HHsearch alignment for GI: 254780859 and conserved domain: PRK10330

Probab=97.19  E-value=0.00028  Score=49.96  Aligned_cols=94  Identities=12%  Similarity=0.163  Sum_probs=53.1

Q ss_pred             CCHHCCCHHHCCCCCHHHHHHHHCCCCC-CEE-EECCCCCCEEEEC----CCCCCCCCCC--CCEEECCCCCCCCCCCCC
Q ss_conf             6021006432901002364543206874-003-3306664126620----5875556546--622201212101223323
Q gi|254780859|r  148 GPLVKTVMNRCIHCTRCVRFITEVAGVS-ELG-LVGRGENAEITTY----LEQSLTSEMQ--GNIIDLCPVGALTSKPFA  219 (700)
Q Consensus       148 ~p~i~~d~~rCI~C~RCVR~c~Ev~g~~-~lg-~~~RG~~~~i~~~----~~~~~~~e~~--Gncvd~CPvGALt~k~~~  219 (700)
T Consensus         2 ~k~~viD~~rCiGC~aC~vAC~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~HC~~p~C~~vCP~gAi~-k~--   78 (181)
T PRK10330          2 NRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNVSTATVCRQCEDAPCANVCPNGAIS-RD--   78 (181)
T ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEE-EC--
T ss_conf             848999789370611899998798647777654355310204887357765058748798997337768777699-74--


Q ss_pred             CCCCCCCEEEEEECCCCCCCCCEEEE
Q ss_conf             33444302352201211688643667
Q gi|254780859|r  220 FTGRSWELTKTDSIDVMDALGSAIRI  245 (700)
Q Consensus       220 ~~~Rpwel~~~~SvC~~C~~GC~i~v  245 (700)
T Consensus        79 -~G~V~vd~~~CiGC~~C~~ACPyga  103 (181)
T PRK10330         79 -KGFVHVMQERCIGCKTCVVACPYGA  103 (181)
T ss_pred             -CCEEEECCCCCCCCCCHHHCCCCCC
T ss_conf             -9959985472927293013399998