HHsearch alignment for GI: 254780858 and conserved domain: TIGR03028
>TIGR03028 EpsE polysaccharide export protein EpsE. Sequences in this family of proteins are members of a polysaccharide export protein family (pfam02563) which includes the wza protein from E.coli. This family of proteins are homologous to the EpsE protein of the methanolan biosynthesis operon of Methylobacillus species strain 12S. The distribution of this protein appears to be restricted to a subset of exopolysaccharide operons containing a syntenic grouping of genes including a variant of the EpsH exosortase protein. Exosortase has been proposed to be involved in the targetting and processing of proteins containing the PEP-CTERM domain to the exopolysaccharide layer.
Probab=91.82 E-value=0.36 Score=27.86 Aligned_cols=79 Identities=18% Similarity=0.274 Sum_probs=46.5
Q ss_pred EEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCC-----C
Q ss_conf 04764267887872689358987999999861556787110048985245656532100245633422011038-----7
Q gi|254780858|r 239 TKLFSISGHVNYPCTVEESMSITFDELIEKHCGGIRGGWDNLLAVIPGGSSVPCLPAGQMRGAIMDYDGLKEMG-----S 313 (425)
Q Consensus 239 tkl~tvsG~V~~Pg~~evp~Gt~l~eli~~~~GG~~~~~~~~kav~~GG~~~g~l~~~~ld~~~ld~~~l~~~G-----s 313 (425)
T Consensus 78 ~~~V~V~G~V~~PG~y~l~~~~tl~~al~-~AGG~~~~~~~~~-~~~~~r~g~~~-----~-~~idl~~l~~~g~~~~ni 149 (239)
T TIGR03028 78 GQQVSVLGQVNRPGRYPLETAGRVSDVLA-LAGGVTPDGADVI-TLVREREGKIF-----R-KQIDFPALFNPGGDNENI 149 (239)
T ss_pred CEEEEEECCCCCCEEEECCCCCHHHHHHH-HCCCCCCCCCCEE-EEEEEECCEEE-----E-EEECHHHHHHCCCCCCCE
T ss_conf 35899981334650788488762999999-7279997666237-99998799589-----9-886489985267765531
Q ss_pred CCCCCEEEEECC
Q ss_conf 346651799428
Q gi|254780858|r 314 GLGTAAVIVMDR 325 (425)
Q Consensus 314 ~LGsg~iiV~de 325 (425)
T Consensus 150 ~L~~GD~I~V~~ 161 (239)
T TIGR03028 150 LVAGGDIIYVDR 161 (239)
T ss_pred ECCCCCEEEECC
T ss_conf 317999899726