PSIBLAST alignment of GI: 254780855 and protein with PDB id: 1wuj

>gi|85543891|pdb|1WUJ|L Chain L, Three-Dimensional Structure Of The Ni-B State Of [nife]hydrogenase From Desulufovibrio Vulgaris Miyazaki F Length = 534
>gi|85543893|pdb|1WUK|L Chain L, High Resolution Structure Of The Oxidized State Of [nife]hydrogenase From Desulufovibrio Vulgaris Miyazaki F Length = 534

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 82/356 (23%), Gaps = 75/356 (21%)

Query: 112 HLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDI--PPEL 169
           H         ++ A    L     + K             H  +   GGV       P+ 
Sbjct: 177 HPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQR 236

Query: 170 VEDIGCWCDSFPSALNDIS--DLLTGNRIFKQRNVNIG---------------------- 205
           + +         + ++++   DLL     +K      G                      
Sbjct: 237 IAEFEALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFF 296

Query: 206 ---TVKLEDAWGWGFSGVMIRGSGAAWDLRK----SQPYECYSELDFDIPIGKHGDCYDR 258
               V   D         M           +      P++  ++  +    G     + +
Sbjct: 297 KPGVVFKRDFKNIKPFDKMQIEEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMK 356

Query: 259 YLVRMMEMRESVKIIRQCVNRLLGKNKVGPV------------------------SASDP 294
               M E  E+  + +  +    G  KV  V                           + 
Sbjct: 357 APRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPEALFSTLGRTAARGIET 416

Query: 295 KIVPPKRADMKRSMESLIHHFKLY--TEGYHVPVGEVYAAVEAPKGEFGVYLISDGGNKP 352
            ++      M +  +  I                 E    V AP+G    ++      K 
Sbjct: 417 AVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRI-EDGKI 475

Query: 353 YRCKIRAPGYA--------H-LQAMEFLCKGHQLAD------VSAILGSLDIVFGE 393
              ++  P           + L  +E    G  +AD      +   + S D     
Sbjct: 476 GNFQLVVPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPXIAC 531