HHsearch alignment for GI: 254780859 and conserved domain: PRK12576

>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional.
Probab=97.96  E-value=2.8e-06  Score=64.38  Aligned_cols=170  Identities=21%  Similarity=0.320  Sum_probs=87.1

Q ss_pred             ECCEEEEECCCCCHHHHHHHCCC-CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEE
Q ss_conf             99999996888758899998689-54612127999645600047999717988702002656645663766685-37981
Q gi|254780859|r    9 VDGIEIEVPSGFTILQACELAGA-EIPRFCFHERLSIAGNCRMCLVEIKGIASKPQASCAMNVSDLRAGPNGEL-PEVFT   86 (700)
Q Consensus         9 Idg~~v~v~~g~til~a~~~~gi-~IP~~Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~v~~gm~~~~~~g-~~v~t   86 (700)
T Consensus        20 ~~~y~v~~~~~~tvLd~L~~IK~~~D~sL~fR~sC-r~giCGSCam~ING-~~~L--AC~t~v~d~~~--~~~~~I~Ie-   92 (311)
T PRK12576         20 WQEYEVEVDRGTQVTEALRRIKEEQDPTLAYRASC-HMAVCGSCGMKING-EPRL--ACKTLVLDVAK--EGNNVVTVE-   92 (311)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCC-CCCCCCCCEEEECC-CCCC--CEEEEHHHHHH--CCCCCEEEE-
T ss_conf             57999967999979999999996149972674478-88888757577899-3342--12205555410--569968998-


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHH-HHHHHHHCCCC--CCCCCCCCCC--CCC--CCC--CHHCC-CH
Q ss_conf             99899999999999998278998-877888788837-99899838986--7477756778--788--856--02100-64
Q gi|254780859|r   87 KSSMVKKARAGVMEFLLINHPLD-CPICDQGGECDL-QDQAIFFGFGS--SRYSEEKRAV--EDK--SIG--PLVKT-VM  155 (700)
Q Consensus        87 ~s~~v~~~r~~vle~ll~nHpld-Cp~Cd~~GeC~L-Qd~~~~~g~~~--~r~~~~k~~~--~~~--~~~--p~i~~-d~  155 (700)
T Consensus        93 --------------------PL~~~pV-----ikDLvVD~~~f~~k~~~vkPwl~~~~~~~~~~~e~~qspee~~~l~~~  147 (311)
T PRK12576         93 --------------------PLDNFKV-----VRDLIVDFDEFYERMRKVKPRLYPREEVLEGKGEYRLLPEDQMELWKF  147 (311)
T ss_pred             --------------------ECCCCCC-----CCCCEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             --------------------6899973-----222511369999998732762505888889864204799999988605


Q ss_pred             HHCCCCCHHHHHHHHCCCCCCEEEEC--------------C--CCCCEEEECCCCCCCCCCCCCEEECCCCCC
Q ss_conf             32901002364543206874003330--------------6--664126620587555654662220121210
Q gi|254780859|r  156 NRCIHCTRCVRFITEVAGVSELGLVG--------------R--GENAEITTYLEQSLTSEMQGNIIDLCPVGA  212 (700)
Q Consensus       156 ~rCI~C~RCVR~c~Ev~g~~~lg~~~--------------R--G~~~~i~~~~~~~~~~e~~Gncvd~CPvGA  212 (700)
T Consensus       148 ~~CIlCg~C~s~Cp~~~~n~~--ylGPaal~ka~R~~~DsRD~~~~eRl~~~~~Gvw~C~~c~~C~~vCPK~i  218 (311)
T PRK12576        148 AQCIWCGLCVSACPVVAIDEE--FLGPAALAKGYRFLADPRDTITEERIKILIDSAWRCTFCYSCSNVCPKDV  218 (311)
T ss_pred             HHCHHHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
T ss_conf             434225078601899687988--65889999999874688765189999998548716621643675588999