HHsearch alignment for GI: 254780856 and conserved domain: COG1905
>COG1905 NuoE NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion].
Probab=100.00 E-value=0 Score=380.55 Aligned_cols=159 Identities=47% Similarity=0.818 Sum_probs=154.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 85658999999999998678432133699999999998266899999999985088799999999764432022278706
Q gi|254780856|r 15 SFSFSEESAIWVNEVISRYPPSRCQSAVIPLLMRAQEQEGWVSRAAIEVVANILDMAYIRVLEIATFYTQFQLSPVGTRA 94 (218)
Q Consensus 15 ~f~fs~e~~~~i~~ii~~yP~~~~~salip~L~~vQ~~~G~Ip~eai~~iA~~L~i~~~~V~~VaTFY~~f~~~P~G~k~ 94 (218)
T Consensus 2 ~~~~~~~~~~~~~~~i~~yp--~~rsAlip~L~~aQ~~~G~l~~~ai~~iA~~L~i~~~~v~~VaTFY~~f~~~P~G-r~ 78 (160)
T COG1905 2 TFAFSAENLELIEAIIAKYP--DKRSALIPLLHIAQEQFGWLPPEAIEEIADMLGIPRARVYGVATFYTQFFLKPVG-RH 78 (160)
T ss_pred CCCCCHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHEEEEEEEHHHCCCCCC-CE
T ss_conf 75322567999999999777--5243788999999998588887899999998599978831014410121357688-74
Q ss_pred EEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHC
Q ss_conf 99961883587708924899999882756475177881899953245667788679985834145889899999999982
Q gi|254780856|r 95 HVQVCGTTPCMLRGCEKLIEVCRNKIHQKPLHRNSDGTLSWEEVECQGACVNAPMVMIGKDTYEDLTPERLEEIIDAFST 174 (218)
Q Consensus 95 ~I~VC~~~~C~l~G~~~l~~~l~~~Lgi~~gett~DG~ftLe~v~CLG~C~~AP~~~Vn~~~y~~lt~e~~~~il~~Lr~ 174 (218)
T Consensus 79 ~i~VC~~t~C~l~Gs~~l~~~l~~~lgi~~gett~DG~ftl~~v~ClGaC~~AP~vmind~~~~~lt~e~l~eil~~~~~ 158 (160)
T COG1905 79 HIRVCTGTACHLKGSEALLKALEKKLGIKPGETTADGKFTLEPVECLGACGQAPVVMINDDVYGRLTPEKLEEILEKLKA 158 (160)
T ss_pred EEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHC
T ss_conf 89980885776517699999999984899897188974887631051454669779998850233899999999999762
Q ss_pred CC
Q ss_conf 88
Q gi|254780856|r 175 GQ 176 (218)
Q Consensus 175 gk 176 (218)
T Consensus 159 ~~ 160 (160)
T COG1905 159 KK 160 (160)
T ss_pred CC
T ss_conf 79