>cd02752 MopB_Formate-Dh-Na-like Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.

Probab=100.00 E-value=0 Score=606.30 Aligned_cols=381 Identities=20% Similarity=0.223 Sum_probs=322.5 Q ss_pred EECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCHH-HHCCCCHHHEECCC--CEEECCHHHHHHHH Q ss_conf 2012116886436675159999885247888777741135542210000-00001101100222--20232414566888 Q gi|254780859|r 231 DSIDVMDALGSAIRIDARGCEVMRILPRINESINEEWISDKTRFIWDGL-KVQRLDCPYARING--RLKPVSWDYALKAI 307 (700) Q Consensus 231 ~SvC~~C~~GC~i~v~v~~g~i~rv~~~~~~~vN~g~lC~KGRf~~d~~-~~dRL~~PliR~~g--~~~~iSWdeAl~~i 307 (700) T Consensus 1 rt~C~yC~vgCgl~~~v~dgkvv~veGdpd~PvN~G~LC~KG~~~~~~v~~pdRL~~PL~R~~Gsg~w~~ISWDEAld~I 80 (649) T cd02752 1 RTICPYCSVGCGLIAYVQNGVWVHQEGDPDHPVNRGSLCPKGAALRDFVHSPKRLKYPMYRAPGSGKWEEISWDEALDEI 80 (649) T ss_pred CCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCEECCCHHHHHHHCCCCCCCCCCEEECCCCCCEEECCHHHHHHHH T ss_conf 97893862678859999799899957689998788538935131476507986314988878999974785599999999 Q ss_pred HHHHCCCCCCE-----------------EEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHC----CCCCC Q ss_conf 75201344531-----------------4785043232355547889863687724202334446643401----25467 Q gi|254780859|r 308 KSAVLSSDVKL-----------------GAVVGDLSSVEEIYALKLLMQSLGCENFDCRQNGEYLDPSYGR----ASYIF 366 (700) Q Consensus 308 a~~L~~~~~~~-----------------g~~~g~~~t~Ee~y~~k~l~~~lGt~nid~~~~~~~~~~~~~~----~~~~~ 366 (700) T Consensus 81 A~klk~ird~~~~~~~~~g~~~~gp~sia~~gs~~~~nEe~yl~~kf~r~lGt~nid~~aRlChsstv~gl~~tfG~ga~ 160 (649) T cd02752 81 ARKMKDIRDASFVEKNAAGVVVNRPDSIAFLGSAKLSNEECYLIRKFARALGTNNLDHQARIUHSPTVAGLANTFGRGAM 160 (649) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC T ss_conf 99999999975311023442147888079986688783799999999998298754676664527899999986078988 Q ss_pred CCCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH-CCCCEEECCCCCHHHH---HHHHCCCCCHHH-----H------ Q ss_conf 787877401857999738532257310257789997-5997066168501223---344304898678-----8------ Q gi|254780859|r 367 NPTIQGIEEADAMLIIGSNPRLEAAVLNARIRKRWR-RGNFPIAVIGDVGELR---YKYEHLGNGSEA-----L------ 431 (700) Q Consensus 367 ~~~i~die~ad~illiG~Np~~~~Pvl~~rirka~~-~g~~~I~vi~~~~~l~---~~~~~l~~~~e~-----l------ 431 (700) T Consensus 161 tn~~~Di~~ad~ili~G~N~ae~hPv~~~~i~~ak~k~GaKlIVVDPR~t~TA~~AD~~l~iRPGTDiAll~gm~~~ii~ 240 (649) T cd02752 161 TNSWNDIKNADVILVMGGNPAEAHPVSFKWILEAKEKNGAKLIVVDPRFTRTAAKADLYVPIRSGTDIAFLGGMINYIIR 240 (649) T ss_pred CCCHHHHHHCCEEEEECCCCHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCEECCCCCCCHHHHHHHHHHHHHH T ss_conf 88976797599999989880011750589999999867985999878876336750851176899689999999999985 Q ss_pred -----HHHHCCC-----CHHHHHHHHC----CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf -----8882687-----7889998723----5310235443321047469898989998874105853347542467531 Q gi|254780859|r 432 -----ADLVSGQ-----HPFFKKLQEA----TRPLIIVGQGALRASDNVEVMANIAKLVIDVGGISDSWNGFAVLHTVAS 497 (700) Q Consensus 432 -----~~~~~g~-----~~~~~~l~~a----~~~~ii~G~g~~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~~L~~~~n 497 (700) T Consensus 241 ytpe~v~~itGvp~~~i~~~A~~~a~~~~~~k~~~i~~~mG~tqh~~G~~~vra~~~L~Ll~GniGrpG~G~~~lrGq~N 320 (649) T cd02752 241 YTPEEVEDICGVPKEDFLKVAEMFAATGRPDKPGTILYAMGWTQHTVGSQNIRAMCILQLLLGNIGVAGGGVNALRGHSN 320 (649) T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC T ss_conf 89999998779399999999999985667888528997363313200699999999999996899998988884889888 Q ss_pred CCCCHHCCCCCCCCCCCHHHHHHCCCEEEECCCCHH----------HCCCCCCEEEHHHHHHHHHHHHCC---------- Q ss_conf 045210177658652368888601675998076422----------016654345022116666887455---------- Q gi|254780859|r 498 RVGALDLGFVPADDTINAMNILDKTDIVFLLGADEL----------DFSDKQALTVYIGSHGDRGAQSAD---------- 557 (700) Q Consensus 498 ~~Ga~d~g~~P~~~~~~~~~~~~~~~~l~~~g~d~l----------~~~~~~~fvV~~d~~~t~tA~~AD---------- 557 (700) T Consensus 321 vQGa~d~g~l~~~l--P----------Gy~~G~NP~~s~p~~~~~~~al~kld~lVv~D~f~teta~~~~~~~~~~~~i~ 388 (649) T cd02752 321 VQGATDLGLLSHNL--P----------GYLGGQNPNSSFPNANKVRRALDKLDWLVVIDPFPTETAAFWKNPGMDPKSIQ 388 (649) T ss_pred CCCCCCCCCCCCCC--C----------CCCCCCCHHCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCCCCC T ss_conf 88864435575668--8----------63335174305858899999987799699958983567998753488842233 Q ss_pred ---EEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC-------------------CCCCCH Q ss_conf ---7704786202472088208867420443288555740799999999980779-------------------968798 Q gi|254780859|r 558 ---VILPGAAYTEKSGLWVNTEGRVQMGMRAIFPPGDAKEDWEIICALADELKCS-------------------LPFSSL 615 (700) Q Consensus 558 ---VVLP~a~~~Ek~Gtf~N~EgRvQ~~~~av~p~geak~dw~Il~~La~~LG~~-------------------~~~~~~ 615 (700) T Consensus 389 tev~~LPaa~~~EkeGt~tns~R~iq~~~kav~PpGeak~D~~I~~~l~~rlg~~y~~~~~~~~~~i~~~~~~~~~~~~~ 468 (649) T cd02752 389 TEVFLLPAACQYEKEGSITNSGRWLQWRYKVVEPPGEAKSDGDILVELAKRLGFLYEKEGGAFPEPITKWNYGYGDEPTP 468 (649) T ss_pred CCEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCH T ss_conf 43699357640105733551677012110136998455768999999999999999767898831220365568998999 Q ss_pred HHHHHHHH Q ss_conf 99999999 Q gi|254780859|r 616 SQLRSHLY 623 (700) Q Consensus 616 ~ei~~ei~ 623 (700) T Consensus 469 ~~v~~ein 476 (649) T cd02752 469 EEIAREIN 476 (649) T ss_pred HHHHHHHC T ss_conf 99999974

HHsearch alignment for GI: 254780859 and conserved domain: cd02752