HHsearch alignment for GI: 254780856 and conserved domain: PRK07539
>PRK07539 NADH dehydrogenase subunit E; Validated.
Probab=100.00 E-value=0 Score=386.05 Aligned_cols=154 Identities=48% Similarity=0.799 Sum_probs=151.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 65899999999999867843213369999999999826689999999998508879999999976443202227870699
Q gi|254780856|r 17 SFSEESAIWVNEVISRYPPSRCQSAVIPLLMRAQEQEGWVSRAAIEVVANILDMAYIRVLEIATFYTQFQLSPVGTRAHV 96 (218)
Q Consensus 17 ~fs~e~~~~i~~ii~~yP~~~~~salip~L~~vQ~~~G~Ip~eai~~iA~~L~i~~~~V~~VaTFY~~f~~~P~G~k~~I 96 (218)
T Consensus 1 ~~s~e~~~~i~~ii~~yp~--~~~allp~L~~iQ~~~G~i~~ea~~~iA~~l~i~~~~V~~vatFY~~f~~~P~G-k~~i 77 (154)
T PRK07539 1 ALSAEELAAIEHEIAKYPR--PRSAVIPALKIVQEQRGWVPDEAIEAVADYLGMPAIDVEEVATFYSMIFRQPVG-RHVI 77 (154)
T ss_pred CCCHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC-CEEE
T ss_conf 9598999999999997799--778999999999998799399999999999797999999999986776267899-6489
Q ss_pred EECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHH
Q ss_conf 96188358770892489999988275647517788189995324566778867998583414588989999999998
Q gi|254780856|r 97 QVCGTTPCMLRGCEKLIEVCRNKIHQKPLHRNSDGTLSWEEVECQGACVNAPMVMIGKDTYEDLTPERLEEIIDAFS 173 (218)
Q Consensus 97 ~VC~~~~C~l~G~~~l~~~l~~~Lgi~~gett~DG~ftLe~v~CLG~C~~AP~~~Vn~~~y~~lt~e~~~~il~~Lr 173 (218)
T Consensus 78 ~VC~~~~C~~~Ga~~l~~~l~~~Lgi~~getT~DG~ftl~~v~ClG~C~~aP~~~Vn~~~~~~lt~e~v~~il~~lr 154 (154)
T PRK07539 78 QVCTSTPCWLRGGEAILAALKKKLGIKPGETTADGRFTLLEVECLGACDNAPVVMINDDTYEDLTPEKIDELLDELK 154 (154)
T ss_pred EECCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHCC
T ss_conf 97898257777839999999998499976278998889997465475699996999999877899999999999819