RPSBLAST alignment of GI: 254780855 and protein with PDBid: 1e3d

>1e3d_B [NIFE] hydrogenase large subunit; molecular modelling, electron transfer; HET: FSX; 1.8A {Desulfovibrio desulfuricans} SCOP: e.18.1.1 Length = 542

 Score =  106 bits (266), Expect = 8e-24
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 21  HGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAY 80
            G LR+ +E++G +++        L RG E +++ +    A  +  R   V       A 
Sbjct: 24  EGHLRIEVEVEGGVIKEARSC-ATLFRGIETILKGRDPRDAQHFTQRTCGVCTYTHALAS 82

Query: 81  ALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMD 122
              +E  +   IP     IR L      +  HL++       
Sbjct: 83  TRCLEDAINKPIPANATYIRNLVLGNQFMHDHLVHFYHLHAL 124