HHsearch alignment for GI: 254780859 and conserved domain: TIGR00509

>TIGR00509 bisC_fam molybdopterin guanine dinucleotide-containing S/N-oxide reductases; InterPro: IPR006658 This enzyme family shares sequence similarity and a requirement for a molydenum cofactor as the only prosthetic group. The form of the cofactor is a single molybdenum atom coordinated by two molybdopterin guanine dinucleotide molecules. Members of the family include biotin sulphoxide reductase, dimethylsulphoxide reductase, and trimethylamine-N-oxide reductase, although a single member may show all those activities and related activities; it may not be possible to resolve the primary function for members of this family by sequence comparison alone. A number of similar molybdoproteins in which the N-terminal region contains a CXXXC motif and may bind an iron-sulphur cluster are excluded from this set, including formate dehydrogenases and nitrate reductases. Also excluded is the A chain of a heteromeric, anaerobic DMSO reductase, which also contains the CXXXC motif . ; GO: 0016491 oxidoreductase activity, 0006118 electron transport.
Probab=99.93  E-value=4.8e-24  Score=192.69  Aligned_cols=377  Identities=18%  Similarity=0.223  Sum_probs=238.8

Q ss_pred             EEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCHHHH-CCCCHHHEECC---------------CCEEECCHHHHHH
Q ss_conf             3667515999988524788877774113554221000000-00110110022---------------2202324145668
Q gi|254780859|r  242 AIRIDARGCEVMRILPRINESINEEWISDKTRFIWDGLKV-QRLDCPYARIN---------------GRLKPVSWDYALK  305 (700)
Q Consensus       242 ~i~v~v~~g~i~rv~~~~~~~vN~g~lC~KGRf~~d~~~~-dRL~~PliR~~---------------g~~~~iSWdeAl~  305 (700)
T Consensus         6 ~~~~~v~~G~~~~~~p~~~d~~P~~~~~~----~~~~~~~~~r~~~P~vr~~~l~~~~~~~~~~rG~~~f~~vsWd~ald   81 (802)
T TIGR00509         6 AFTATVKDGKIVAVTPFASDPNPSPLLEG----VPDQVYSESRIKYPMVRKGWLENGGLSDRSGRGREEFVRVSWDEALD   81 (802)
T ss_pred             EEEEEECCCEEEEECCCCCCCCCCHHHHH----HHHCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHH
T ss_conf             14788717534420000036665067775----43204654564041134576626787763335665401112889986


Q ss_pred             HH-HHHHCCCCCCEEE---EECCC-CCC------HHHHHHHHHHH-HCCCC--CEE---CCCCCCCCCHHHHC---CCCC
Q ss_conf             88-7520134453147---85043-232------35554788986-36877--242---02334446643401---2546
Q gi|254780859|r  306 AI-KSAVLSSDVKLGA---VVGDL-SSV------EEIYALKLLMQ-SLGCE--NFD---CRQNGEYLDPSYGR---ASYI  365 (700)
Q Consensus       306 ~i-a~~L~~~~~~~g~---~~g~~-~t~------Ee~y~~k~l~~-~lGt~--nid---~~~~~~~~~~~~~~---~~~~  365 (700)
T Consensus        82 l~g~~~~~r~~~~~g~~~~~~~sygGW~~~G~~h~~~~l~~r~~~~~~Gg~~g~~g~ys~ga~~~i~p~~~G~~l~e~~~  161 (802)
T TIGR00509        82 LVGAGELKRVRKDHGPAAIFAGSYGGWGSAGRLHHASTLLQRFLNTLLGGYVGHGGDYSTGAAQVILPHVVGDDLLEVYE  161 (802)
T ss_pred             HHCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             52302345534303641000145554234430356789999999876255435765421111345655554378998742


Q ss_pred             CCCCHH-HHHCCCEEEEECCCCCCCCCCHH---------HHHHHHHHCCCC---EEECCCCCHHHHHH--------HHCC
Q ss_conf             778787-74018579997385322573102---------577899975997---06616850122334--------4304
Q gi|254780859|r  366 FNPTIQ-GIEEADAMLIIGSNPRLEAAVLN---------ARIRKRWRRGNF---PIAVIGDVGELRYK--------YEHL  424 (700)
Q Consensus       366 ~~~~i~-die~ad~illiG~Np~~~~Pvl~---------~rirka~~~g~~---~I~vi~~~~~l~~~--------~~~l  424 (700)
T Consensus       162 ~~t~w~~~~~~~~~~v~wg~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~g~~~~~~~~P~~~~~~~~~~~~~d~~~w~  241 (802)
T TIGR00509       162 QQTTWPLILENSKVLVLWGADPLKTARSIAWGSPDHPGYEYYGRLKAKGKRGEIEVISIDPLRTETAEFFGPLDDRAEWI  241 (802)
T ss_pred             HCCCHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEE
T ss_conf             01312666515636888447640124441465665454124789973277650468873663011588716744551263


Q ss_pred             ----------------------CCCHHHHHHHHCCCCHHHH-------------------------------HHHHCCCC
Q ss_conf             ----------------------8986788888268778899-------------------------------98723531
Q gi|254780859|r  425 ----------------------GNGSEALADLVSGQHPFFK-------------------------------KLQEATRP  451 (700)
Q Consensus       425 ----------------------~~~~e~l~~~~~g~~~~~~-------------------------------~l~~a~~~  451 (700)
T Consensus       242 ~~~p~td~~l~lg~a~~l~~~~~~d~~fl~~y~~G~~~f~~yl~G~~d~~Pk~~~Wa~~~~G~~a~~~~~la~~~~~~rt  321 (802)
T TIGR00509       242 PPNPGTDVALMLGLAHTLVTEGLYDKDFLAKYTSGFEKFLPYLLGESDGTPKTAEWASKITGVPAETIKELARLFASKRT  321 (802)
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             36787517888877778763241246788651456678899870677888766688887507888999999987654211


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH-HCC---CCC-----CCC-----------
Q ss_conf             023544332104746989898999887410585334754246753104521-017---765-----865-----------
Q gi|254780859|r  452 LIIVGQGALRASDNVEVMANIAKLVIDVGGISDSWNGFAVLHTVASRVGAL-DLG---FVP-----ADD-----------  511 (700)
Q Consensus       452 ~ii~G~g~~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~~L~~~~n~~Ga~-d~g---~~P-----~~~-----------  511 (700)
T Consensus       322 ~l~~~w~~qr~~~Geq~~W~~~~la~~lGq~G~pGGGfG~~~~~~g~~g~p~~~g~~~~~~~~~~~~~~~~g~~~~~~~~  401 (802)
T TIGR00509       322 MLTAGWSLQRAQHGEQPHWMLVTLAAMLGQIGLPGGGFGFGYHYSGGGGAPSAAGKLPALSQGSNSVSGPPGRADNGWDD  401 (802)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
T ss_conf             12222345655405516899999998851036787740023224565567522342111356555656776655320001


Q ss_pred             -------CCCHHHH----------------HHCCCEEEECCCCHH----------HCCCCCCEEEHHHHHHHHHHHHCCE
Q ss_conf             -------2368888----------------601675998076422----------0166543450221166668874557
Q gi|254780859|r  512 -------TINAMNI----------------LDKTDIVFLLGADEL----------DFSDKQALTVYIGSHGDRGAQSADV  558 (700)
Q Consensus       512 -------~~~~~~~----------------~~~~~~l~~~g~d~l----------~~~~~~~fvV~~d~~~t~tA~~ADV  558 (700)
T Consensus       402 ~~~~~~P~ar~~d~l~~Pg~~~~~~G~~~~~P~~k~~~w~Gg~p~~hh~d~n~l~~a~~~~~~~~~~~~~wt~~a~~adi  481 (802)
T TIGR00509       402 GGLSFIPVARISDALLNPGKEIDYNGKELKLPDIKMVYWAGGNPFHHHQDTNRLIKAWRKPETVIVHEPYWTPTAKHADI  481 (802)
T ss_pred             CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHCCCCE
T ss_conf             33210017889999857896010376301268610788628885643221268998631554588732653400000103


Q ss_pred             EECCCCCCCCC-----CEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHH
Q ss_conf             70478620247-----20882088674204432885557407999999999807-79968798999999999
Q gi|254780859|r  559 ILPGAAYTEKS-----GLWVNTEGRVQMGMRAIFPPGDAKEDWEIICALADELK-CSLPFSSLSQLRSHLYS  624 (700)
Q Consensus       559 VLP~a~~~Ek~-----Gtf~N~EgRvQ~~~~av~p~geak~dw~Il~~La~~LG-~~~~~~~~~ei~~ei~~  624 (700)
T Consensus       482 v~p~tt~~er~d~~~~g~~~~~--~~~~~~~~v~P~~ea~~d~~~f~~l~~~~g~~~~~fteg~~~~~W~~~  551 (802)
T TIGR00509       482 VLPATTSFERNDLTMAGDYSNP--GILAMKQVVPPLFEARNDYDIFAALAERLGGVEEAFTEGKDEMGWLKH  551 (802)
T ss_pred             EECCCCCCCCCCHHHHCCCCCC--EEEECHHHCCCHHCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH
T ss_conf             3213342001202220343455--011002121410104431589999998616711222045026899999