HHsearch alignment for GI: 254780859 and conserved domain: PRK08493

>PRK08493 NADH dehydrogenase subunit G; Validated.
Probab=100.00  E-value=0  Score=1088.90  Aligned_cols=577  Identities=21%  Similarity=0.289  Sum_probs=442.2

Q ss_pred             CEEEEECCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             04999999999968887588999986895461212799964560004799971798870200265664566376668537
Q gi|254780859|r    4 MVKLKVDGIEIEVPSGFTILQACELAGAEIPRFCFHERLSIAGNCRMCLVEIKGIASKPQASCAMNVSDLRAGPNGELPE   83 (700)
Q Consensus         4 mv~~~Idg~~v~v~~g~til~a~~~~gi~IP~~Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~v~~gm~~~~~~g~~   83 (700)
T Consensus         1 mv~i~Idg~~~~~~~g~til~aa~~~gi~IP~lCy~~~l~p~g~Cr~C~VEv~G---~~~~sC~t~v~~GM~--------   69 (819)
T PRK08493          1 MITININGKEIECQEGEYILNAARRNGIFIPAICYLSGCSPTLACRLCMVEADG---KRVYSCNTKAKEGMN--------   69 (819)
T ss_pred             CCEEEECCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECC---CCCCCCCCCCCCCCE--------
T ss_conf             918999999999699997999999739985614489992968877663898789---482674888899999--------


Q ss_pred             EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCH
Q ss_conf             98199899999999999998278998877888788837998998389867477756778788856021006432901002
Q gi|254780859|r   84 VFTKSSMVKKARAGVMEFLLINHPLDCPICDQGGECDLQDQAIFFGFGSSRYSEEKRAVEDKSIGPLVKTVMNRCIHCTR  163 (700)
Q Consensus        84 v~t~s~~v~~~r~~vle~ll~nHpldCp~Cd~~GeC~LQd~~~~~g~~~~r~~~~k~~~~~~~~~p~i~~d~~rCI~C~R  163 (700)
T Consensus        70 V~T~s~~v~~~r~~v~e~ll~nHpl~C~vCd~~g~C~Lq~~~~~~gv~~~~~~~~~~~~~~~~-~~~~~~d~~~CI~C~r  148 (819)
T PRK08493         70 ILTNTPNLNDERNAIMQTYDVNHPLECGVCDKSGECELQNFTHEMRVNHQKYAIKDTHKPHKS-WGKINYDPSLCIVCER  148 (819)
T ss_pred             EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCEEECCCCCCCCCH
T ss_conf             997999999999999999985799878878987885899999985999877876677775678-8846644131740768


Q ss_pred             HHHHHHHCCCCCCEEEECCCCCCEEEECCC-----------------------CCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf             364543206874003330666412662058-----------------------755565466222012121012233233
Q gi|254780859|r  164 CVRFITEVAGVSELGLVGRGENAEITTYLE-----------------------QSLTSEMQGNIIDLCPVGALTSKPFAF  220 (700)
Q Consensus       164 CVR~c~Ev~g~~~lg~~~RG~~~~i~~~~~-----------------------~~~~~e~~Gncvd~CPvGALt~k~~~~  220 (700)
T Consensus       149 CVr~C~ev~g~~~l~~~~rG~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~~~~~~C~~CG~Cv~vCP~GAL~~k~~~~  228 (819)
T PRK08493        149 CVTVCKDKIGESALKTVPRGLDAVDKSFKESMPKDAYAVWSKKQKSLIGPVGGETLDCSFCGECIAVCPVGALSSSDFQY  228 (819)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
T ss_conf             99998876186336651367644334223434432100124344321135678876770114257539753253665423


Q ss_pred             CCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECC---CCCCCCCCEECCCCCCCCCHHHH-CCCCHHHEECCCCEE
Q ss_conf             34443023522012116886436675159999885247---88877774113554221000000-001101100222202
Q gi|254780859|r  221 TGRSWELTKTDSIDVMDALGSAIRIDARGCEVMRILPR---INESINEEWISDKTRFIWDGLKV-QRLDCPYARINGRLK  296 (700)
Q Consensus       221 ~~Rpwel~~~~SvC~~C~~GC~i~v~v~~g~i~rv~~~---~~~~vN~g~lC~KGRf~~d~~~~-dRL~~PliR~~g~~~  296 (700)
T Consensus       229 ~~r~w~~~k~~t~C~~CgvGC~~~~~vk~~~i~~~~~~i~~v~n~~N~g~lCvkGRfg~df~ns~~R~e~~---------  299 (819)
T PRK08493        229 TSNAWELKKIPSTCPHCSAGCLIYYDVKHSSILNQESKIYRVSNDFYFNPLCGAGRFAFDFSNEAPKDEKA---------  299 (819)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH---------
T ss_conf             46664012004418988899602899854600134565236778755365425660676666776455355---------


Q ss_pred             ECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHH-H-HCCCCCCCCCHHHHH
Q ss_conf             32414566888752013445314785043232355547889863687724202334446643-4-012546778787740
Q gi|254780859|r  297 PVSWDYALKAIKSAVLSSDVKLGAVVGDLSSVEEIYALKLLMQSLGCENFDCRQNGEYLDPS-Y-GRASYIFNPTIQGIE  374 (700)
Q Consensus       297 ~iSWdeAl~~ia~~L~~~~~~~g~~~g~~~t~Ee~y~~k~l~~~lGt~nid~~~~~~~~~~~-~-~~~~~~~~~~i~die  374 (700)
T Consensus       300 ---l~~a~~~~k~~-----~ai~--fss~~TNEEayllQklr~~~G~n~~n~~a~~~q~~~~~~~t~g~g~~t~si~di~  369 (819)
T PRK08493        300 ---FKEAVEAFKKA-----EAIK--FNSFITNEEALILERLKKKFGLKLYNEEALKFQQFLKVFSEVSGKSYSANLEDIK  369 (819)
T ss_pred             ---HHHHHHHHCCC-----CHHH--CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf             ---99998753335-----4011--0456758999999999998588887788888899999998752777778888886


Q ss_pred             CCCEEEEECCCCCCCCCCHHHHHHHHHH-CCCCEEECCCCCHHHH----HHHHC--CCCCHHHH------H---------
Q ss_conf             1857999738532257310257789997-5997066168501223----34430--48986788------8---------
Q gi|254780859|r  375 EADAMLIIGSNPRLEAAVLNARIRKRWR-RGNFPIAVIGDVGELR----YKYEH--LGNGSEAL------A---------  432 (700)
Q Consensus       375 ~ad~illiG~Np~~~~Pvl~~rirka~~-~g~~~I~vi~~~~~l~----~~~~~--l~~~~e~l------~---------  432 (700)
T Consensus       370 ~ad~IiviGsn~te~hPV~~~~ik~A~k~~GakLIv~dP~~~~~~~~~a~~~~~~~~~pGt~~~~l~~i~~~i~~~~~~~  449 (819)
T PRK08493        370 TSDFVVVAGSSLKTDNPLLRYAINNALKMNKASGLYFHPIKDNVIANLSKNFICITHEVGAEEIILGLLLKKFLEEEALL  449 (819)
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCHHH
T ss_conf             29879997568543473899999999984697279976765278887654124504799949999999999875132235


Q ss_pred             -HHHCCCCHH------------------------------HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
Q ss_conf             -882687788------------------------------9998723531023544332104746989898999887410
Q gi|254780859|r  433 -DLVSGQHPF------------------------------FKKLQEATRPLIIVGQGALRASDNVEVMANIAKLVIDVGG  481 (700)
Q Consensus       433 -~~~~g~~~~------------------------------~~~l~~a~~~~ii~G~g~~~~~~g~~~~~al~~l~~~~G~  481 (700)
T Consensus       450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~  529 (819)
T PRK08493        450 KSLEEFFDSLVDEAALKALEEERKKVLEQAEEGCENQEEVKKEVPKKVKKIPEVDTYLLLEELGINEETLEKLLKLLAKK  529 (819)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf             78998788888777665567778877777776777899999999998887778889999987286656677777776511


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHCCCCCCC-CC------------CCHHH---HHHCCCEEEECCCCHHHCCCCCCEEEHH
Q ss_conf             58533475424675310452101776586-52------------36888---8601675998076422016654345022
Q gi|254780859|r  482 ISDSWNGFAVLHTVASRVGALDLGFVPAD-DT------------INAMN---ILDKTDIVFLLGADELDFSDKQALTVYI  545 (700)
Q Consensus       482 ig~~g~G~~~L~~~~n~~Ga~d~g~~P~~-~~------------~~~~~---~~~~~~~l~~~g~d~l~~~~~~~fvV~~  545 (700)
T Consensus       530 ~~~~l~~G~dl~~~~n~~~~a~~~~l~~~~~~~~~~~~p~~~~~lgv~~i~~l~~~~~~~yi~G~n------------~~  597 (819)
T PRK08493        530 NNFTLVVGEDLYAHKNAKNLAKLLGLIAKKSAFKVLLIPPSTNTLGVALICDLSEEIEEGKTIGYN------------EK  597 (819)
T ss_pred             CCCCEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCHHHHCCCCCCC------------CC
T ss_conf             586424457755687605378765053346761366337877753124443112012121011543------------00


Q ss_pred             HHHHHHHHHHCCEEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             11666688745577047862024720882088674204432885557407999999999807799687989999999997
Q gi|254780859|r  546 GSHGDRGAQSADVILPGAAYTEKSGLWVNTEGRVQMGMRAIFPPGDAKEDWEIICALADELKCSLPFSSLSQLRSHLYSH  625 (700)
Q Consensus       546 d~~~t~tA~~ADVVLP~a~~~Ek~Gtf~N~EgRvQ~~~~av~p~geak~dw~Il~~La~~LG~~~~~~~~~ei~~ei~~~  625 (700)
T Consensus       598 ~dFl~~t~~~ADVvLPA~~--EkEGTFTNtErRVQ~~~~Al~~~G------~~l~DiA~~lG~~~~y~--~~~~~~~~-~  666 (819)
T PRK08493        598 GDFTISSLEDADLILPALN--QQEGTFTNIDKRVVPTNAALPFEG------YDLNDIANALGFDEEYT--IDYTKKLP-T  666 (819)
T ss_pred             CCEEECCCCCCCEEECCCC--CCCCCEECCCCEEECCCCCCCCCC------HHHHHHHHHCCCCCCCC--HHHHHHCC-C
T ss_conf             0233022045887605871--246885887574552301569983------52999999718986433--35677553-3


Q ss_pred             CCCCCCCCC
Q ss_conf             811105542
Q gi|254780859|r  626 HPHFMQLDE  634 (700)
Q Consensus       626 ~P~~~~~~~  634 (700)
T Consensus       667 ~~~~~gi~~  675 (819)
T PRK08493        667 EKGFKAIEF  675 (819)
T ss_pred             CCCCCCCCH
T ss_conf             367467766