HHsearch alignment for GI: 254780859 and conserved domain: PRK05888

>PRK05888 NADH dehydrogenase subunit I; Provisional.
Probab=98.45  E-value=1.5e-07  Score=73.48  Aligned_cols=84  Identities=20%  Similarity=0.326  Sum_probs=54.6

Q ss_pred             CCCCCCCCCCCCCCCCCCC-HHCCC---HHHCCCCCHHHHHHHHCCCCCCEEEECCCC-CCEEEECCCCCCCCCCCCCEE
Q ss_conf             8674777567787888560-21006---432901002364543206874003330666-412662058755565466222
Q gi|254780859|r  131 GSSRYSEEKRAVEDKSIGP-LVKTV---MNRCIHCTRCVRFITEVAGVSELGLVGRGE-NAEITTYLEQSLTSEMQGNII  205 (700)
Q Consensus       131 ~~~r~~~~k~~~~~~~~~p-~i~~d---~~rCI~C~RCVR~c~Ev~g~~~lg~~~RG~-~~~i~~~~~~~~~~e~~Gncv  205 (700)
T Consensus        29 vT~qYP~ek~~~~~r~RG~~~l~~d~~g~ekCi~C~lC~~~CP~--~~I~i~~~~~~~g~k~~~~~~Id~~rCifCGlCv  106 (172)
T PRK05888         29 VTIQYPEEKLPLSPRFRGRHALRRYPNGEERCIACKLCEAICPA--NAITIEAAEREDGRRRTTRYDINFGRCIFCGFCE  106 (172)
T ss_pred             CHHCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCHHHHCCC--CCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf             24009886476785523427764068887403577655655887--7678987508998577457775346057888822


Q ss_pred             ECCCCCCCCCC
Q ss_conf             01212101223
Q gi|254780859|r  206 DLCPVGALTSK  216 (700)
Q Consensus       206 d~CPvGALt~k  216 (700)
T Consensus       107 e~CP~~AI~~t  117 (172)
T PRK05888        107 EACPTDAIVET  117 (172)
T ss_pred             CCCCCCCCCCC
T ss_conf             10888724478