCEEECCCC-EEEEEEEEEEEEECCEEEEEEEC-CCCCCHHHHHHCCCCHHHHHHHHCCCEEECHHHHHHHHHHHHH T ss_conf 856647977856-26545899999839989999982-4566319898679997896655341003178689999999999 Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------------------------------- Q ss_conf 98388578889999999999999998899987433430564--------------------------------------- Q gi|254780855|r 86 KLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGAL--------------------------------------- 126 (396) Q Consensus 86 ~a~gi~vp~~a~llR~Ll~~~e~i~sH~~h~~~l~~~~~~~--------------------------------------- 126 (396) +|+||+||++|++||+|++++|+||||++|||+|+.+++.. T Consensus 80 ~a~Gi~vP~~a~~lR~L~~~~e~I~sH~l~~~~l~~pD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 159 (534) T d1wuil1 80 NAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPRKTTAADLKAVQDKLKTF 159 (534) T ss_dssp HHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGTCCTGGGGGCCHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHH T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH T ss_conf 99399879889999999999999999999999874530024532333575779998753165323426799988999888 Q ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC--CHHHHHH Q ss_conf --------------------------------189999999999997899755976476336536200078--9899999 Q gi|254780855|r 127 --------------------------------TPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDI--PPELVED 172 (396) Q Consensus 127 --------------------------------~~~~~~~~~r~~~~~~~~~~gG~~~Hp~~~vpGGv~~~~--~~~~~~~ 172 (396) .++.+++++|+.++++++++||+++||++++|||+++.+ +...++. T Consensus 160 ~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~i~~~~~G~~~h~~~~~pGGv~~~~~~~~~~~~~ 239 (534) T d1wuil1 160 VETGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAE 239 (534) T ss_dssp HHTTCCGGGTTCTTTTCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSSCCCEETTEECCGGGGSHHHHHH T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHH T ss_conf 76411477665434578751346701011356789999999999999999982887444521026522578899899999 Q ss_pred HHHHHHHHHHHHHHHHHHH-----HCCHHHH----------------------HHHCCEEEECCCCCCCCCCCCCCCCCC Q ss_conf 9999999999999999998-----4483334----------------------421221123033331023566510136 Q gi|254780855|r 173 IGCWCDSFPSALNDISDLL-----TGNRIFK----------------------QRNVNIGTVKLEDAWGWGFSGVMIRGS 225 (396) Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~----------------------~~~~~~g~~~~~~~~~~~~~G~~~~~~ 225 (396) +...++....+.....+.. ..+..+. .++...|.............++....+ T Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~G~~~~~~~~~~~~~d~~~i~e 319 (534) T d1wuil1 240 FEALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIEE 319 (534) T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHTGGGGGSCCCSCEEEEEEEESSTTCGGGEEEEEEEESTTCTTSCBCCCGGGEEE T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCHHHCEECCCEEECCCCCEECCCCHHHHEE T ss_conf 99999999999999888899998775401565178644120100456555301121037568868765112457256101 Q ss_pred CCCCHHH----HCCCCCCCCCCCCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCC--------------C--- Q ss_conf 7601021----017544334677540010123201221100011687589999999621035--------------7--- Q gi|254780855|r 226 GAAWDLR----KSQPYECYSELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGK--------------N--- 284 (396) Q Consensus 226 g~~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--------------~--- 284 (396) ++..+.. ..+||.......+.......+++|++.+.+....++.++++|......... . T Consensus 320 ~v~~s~y~~~~~~~P~~~~t~p~~~~~~~~~~ysw~kapry~g~~~evGPlAR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (534) T d1wuil1 320 HVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGP 399 (534) T ss_dssp ECTTBTBSSSCCBCGGGCCCCBCCCCTTBTTBCBSSCEEEETTBCCBCSHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCG T ss_pred CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC T ss_conf 47188744775457666777766333465555323115522785303028899986655338211678787898529886 Q ss_pred --CCCCCCCCCHHHCC--HHHHHHHHHHHHHHCC----CCCCCCCC-CCCCCCEEEEEECCCCEEEEEEEECCCCCEEEE Q ss_conf --86720111123030--4489999756754305----75557776-158974899998895117999998799808899 Q gi|254780855|r 285 --KVGPVSASDPKIVP--PKRADMKRSMESLIHH----FKLYTEGY-HVPVGEVYAAVEAPKGEFGVYLISDGGNKPYRC 355 (396) Q Consensus 285 --~~~~~~~~~~~~~~--~~~~~~~~~~e~l~~~----~~~~~~~~-~~~~G~GvG~vEAPRG~L~H~~~~~~~g~i~~~ 355 (396) .........+++.+ .+...++++++.+... ...+..+. .+++|+|+|++|||||+|+||++++ ||+|++| T Consensus 400 ~~~~~~~~R~~aR~~E~~~s~~~~~~~l~~l~~~~~~~~~~~~~p~~~p~~GeG~g~vEApRG~L~H~~~i~-~G~I~~y 478 (534) T d1wuil1 400 EALFSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRIE-DGKIGNF 478 (534) T ss_dssp GGGSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBCCCCCCSSEEEEEEEEETTEEEEEEEEEE-TTEEEEE T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEE-CCEEEEE T ss_conf 556888999999999999999999999997464034578640278779997189999988874289999980-9989898 Q ss_pred EEECCCCCCHH---------HHHHHHCCCCCCH------HHHHHHHCCCCCCCC Q ss_conf 98358756868---------8999970880575------999897609120553 Q gi|254780855|r 356 KIRAPGYAHLQ---------AMEFLCKGHQLAD------VSAILGSLDIVFGEV 394 (396) Q Consensus 356 ~ii~PT~~N~~---------~~e~al~G~~i~D------~~~iirSfDpC~sC~ 394 (396) |||+||+||++ ++|++|+|++++| ++++|||||||+||+ T Consensus 479 ~ii~PT~~N~~p~~~~~~~~~~e~~l~g~~v~d~~~~~~i~~~iRsfDPCisCa 532 (534) T d1wuil1 479 QLVVPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPCIACG 532 (534) T ss_dssp EEECHHHHHHCCCCTTCCCCHHHHHHTTCBCSCTTSCHHHHHHHHHTCCBHHHH T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC T ss_conf 897977010553332455449999827998788630665656640057861532
class: Multi-domain proteins (alpha and beta)
fold: HydB/Nqo4-like
superfamily: HydB/Nqo4-like
family: Nickel-iron hydrogenase, large subunit
domain: Nickel-iron hydrogenase, large subunit
species: Desulfovibrio vulgaris [TaxId: 881]