HHsearch alignment for GI: 254780859 and conserved domain: PRK09477
>PRK09477 napH quinol dehydrogenase membrane component; Provisional.
Probab=98.08 E-value=6.8e-07 Score=68.79 Aligned_cols=64 Identities=17% Similarity=0.319 Sum_probs=41.7
Q ss_pred CCHHHCCCCCHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 06432901002364543206874003330666412662058755565466222012121012233233344
Q gi|254780859|r 153 TVMNRCIHCTRCVRFITEVAGVSELGLVGRGENAEITTYLEQSLTSEMQGNIIDLCPVGALTSKPFAFTGR 223 (700)
Q Consensus 153 ~d~~rCI~C~RCVR~c~Ev~g~~~lg~~~RG~~~~i~~~~~~~~~~e~~Gncvd~CPvGALt~k~~~~~~R 223 (700)
T Consensus 221 ~~~~~C~~C~~C~~VCP~~~vir---~~l~~~~--~~~~v-~~~eCI~CG~CIDvC~~~al~f~-~r~~~~ 284 (287)
T PRK09477 221 HDREKCTRCMDCFHVCPEPQVLR---PPLKGKQ--SSPQV-LSGDCTTCGRCIDVCSEDVFNFT-IRFKSG 284 (287)
T ss_pred CCCCCCCCCCHHHHHCCCCCCCC---HHHCCCC--CCCCC-CCCCCCCHHHHHHHHCCCCEEEE-EECCCC
T ss_conf 78875809235767579954244---4431444--46884-88310536599967181551544-212788