HHsearch alignment for GI: 254780859 and conserved domain: PRK06991
>PRK06991 ferredoxin; Provisional.
Probab=97.67 E-value=4.7e-05 Score=55.52 Aligned_cols=95 Identities=18% Similarity=0.278 Sum_probs=69.0
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHCCCCCCEEEECCCCCCEEEE
Q ss_conf 77888788837998998389867477756778788856021006432901002364543206874003330666412662
Q gi|254780859|r 111 PICDQGGECDLQDQAIFFGFGSSRYSEEKRAVEDKSIGPLVKTVMNRCIHCTRCVRFITEVAGVSELGLVGRGENAEITT 190 (700)
Q Consensus 111 p~Cd~~GeC~LQd~~~~~g~~~~r~~~~k~~~~~~~~~p~i~~d~~rCI~C~RCVR~c~Ev~g~~~lg~~~RG~~~~i~~ 190 (700)
T Consensus 43 n~CpPGG~~~~~~LA~lLg~~~~~ld~~~~-~~~p~--~VA~IdE~~CIGCT~CI~aCP----VDAIvGA~k~mHtVi~d 115 (274)
T PRK06991 43 NRCPPGGAEGIARLAALLGKPVIPLDPARG-VERPR--AVAFIDEQLCIGCTLCMQACP----VDAIVGAPKQMHTVVAD 115 (274)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CCCCC--EEEEECCCCCCCCHHHHHCCC----CHHEECCCCCCEEECHH
T ss_conf 869998299999999986889777773337-76786--378965887817203431198----00155267766165642
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 0587555654662220121210122332
Q gi|254780859|r 191 YLEQSLTSEMQGNIIDLCPVGALTSKPF 218 (700)
Q Consensus 191 ~~~~~~~~e~~Gncvd~CPvGALt~k~~ 218 (700)
T Consensus 116 ------~CTGCeLCI~pCPvDCI~MvPv 137 (274)
T PRK06991 116 ------LCTGCDLCVPPCPVDCIDMVPV 137 (274)
T ss_pred ------HCCCCCCCCCCCCCCCEEEEEC
T ss_conf ------1899672456698320154445