RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780857|ref|YP_003065270.1| hypothetical protein
CLIBASIA_03760 [Candidatus Liberibacter asiaticus str. psy62]
         (32 letters)



>gnl|CDD|184273 PRK13721, PRK13721, conjugal transfer ATP-binding protein TraC;
           Provisional.
          Length = 844

 Score = 25.8 bits (57), Expect = 2.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 7   DVVNGMRGNDVEMPYKVFEDLRNY 30
           D++N  R N  E+    F  +RN+
Sbjct: 356 DILNSFRKNGFELISPRFNHMRNF 379


>gnl|CDD|178239 PLN02632, PLN02632, phytoene synthase.
          Length = 334

 Score = 25.1 bits (55), Expect = 4.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 7   DVVNGMRGNDVEMPYKVFEDLRNY 30
           D++ GMR + V+  Y+ F++L  Y
Sbjct: 144 DMIEGMRMDLVKSRYENFDELYLY 167


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.322    0.139    0.416 

Gapped
Lambda     K      H
   0.267   0.0679    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 508,480
Number of extensions: 13058
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 2
Length of query: 32
Length of database: 5,994,473
Length adjustment: 6
Effective length of query: 26
Effective length of database: 5,864,825
Effective search space: 152485450
Effective search space used: 152485450
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.1 bits)