HHsearch alignment for GI: 254780859 and conserved domain: TIGR02066
>TIGR02066 dsrB sulfite reductase, dissimilatory-type beta subunit; InterPro: IPR011808 Dissimilatory sulphite reductase catalyzes the six-electron reduction of sulphite to sulphide, as the terminal reaction in dissimilatory sulphate reduction. It remains unclear however, whether trithionate and thiosulphate serve as intermediate compounds to sulphide, or as end products of sulphite reduction . Sulphite reductase is a multisubunit enzyme composed of dimers of either alpha/beta or alpha/beta/gamma subunits, each containing a siroheme and iron sulphur cluster prosthetic centre . Found in sulphate-reducing bacteria, these genes are commonly located in a unidirectional gene cluster . This entry describes the beta subunit of sulphite reductase.; GO: 0018551 hydrogensulfite reductase activity, 0051539 4 iron 4 sulfur cluster binding, 0006118 electron transport.
Probab=91.88 E-value=0.084 Score=32.03 Aligned_cols=97 Identities=20% Similarity=0.315 Sum_probs=46.7
Q ss_pred CCCCCEEECCCCCCCCCCCCC-CCCCCCCEEEEEECCCCCC---CCC-EEEEE-CCCCEEEEEECCCCCCCCCCEECCCC
Q ss_conf 546622201212101223323-3344430235220121168---864-36675-15999988524788877774113554
Q gi|254780859|r 199 EMQGNIIDLCPVGALTSKPFA-FTGRSWELTKTDSIDVMDA---LGS-AIRID-ARGCEVMRILPRINESINEEWISDKT 272 (700)
Q Consensus 199 e~~Gncvd~CPvGALt~k~~~-~~~Rpwel~~~~SvC~~C~---~GC-~i~v~-v~~g~i~rv~~~~~~~vN~g~lC~KG 272 (700)
T Consensus 205 esqv~~Va~CPtgAl~p~kv~~~~~~~~~l~v~~~kCi~CG~Cy~~Cpa~~~~D~~~~g~Ai~vG--------Gk~snar 276 (366)
T TIGR02066 205 ESQVSVVAACPTGALKPRKVRIVEGEKKSLEVDEEKCIYCGNCYTMCPAMPIDDPEDDGAAILVG--------GKLSNAR 276 (366)
T ss_pred CCCEEEEEECCHHHCCCCEEEEECCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEC--------CEECCCC
T ss_conf 45278994477000553256654673345898473111027745531278777876771699925--------5232478
Q ss_pred CCCCCHHHH--CCCCHHHEECCCCEEECCHHHHHHHHHHHHCC
Q ss_conf 221000000--00110110022220232414566888752013
Q gi|254780859|r 273 RFIWDGLKV--QRLDCPYARINGRLKPVSWDYALKAIKSAVLS 313 (700)
Q Consensus 273 Rf~~d~~~~--dRL~~PliR~~g~~~~iSWdeAl~~ia~~L~~ 313 (700)
T Consensus 277 ------~~P~l~kv~~p~iPn~----PPRwpe~v~~VKkil~~ 309 (366)
T TIGR02066 277 ------VKPRLSKVVVPWIPNN----PPRWPEIVAVVKKILEA 309 (366)
T ss_pred ------CCCEEEEEEEECCCCC----CCCHHHHHHHHHHHHHH
T ss_conf ------7871568976056822----26607899999899899