HHsearch alignment for GI: 254780859 and conserved domain: PRK06259
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional.
Probab=98.68 E-value=2.8e-08 Score=78.76 Aligned_cols=171 Identities=22% Similarity=0.370 Sum_probs=91.0
Q ss_pred CCEEEEEC---C-------EEEEEC--CCCCHHHHHHHCCCC-CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 10499999---9-------999968--887588999986895-4612127999645600047999717988702002656
Q gi|254780859|r 3 MMVKLKVD---G-------IEIEVP--SGFTILQACELAGAE-IPRFCFHERLSIAGNCRMCLVEIKGIASKPQASCAMN 69 (700)
Q Consensus 3 ~mv~~~Id---g-------~~v~v~--~g~til~a~~~~gi~-IP~~Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~ 69 (700)
T Consensus 2 ~~i~i~V~R~~pe~d~p~~~~y~v~~~e~mtvL~aL~~I~~~~d~tl~fr~sC-r~giCGsCav~iNG-~p~L--AC~t~ 77 (491)
T PRK06259 2 KMIKVTVKRFEPETDEPHFEEYEVPVTEGMTVLDALEAINKTYDPNIAFRSSC-RAGQCGSCAVRING-EPVL--ACKTE 77 (491)
T ss_pred CEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEHHHHC-CCCCCCCCEEEECC-EEEE--EEEEE
T ss_conf 52899999647778985556676158798809999999986129965515205-68768878788899-6777--65555
Q ss_pred CCCCCCCCCCCCCEEE----EC-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 6456637666853798----19-989999999999999827899887788878883799899838986747775677878
Q gi|254780859|r 70 VSDLRAGPNGELPEVF----TK-SSMVKKARAGVMEFLLINHPLDCPICDQGGECDLQDQAIFFGFGSSRYSEEKRAVED 144 (700)
Q Consensus 70 v~~gm~~~~~~g~~v~----t~-s~~v~~~r~~vle~ll~nHpldCp~Cd~~GeC~LQd~~~~~g~~~~r~~~~k~~~~~ 144 (700)
T Consensus 78 v~d~~~IePl-~fpVikDLvVD~~~~~~k~~-~i~~~~~~~~---------------------------~~~~~~~~~pe 128 (491)
T PRK06259 78 VEDGMIIEPL-DFPVIKDLVVDREPYYKKIA-TLRNYLQAKN---------------------------EKISLEELTPE 128 (491)
T ss_pred CCCCCEEECC-CCCCEECCEEECHHHHHHHH-HHHHHCCCCC---------------------------CCCCCCCCCHH
T ss_conf 1688567348-88621001666299999999-7442216676---------------------------54211237999
Q ss_pred CCCCCHHC-CCHHHCCCCCHHHHHHHHCCCCCCEE-----EEC------CCCCCEEEECCC-CCCCCCCCCCEEECCCC
Q ss_conf 88560210-06432901002364543206874003-----330------666412662058-75556546622201212
Q gi|254780859|r 145 KSIGPLVK-TVMNRCIHCTRCVRFITEVAGVSELG-----LVG------RGENAEITTYLE-QSLTSEMQGNIIDLCPV 210 (700)
Q Consensus 145 ~~~~p~i~-~d~~rCI~C~RCVR~c~Ev~g~~~lg-----~~~------RG~~~~i~~~~~-~~~~~e~~Gncvd~CPv 210 (700)
T Consensus 129 ~----~~~~~~~~~CI~C~~C~s~Cp~~~~~dy~GP~~~~~~~Rf~~DpRD~~~r~~~a~~~gl~~Ct~C~~C~~vCPK 203 (491)
T PRK06259 129 D----IKDIKKLRGCIECLSCISMCPAIKVSDYPGPTFMRQLARFAFDPRDEGDREKEAIDEGLYNCTTCGKCVEVCPK 203 (491)
T ss_pred H----HHHHHHHHHCHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCC
T ss_conf 9----99888776345643237448767577786889999999861688776006899987797437635804443887