PSIBLAST alignment of GI: 254780855 and protein with PDB id: 1h2r
>gi|6730443|pdb|1H2R|L Chain L, Three-Dimensional Structure Of Ni-Fe Hydrogenase From Desulfivibrio Vulgaris Miyazaki F In The Reduced Form At 1.4 A Resolution Length = 534
Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/356 (11%), Positives = 82/356 (23%), Gaps = 75/356 (21%)
Query: 112 HLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDI--PPEL 169
H ++ A L + K H + GGV P+
Sbjct: 177 HPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQR 236
Query: 170 VEDIGCWCDSFPSALNDIS--DLLTGNRIFKQRNVNIG---------------------- 205
+ + + ++++ DLL +K G
Sbjct: 237 IAEFEALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFF 296
Query: 206 ---TVKLEDAWGWGFSGVMIRGSGAAWDLRK----SQPYECYSELDFDIPIGKHGDCYDR 258
V D M + P++ ++ + G + +
Sbjct: 297 KPGVVFKRDFKNIKPFDKMQIEEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMK 356
Query: 259 YLVRMMEMRESVKIIRQCVNRLLGKNKVGPV------------------------SASDP 294
M E E+ + + + G KV V +
Sbjct: 357 APRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPEALFSTLGRTAARGIET 416
Query: 295 KIVPPKRADMKRSMESLIHHFKLY--TEGYHVPVGEVYAAVEAPKGEFGVYLISDGGNKP 352
++ M + + I E V AP+G ++ K
Sbjct: 417 AVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRI-EDGKI 475
Query: 353 YRCKIRAPGYA---------HLQAMEFLCKGHQLAD------VSAILGSLDIVFGE 393
++ P ++ +E G +AD + + S D
Sbjct: 476 GNFQLVVPSTWTLGPRCDKNNVSPVEASLIGTPVADAKRPVEILRTVHSFDPCIAC 531