HHsearch alignment for GI: 254780856 and conserved domain: PRK07571
>PRK07571 bidirectional hydrogenase complex protein HoxE; Reviewed.
Probab=100.00 E-value=0 Score=392.61 Aligned_cols=167 Identities=28% Similarity=0.412 Sum_probs=155.2
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 57876679998565899999999999867843213369999999999826689999999998508879999999976443
Q gi|254780856|r 5 RLAEEEFQPSSFSFSEESAIWVNEVISRYPPSRCQSAVIPLLMRAQEQEGWVSRAAIEVVANILDMAYIRVLEIATFYTQ 84 (218)
Q Consensus 5 ~~~~~~~~p~~f~fs~e~~~~i~~ii~~yP~~~~~salip~L~~vQ~~~G~Ip~eai~~iA~~L~i~~~~V~~VaTFY~~ 84 (218)
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~i~~il~ry~~--~~salipiL~~iQe~~Gyip~eai~~vA~~l~l~~a~V~~VaTFY~~ 80 (169)
T PRK07571 3 TDNPTTPPSATHPSGDKRFKVLEATMKRNQY--RQDALIEVLHKAQELFGYLERDLLLYVARQLKLPLSRVYGVATFYHL 80 (169)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 7899999998999835649999999988499--86689999999999829989999999999979699999999879998
Q ss_pred HCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHCCCCHHH
Q ss_conf 20222787069996188358770892489999988275647517788189995324566778867998583414588989
Q gi|254780856|r 85 FQLSPVGTRAHVQVCGTTPCMLRGCEKLIEVCRNKIHQKPLHRNSDGTLSWEEVECQGACVNAPMVMIGKDTYEDLTPER 164 (218)
Q Consensus 85 f~~~P~G~k~~I~VC~~~~C~l~G~~~l~~~l~~~Lgi~~gett~DG~ftLe~v~CLG~C~~AP~~~Vn~~~y~~lt~e~ 164 (218)
T Consensus 81 f~~~P~G-k~~I~VC~~~sC~~~Ga~~l~~~l~~~Lgi~~getT~DG~ftle~v~ClGaC~~AP~~~In~~~~~~lTpek 159 (169)
T PRK07571 81 FSLKPSG-EHTCVVCTGTACYVKGSAAILEDLENELGIKAGETTADGKLSLLTARCLGACGIAPAVVFDGKVAGKQTPES 159 (169)
T ss_pred HCCCCCC-CEEEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCEECCCCCHHH
T ss_conf 5478998-669997088888876989999999998498999706898599998234372689996999999617889899
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999982
Q gi|254780856|r 165 LEEIIDAFST 174 (218)
Q Consensus 165 ~~~il~~Lr~ 174 (218)
T Consensus 160 v~~li~g~~~ 169 (169)
T PRK07571 160 VLEKVQGWLQ 169 (169)
T ss_pred HHHHHHHHHC
T ss_conf 9999999859