RPSBLAST alignment of GI: 254780855 and protein with PDBid: 1yqw

>1yqw_Q Periplasmic [NIFE] hydrogenase large subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 1yrq_H 3h3x_Q 3cus_Q 3cur_H 1frf_L Length = 549
 Score = 82.2 bits (202), Expect = 2e-16
 Identities = 22/191 (11%), Positives = 42/191 (21%), Gaps = 38/191 (19%)

Query: 210 EDAWGWGFSGVMIRGSGAAWDLRKSQPYECYSELD-FDIPIGKHGDCYDRYLVRMMEMRE 268
                    G + R   A    +          L    +P         R   R +E   
Sbjct: 375 RYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPATALHSTLGRTAARGIETAI 434

Query: 269 SVKIIRQCVNRLLGKNKVGPVSASDPKIVPPKRADMKRSMESLIHHFKLYTEGYHVPVGE 328
               + + +  +                            +S      L  +       +
Sbjct: 435 VCANMEKWIKEM---------------------------ADSGAKDNTLCAKWEMPEESK 467

Query: 329 VYAAVEAPKGEFGVYLISDGGNKPYRCKIRAP---------GYAHLQAMEFLCKGHQLAD 379
                +AP+G    ++   G  K    ++  P                +E    G  +AD
Sbjct: 468 GVGLADAPRGALSHWIRIKGK-KIDNFQLVVPATWNLGPRGAQGDKSPVEEALIGTPIAD 526

Query: 380 VSAILGSLDIV 390
               +  L  V
Sbjct: 527 PKRPVEILRTV 537