HHsearch alignment for GI: 254780859 and conserved domain: COG2080
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].
Probab=97.86 E-value=2.5e-05 Score=57.44 Aligned_cols=108 Identities=24% Similarity=0.379 Sum_probs=77.1
Q ss_pred CCCEEEEECCEEEE--ECCCCCHHHHHH-HCCCCCCCC-CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 61049999999999--688875889999-868954612-12799964560004799971798870200265664566376
Q gi|254780859|r 2 QMMVKLKVDGIEIE--VPSGFTILQACE-LAGAEIPRF-CFHERLSIAGNCRMCLVEIKGIASKPQASCAMNVSDLRAGP 77 (700)
Q Consensus 2 ~~mv~~~Idg~~v~--v~~g~til~a~~-~~gi~IP~~-Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~v~~gm~~~ 77 (700)
T Consensus 1 ~~~i~ltvNG~~~~~~~~p~~~Ll~~LRd~l~ltgtk~GC~------~g~CGACtVlvDG---~~v~SCl~~a~~----- 66 (156)
T COG2080 1 KMPITLTVNGEPVELDVDPRTPLLDVLRDELGLTGTKKGCG------HGQCGACTVLVDG---EAVNSCLTLAVQ----- 66 (156)
T ss_pred CCCEEEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCC------CCCCCCEEEEECC---EEEHHHHHHHHH-----
T ss_conf 96179998995889975899829999998528877677888------7237950999999---584178899999-----
Q ss_pred CCCCCEEEECCHHHHHHH--HHHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 668537981998999999--99999998278998877888788837998
Q gi|254780859|r 78 NGELPEVFTKSSMVKKAR--AGVMEFLLINHPLDCPICDQGGECDLQDQ 124 (700)
Q Consensus 78 ~~~g~~v~t~s~~v~~~r--~~vle~ll~nHpldCp~Cd~~GeC~LQd~ 124 (700)
T Consensus 67 -~~G~~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~l 114 (156)
T COG2080 67 -AEGAEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATAL 114 (156)
T ss_pred -HCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf -579859974222678887578999999829975788848899999999